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MicrobesOnline Operon Predictions
We have predicted operons in all of the genomes in the VIMSS database. These predictions are primarily based on
- comparative genomics, especially conserved gene order, and
- a genome-specific model of how compact operons are, relative to other same-strand pairs, which we infer from the comparative data
From databases of known operons and microarray data, we estimate that the method is at least 82% accurate in most genomes.
Accessing the predictions:
Publications:
Further information:
By Morgan N. Price,
Katherine H. Huang,
Eric J. Alm, and
Adam P. Arkin
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