Taxon Scaffold Gene1 Gene2 Consecutive Sep Code Strand1 Strand2 GNScore GNWithin GNAll GNMinus GOScore CAI CAI.Alm CBI COG COGanno COGfun Description nCAI nCAI.Alm nCBI nCOG nCOGanno nCOGfun nDescription COGsim forward forwardplus sumBias same bbfGNScore bbfGNMinus bbfGNWithin bbfGNAll bbfGOScore COGsimClass cfCOG pSame groupIndexD pSameD pOpLogistic pOpDistance pOp1 bOp1 pCAI pOp bOp pOp2 pSame pOpLogisticLike pOpLogisticM 206672 7164 280282 280283 1 238 Same + + 1.7635886 0.00000000 0 5.224106e-01 117.7 2.204976 2.883372 0.9941186 1278 Cold shock proteins [Transcription] K cold shock protein 1.328755 1.830783 0.6008221 459 Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] O chaperone - TRUE TRUE 1 TRUE 1.1809389 1.6425249 0.4201221 0.8228004 0.9373018 N 0.787079 0.7863862 20.69 0.18268152 0.68855160 0.18086718 0.330720556 FALSE 0.5 0.330720556 FALSE 0.203612133 0.7863862 0.53355326 0.6147342 206672 7164 280285 280286 1 -7 Same + + 0.0000000 0.21791250 0 2.179125e-01 NA 3.569010 4.888952 1.0795887 - - - hypothetical protein 1.835655 2.539948 0.8391084 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK response regulator of two-component system TRUE TRUE 2 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.5528280 U 0.575520 0.7565067 0.80 0.91182498 0.63096557 0.91083926 0.946469427 TRUE 0.5 0.946469427 TRUE 0.904759151 0.7565067 0.47879659 0.5738558 206672 7164 280286 280287 1 172 Same + + 2.4608091 0.21791250 0 1.396811e+01 117.7 1.835655 2.539948 0.8391084 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK response regulator of two-component system 2.464453 3.344179 0.9669825 642 Signal transduction histidine kinase [Signal transduction mechanisms] T histidine kinase sensor of two-component system T TRUE TRUE 3 TRUE 1.8073321 2.1405615 1.6513766 0.8228004 0.9373018 Y 2.627081 0.9410709 17.88 0.34057889 0.92820401 0.33784458 0.869745159 TRUE 0.5 0.869745159 TRUE 0.685166781 0.9410709 0.80819666 0.8737645 206672 7164 280287 280288 1 70 Same + + 0.0000000 0.21791250 0 -1.515252e+00 117.7 2.464453 3.344179 0.9669825 642 Signal transduction histidine kinase [Signal transduction mechanisms] T histidine kinase sensor of two-component system 2.478078 3.403154 1.0199770 1278 Cold shock proteins [Transcription] K cold shock protein - TRUE TRUE 4 TRUE 0.5005257 0.3462616 1.6513766 0.8228004 0.9373018 N 0.787079 0.6752688 10.81 0.56654625 0.44863402 0.56354818 0.515390703 TRUE 0.5 0.515390703 TRUE 0.388405829 0.6752688 0.32699853 0.4740462 206672 7164 280288 280289 1 9 Same + + 2.0222831 0.21791250 0 -1.588974e-01 NA 2.478078 3.403154 1.0199770 1278 Cold shock proteins [Transcription] K cold shock protein 2.182661 3.000261 0.9322957 - - - narrowly conserved hypothetical protein TRUE TRUE 5 TRUE 1.3213143 0.2449790 1.6513766 0.8228004 0.5528280 U 0.575520 0.6647919 4.60 0.84222695 0.42187526 0.84059919 0.795729128 TRUE 0.5 0.795729128 TRUE 0.702910826 0.6647919 0.30710384 0.4622471 206672 7164 280293 280294 1 190 Same + + 0.0000000 0.01104984 0 -9.420099e-01 NA 3.294653 4.624388 1.0709829 - - - hypothetical protein weakly similar to putative transcriptional regulator from Streptomyces 1.997293 2.693937 0.8953425 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G proline/betaine transporter TRUE TRUE 6 TRUE 0.5005257 0.3031593 0.7590838 0.8228004 0.5528280 U 0.575520 0.5642479 18.90 0.29031221 0.11455359 0.28780533 0.050262929 FALSE 0.5 0.050262929 FALSE 0.049232504 0.5642479 0.11236110 0.3594846 206672 7164 280294 280295 1 86 Same + + 4.2766661 0.01104984 0 -1.575991e+00 117.7 1.997293 2.693937 0.8953425 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G proline/betaine transporter 2.109210 2.916651 0.9419010 1402 Uncharacterized protein, putative amidase [General function prediction only] R creatinine amidohydrolase; creatininase TRUE TRUE 7 TRUE 2.1955104 0.3499344 0.7590838 0.8228004 0.9373018 U 0.575520 0.6984926 12.14 0.54927824 0.50508688 0.54625639 0.554310660 TRUE 0.5 0.554310660 TRUE 0.418027726 0.6984926 0.37083649 0.5010270 206672 7164 280295 280296 1 172 Same + + 0.0000000 -4.51085951 0 -1.265754e+00 117.7 2.109210 2.916651 0.9419010 1402 Uncharacterized protein, putative amidase [General function prediction only] R creatinine amidohydrolase; creatininase 3.432324 4.684105 1.0728175 737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] F 5'-nucleotidase family protein TRUE TRUE 8 TRUE 0.5005257 0.3221956 0.4892871 0.8228004 0.9373018 U 0.575520 0.5781693 17.88 0.34057889 0.16348082 0.33784458 0.091681926 FALSE 0.5 0.091681926 FALSE 0.077406117 0.5781693 0.13974521 0.3726747 206672 7164 280298 280299 1 36 Same + + 72.9568848 0.21791250 0 2.729587e+02 79.0 1.906764 2.643939 0.9065866 124 Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J histidyl-tRNA synthetase 1.467796 2.008583 0.6899312 173 Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J aspartyl-tRNA synthetase J TRUE TRUE 9 TRUE 3.5942601 3.3177348 1.6513766 0.8228004 1.3194784 Y 2.627081 0.9823972 7.51 0.62970191 0.97945586 0.62685296 0.987815842 TRUE 0.5 0.987815842 TRUE 0.925217870 0.9823972 0.87916133 0.9603008 206672 7164 280301 280302 1 64 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 6.254263 8.143439 1.0180451 - - - hypothetical protein 1.713381 2.357516 0.8142022 1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] E ATP-binding protein of ABC transporter for glutamate TRUE TRUE 10 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 10.18 0.56980657 0.04798152 0.56681381 0.062578772 FALSE 0.5 0.062578772 FALSE 0.099438989 0.5463485 0.07694943 0.3429683 206672 7164 280302 280303 1 71 Same + + 54.8159127 0.21791250 0 2.228525e+02 117.7 1.713381 2.357516 0.8142022 1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] E ATP-binding protein of ABC transporter for glutamate 1.513053 1.998670 0.6848511 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET glutamate-binding protein of ABC transporter system E TRUE TRUE 11 TRUE 3.4827994 3.2623879 1.6513766 0.8228004 0.9373018 Y 2.627081 0.9789802 10.90 0.56473387 0.97538233 0.56173296 0.980918347 TRUE 0.5 0.980918347 TRUE 0.899450607 0.9789802 0.87333110 0.9528006 206672 7164 280303 280304 1 0 Same + + 27.6537404 0.21791250 0 1.441628e+02 110.0 1.513053 1.998670 0.6848511 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET glutamate-binding protein of ABC transporter system 1.863653 2.582200 0.8395434 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E permease protein of ABC transporter for glutamate E TRUE TRUE 12 TRUE 3.1735337 3.0928781 1.6513766 0.8228004 0.7921065 Y 2.627081 0.9738932 2.87 0.89280330 0.96926482 0.89163020 0.996207124 TRUE 0.5 0.996207124 TRUE 0.981549956 0.9738932 0.86463883 0.9417547 206672 7164 280304 280305 1 6 Same + + 2.4129332 0.21791250 0 3.785970e+01 12.0 1.863653 2.582200 0.8395434 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E permease protein of ABC transporter for glutamate 1.827694 2.576757 0.8292754 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E permease protein of ABC transporter for glutamate E TRUE TRUE 13 TRUE 1.6266309 2.4644638 1.6513766 0.8228004 2.3795296 Y 2.627081 0.9666034 4.15 0.85918035 0.96038615 0.85769795 0.993284877 TRUE 0.5 0.993284877 TRUE 0.972350741 0.9666034 0.85215687 0.9261713 206672 7164 280305 280306 1 89 Same + + 0.0000000 0.01104984 0 -1.095782e-01 117.7 1.827694 2.576757 0.8292754 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E permease protein of ABC transporter for glutamate 2.541611 3.440994 0.9722663 - - - hypothetical secreted protein with probable acid phosphatase domain TRUE TRUE 14 TRUE 0.5005257 0.2410339 0.7590838 0.8228004 0.9373018 U 0.575520 0.5852386 12.46 0.54220165 0.18743505 0.53917216 0.214576915 FALSE 0.5 0.214576915 FALSE 0.176907378 0.5852386 0.15359852 0.3794918 206672 7164 280306 280307 1 545 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.541611 3.440994 0.9722663 - - - hypothetical secreted protein with probable acid phosphatase domain 3.219612 4.110442 1.0352462 - - - hypothetical protein TRUE TRUE 15 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 24.10 0.07408696 0.04798152 0.07325449 0.004016542 FALSE 0.5 0.004016542 FALSE 0.006626194 0.5463485 0.07694943 0.3429683 206672 7164 280307 280308 1 213 Same + + 0.0000000 0.01104984 0 1.104984e-02 NA 3.219612 4.110442 1.0352462 - - - hypothetical protein 2.482573 3.391474 0.9564889 2326 Uncharacterized conserved protein [Function unknown] S narrowly conserved hypothetical protein TRUE TRUE 16 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.5528280 U 0.575520 0.6376114 19.70 0.23501032 0.34835488 0.23282431 0.141060293 FALSE 0.5 0.141060293 FALSE 0.095212462 0.6376114 0.25514522 0.4326592 206672 7164 280308 280309 1 134 Same + + 0.0000000 0.21791250 0 -1.770687e+00 NA 2.482573 3.391474 0.9564889 2326 Uncharacterized conserved protein [Function unknown] S narrowly conserved hypothetical protein 1.878450 2.558564 0.8312717 1061 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] KL probable DEAD box-like helicase TRUE TRUE 17 TRUE 0.5005257 0.4018454 1.6513766 0.8228004 0.5528280 U 0.575520 0.6375045 15.63 0.41202822 0.34805339 0.40907614 0.272258509 FALSE 0.5 0.272258509 FALSE 0.193406738 0.6375045 0.25493991 0.4325456 206672 7164 280309 280310 1 83 Same + + 0.0000000 0.21791250 0 -3.700205e+00 117.7 1.878450 2.558564 0.8312717 1061 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] KL probable DEAD box-like helicase 2.478527 3.427168 0.9602716 2256 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] L widely conserved hypothetical protein with possible helicase and ATP binding domains L TRUE TRUE 18 TRUE 0.5005257 0.5436792 1.6513766 0.8228004 0.9373018 Y 2.627081 0.8209513 11.94 0.55226867 0.74993868 0.54925042 0.787199499 TRUE 0.5 0.787199499 TRUE 0.645535230 0.8209513 0.59619351 0.6652511 206672 7164 280310 280311 1 58 Same + + 0.0000000 0.01104984 0 -6.748205e+00 117.7 2.478527 3.427168 0.9602716 2256 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] L widely conserved hypothetical protein with possible helicase and ATP binding domains 2.433861 3.373045 0.9707145 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK response regulator of two-component system - TRUE TRUE 19 TRUE 0.5005257 0.6870884 0.7590838 0.8228004 0.9373018 N 0.787079 0.6631693 9.52 0.56991470 0.41765548 0.56692212 0.487277194 FALSE 0.5 0.487277194 FALSE 0.366620473 0.6631693 0.30401612 0.4604398 206672 7164 280311 280312 1 -3 Same + + 2.4129332 0.01104984 0 6.338742e+01 117.7 2.433861 3.373045 0.9707145 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK response regulator of two-component system 3.040561 4.272852 1.0698517 642 Signal transduction histidine kinase [Signal transduction mechanisms] T histidine kinase sensor of two-component system T TRUE TRUE 20 TRUE 1.6266309 2.8076748 0.7590838 0.8228004 0.9373018 Y 2.627081 0.9456531 1.71 0.90812607 0.93410753 0.90710321 0.992914072 TRUE 0.5 0.992914072 TRUE 0.977712788 0.9456531 0.81611384 0.8829292 206672 7164 280312 280313 1 -3 Same + + 2.4129332 0.00000000 0 4.938219e+01 NA 3.040561 4.272852 1.0698517 642 Signal transduction histidine kinase [Signal transduction mechanisms] T histidine kinase sensor of two-component system 3.567064 4.955847 1.1272829 - - - hypothetical protein TRUE TRUE 21 TRUE 1.6266309 2.6352710 0.4201221 0.8228004 0.5528280 U 0.575520 0.8564237 1.71 0.90812607 0.80778515 0.90710321 0.976492516 TRUE 0.5 0.976492516 TRUE 0.950402986 0.8564237 0.65970718 0.7210903 206672 7164 280313 280314 1 316 Same + + 0.0000000 0.00000000 0 -2.405078e+00 NA 3.567064 4.955847 1.1272829 - - - hypothetical protein 1.567598 2.071417 0.7117945 1879 ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism] G probable solute binding protein of ABC transporter system possibly for sugars TRUE TRUE 22 TRUE 0.5005257 0.4604604 0.4201221 0.8228004 0.5528280 U 0.575520 0.5630567 22.13 0.12545258 0.11025478 0.12412030 0.017465293 FALSE 0.5 0.017465293 FALSE 0.017422764 0.5630567 0.11001160 0.3583702 206672 7164 280314 280315 1 141 Same + + 38.0967496 0.00000000 0 3.247676e+02 NA 1.567598 2.071417 0.7117945 1879 ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism] G probable solute binding protein of ABC transporter system possibly for sugars 1.720680 2.311230 0.7966928 1129 ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] G ATP binding protein of ABC transporter G TRUE TRUE 23 TRUE 3.3128708 3.3665945 0.4201221 0.8228004 0.5528280 Y 2.627081 0.9674302 16.12 0.39901977 0.96139995 0.39609811 0.942976930 TRUE 0.5 0.942976930 TRUE 0.794678812 0.9674302 0.85357419 0.9279245 206672 7164 280315 280316 1 2 Same + + 39.4546445 0.00000000 0 3.961192e+02 117.7 1.720680 2.311230 0.7966928 1129 ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] G ATP binding protein of ABC transporter 1.893117 2.590627 0.8808519 1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism] G probable ABC transport system permease protein for sugars G TRUE TRUE 24 TRUE 3.3275954 3.4726301 0.4201221 0.8228004 0.9373018 Y 2.627081 0.9728045 3.38 0.88188293 0.96794738 0.88060631 0.995584382 TRUE 0.5 0.995584382 TRUE 0.979141818 0.9728045 0.86277679 0.9394094 206672 7164 280316 280317 1 -3 Same + + 31.9731133 0.01104984 0 3.127593e+02 91.0 1.893117 2.590627 0.8808519 1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism] G probable ABC transport system permease protein for sugars 1.705410 2.333366 0.8391305 1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism] G probable ABC transporter permease protein for sugars G TRUE TRUE 25 TRUE 3.2394088 3.3456056 0.7590838 0.8228004 1.0407775 Y 2.627081 0.9736460 1.71 0.90812607 0.96896601 0.90710321 0.996770239 TRUE 0.5 0.996770239 TRUE 0.984353300 0.9736460 0.86421619 0.9412218 206672 7164 280319 280320 1 104 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.646017 3.638884 0.9898511 111 Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] E conserved protein with hydroxyacid dehydrogenase catalytic domain 3.783804 5.354190 1.0389579 - - - hypothetical protein TRUE TRUE 26 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 13.56 0.49783367 0.04798152 0.49478416 0.047587235 FALSE 0.5 0.047587235 FALSE 0.076336193 0.5463485 0.07694943 0.3429683 206672 7164 280323 280324 1 33 Same - - 0.0000000 0.20686267 0 2.068627e-01 117.7 1.932880 2.653667 0.8807101 1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Translation, ribosomal structure and biogenesis] J narrowly conserved hypothetical protein in upf 0044 2.578230 3.595145 1.0139677 1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] R possible fused ATP binding protein and permease of ABC transporter FALSE TRUE 26 TRUE 0.5005257 1.1250278 1.0425778 0.8228004 0.9373018 U 0.575520 0.7169562 7.29 0.64583995 0.54735908 0.64304478 0.688004947 TRUE 0.5 0.688004947 TRUE 0.554267935 0.7169562 0.40543425 0.5233308 206672 7164 280324 280325 1 131 Same - - 0.0000000 0.20686267 0 2.068627e-01 NA 2.578230 3.595145 1.0139677 1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] R possible fused ATP binding protein and permease of ABC transporter 2.100787 2.915572 0.9169458 3601 Predicted membrane protein [Function unknown] S narrowly conserved hypothetical protein FALSE TRUE 25 TRUE 0.5005257 1.1250278 1.0425778 0.8228004 0.5528280 U 0.575520 0.6916772 15.36 0.42257215 0.48891288 0.41959843 0.411787936 FALSE 0.5 0.411787936 FALSE 0.289823649 0.6916772 0.35800872 0.4929880 206672 7164 280328 280329 1 225 Same + + 0.0000000 -4.30399684 0 2.179125e-01 117.7 1.696692 2.272604 0.8011653 1940 Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] KG similar to Mycobacterium tuberculosis polyphosphate glucokinase (polyphosphate-glucose phosphotransferase) also similar to members of ROK family of transcriptional regulators 3.047809 4.245323 1.0635217 436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] E probable aminotransferase - TRUE TRUE 25 TRUE 0.5005257 1.3964727 0.4621201 0.8228004 0.9373018 N 0.787079 0.7311039 20.17 0.20705228 0.57830523 0.20505662 0.263672743 FALSE 0.5 0.263672743 FALSE 0.165574296 0.7311039 0.43179343 0.5409601 206672 7164 280329 280330 1 9 Same + + 0.0000000 0.21791250 0 2.179125e-01 117.7 3.047809 4.245323 1.0635217 436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] E probable aminotransferase 3.088635 4.225253 0.9801829 1122 ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] P ATP binding protein of ABC transporter - TRUE TRUE 26 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.9373018 N 0.787079 0.7913345 4.60 0.84222695 0.69766852 0.84059919 0.924917148 TRUE 0.5 0.924917148 TRUE 0.863606325 0.7913345 0.54256665 0.6217461 206672 7164 280332 280333 1 65 Same + + 0.0000000 0.21791250 0 2.179125e-01 117.7 2.698641 3.695325 1.0106737 - - - hypothetical protein 2.128735 2.937304 0.9182386 272 NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] L DNA ligase TRUE TRUE 27 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.9373018 U 0.575520 0.7781751 10.34 0.57032264 0.67316710 0.56733075 0.732180182 TRUE 0.5 0.732180182 TRUE 0.588423167 0.7781751 0.51856222 0.6032538 206672 7164 280333 280334 1 176 Same + + 0.0000000 0.21791250 0 1.573344e-01 NA 2.128735 2.937304 0.9182386 272 NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] L DNA ligase 1.982630 2.760842 0.9110529 489 ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] D hypothetical protein with duf059 and 4Fe-4S iron sulfur cluster binding domain - TRUE TRUE 28 TRUE 0.5005257 1.0458244 1.6513766 0.8228004 0.5528280 N 0.787079 0.7332011 18.13 0.33019301 0.58279104 0.32750067 0.407799225 FALSE 0.5 0.407799225 FALSE 0.275681342 0.7332011 0.43568981 0.5436146 206672 7164 280336 280337 1 111 Same + + 0.0000000 0.01104984 0 -9.073286e-02 117.7 1.863727 2.474595 0.7626589 395 ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism] G sugar permease of ABC transporter system 2.998243 4.128404 1.0276120 - - - possible beta-hexosaminidase A TRUE TRUE 29 TRUE 0.5005257 0.2384155 0.7590838 0.8228004 0.9373018 U 0.575520 0.5848749 13.99 0.48052017 0.18621685 0.47747587 0.174690758 FALSE 0.5 0.174690758 FALSE 0.143060937 0.5848749 0.15288670 0.3791391 206672 7164 280337 280338 1 1003 Same + + 0.0000000 -4.51085951 0 -4.510860e+00 117.7 2.998243 4.128404 1.0276120 - - - possible beta-hexosaminidase A 1.683183 2.293461 0.7598456 1250 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] I possible butyryl-CoA dehydrogenase TRUE TRUE 30 TRUE 0.5005257 0.5932593 0.4892871 0.8228004 0.9373018 U 0.575520 0.6154668 24.70 0.06352087 0.28365545 0.06279907 0.026156328 FALSE 0.5 0.026156328 FALSE 0.017967908 0.6154668 0.21244032 0.4095874 206672 7164 280338 280339 1 179 Same + + 0.0000000 0.00000000 0 -2.000260e-01 NA 1.683183 2.293461 0.7598456 1250 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] I possible butyryl-CoA dehydrogenase 1.538418 2.090875 0.7066336 - - - narrowly conserved hypothetical protein TRUE TRUE 31 TRUE 0.5005257 0.2492522 0.4201221 0.8228004 0.5528280 U 0.575520 0.5331351 18.32 0.32171830 0.01949129 0.31906215 0.009340694 FALSE 0.5 0.009340694 FALSE 0.024686689 0.5331351 0.05066107 0.3310838 206672 7164 280339 280340 1 52 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.538418 2.090875 0.7066336 - - - narrowly conserved hypothetical protein 2.484694 3.290664 0.9892944 - - - hypothetical protein with limited similarity to C-terminal part of trans-aconitate methyltransferase TRUE TRUE 32 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 8.91 0.58376617 0.04798152 0.58079908 0.066018892 FALSE 0.5 0.066018892 FALSE 0.104679140 0.5463485 0.07694943 0.3429683 206672 7164 280343 280344 1 -3 Same - - 17.6946797 0.21791250 0 1.075911e+02 NA 2.068829 2.895183 0.8847799 390 ABC-type uncharacterized transport system, permease component [General function prediction only] R hypothetical transmembrane protein with unknown function 2.092089 2.871910 0.8438552 1136 ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] V ATP binding protein of ABC transporter FALSE TRUE 32 TRUE 2.8767157 3.0331582 1.6513766 0.8228004 0.5528280 U 0.575520 0.9357025 1.71 0.90812607 0.92121400 0.90710321 0.991421859 TRUE 0.5 0.991421859 TRUE 0.975166947 0.9357025 0.79890542 0.8631561 206672 7164 280345 280346 1 55 Same + + 6.1506028 0.01104984 0 2.343792e+01 117.7 1.300074 1.721098 0.6690336 231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) [Translation, ribosomal structure and biogenesis] J elongation factor P 2.032805 2.809695 0.9466646 781 Transcription termination factor [Transcription] K NusB antitermination protein - TRUE TRUE 32 TRUE 2.3579962 2.3069354 0.7590838 0.8228004 0.9373018 N 0.787079 0.8888753 9.16 0.57819115 0.85666156 0.57521324 0.891212516 TRUE 0.5 0.891212516 TRUE 0.776549769 0.8888753 0.71714015 0.7761347 206672 7164 280346 280347 1 191 Same + + 2.2512918 0.01104984 0 -2.541502e+00 117.7 2.032805 2.809695 0.9466646 781 Transcription termination factor [Transcription] K NusB antitermination protein 1.489887 1.997265 0.7011665 505 Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] EF carbamoyl-phosphate synthase small chain - TRUE TRUE 33 TRUE 1.4432824 0.4721421 0.7590838 0.8228004 0.9373018 N 0.787079 0.6890297 18.96 0.28639911 0.48254367 0.28391250 0.272338296 FALSE 0.5 0.272338296 FALSE 0.179647169 0.6890297 0.35301735 0.4898926 206672 7164 280347 280348 1 2 Same + + 210.4224592 0.21791250 0 1.393086e+03 2.0 1.489887 1.997265 0.7011665 505 Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] EF carbamoyl-phosphate synthase small chain 1.326306 1.803596 0.5969865 458 Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] EF carbamoyl-phosphate synthase large chain EF TRUE TRUE 34 TRUE 4.1265361 3.9143003 1.6513766 0.8228004 2.8650285 Y 2.627081 0.9932240 3.38 0.88188293 0.99217802 0.88060631 0.998945200 TRUE 0.5 0.998945200 TRUE 0.984948635 0.9932240 0.89759080 0.9845040 206672 7164 280348 280349 1 0 Same + + 2.4608091 0.21791250 0 4.978226e+01 117.7 1.326306 1.803596 0.5969865 458 Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] EF carbamoyl-phosphate synthase large chain 2.291627 3.102840 0.9482513 284 Orotidine-5'-phosphate decarboxylase [Nucleotide transport and metabolism] F similar to orotidine 5'-phosphate decarboxylase F TRUE TRUE 35 TRUE 1.8073321 2.6473442 1.6513766 0.8228004 0.9373018 Y 2.627081 0.9552396 2.87 0.89280330 0.94627521 0.89163020 0.993229318 TRUE 0.5 0.993229318 TRUE 0.976434894 0.9552396 0.83263805 0.9024383 206672 7164 280349 280350 1 180 Same + + 2.4608091 0.21791250 0 3.249477e+01 117.7 2.291627 3.102840 0.9482513 284 Orotidine-5'-phosphate decarboxylase [Nucleotide transport and metabolism] F similar to orotidine 5'-phosphate decarboxylase 1.728426 2.457178 0.8745732 194 Guanylate kinase [Nucleotide transport and metabolism] F guanylate kinase F TRUE TRUE 36 TRUE 1.8073321 2.4017328 1.6513766 0.8228004 0.9373018 Y 2.627081 0.9488317 18.41 0.31746208 0.93816928 0.31482476 0.875889807 TRUE 0.5 0.875889807 TRUE 0.681735176 0.9488317 0.82159878 0.8893472 206672 7164 280354 280355 1 -13 Same + + 46.5292557 0.21791250 0 1.933523e+02 12.0 3.071042 4.270469 1.0387001 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E permease protein of ABC transporter system 2.743838 3.831484 1.0280959 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E permease of ABC transporter system for amino acids E TRUE TRUE 37 TRUE 3.3939819 3.1871542 1.6513766 0.8228004 2.3795296 Y 2.627081 0.9856681 0.48 0.91163686 0.98332886 0.91064924 0.998359400 TRUE 0.5 0.998359400 TRUE 0.987529649 0.9856681 0.88473616 0.9675420 206672 7164 280355 280356 1 -7 Same + + 37.2638144 0.21791250 0 1.021484e+02 117.7 2.743838 3.831484 1.0280959 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E permease of ABC transporter system for amino acids 2.153102 2.961730 0.8987908 1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] E ATP binding protein of ABC transporter for glutamate/aspartate E TRUE TRUE 38 TRUE 3.3055125 3.0134075 1.6513766 0.8228004 0.9373018 Y 2.627081 0.9747475 0.80 0.91182498 0.97029663 0.91083926 0.997048441 TRUE 0.5 0.997048441 TRUE 0.985269981 0.9747475 0.86609961 0.9435998 206672 7164 280356 280357 1 66 Same + + 34.2336807 0.21791250 0 8.448457e+01 117.7 2.153102 2.961730 0.8987908 1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] E ATP binding protein of ABC transporter for glutamate/aspartate 1.659723 2.217715 0.7920869 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET probable solute-binding protein for glutamate/aspartate ABC transporter system E TRUE TRUE 39 TRUE 3.2614187 2.9481398 1.6513766 0.8228004 0.9373018 Y 2.627081 0.9735227 10.46 0.57031005 0.96881677 0.56731814 0.976323507 TRUE 0.5 0.976323507 TRUE 0.893982136 0.9735227 0.86400517 0.9409558 206672 7164 280357 280358 1 236 Same + + 0.0000000 -6.18820862 0 -1.078298e+00 117.7 1.659723 2.217715 0.7920869 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET probable solute-binding protein for glutamate/aspartate ABC transporter system 2.271943 3.125572 0.9580131 626 Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism] E cystathionine beta-lyase E TRUE TRUE 40 TRUE 0.5005257 0.3104945 0.5242227 0.8228004 0.9373018 Y 2.627081 0.7453586 20.64 0.18498394 0.60829728 0.18315185 0.260614275 FALSE 0.5 0.260614275 FALSE 0.161048396 0.7453586 0.45822033 0.5592175 206672 7164 280358 280359 1 244 Same + + 0.0000000 0.01104984 0 -7.856232e-02 117.7 2.271943 3.125572 0.9580131 626 Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism] E cystathionine beta-lyase 2.112389 2.830269 0.9686902 695 Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones] O hypothetical protein with homology to glutaredoxin-like protein - TRUE TRUE 41 TRUE 0.5005257 0.2375690 0.7590838 0.8228004 0.9373018 N 0.787079 0.6035452 20.95 0.17091567 0.24685842 0.16919399 0.063293351 FALSE 0.5 0.063293351 FALSE 0.045928532 0.6035452 0.18930991 0.3975310 206672 7164 280360 280361 1 81 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 3.575038 4.914029 1.0541431 1959 Predicted transcriptional regulator [Transcription] K conserved hypothetical protein in upf0074 6.220305 8.136795 1.0772706 - - - hypothetical protein FALSE TRUE 41 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 11.76 0.55436918 0.04798152 0.55135358 0.058998728 FALSE 0.5 0.058998728 FALSE 0.093961588 0.5463485 0.07694943 0.3429683 206672 7164 280362 280363 1 160 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.264816 3.119477 1.0449369 - - - hypothetical protein 1.627001 2.198922 0.7746296 330 Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] O narrowly conserved hypothetical protein TRUE TRUE 41 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 17.00 0.37679940 0.04798152 0.37393920 0.029571574 FALSE 0.5 0.029571574 FALSE 0.047985055 0.5463485 0.07694943 0.3429683 206672 7164 280364 280365 1 144 Same - - 0.0000000 0.21791250 0 -2.419717e+00 117.7 1.874088 2.489639 0.8065486 4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] R conserved hypothetical protein 2.384641 3.290430 0.9149636 796 Glutamate racemase [Cell envelope biogenesis, outer membrane] M glutamate racemase FALSE TRUE 41 TRUE 0.5005257 0.4630320 1.6513766 0.8228004 0.9373018 U 0.575520 0.6728268 16.25 0.39633291 0.44247127 0.39341804 0.342559970 FALSE 0.5 0.342559970 FALSE 0.237999315 0.6728268 0.32236784 0.4712757 206672 7164 280369 280370 1 7 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 6.283203 8.478219 1.1022010 - - - hypothetical protein 2.819866 3.835199 1.0636250 - - - hypothetical protein FALSE TRUE 40 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 4.31 0.85394954 0.04798152 0.85242154 0.227611287 FALSE 0.5 0.227611287 FALSE 0.327697896 0.5463485 0.07694943 0.3429683 206672 7164 280373 280374 1 116 Same + + 0.0000000 0.21791250 0 -3.744519e-01 NA 2.581762 3.527232 0.9819579 - - - hypothetical protein 1.990358 2.734132 0.9749007 - - - narrowly conserved hypothetical protein TRUE TRUE 40 TRUE 0.5005257 0.2641121 1.6513766 0.8228004 0.5528280 U 0.575520 0.6191037 14.40 0.46450845 0.29459911 0.46147548 0.265932951 FALSE 0.5 0.265932951 FALSE 0.196088824 0.6191037 0.21947718 0.4133155 206672 7164 280374 2194465 1 164 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.990358 2.734132 0.9749007 - - - narrowly conserved hypothetical protein NA NA NA TRUE TRUE 41 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 17.40 0.35983439 0.04798152 0.35702919 0.027549049 FALSE 0.5 0.027549049 FALSE 0.044761244 0.5463485 0.07694943 0.3429683 206672 7164 2194465 280375 1 232 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA NA NA NA 2.856269 3.904108 1.0377943 - - - hypothetical protein TRUE TRUE 42 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 20.37 0.19752726 0.04798152 0.19560076 0.012253797 FALSE 0.5 0.012253797 FALSE 0.020107363 0.5463485 0.07694943 0.3429683 206672 7164 280375 280376 1 -3 Same + + 0.0000000 0.21791250 0 2.179125e-01 NA 2.856269 3.904108 1.0377943 - - - hypothetical protein 2.306666 3.190526 0.9423357 743 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism] I 1-deoxy-D-xylulose 5-phosphate reductoisomerase TRUE TRUE 43 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.5528280 U 0.575520 0.7565067 1.71 0.90812607 0.63096557 0.90710321 0.944134796 TRUE 0.5 0.944134796 TRUE 0.900796077 0.7565067 0.47879659 0.5738558 206672 7164 280376 280377 1 9 Same + + 72.6267912 0.21791250 0 -2.298513e+01 117.7 2.306666 3.190526 0.9423357 743 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism] I 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1.772211 2.410786 0.7919940 821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis [Lipid metabolism] I 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1 I TRUE TRUE 44 TRUE 3.5868154 0.8497639 1.6513766 0.8228004 0.9373018 Y 2.627081 0.9232450 4.60 0.84222695 0.90468031 0.84059919 0.980644571 TRUE 0.5 0.980644571 TRUE 0.949057709 0.9232450 0.77727983 0.8390604 206672 7164 280377 280378 1 55 Same + + 0.0000000 0.21791250 0 2.179125e-01 NA 1.772211 2.410786 0.7919940 821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis [Lipid metabolism] I 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1 2.574661 3.570078 1.0039996 - - - hypothetical protein with possible acylase domain TRUE TRUE 45 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.5528280 U 0.575520 0.7565067 9.16 0.57819115 0.63096557 0.57521324 0.700926492 TRUE 0.5 0.700926492 TRUE 0.557368189 0.7565067 0.47879659 0.5738558 206672 7164 280378 280379 1 50 Same + + 0.0000000 0.21791250 0 2.179125e-01 NA 2.574661 3.570078 1.0039996 - - - hypothetical protein with possible acylase domain 3.014809 4.212493 1.0422435 1381 Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] L conserved hypothetical protein TRUE TRUE 46 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.5528280 U 0.575520 0.7565067 8.71 0.58733423 0.63096557 0.58437446 0.708749286 TRUE 0.5 0.708749286 TRUE 0.566624312 0.7565067 0.47879659 0.5738558 206672 7164 280379 280380 1 -3 Same + + 2.4608091 0.21791250 0 6.585559e+01 117.7 3.014809 4.212493 1.0422435 1381 Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] L conserved hypothetical protein 1.938641 2.623353 0.8234844 20 Undecaprenyl pyrophosphate synthase [Lipid metabolism] I undecaprenyl pyrophosphate synthetase - TRUE TRUE 47 TRUE 1.8073321 2.8265731 1.6513766 0.8228004 0.9373018 N 0.787079 0.9231149 1.71 0.90812607 0.90450535 0.90710321 0.989431827 TRUE 0.5 0.989431827 TRUE 0.971792207 0.9231149 0.77705358 0.8388126 206672 7164 280381 280382 1 124 Same - - 0.0000000 0.20686267 0 2.068627e-01 NA 5.270772 7.297785 1.0554808 1957 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism] F possible inosine-uridine preferring nucleoside hydrolase 1.548977 2.017133 0.6742852 715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] P possible solute binding protein of ABC transporter - FALSE TRUE 47 TRUE 0.5005257 1.1250278 1.0425778 0.8228004 0.5528280 N 0.787079 0.7080427 15.02 0.43722021 0.52722715 0.43422093 0.464202597 FALSE 0.5 0.464202597 FALSE 0.330709227 0.7080427 0.38875997 0.5124662 206672 7164 280382 280383 1 259 Same - - 63.6790376 0.21791250 0 2.297234e+02 91.0 1.548977 2.017133 0.6742852 715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] P possible solute binding protein of ABC transporter 2.279005 3.117788 0.9516408 600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] P possible permease protein of ABC transporter system P FALSE TRUE 46 TRUE 3.5273283 3.2761751 1.6513766 0.8228004 1.0407775 Y 2.627081 0.9800233 21.28 0.15671503 0.97662882 0.15510964 0.885920061 TRUE 0.5 0.885920061 TRUE 0.565632697 0.9800233 0.87511153 0.9550832 206672 7164 280383 280384 1 196 Same - - 0.0000000 -1.66629928 0 -1.430726e+00 117.7 2.279005 3.117788 0.9516408 600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] P possible permease protein of ABC transporter system 1.499776 1.997284 0.6910829 1621 Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] G beta-fructofuranosidase (sucrase/invertase); possible inulinase - FALSE TRUE 45 TRUE 0.5005257 0.3373357 0.4216961 0.8228004 0.9373018 N 0.787079 0.5945815 19.09 0.27760199 0.21821933 0.27516231 0.096873078 FALSE 0.5 0.096873078 FALSE 0.073854339 0.5945815 0.17185333 0.3886277 206672 7164 280384 280385 1 11 Same - - 4.3307333 0.20686267 0 1.784258e+01 117.7 1.499776 1.997284 0.6910829 1621 Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] G beta-fructofuranosidase (sucrase/invertase); possible inulinase 1.889785 2.513800 0.7998638 2807 Cyanate permease [Inorganic ion transport and metabolism] P sucrose transport protein - FALSE TRUE 44 TRUE 2.2055728 2.2361631 1.0425778 0.8228004 0.9373018 N 0.787079 0.8888601 4.90 0.82584160 0.85663960 0.82408010 0.965910881 TRUE 0.5 0.965910881 TRUE 0.923198937 0.8888601 0.71711353 0.7761081 206672 7164 280385 280386 1 50 Same - - 4.3307333 0.20686267 0 -6.746382e-02 117.7 1.889785 2.513800 0.7998638 2807 Cyanate permease [Inorganic ion transport and metabolism] P sucrose transport protein 2.303453 3.152979 0.9310886 1609 Transcriptional regulators [Transcription] K probable LacI-type transcriptional regulator - FALSE TRUE 43 TRUE 2.2055728 0.2362238 1.0425778 0.8228004 0.9373018 N 0.787079 0.7180667 8.71 0.58733423 0.54983225 0.58437446 0.634819503 TRUE 0.5 0.634819503 TRUE 0.494670006 0.7180667 0.40750800 0.5246973 206672 7164 280386 280387 1 44 Same - - 0.0000000 0.01104984 0 -6.426280e-01 117.7 2.303453 3.152979 0.9310886 1609 Transcriptional regulators [Transcription] K probable LacI-type transcriptional regulator 2.448637 3.287687 0.9479451 4826 Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones] O hypothetical protein with similarity to serine protease inhibitors - FALSE TRUE 42 TRUE 0.5005257 0.2852280 0.7590838 0.8228004 0.9373018 N 0.787079 0.6100510 8.08 0.60122603 0.26711754 0.59829775 0.354636511 FALSE 0.5 0.354636511 FALSE 0.276156611 0.6100510 0.20194484 0.4040796 206672 7164 280387 280388 1 58 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.448637 3.287687 0.9479451 4826 Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones] O hypothetical protein with similarity to serine protease inhibitors 5.176563 7.200123 1.1898593 - - - hypothetical protein FALSE TRUE 41 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 9.52 0.56991470 0.04798152 0.56692212 0.062604657 FALSE 0.5 0.062604657 FALSE 0.099478502 0.5463485 0.07694943 0.3429683 206672 7164 280388 280389 1 53 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 5.176563 7.200123 1.1898593 - - - hypothetical protein 6.098407 8.194151 1.1563896 - - - hypothetical protein FALSE TRUE 40 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 8.99 0.58217046 0.04798152 0.57920019 0.065615328 FALSE 0.5 0.065615328 FALSE 0.104065584 0.5463485 0.07694943 0.3429683 206672 7164 280389 280390 1 265 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 6.098407 8.194151 1.1563896 - - - hypothetical protein 1.967363 2.733775 0.9297132 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G hypothetical metabolite transport protein possibly for a sugar FALSE TRUE 39 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 21.35 0.15383786 0.04798152 0.15225662 0.009079813 FALSE 0.5 0.009079813 FALSE 0.014929892 0.5463485 0.07694943 0.3429683 206672 7164 280390 280391 1 525 Same - - 0.0000000 -4.51085951 0 -1.770024e-01 NA 1.967363 2.733775 0.9297132 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G hypothetical metabolite transport protein possibly for a sugar 1.595504 2.198569 0.8212893 11 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein with Duf77 FALSE TRUE 38 TRUE 0.5005257 0.2462315 0.4892871 0.8228004 0.5528280 U 0.575520 0.5375191 24.02 0.07562835 0.01949129 0.07477995 0.001623758 FALSE 0.5 0.001623758 FALSE 0.005139959 0.5375191 0.05939719 0.3349986 206672 7164 280391 280392 1 51 Same - - 0.0000000 0.20686267 0 -2.822939e+00 NA 1.595504 2.198569 0.8212893 11 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein with Duf77 2.853642 3.837990 1.0179002 351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] H phosphomethylpyrimidine kinase FALSE TRUE 37 TRUE 0.5005257 0.5004944 1.0425778 0.8228004 0.5528280 U 0.575520 0.6107931 8.82 0.58542274 0.26940099 0.58245901 0.342406353 FALSE 0.5 0.342406353 FALSE 0.264988263 0.6107931 0.20338419 0.4048313 206672 7164 280392 280393 1 315 Same - - 0.0000000 0.00000000 0 -1.324523e-02 6.0 2.853642 3.837990 1.0179002 351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] H phosphomethylpyrimidine kinase 1.464967 1.962404 0.6600551 422 Thiamine biosynthesis protein ThiC [Coenzyme metabolism] H thiamine biosynthesis protein H FALSE TRUE 36 TRUE 0.5005257 0.2326293 0.4201221 0.8228004 2.7208953 Y 2.627081 0.8268839 22.09 0.12678229 0.75995879 0.12543792 0.314910728 FALSE 0.5 0.314910728 FALSE 0.183091641 0.8268839 0.60686981 0.6742959 206672 7164 280393 280394 1 83 Same - - 0.0000000 0.00000000 0 -1.324523e-02 6.0 1.464967 1.962404 0.6600551 422 Thiamine biosynthesis protein ThiC [Coenzyme metabolism] H thiamine biosynthesis protein 2.364296 3.261577 0.9583126 2145 Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] H hydroxyethylthiazole kinase H FALSE TRUE 35 TRUE 0.5005257 0.2326293 0.4201221 0.8228004 2.7208953 Y 2.627081 0.8268839 11.94 0.55226867 0.75995879 0.54925042 0.796132429 TRUE 0.5 0.796132429 TRUE 0.655660438 0.8268839 0.60686981 0.6742959 206672 7164 280395 280396 1 145 Same + + 6.1168378 -4.30399684 0 -4.499978e-01 117.7 1.356012 1.839209 0.6452034 423 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] J glycyl-tRNA synthetase 2.078453 2.832944 0.8572133 42 tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] J possible NifR3-like protein J TRUE TRUE 35 TRUE 2.3375159 0.2695289 0.4621201 0.8228004 0.9373018 Y 2.627081 0.8180244 16.30 0.39531526 0.74494164 0.39240301 0.656286697 TRUE 0.5 0.656286697 TRUE 0.485688644 0.8180244 0.59091823 0.6608306 206672 7164 280396 280397 1 112 Same + + 0.0000000 0.21791250 0 -1.144505e+01 117.7 2.078453 2.832944 0.8572133 42 tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] J possible NifR3-like protein 2.557000 3.481772 1.0052014 206 Cell division GTPase [Cell division and chromosome partitioning] D cell division protein FtsZ - TRUE TRUE 36 TRUE 0.5005257 0.7879988 1.6513766 0.8228004 0.9373018 N 0.787079 0.7280698 14.02 0.47945209 0.57177003 0.47640835 0.551526071 TRUE 0.5 0.551526071 TRUE 0.406173213 0.7280698 0.42615162 0.5371389 206672 7164 280397 280398 1 13 Same + + 16.1878642 0.21791250 0 4.513767e+01 NA 2.557000 3.481772 1.0052014 206 Cell division GTPase [Cell division and chromosome partitioning] D cell division protein FtsZ 2.517998 3.498384 0.9989901 1799 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein TRUE TRUE 37 TRUE 2.8337807 2.5933111 1.6513766 0.8228004 0.5528280 U 0.575520 0.9179744 5.23 0.80370346 0.89755015 0.80177180 0.972877632 TRUE 0.5 0.972877632 TRUE 0.931325725 0.9179744 0.76810299 0.8290794 206672 7164 280398 280399 1 122 Same + + 2.2823824 0.20686267 0 2.251644e+01 NA 2.517998 3.498384 0.9989901 1799 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein 3.599574 5.232289 1.0879134 - - - narrowly conserved hypothetical protein TRUE TRUE 38 TRUE 1.4639566 2.2959514 1.0425778 0.8228004 0.5528280 U 0.575520 0.8486841 14.85 0.44479110 0.79557635 0.44178066 0.757152788 TRUE 0.5 0.757152788 TRUE 0.593726618 0.8486841 0.64591533 0.7085383 206672 7164 280399 280400 1 140 Same + + 2.1747517 0.20686267 0 5.399820e+00 NA 3.599574 5.232289 1.0879134 - - - narrowly conserved hypothetical protein 1.801979 2.387257 0.7861242 - - - hypothetical protein TRUE TRUE 39 TRUE 1.3934814 1.9327093 1.0425778 0.8228004 0.5528280 U 0.575520 0.8173455 16.01 0.40142721 0.74377733 0.39849960 0.660645674 TRUE 0.5 0.660645674 TRUE 0.490795408 0.8173455 0.58969373 0.6598090 206672 7164 280400 280401 1 55 Same + + 1.7917595 0.20686267 0 1.530798e+00 NA 1.801979 2.387257 0.7861242 - - - hypothetical protein 2.933786 4.179483 1.0848305 597 Lipoprotein signal peptidase [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU possible lipoprotein signal peptidase TRUE TRUE 40 TRUE 1.2420407 1.6965657 1.0425778 0.8228004 0.5528280 U 0.575520 0.7899500 9.16 0.57819115 0.69512926 0.57521324 0.757599249 TRUE 0.5 0.757599249 TRUE 0.616774936 0.7899500 0.54004640 0.6197771 206672 7164 280401 280402 1 0 Same + + 81.7579780 0.20686267 0 3.936246e+02 117.7 2.933786 4.179483 1.0848305 597 Lipoprotein signal peptidase [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU possible lipoprotein signal peptidase 3.237681 4.564405 1.0651902 564 Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] J widely conserved hypothetical protein in the Rlu family of pseudouridine synthases - TRUE TRUE 41 TRUE 3.6166055 3.4583877 1.0425778 0.8228004 0.9373018 N 0.787079 0.9584861 2.87 0.89280330 0.95034066 0.89163020 0.993765078 TRUE 0.5 0.993765078 TRUE 0.977351622 0.9584861 0.83822193 0.9091503 206672 7164 280402 280403 1 439 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 3.237681 4.564405 1.0651902 564 Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] J widely conserved hypothetical protein in the Rlu family of pseudouridine synthases 2.438019 3.357195 0.9797296 - - - hypothetical protein TRUE TRUE 42 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 23.60 0.08438542 0.04798152 0.08344765 0.004623498 FALSE 0.5 0.004623498 FALSE 0.007624487 0.5463485 0.07694943 0.3429683 206672 7164 280403 280404 1 205 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.438019 3.357195 0.9797296 - - - hypothetical protein 3.486259 4.905687 1.1321227 1295 Predicted membrane protein [Function unknown] S narrowly conserved hypothetical membrane protein TRUE TRUE 43 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 19.40 0.25574770 0.04798152 0.25343270 0.017024055 FALSE 0.5 0.017024055 FALSE 0.027848723 0.5463485 0.07694943 0.3429683 206672 7164 280406 280407 1 89 Same + + 0.0000000 0.00000000 0 -2.993067e-01 NA 2.053193 2.762738 0.8624013 587 DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] L DNA polymerase III alpha subunit 3.501228 4.675359 1.0188880 - - - narrowly conserved hypothetical protein TRUE TRUE 44 TRUE 0.5005257 0.2582368 0.4201221 0.8228004 0.5528280 U 0.575520 0.5344143 12.46 0.54220165 0.01949129 0.53917216 0.023002198 FALSE 0.5 0.023002198 FALSE 0.062409934 0.5344143 0.05321168 0.3322233 206672 7164 280407 280408 1 206 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 3.501228 4.675359 1.0188880 - - - narrowly conserved hypothetical protein 1.707513 2.258735 0.7573981 4716 Myosin-crossreactive antigen [Function unknown] S narrowly conserved hypothetical protein TRUE TRUE 45 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 19.45 0.25221438 0.04798152 0.24992062 0.016714786 FALSE 0.5 0.016714786 FALSE 0.027348278 0.5463485 0.07694943 0.3429683 206672 7164 280408 280409 1 97 Same + + 0.0000000 0.01104984 0 -1.453735e+00 NA 1.707513 2.258735 0.7573981 4716 Myosin-crossreactive antigen [Function unknown] S narrowly conserved hypothetical protein 2.816012 3.735750 0.9731682 456 Acetyltransferases [General function prediction only] R hypothetical protein with acyl transferase domain TRUE TRUE 46 TRUE 0.5005257 0.3390916 0.7590838 0.8228004 0.5528280 U 0.575520 0.5692958 13.02 0.52181433 0.13257124 0.51876967 0.142937857 FALSE 0.5 0.142937857 FALSE 0.131992588 0.5692958 0.12230650 0.3642319 206672 7164 280409 2194466 1 617 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.816012 3.735750 0.9731682 456 Acetyltransferases [General function prediction only] R hypothetical protein with acyl transferase domain NA NA NA TRUE TRUE 47 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 24.34 0.06966608 0.04798152 0.06887958 0.003759890 FALSE 0.5 0.003759890 FALSE 0.006203828 0.5463485 0.07694943 0.3429683 206672 7164 2194466 2194467 1 431 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 48 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 23.56 0.08528557 0.04798152 0.08433873 0.004677164 FALSE 0.5 0.004677164 FALSE 0.007712716 0.5463485 0.07694943 0.3429683 206672 7164 2194467 2194468 1 169 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 49 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 17.70 0.34777370 0.04798152 0.34501185 0.026170378 FALSE 0.5 0.026170378 FALSE 0.042558899 0.5463485 0.07694943 0.3429683 206672 7164 281508 281509 1 13 Same + + 0.0000000 0.00000000 0 -4.635797e+00 117.7 3.720045 5.032944 1.0743623 1070 Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] G similar to xylulose kinase 4.204831 5.958659 1.0899305 1254 Acylphosphatases [Energy production and conversion] C possible acylphosphatase - TRUE TRUE 50 TRUE 0.5005257 0.6045932 0.4201221 0.8228004 0.9373018 N 0.787079 0.6307435 5.23 0.80370346 0.32877518 0.80177180 0.667272339 TRUE 0.5 0.667272339 TRUE 0.566482522 0.6307435 0.24193688 0.4254074 206672 7164 281509 281510 1 84 Same + + 0.0000000 0.00000000 0 -6.360185e+00 117.7 4.204831 5.958659 1.0899305 1254 Acylphosphatases [Energy production and conversion] C possible acylphosphatase 1.472964 2.036311 0.7328549 141 Histidinol dehydrogenase [Amino acid transport and metabolism] E histidinol dehydrogenase - TRUE TRUE 51 TRUE 0.5005257 0.6781036 0.4201221 0.8228004 0.9373018 N 0.787079 0.6404843 12.06 0.55057840 0.35642059 0.54755809 0.404216667 FALSE 0.5 0.404216667 FALSE 0.301633962 0.6404843 0.26066076 0.4357189 206672 7164 281510 281511 1 -3 Same + + 127.0260153 0.21791250 0 7.139346e+02 9.0 1.472964 2.036311 0.7328549 141 Histidinol dehydrogenase [Amino acid transport and metabolism] E histidinol dehydrogenase 1.609278 2.225993 0.7838417 79 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism] E histidinol-phosphate aminotransferase E TRUE TRUE 52 TRUE 3.8483832 3.6974025 1.6513766 0.8228004 2.4822223 Y 2.627081 0.9907278 1.71 0.90812607 0.98926952 0.90710321 0.998903839 TRUE 0.5 0.998903839 TRUE 0.988066114 0.9907278 0.89334770 0.9788637 206672 7164 281511 281512 1 86 Same + + 102.7394529 0.21791250 0 2.150348e+02 9.0 1.609278 2.225993 0.7838417 79 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism] E histidinol-phosphate aminotransferase 1.638608 2.219113 0.7701038 131 Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism] E imidazoleglycerol-phosphate dehydratase E TRUE TRUE 53 TRUE 3.7584896 3.2555068 1.6513766 0.8228004 2.4822223 Y 2.627081 0.9878188 12.14 0.54927824 0.98586140 0.54625639 0.988368767 TRUE 0.5 0.988368767 TRUE 0.906551635 0.9878188 0.88839832 0.9723363 206672 7164 281512 281513 1 829 Same + + 187.5417383 -6.18820862 0 9.812203e+02 9.0 1.638608 2.219113 0.7701038 131 Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism] E imidazoleglycerol-phosphate dehydratase 1.954181 2.705030 0.9062581 118 Glutamine amidotransferase [Amino acid transport and metabolism] E amidotransferase HisH E TRUE TRUE 54 TRUE 4.0662999 3.7938576 0.5242227 0.8228004 2.4822223 Y 2.627081 0.9886482 24.56 0.06584887 0.98683516 0.06510245 0.840864938 TRUE 0.5 0.840864938 TRUE 0.362743936 0.9886482 0.88980997 0.9741924 206672 7164 281513 281514 1 70 Same + + 219.3820782 0.21791250 0 1.500264e+03 9.0 1.954181 2.705030 0.9062581 118 Glutamine amidotransferase [Amino acid transport and metabolism] E amidotransferase HisH 2.124192 2.981539 0.9687670 106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism] E phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase E TRUE TRUE 55 TRUE 4.1416009 3.9752236 1.6513766 0.8228004 2.4822223 Y 2.627081 0.9926478 10.81 0.56654625 0.99150786 0.56354818 0.993489836 TRUE 0.5 0.993489836 TRUE 0.918930448 0.9926478 0.89661154 0.9831986 206672 7164 281516 281517 1 260 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.738720 2.323021 0.7792250 174 Glutamine synthetase [Amino acid transport and metabolism] E glutamine synthetase 2 2.093371 2.917705 0.9269769 - - - hypothetical transmembrane protein possibly involved in transport TRUE TRUE 56 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 21.30 0.15588768 0.04798152 0.15428921 0.009221818 FALSE 0.5 0.009221818 FALSE 0.015161991 0.5463485 0.07694943 0.3429683 206672 7164 281518 281519 1 -3 Same - - 0.0000000 -1.66629928 0 -1.666299e+00 NA 3.032912 4.018185 1.0136267 - - - hypothetical protein 2.178429 2.998711 0.9021308 1643 HrpA-like helicases [DNA replication, recombination, and repair] L ATP-dependent helicase FALSE TRUE 56 TRUE 0.5005257 0.3661941 0.4216961 0.8228004 0.5528280 U 0.575520 0.5498546 1.71 0.90812607 0.06136290 0.90710321 0.392537693 FALSE 0.5 0.392537693 FALSE 0.475149515 0.5498546 0.08390385 0.3461652 206672 7164 281519 281520 1 -10 Same - - 0.0000000 0.21791250 0 -1.346938e+00 117.7 2.178429 2.998711 0.9021308 1643 HrpA-like helicases [DNA replication, recombination, and repair] L ATP-dependent helicase 2.737741 3.768817 0.9749297 2813 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] J conserved hypothetical protein possibly in upfoo20 - FALSE TRUE 55 TRUE 0.5005257 0.3271095 1.6513766 0.8228004 0.9373018 N 0.787079 0.6728614 0.64 0.91180781 0.44255902 0.91082191 0.891400597 TRUE 0.5 0.891400597 TRUE 0.831079933 0.6728614 0.32243357 0.4713149 206672 7164 281521 281522 1 181 Same + + 3.5835189 0.21791250 0 -5.852973e+00 117.7 2.042568 2.883738 0.9001751 2262 GTPases [General function prediction only] R GTP-binding protein 1.379109 1.863791 0.6839737 39 Malate/lactate dehydrogenases [Energy production and conversion] C lactate dehydrogenase TRUE TRUE 55 TRUE 2.0757748 0.6569131 1.6513766 0.8228004 0.9373018 U 0.575520 0.7746593 18.49 0.31352552 0.66648013 0.31090600 0.477170779 FALSE 0.5 0.477170779 FALSE 0.324064013 0.7746593 0.51213036 0.5983963 206672 7164 281523 281524 1 166 Same - - 0.0000000 -4.30399684 0 -9.989307e+00 117.7 2.393792 3.387108 1.0115865 1230 Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] P probable cation efflux protein 2.279974 3.120817 0.9025970 1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms] KT LexA repressor - FALSE TRUE 55 TRUE 0.5005257 0.7720986 0.4621201 0.8228004 0.9373018 N 0.787079 0.6554306 17.49 0.35616375 0.39724226 0.35337137 0.267171119 FALSE 0.5 0.267171119 FALSE 0.183770237 0.6554306 0.28926513 0.4518930 206672 7164 281525 281526 1 17 Same + + 1.7707061 0.20686267 0 2.688435e+00 NA 4.614653 6.385349 1.0919942 - - - hypothetical protein with LysM domain of membrane-bound lytic murein transglycosylases 3.787973 5.241947 1.0631018 1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription] K hypothetical protein with high similarity to putative regulatory protein NrdR TRUE TRUE 55 TRUE 1.1892085 1.8076470 1.0425778 0.8228004 0.5528280 U 0.575520 0.7981331 5.74 0.76480936 0.71001030 0.76260801 0.888416179 TRUE 0.5 0.888416179 TRUE 0.802155634 0.7981331 0.55492540 0.6314971 206672 7164 281527 281528 1 11 Same - - 0.0000000 0.21791250 0 -8.787046e-01 117.7 2.090885 2.848297 0.9053853 111 Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] E D-3-phosphoglycerate dehydrogenase 2.296288 3.189427 0.9781742 3973 Superfamily I DNA and RNA helicases [General function prediction only] R narrowly conserved hypothetical protein with helicase motifs FALSE TRUE 55 TRUE 0.5005257 0.3010316 1.6513766 0.8228004 0.9373018 U 0.575520 0.6521062 4.90 0.82584160 0.38832443 0.82408010 0.750649047 TRUE 0.5 0.750649047 TRUE 0.651671545 0.6521062 0.28291600 0.4482579 206672 7164 281529 281530 1 0 Same + + 187.6565606 0.21791250 0 9.280472e+02 NA 2.135510 2.950438 0.9375794 2001 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein in upf0040 3.100304 4.297396 1.0276762 275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane] M widely conserved hypothetical protein in upf0117 TRUE TRUE 55 TRUE 4.0738272 3.7789357 1.6513766 0.8228004 0.5528280 U 0.575520 0.9680355 2.87 0.89280330 0.96214095 0.89163020 0.995297708 TRUE 0.5 0.995297708 TRUE 0.979982692 0.9680355 0.85461141 0.9292102 206672 7164 281530 281531 1 453 Same + + 234.6444570 -6.18820862 0 1.338428e+03 117.7 3.100304 4.297396 1.0276762 275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane] M widely conserved hypothetical protein in upf0117 2.345024 3.168541 0.9336395 768 Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane] M peptidoglycan synthetase; penicillin-binding protein 3 precursor M TRUE TRUE 56 TRUE 4.2094144 3.8991420 0.5242227 0.8228004 0.9373018 Y 2.627081 0.9833052 23.75 0.08111876 0.98053358 0.08021411 0.816402714 TRUE 0.5 0.816402714 TRUE 0.394585717 0.9833052 0.88070950 0.9623048 206672 7164 281531 281532 1 27 Same + + 0.0000000 0.21791250 0 2.179125e-01 NA 2.345024 3.168541 0.9336395 768 Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane] M peptidoglycan synthetase; penicillin-binding protein 3 precursor 2.857375 3.983597 1.0023650 - - - hypothetical protein possibly involved in cell wall formation TRUE TRUE 57 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.5528280 U 0.575520 0.7565067 6.92 0.67606804 0.63096557 0.67339079 0.781105708 TRUE 0.5 0.781105708 TRUE 0.657212273 0.7565067 0.47879659 0.5738558 206672 7164 281532 281533 1 49 Same + + 0.0000000 0.21791250 0 2.179125e-01 NA 2.857375 3.983597 1.0023650 - - - hypothetical protein possibly involved in cell wall formation 2.625653 3.645481 1.0231011 770 UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TRUE TRUE 58 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.5528280 U 0.575520 0.7565067 8.56 0.58992992 0.63096557 0.58697568 0.710957116 TRUE 0.5 0.710957116 TRUE 0.569254741 0.7565067 0.47879659 0.5738558 206672 7164 281533 281534 1 45 Same + + 206.8278468 0.21791250 0 1.429806e+03 16.0 2.625653 3.645481 1.0231011 770 UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 2.132086 2.891317 0.8809425 472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane] M phospho-N-acetylmuramoyl-pentapeptide-transferase M TRUE TRUE 59 TRUE 4.1190045 3.9447040 1.6513766 0.8228004 2.1874566 Y 2.627081 0.9917481 8.16 0.59878829 0.99046006 0.59585415 0.993587677 TRUE 0.5 0.993587677 TRUE 0.927180134 0.9917481 0.89508237 0.9811646 206672 7164 281534 281535 1 55 Same + + 234.3119533 0.21791250 0 1.599511e+03 16.0 2.132086 2.891317 0.8809425 472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane] M phospho-N-acetylmuramoyl-pentapeptide-transferase 2.264735 3.091632 0.9230712 771 UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylmuramoylalanine--D-glutamate ligase M TRUE TRUE 60 TRUE 4.2018780 4.0058582 1.6513766 0.8228004 2.1874566 Y 2.627081 0.9921954 9.16 0.57819115 0.99098128 0.57521324 0.993404465 TRUE 0.5 0.993404465 TRUE 0.921811303 0.9921954 0.89584276 0.9821753 206672 7164 281535 281536 1 -13 Same + + 158.1825810 0.20686267 0 1.170723e+03 117.7 2.264735 3.091632 0.9230712 771 UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylmuramoylalanine--D-glutamate ligase 2.702459 3.696730 0.9969184 772 Bacterial cell division membrane protein [Cell division and chromosome partitioning] D probable FtsW-like protein - TRUE TRUE 61 TRUE 3.9760308 3.8538430 1.0425778 0.8228004 0.9373018 N 0.787079 0.9694543 0.48 0.91163686 0.96387439 0.91064924 0.996380328 TRUE 0.5 0.996380328 TRUE 0.984089277 0.9694543 0.85704205 0.9322318 206672 7164 281536 281537 1 16 Same + + 160.1119740 0.20686267 0 1.197102e+03 117.7 2.702459 3.696730 0.9969184 772 Bacterial cell division membrane protein [Cell division and chromosome partitioning] D probable FtsW-like protein 2.394541 3.323044 0.9796478 707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase - TRUE TRUE 62 TRUE 3.9910674 3.8613745 1.0425778 0.8228004 0.9373018 N 0.787079 0.9696949 5.57 0.77800162 0.96416779 0.77588757 0.989506773 TRUE 0.5 0.989506773 TRUE 0.954711745 0.9696949 0.85745405 0.9327451 206672 7164 281537 281538 1 101 Same + + 213.5283746 0.21791250 0 1.399823e+03 117.7 2.394541 3.323044 0.9796478 707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 2.223874 3.032956 0.9144850 773 UDP-N-acetylmuramate-alanine ligase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylmuramate--alanine ligase M TRUE TRUE 63 TRUE 4.1340682 3.9218903 1.6513766 0.8228004 0.9373018 Y 2.627081 0.9876899 13.31 0.50899968 0.98570993 0.50595068 0.986208288 TRUE 0.5 0.986208288 TRUE 0.891704930 0.9876899 0.88817891 0.9720482 206672 7164 281538 2194469 1 1249 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.223874 3.032956 0.9144850 773 UDP-N-acetylmuramate-alanine ligase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylmuramate--alanine ligase NA NA NA TRUE TRUE 64 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 24.76 0.06254486 0.04798152 0.06183342 0.003351289 FALSE 0.5 0.003351289 FALSE 0.005531109 0.5463485 0.07694943 0.3429683 206672 7164 2194470 281539 1 155 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA NA NA NA 1.874756 2.466967 0.7487727 3636 Predicted transcriptional regulator [Transcription] K narrowly conserved hypothetical protein with possible DNA interaction motif FALSE TRUE 64 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 16.78 0.38409516 0.04798152 0.38121345 0.030472898 FALSE 0.5 0.030472898 FALSE 0.049419030 0.5463485 0.07694943 0.3429683 206672 7164 281540 281541 1 161 Same + + 0.0000000 0.01104984 0 -5.803514e-01 117.7 2.286557 3.078001 0.9174356 1490 D-Tyr-tRNAtyr deacylase [Translation, ribosomal structure and biogenesis] J conserved hypothetical protein 1.949562 2.660768 0.8559802 383 Alpha-mannosidase [Carbohydrate transport and metabolism] G alpha-mannosidase - TRUE TRUE 64 TRUE 0.5005257 0.2781427 0.7590838 0.8228004 0.9373018 N 0.787079 0.6090862 17.14 0.37100159 0.26414052 0.36815940 0.174728318 FALSE 0.5 0.174728318 FALSE 0.128558950 0.6090862 0.20007298 0.4031038 206672 7164 281541 281542 1 131 Same + + 0.0000000 0.01104984 0 1.104984e-02 3.0 1.949562 2.660768 0.8559802 383 Alpha-mannosidase [Carbohydrate transport and metabolism] G alpha-mannosidase 2.482902 3.411853 1.0069650 383 Alpha-mannosidase [Carbohydrate transport and metabolism] G alpha-mannosidase G TRUE TRUE 65 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 2.8214011 Y 2.627081 0.8846515 15.36 0.42257215 0.85050294 0.41959843 0.806328504 TRUE 0.5 0.806328504 TRUE 0.641460335 0.8846515 0.70970080 0.7687406 206672 7164 281542 281543 1 270 Same + + 0.0000000 -4.51085951 0 1.104984e-02 3.0 2.482902 3.411853 1.0069650 383 Alpha-mannosidase [Carbohydrate transport and metabolism] G alpha-mannosidase 2.347979 3.199090 0.9630685 383 Alpha-mannosidase [Carbohydrate transport and metabolism] G alpha-mannosidase G TRUE TRUE 66 TRUE 0.5005257 0.8390215 0.4892871 0.8228004 2.8214011 Y 2.627081 0.8767217 21.47 0.14903119 0.83878051 0.14749075 0.476757383 FALSE 0.5 0.476757383 FALSE 0.285918442 0.8767217 0.69570525 0.7550488 206672 7164 281543 281544 1 196 Same + + 0.0000000 0.01104984 0 -1.304772e-02 117.7 2.347979 3.199090 0.9630685 383 Alpha-mannosidase [Carbohydrate transport and metabolism] G alpha-mannosidase 1.932730 2.505616 0.8164399 1653 ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism] G probable solute-binding protein of ABC transporter system G TRUE TRUE 67 TRUE 0.5005257 0.2325113 0.7590838 0.8228004 0.9373018 Y 2.627081 0.7493420 19.09 0.27760199 0.61647449 0.27516231 0.381832587 FALSE 0.5 0.381832587 FALSE 0.250813394 0.7493420 0.46558176 0.5644111 206672 7164 281544 281545 1 3 Same + + 2.4608091 0.01104984 0 1.008660e+01 91.0 1.932730 2.505616 0.8164399 1653 ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism] G probable solute-binding protein of ABC transporter system 2.485295 3.350486 0.9751762 1175 ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism] G probable sugar permease of ABC transporter system G TRUE TRUE 68 TRUE 1.8073321 2.0476528 0.7590838 0.8228004 1.0407775 Y 2.627081 0.9241799 3.66 0.87430856 0.90593668 0.87296187 0.985292842 TRUE 0.5 0.985292842 TRUE 0.960793090 0.9241799 0.77890605 0.8408441 206672 7164 281545 281546 1 0 Same + + 6.3320101 0.01104984 0 1.530806e+01 91.0 2.485295 3.350486 0.9751762 1175 ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism] G probable sugar permease of ABC transporter system 2.549399 3.477299 0.9678976 395 ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism] G probable sugar permease of ABC transporter system G TRUE TRUE 69 TRUE 2.3716757 2.1668434 0.7590838 0.8228004 1.0407775 Y 2.627081 0.9377937 2.87 0.89280330 0.92394642 0.89163020 0.990213502 TRUE 0.5 0.990213502 TRUE 0.971303475 0.9377937 0.80252676 0.8672722 206672 7164 281546 281547 1 14 Same + + 2.4608091 0.01104984 0 3.828371e+00 NA 2.549399 3.477299 0.9678976 395 ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism] G probable sugar permease of ABC transporter system 3.338310 4.521572 1.0644529 - - - narrowly conserved hypothetical protein TRUE TRUE 70 TRUE 1.8073321 1.8647417 0.7590838 0.8228004 0.5528280 U 0.575520 0.8154923 5.32 0.79709865 0.74058967 0.79511857 0.918136602 TRUE 0.5 0.918136602 TRUE 0.847762156 0.8154923 0.58635020 0.6570283 206672 7164 281547 281548 1 125 Same + + 0.0000000 0.01104984 0 1.104984e-02 NA 3.338310 4.521572 1.0644529 - - - narrowly conserved hypothetical protein 3.360379 4.586526 1.0951235 1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] G probable pentosidase or hexosidase TRUE TRUE 71 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.5528280 U 0.575520 0.6376114 15.12 0.43281702 0.34835488 0.42982488 0.289740375 FALSE 0.5 0.289740375 FALSE 0.207226805 0.6376114 0.25514522 0.4326592 206672 7164 281548 281549 1 48 Same + + 0.0000000 0.01104984 0 1.104984e-02 117.7 3.360379 4.586526 1.0951235 1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] G probable pentosidase or hexosidase 2.351976 3.139798 0.9212419 4724 Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism] G probable endo-beta-N-acetylglucosaminidase; di-N-acetylchitobiosyl beta-N-acetylglucosaminidase G TRUE TRUE 72 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.9373018 Y 2.627081 0.8087825 8.42 0.59256565 0.72892560 0.58961719 0.796370145 TRUE 0.5 0.796370145 TRUE 0.662330341 0.8087825 0.57422604 0.6470499 206672 7164 281549 281550 1 296 Same + + 2.2881964 -4.51085951 0 -3.960269e-01 117.7 2.351976 3.139798 0.9212419 4724 Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism] G probable endo-beta-N-acetylglucosaminidase; di-N-acetylchitobiosyl beta-N-acetylglucosaminidase 3.409365 4.735646 1.0998899 1609 Transcriptional regulators [Transcription] K probable LacI-type transcriptional regulator - TRUE TRUE 73 TRUE 1.4936586 0.2655491 0.4892871 0.8228004 0.9373018 N 0.787079 0.6490303 21.82 0.13600902 0.37999194 0.13458189 0.087990338 FALSE 0.5 0.087990338 FALSE 0.056890246 0.6490303 0.27703486 0.4449139 206672 7164 281551 281552 1 4 Same - - 0.0000000 0.01104984 0 1.104984e-02 NA 2.218762 2.968990 0.8683598 2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] G narrowly conserved hypothetical protein with possible isomerase function 2.023439 2.660471 0.8322898 3538 Uncharacterized conserved protein [Function unknown] S narrowly conserved hypothetical protein FALSE TRUE 73 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.5528280 U 0.575520 0.6376114 3.89 0.86743989 0.34835488 0.86603088 0.777685921 TRUE 0.5 0.777685921 TRUE 0.691502622 0.6376114 0.25514522 0.4326592 206672 7164 281552 281553 1 211 Same - - 0.0000000 -4.51085951 0 -5.115348e+00 NA 2.023439 2.660471 0.8322898 3538 Uncharacterized conserved protein [Function unknown] S narrowly conserved hypothetical protein 1.310766 1.774450 0.6618394 524 Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] G protein in PfkB family of sugar kinases FALSE TRUE 72 TRUE 0.5005257 0.6210907 0.4892871 0.8228004 0.5528280 U 0.575520 0.5902100 19.55 0.24521772 0.20393684 0.24296692 0.076834762 FALSE 0.5 0.076834762 FALSE 0.059635533 0.5902100 0.16331961 0.3843350 206672 7164 281553 281554 1 73 Same - - 0.0000000 0.21791250 0 8.345999e-03 117.7 1.310766 1.774450 0.6618394 524 Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] G protein in PfkB family of sugar kinases 1.822907 2.471477 0.7675814 1940 Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] KG probable transcriptional repressor in the Rok (NagC/XylR) family G FALSE TRUE 71 TRUE 0.5005257 0.7011026 1.6513766 0.8228004 0.9373018 Y 2.627081 0.8338102 11.02 0.56266522 0.77147700 0.55966117 0.812852989 TRUE 0.5 0.812852989 TRUE 0.676688238 0.8338102 0.61930699 0.6850015 206672 7164 281557 281558 1 56 Same + + 26.7245801 0.01104984 0 2.146417e+02 2.0 1.639325 2.214993 0.7864316 363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism] G glucosamine-6-phosphate isomerase 1 1.706010 2.346147 0.7706894 1820 N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] G N-acetylglucosamine-6-phosphate deacetylase G TRUE TRUE 71 TRUE 3.1443328 3.2486339 0.7590838 0.8228004 2.8650285 Y 2.627081 0.9837909 9.26 0.57534257 0.98110931 0.57235942 0.985987553 TRUE 0.5 0.985987553 TRUE 0.909763799 0.9837909 0.88153754 0.9633789 206672 7164 281558 281559 1 280 Same + + 0.0000000 -1.67734912 0 -4.368777e+00 117.7 1.706010 2.346147 0.7706894 1820 N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] G N-acetylglucosamine-6-phosphate deacetylase 1.269152 1.676545 0.5344382 747 ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism] E probable solute-binding protein of ABC transporter for peptides - TRUE TRUE 72 TRUE 0.5005257 0.5805215 0.4455524 0.8228004 0.9373018 N 0.787079 0.6291917 21.68 0.14103095 0.32429188 0.13955964 0.073042195 FALSE 0.5 0.073042195 FALSE 0.049022566 0.6291917 0.23894793 0.4237810 206672 7164 281559 281560 1 165 Same + + 40.2085666 0.20686267 0 1.008705e+02 91.0 1.269152 1.676545 0.5344382 747 ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism] E probable solute-binding protein of ABC transporter for peptides 1.691111 2.346688 0.7779240 601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP probable permease of ABC transporter for peptides E TRUE TRUE 73 TRUE 3.3349616 3.0002839 1.0425778 0.8228004 1.0407775 Y 2.627081 0.9711288 17.45 0.35778659 0.96591365 0.35498851 0.940430470 TRUE 0.5 0.940430470 TRUE 0.773740129 0.9711288 0.85990918 0.9358117 206672 7164 281560 281561 1 119 Same + + 29.6468362 0.21791250 0 2.039269e+02 91.0 1.691111 2.346688 0.7779240 601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP probable permease of ABC transporter for peptides 1.380217 1.920663 0.6783204 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP probable permease of ABC transporter for peptides EP TRUE TRUE 74 TRUE 3.2247496 3.2212259 1.6513766 0.8228004 1.0407775 Y 2.627081 0.9777776 14.61 0.45545287 0.97394188 0.45242907 0.969002477 TRUE 0.5 0.969002477 TRUE 0.849877408 0.9777776 0.87127756 0.9501765 206672 7164 281561 281562 1 4 Same + + 17.3262810 0.21791250 0 1.446463e+01 117.7 1.380217 1.920663 0.6783204 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP probable permease of ABC transporter for peptides 1.429720 1.959275 0.6588911 1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] R ATP binding protein of ABC transporter TRUE TRUE 75 TRUE 2.8623887 2.1458012 1.6513766 0.8228004 0.9373018 U 0.575520 0.9078662 3.89 0.86743989 0.88364370 0.86603088 0.980274238 TRUE 0.5 0.980274238 TRUE 0.951642170 0.9078662 0.75045697 0.8102804 206672 7164 281563 281564 1 49 Same - - 0.0000000 0.21791250 0 -2.366119e+00 117.7 2.137541 2.906166 0.8709816 1051 ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] F hypothetical protein containing MutT-like domain 1.481167 2.002721 0.7023574 6 Xaa-Pro aminopeptidase [Amino acid transport and metabolism] E Xaa-Pro aminopeptidase I - FALSE TRUE 75 TRUE 0.5005257 0.4591799 1.6513766 0.8228004 0.9373018 N 0.787079 0.6892722 8.56 0.58992992 0.48312917 0.58697568 0.573505182 TRUE 0.5 0.573505182 TRUE 0.440255712 0.6892722 0.35347479 0.4901755 206672 7164 281564 281565 1 304 Same - - 0.0000000 0.00000000 0 -5.117076e-01 NA 1.481167 2.002721 0.7023574 6 Xaa-Pro aminopeptidase [Amino acid transport and metabolism] E Xaa-Pro aminopeptidase I 4.166105 5.664273 1.0792381 - - - hypothetical protein FALSE TRUE 74 TRUE 0.5005257 0.2742625 0.4201221 0.8228004 0.5528280 U 0.575520 0.5366950 21.88 0.13392230 0.01949129 0.13251370 0.003064448 FALSE 0.5 0.003064448 FALSE 0.009389290 0.5366950 0.05775600 0.3342606 206672 7164 281565 281566 1 640 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 4.166105 5.664273 1.0792381 - - - hypothetical protein 5.102391 7.026502 1.1743805 - - - hypothetical protein FALSE TRUE 73 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 24.36 0.06931035 0.04798152 0.06852757 0.003739338 FALSE 0.5 0.003739338 FALSE 0.006170000 0.5463485 0.07694943 0.3429683 206672 7164 281567 281568 1 61 Same + + 0.0000000 0.01104984 0 -1.121793e+01 117.7 1.606172 2.201264 0.7276972 285 Folylpolyglutamate synthase [Coenzyme metabolism] H folylpolyglutamate synthase 2.415947 3.337754 0.9759207 1196 Chromosome segregation ATPases [Cell division and chromosome partitioning] D chromosome partitioning protein Smc - TRUE TRUE 73 TRUE 0.5005257 0.7820082 0.7590838 0.8228004 0.9373018 N 0.787079 0.6751909 9.84 0.56848433 0.44843803 0.56548938 0.517164802 TRUE 0.5 0.517164802 TRUE 0.390123472 0.6751909 0.32685081 0.4739576 206672 7164 281569 281570 1 122 Same - - 0.0000000 0.00000000 0 0.000000e+00 16.0 2.162395 2.937501 0.8980128 - - - hypothetical protein with possible similarity to FemA involved in pentaglycine interpeptide bridge in peptidoglycan 1.814407 2.434332 0.7931254 769 UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase FALSE TRUE 73 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 2.1874566 U 0.575520 0.6686855 14.85 0.44479110 0.43191769 0.44178066 0.378535014 FALSE 0.5 0.378535014 FALSE 0.268769202 0.6686855 0.31450604 0.4666057 206672 7164 281571 281572 1 0 Same + + 0.0000000 0.01104984 0 1.104984e-02 NA 2.903658 3.860274 0.9944102 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K RNA polymerase sigma-E factor 2.885349 3.934374 0.9910768 - - - hypothetical protein TRUE TRUE 73 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.5528280 U 0.575520 0.6376114 2.87 0.89280330 0.34835488 0.89163020 0.816591405 TRUE 0.5 0.816591405 TRUE 0.740456859 0.6376114 0.25514522 0.4326592 206672 7164 281573 281574 1 125 Same - - 0.0000000 0.00000000 0 -4.995862e-01 3.0 1.701868 2.282498 0.7973292 2017 Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] G hypothetical protein with possible aldose-1-epimerase domain 2.146128 2.838077 0.8702961 2017 Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] G hypothetical protein in aldose epimerase family G FALSE TRUE 73 TRUE 0.5005257 0.2721253 0.4201221 0.8228004 2.8214011 Y 2.627081 0.8345253 15.12 0.43281702 0.77265536 0.42982488 0.721717916 TRUE 0.5 0.721717916 TRUE 0.555195119 0.8345253 0.62058943 0.6861160 206672 7164 281576 281577 1 166 Same - - 0.0000000 0.21791250 0 -7.473532e+00 117.7 2.409776 3.350496 0.9578403 2606 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein very similar to YbaK of E. coli 1.272153 1.683641 0.5697951 57 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism] G glyceraldehyde 3-phosphate dehydrogenase C FALSE TRUE 72 TRUE 0.5005257 0.7108784 1.6513766 0.8228004 0.9373018 U 0.575520 0.7032459 17.49 0.35616375 0.51618163 0.35337137 0.371145747 FALSE 0.5 0.371145747 FALSE 0.253014241 0.7032459 0.37976483 0.5066947 206672 7164 281577 281578 1 241 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 1.272153 1.683641 0.5697951 57 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism] G glyceraldehyde 3-phosphate dehydrogenase C 2.913718 4.049028 1.0240892 - - - hypothetical protein FALSE TRUE 71 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 20.82 0.17674902 0.04798152 0.17498098 0.010704816 FALSE 0.5 0.010704816 FALSE 0.017583299 0.5463485 0.07694943 0.3429683 206672 7164 281579 281580 1 372 Same + + 0.0000000 0.00000000 0 0.000000e+00 117.7 2.462612 3.287874 0.9168127 421 Spermidine synthase [Amino acid transport and metabolism] E hypothetical protein with low similarity to spermidine synthase 1.607204 2.151609 0.7959639 290 Translation initiation factor 3 (IF-3) [Translation, ribosomal structure and biogenesis] J translation initiation factor If-3 - TRUE TRUE 71 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.9373018 N 0.787079 0.5951492 22.88 0.10252132 0.22005880 0.10140434 0.031224124 FALSE 0.5 0.031224124 FALSE 0.023332320 0.5951492 0.17296062 0.3891876 206672 7164 281580 281581 1 -19 Same + + 35.8416686 0.01104984 0 9.469851e+01 117.7 1.607204 2.151609 0.7959639 290 Translation initiation factor 3 (IF-3) [Translation, ribosomal structure and biogenesis] J translation initiation factor If-3 1.418260 1.878722 0.9293525 - - - 50S ribosomal protein L35 TRUE TRUE 72 TRUE 3.2761057 2.9741416 0.7590838 0.8228004 0.9373018 U 0.575520 0.9320068 0.32 0.91132798 0.91635518 0.91033725 0.991196671 TRUE 0.5 0.991196671 TRUE 0.975156845 0.9320068 0.79249941 0.8559326 206672 7164 281581 281582 1 53 Same + + 233.9487074 0.21791250 0 1.317262e+03 37.0 1.418260 1.878722 0.9293525 - - - 50S ribosomal protein L35 1.412017 1.923298 0.8013053 292 Ribosomal protein L20 [Translation, ribosomal structure and biogenesis] J 50S ribosomal protein L20 TRUE TRUE 73 TRUE 4.1943420 3.8915739 1.6513766 0.8228004 1.9729025 U 0.575520 0.9811915 8.99 0.58217046 0.97802175 0.57920019 0.984127516 TRUE 0.5 0.984127516 TRUE 0.908627038 0.9811915 0.87710489 0.9576469 206672 7164 281582 281583 1 115 Same + + 0.0000000 0.21791250 0 -2.189575e+01 117.7 1.412017 1.923298 0.8013053 292 Ribosomal protein L20 [Translation, ribosomal structure and biogenesis] J 50S ribosomal protein L20 2.701188 3.695675 0.9594523 4974 Site-specific recombinase XerD [DNA replication, recombination, and repair] L probable integrase/recombinase - TRUE TRUE 74 TRUE 0.5005257 0.8455406 1.6513766 0.8228004 0.9373018 N 0.787079 0.7345388 14.27 0.46987707 0.58563883 0.46683960 0.556094732 TRUE 0.5 0.556094732 TRUE 0.408730527 0.7345388 0.43817353 0.5453134 206672 7164 281583 281584 1 128 Same + + 0.0000000 0.01104984 0 1.104984e-02 117.7 2.701188 3.695675 0.9594523 4974 Site-specific recombinase XerD [DNA replication, recombination, and repair] L probable integrase/recombinase 1.956356 2.624854 0.8309594 1136 ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] V large protein with N-terminal similarity to ATP binding protein of ABC transporter - TRUE TRUE 75 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.9373018 N 0.787079 0.6823035 15.20 0.42934207 0.46613970 0.42635589 0.396472524 FALSE 0.5 0.396472524 FALSE 0.279604239 0.6823035 0.34031528 0.4820966 206672 7164 281584 281585 1 202 Same + + 0.0000000 0.01104984 0 1.104984e-02 117.7 1.956356 2.624854 0.8309594 1136 ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] V large protein with N-terminal similarity to ATP binding protein of ABC transporter 2.353112 3.244973 0.9575974 1192 ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] D widely conserved hypothetical protein in ParA family - TRUE TRUE 76 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.9373018 N 0.787079 0.6823035 19.33 0.26071371 0.46613970 0.25836936 0.235427979 FALSE 0.5 0.235427979 FALSE 0.153923779 0.6823035 0.34031528 0.4820966 206672 7164 281585 281586 1 19 Same + + 2.4608091 0.01104984 0 5.994628e+01 NA 2.353112 3.244973 0.9575974 1192 ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] D widely conserved hypothetical protein in ParA family 2.489342 3.474870 0.9879350 1354 Uncharacterized conserved protein [Function unknown] S narrowly conserved hypothetical protein TRUE TRUE 77 TRUE 1.8073321 2.7701235 0.7590838 0.8228004 0.5528280 U 0.575520 0.8812282 6.03 0.74322595 0.84546821 0.74089103 0.940603941 TRUE 0.5 0.940603941 TRUE 0.872984458 0.8812282 0.70366352 0.7627996 206672 7164 281586 281587 1 13 Same + + 24.3808490 0.01104984 0 1.620130e+02 NA 2.489342 3.474870 0.9879350 1354 Uncharacterized conserved protein [Function unknown] S narrowly conserved hypothetical protein 2.638056 3.715496 1.0167939 1386 Predicted transcriptional regulator containing the HTH domain [Transcription] K conserved hypothetical protein TRUE TRUE 78 TRUE 3.0860799 3.1062439 0.7590838 0.8228004 0.5528280 U 0.575520 0.9257711 5.23 0.80370346 0.90806891 0.80177180 0.975870269 TRUE 0.5 0.975870269 TRUE 0.936138252 0.9257711 0.78167234 0.8438886 206672 7164 281587 281588 1 132 Same + + 0.0000000 0.01104984 0 -6.600198e-01 NA 2.638056 3.715496 1.0167939 1386 Predicted transcriptional regulator containing the HTH domain [Transcription] K conserved hypothetical protein 2.217286 3.081382 0.9117472 1051 ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] F narrowly conserved hypothetical protein possibly in the MutT/Nudix family - TRUE TRUE 79 TRUE 0.5005257 0.2858431 0.7590838 0.8228004 0.5528280 N 0.787079 0.5808924 15.48 0.41770063 0.17277699 0.41473657 0.130301870 FALSE 0.5 0.130301870 FALSE 0.108525011 0.5808924 0.14508565 0.3752910 206672 7164 281588 281589 1 61 Same + + 2.3025851 0.01104984 0 6.976595e+00 NA 2.217286 3.081382 0.9117472 1051 ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] F narrowly conserved hypothetical protein possibly in the MutT/Nudix family 1.491254 2.004269 0.6930489 379 Quinolinate synthase [Coenzyme metabolism] H quinolinate synthetase - TRUE TRUE 80 TRUE 1.5445981 1.9871645 0.7590838 0.8228004 0.5528280 N 0.787079 0.8273374 9.84 0.56848433 0.76071898 0.56548938 0.807258692 TRUE 0.5 0.807258692 TRUE 0.671121596 0.8273374 0.60768518 0.6749921 206672 7164 281589 281590 1 88 Same + + 107.6575616 0.01104984 0 4.715394e+02 7.0 1.491254 2.004269 0.6930489 379 Quinolinate synthase [Coenzyme metabolism] H quinolinate synthetase 1.811739 2.509546 0.8491384 29 Aspartate oxidase [Coenzyme metabolism] H L-aspartate oxidase H TRUE TRUE 81 TRUE 3.7809444 3.5515299 0.7590838 0.8228004 2.6682522 Y 2.627081 0.9876272 12.36 0.54478424 0.98563631 0.54175740 0.987969446 TRUE 0.5 0.987969446 TRUE 0.904721091 0.9876272 0.88807229 0.9719083 206672 7164 281590 281591 1 4 Same + + 100.7538000 0.01104984 0 5.239716e+02 7.0 1.811739 2.509546 0.8491384 29 Aspartate oxidase [Coenzyme metabolism] H L-aspartate oxidase 1.699647 2.345302 0.7468497 157 Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism] H probable nicotinate-nucleotide pyrophosphorylase [carboxylating] H TRUE TRUE 82 TRUE 3.7510076 3.5732132 0.7590838 0.8228004 2.6682522 Y 2.627081 0.9876851 3.89 0.86743989 0.98570437 0.86603088 0.997788593 TRUE 0.5 0.997788593 TRUE 0.981122043 0.9876851 0.88817086 0.9720377 206672 7164 281591 281592 1 3 Same + + 2.3025851 0.01104984 0 -9.043938e+00 117.7 1.699647 2.345302 0.7468497 157 Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism] H probable nicotinate-nucleotide pyrophosphorylase [carboxylating] 2.162884 3.047716 0.9320590 1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism] E possible pyridoxal-phosphate-dependent aminotransferase - TRUE TRUE 83 TRUE 1.5445981 0.7583818 0.7590838 0.8228004 0.9373018 N 0.787079 0.7281527 3.66 0.87430856 0.57194927 0.87296187 0.902859797 TRUE 0.5 0.902859797 TRUE 0.837897081 0.7281527 0.42630581 0.5372430 206672 7164 281592 281593 1 32 Same + + 0.0000000 0.01104984 0 -5.826639e+00 117.7 2.162884 3.047716 0.9320590 1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism] E possible pyridoxal-phosphate-dependent aminotransferase 1.591131 2.201954 0.7155424 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G probable sugar transporter - TRUE TRUE 84 TRUE 0.5005257 0.6551710 0.7590838 0.8228004 0.9373018 N 0.787079 0.6590781 7.21 0.65215252 0.40692332 0.64938012 0.562623288 TRUE 0.5 0.562623288 TRUE 0.441066237 0.6590781 0.29622274 0.4559064 206672 7164 281593 281594 1 315 Same + + 0.0000000 -4.30399684 0 -5.212100e+00 117.7 1.591131 2.201954 0.7155424 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G probable sugar transporter 1.303220 1.792337 0.6034483 1217 Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] T widely conserved protein similar to those annotated as GTP-binding elongation factor TypA/BipA - TRUE TRUE 85 TRUE 0.5005257 0.6261103 0.4621201 0.8228004 0.9373018 N 0.787079 0.6363299 22.09 0.12678229 0.34473348 0.12543792 0.070963389 FALSE 0.5 0.070963389 FALSE 0.046794405 0.6363299 0.25268306 0.4312993 206672 7164 281594 281595 1 124 Same + + 0.0000000 0.01104984 0 1.104984e-02 NA 1.303220 1.792337 0.6034483 1217 Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] T widely conserved protein similar to those annotated as GTP-binding elongation factor TypA/BipA 2.746836 3.811996 1.0150000 - - - hypothetical protein TRUE TRUE 86 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.5528280 U 0.575520 0.6376114 15.02 0.43722021 0.34835488 0.43422093 0.293441057 FALSE 0.5 0.293441057 FALSE 0.210185467 0.6376114 0.25514522 0.4326592 206672 7164 281595 281596 1 80 Same + + 0.0000000 0.01104984 0 1.104984e-02 NA 2.746836 3.811996 1.0150000 - - - hypothetical protein 1.796842 2.438342 0.7587272 77 Prephenate dehydratase [Amino acid transport and metabolism] E probable chorismate mutase (CM); prephenate dehydratase TRUE TRUE 87 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.5528280 U 0.575520 0.6376114 11.63 0.55568792 0.34835488 0.55267405 0.400688122 FALSE 0.5 0.400688122 FALSE 0.299920440 0.6376114 0.25514522 0.4326592 206672 7164 281596 281597 1 -6 Same + + 59.3885690 0.21791250 0 5.500792e+01 117.7 1.796842 2.438342 0.7587272 77 Prephenate dehydratase [Amino acid transport and metabolism] E probable chorismate mutase (CM); prephenate dehydratase 1.812154 2.517738 0.8187105 287 Prephenate dehydrogenase [Amino acid transport and metabolism] E probable prephenate dehydrogenase E TRUE TRUE 88 TRUE 3.4976338 2.7021365 1.6513766 0.8228004 0.9373018 Y 2.627081 0.9713712 0.88 0.91177077 0.96620826 0.91078450 0.996627132 TRUE 0.5 0.996627132 TRUE 0.984532631 0.9713712 0.86032406 0.9363311 206672 7164 281597 281598 1 212 Same + + 0.0000000 0.01104984 0 1.104984e-02 NA 1.812154 2.517738 0.8187105 287 Prephenate dehydrogenase [Amino acid transport and metabolism] E probable prephenate dehydrogenase 2.560871 3.536334 0.9614326 - - - hypothetical protein TRUE TRUE 89 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.5528280 U 0.575520 0.6376114 19.63 0.23972118 0.34835488 0.23750496 0.144242997 FALSE 0.5 0.144242997 FALSE 0.097478111 0.6376114 0.25514522 0.4326592 206672 7164 281598 281599 1 35 Same + + 0.0000000 0.01104984 0 1.104984e-02 NA 2.560871 3.536334 0.9614326 - - - hypothetical protein 2.833567 3.899905 1.0281632 4974 Site-specific recombinase XerD [DNA replication, recombination, and repair] L probable integrase/recombinase protein similar to RV2894C TRUE TRUE 90 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.5528280 U 0.575520 0.6376114 7.44 0.63460519 0.34835488 0.63177191 0.481445087 FALSE 0.5 0.481445087 FALSE 0.373008508 0.6376114 0.25514522 0.4326592 206672 7164 281599 281600 1 253 Same + + 0.0000000 0.20686267 0 -1.173781e+00 117.7 2.833567 3.899905 1.0281632 4974 Site-specific recombinase XerD [DNA replication, recombination, and repair] L probable integrase/recombinase protein similar to RV2894C 1.290269 1.672980 0.5238752 4166 ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism] E solute binding protein of ABC transporter system possibly for peptides - TRUE TRUE 91 TRUE 0.5005257 0.3150747 1.0425778 0.8228004 0.9373018 N 0.787079 0.6327252 21.21 0.15964308 0.33446838 0.15801332 0.087150867 FALSE 0.5 0.087150867 FALSE 0.058288844 0.6327252 0.24575136 0.4274908 206672 7164 281600 281601 1 301 Same + + 36.1812613 -1.67734912 0 1.010926e+02 91.0 1.290269 1.672980 0.5238752 4166 ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism] E solute binding protein of ABC transporter system possibly for peptides 1.895584 2.608419 0.8982273 601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP probable permease protein of ABC-transporter for peptides E TRUE TRUE 92 TRUE 3.2834534 3.0068413 0.4455524 0.8228004 1.0407775 Y 2.627081 0.9657475 21.86 0.13461566 0.95933498 0.13320089 0.785855500 TRUE 0.5 0.785855500 TRUE 0.469853786 0.9657475 0.85068944 0.9243604 206672 7164 281601 281602 1 19 Same + + 68.5517949 -4.30399684 0 3.679467e+02 91.0 1.895584 2.608419 0.8982273 601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP probable permease protein of ABC-transporter for peptides 1.680965 2.324997 0.8105868 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP probable permease protein of ABC-transporter for peptides EP TRUE TRUE 93 TRUE 3.5719317 3.4370840 0.4621201 0.8228004 1.0407775 Y 2.627081 0.9750039 6.03 0.74322595 0.97060602 0.74089103 0.989645588 TRUE 0.5 0.989645588 TRUE 0.949477503 0.9750039 0.86653804 0.9441545 206672 7164 281602 281603 1 23 Same + + 0.0000000 0.21791250 0 2.179125e-01 117.7 1.680965 2.324997 0.8105868 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP probable permease protein of ABC-transporter for peptides 1.430388 1.962583 0.6872125 1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] R probable ATP binding protein of ABC transporter for peptides TRUE TRUE 94 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.9373018 U 0.575520 0.7781751 6.41 0.71712198 0.67316710 0.71464083 0.839265713 TRUE 0.5 0.839265713 TRUE 0.731945000 0.7781751 0.51856222 0.6032538 206672 7164 281603 281604 1 105 Same + + 0.0000000 -4.30399684 0 1.912443e-01 117.7 1.430388 1.962583 0.6872125 1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] R probable ATP binding protein of ABC transporter for peptides 2.066158 2.763301 0.8775869 708 Exonuclease III [DNA replication, recombination, and repair] L possible exodeoxyribonuclease TRUE TRUE 95 TRUE 0.5005257 1.0583710 0.4621201 0.8228004 0.9373018 U 0.575520 0.6745554 13.64 0.49436150 0.44683818 0.49131244 0.441270102 FALSE 0.5 0.441270102 FALSE 0.320712616 0.6745554 0.32564609 0.4732355 206672 7164 281604 281605 1 68 Same + + 0.0000000 0.21791250 0 -4.041300e+00 NA 2.066158 2.763301 0.8775869 708 Exonuclease III [DNA replication, recombination, and repair] L possible exodeoxyribonuclease 1.724929 2.353097 0.8313753 - - - narrowly conserved hypothetical protein TRUE TRUE 96 TRUE 0.5005257 0.5557322 1.6513766 0.8228004 0.5528280 U 0.575520 0.6575951 10.64 0.56922517 0.40300015 0.56623144 0.471458720 FALSE 0.5 0.471458720 FALSE 0.354283884 0.6575951 0.29339500 0.4542715 206672 7164 281605 281606 1 16 Same + + 2.4608091 0.21791250 0 2.223700e-01 NA 1.724929 2.353097 0.8313753 - - - narrowly conserved hypothetical protein 2.635460 3.721155 1.0156430 - - - narrowly conserved hypothetical transmembrane protein TRUE TRUE 97 TRUE 1.8073321 1.6380653 1.6513766 0.8228004 0.5528280 U 0.575520 0.8328658 5.57 0.77800162 0.76991775 0.77588757 0.921427719 TRUE 0.5 0.921427719 TRUE 0.849857897 0.8328658 0.61761290 0.6835324 206672 7164 281606 281607 1 -49 Same + + 2.4129332 0.20686267 0 -1.627065e+00 NA 2.635460 3.721155 1.0156430 - - - narrowly conserved hypothetical transmembrane protein 2.087678 2.920304 0.9363050 2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis] J conserved hypothetical protein with duf90 TRUE TRUE 98 TRUE 1.6266309 0.3527274 1.0425778 0.8228004 0.5528280 U 0.575520 0.6579369 0.06 0.91057153 0.40390601 0.90957318 0.873406199 TRUE 0.5 0.873406199 TRUE 0.809200554 0.6579369 0.29404692 0.4546479 206672 7164 281607 281608 1 12 Same + + 0.0000000 0.20686267 0 2.068627e-01 NA 2.087678 2.920304 0.9363050 2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis] J conserved hypothetical protein with duf90 3.135012 4.311214 1.0862449 - - - hypothetical protein TRUE TRUE 99 TRUE 0.5005257 1.1250278 1.0425778 0.8228004 0.5528280 U 0.575520 0.6916772 5.09 0.81354257 0.48891288 0.81168505 0.806720443 TRUE 0.5 0.806720443 TRUE 0.708720495 0.6916772 0.35800872 0.4929880 206672 7164 281608 281609 1 91 Same + + 0.0000000 0.20686267 0 2.068627e-01 NA 3.135012 4.311214 1.0862449 - - - hypothetical protein 2.266069 3.192512 0.9529071 474 Cation transport ATPase [Inorganic ion transport and metabolism] P probable cation-transporting ATPase TRUE TRUE 100 TRUE 0.5005257 1.1250278 1.0425778 0.8228004 0.5528280 U 0.575520 0.6916772 12.62 0.53729082 0.48891288 0.53425675 0.526247116 TRUE 0.5 0.526247116 TRUE 0.393034015 0.6916772 0.35800872 0.4929880 206672 7164 281609 281610 1 121 Same + + 1.1962508 0.20686267 0 -3.207570e+00 117.7 2.266069 3.192512 0.9529071 474 Cation transport ATPase [Inorganic ion transport and metabolism] P probable cation-transporting ATPase 1.355726 1.835085 0.5990012 1048 Aconitase A [Energy production and conversion] C aconitate hydratase - TRUE TRUE 101 TRUE 0.9808364 0.5303906 1.0425778 0.8228004 0.9373018 N 0.787079 0.6878231 14.76 0.44880769 0.47962465 0.44579189 0.428729700 FALSE 0.5 0.428729700 FALSE 0.305493520 0.6878231 0.35074100 0.4884870 206672 7164 281610 281611 1 146 Same + + 0.0000000 0.01104984 0 1.104984e-02 NA 1.355726 1.835085 0.5990012 1048 Aconitase A [Energy production and conversion] C aconitate hydratase 2.533363 3.467181 0.9606171 - - - hypothetical protein with possible helix turn helix motif TRUE TRUE 102 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.5528280 U 0.575520 0.6376114 16.36 0.39408760 0.34835488 0.39117854 0.257990250 FALSE 0.5 0.257990250 FALSE 0.182199142 0.6376114 0.25514522 0.4326592 206672 7164 281611 281612 1 0 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.533363 3.467181 0.9606171 - - - hypothetical protein with possible helix turn helix motif 4.348810 5.935139 1.0214665 - - - hypothetical protein TRUE TRUE 103 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 2.87 0.89280330 0.04798152 0.89163020 0.295656515 FALSE 0.5 0.295656515 FALSE 0.409789701 0.5463485 0.07694943 0.3429683 206672 7164 281613 281614 1 90 Same - - 0.0000000 -1.66629928 0 -1.666299e+00 117.7 2.578553 3.552745 0.9602019 1479 Uncharacterized conserved protein [Function unknown] S hypothetical protein with similarity to z5950 product of Escherichia coli O157:H7 2.806038 3.886444 0.9030938 - - - hypothetical protein in acetyl transferase family FALSE TRUE 103 TRUE 0.5005257 0.3661941 0.4216961 0.8228004 0.9373018 U 0.575520 0.5796956 12.54 0.53986020 0.16870227 0.53682845 0.192309527 FALSE 0.5 0.192309527 FALSE 0.163427670 0.5796956 0.14273928 0.3741397 206672 7164 281614 281615 1 10 Same - - 0.0000000 -1.67734912 0 -1.677349e+00 117.7 2.806038 3.886444 0.9030938 - - - hypothetical protein in acetyl transferase family 2.244660 3.151631 0.8961905 2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] TK response regulator of two-component system FALSE TRUE 102 TRUE 0.5005257 0.3845509 0.4455524 0.8228004 0.9373018 U 0.575520 0.5838752 4.74 0.83508220 0.18286022 0.83339531 0.531208094 TRUE 0.5 0.531208094 TRUE 0.473712497 0.5838752 0.15092942 0.3781707 206672 7164 281615 281616 1 35 Same - - 1.7917595 0.20686267 0 3.225068e+00 117.7 2.244660 3.151631 0.8961905 2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] TK response regulator of two-component system 2.534256 3.484172 0.9388564 - - - atypical histidine kinase sensor of two-component system FALSE TRUE 101 TRUE 1.2420407 1.8408234 1.0425778 0.8228004 0.9373018 U 0.575520 0.8218016 7.44 0.63460519 0.75138378 0.63177191 0.839973482 TRUE 0.5 0.839973482 TRUE 0.720716809 0.8218016 0.59772512 0.6665405 206672 7164 281617 281618 1 181 Same + + 0.0000000 0.20686267 0 2.068627e-01 NA 2.888666 3.820646 0.9539951 - - - hypothetical protein 1.672107 2.214698 0.7684871 670 Integral membrane protein, interacts with FtsH [General function prediction only] R conserved hypothetical protein with MutT type domain TRUE TRUE 101 TRUE 0.5005257 1.1250278 1.0425778 0.8228004 0.5528280 U 0.575520 0.6916772 18.49 0.31352552 0.48891288 0.31090600 0.304058811 FALSE 0.5 0.304058811 FALSE 0.202990782 0.6916772 0.35800872 0.4929880 206672 7164 281618 281619 1 140 Same + + 0.0000000 0.20686267 0 -3.100560e-01 NA 1.672107 2.214698 0.7684871 670 Integral membrane protein, interacts with FtsH [General function prediction only] R conserved hypothetical protein with MutT type domain 2.210198 3.086052 0.9084993 - - - possible integral membrane protein with duf6 TRUE TRUE 102 TRUE 0.5005257 0.2599836 1.0425778 0.8228004 0.5528280 U 0.575520 0.5776271 16.01 0.40142721 0.16161936 0.39849960 0.114482505 FALSE 0.5 0.114482505 FALSE 0.097456692 0.5776271 0.13868123 0.3721552 206672 7164 281621 281622 1 11 Same + + 27.9535320 0.20686267 0 -8.431134e+00 117.7 1.965751 2.656037 0.8374422 621 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis] J widely conserved hypothetical protein in upf0004 2.201901 2.978524 0.8705998 324 tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] J tRNA delta(2)-isopentenylpyrophosphate transferase J TRUE TRUE 103 TRUE 3.1881521 0.7429287 1.0425778 0.8228004 0.9373018 Y 2.627081 0.8960275 4.90 0.82584160 0.86695771 0.82408010 0.968652181 TRUE 0.5 0.968652181 TRUE 0.927546967 0.8960275 0.72971304 0.7888193 206672 7164 281624 281625 1 153 Same + + 2.3025851 0.21791250 0 4.883412e+00 117.7 2.078014 2.861713 0.9103817 1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning] D cell division protein FtsK 2.031412 2.747068 0.8925582 558 Phosphatidylglycerophosphate synthase [Lipid metabolism] I CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase - TRUE TRUE 104 TRUE 1.5445981 1.9082649 1.6513766 0.8228004 0.9373018 N 0.787079 0.8690788 16.69 0.38657128 0.82727969 0.38368257 0.751143718 TRUE 0.5 0.751143718 TRUE 0.574946280 0.8690788 0.68218010 0.7420817 206672 7164 281625 281626 1 12 Same + + 3.7992275 0.21791250 0 1.857409e+01 NA 2.031412 2.747068 0.8925582 558 Phosphatidylglycerophosphate synthase [Lipid metabolism] I CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2.569416 3.586079 1.0341215 1546 Uncharacterized protein (competence- and mitomycin-induced) [General function prediction only] R CinA-like protein TRUE TRUE 105 TRUE 2.1154756 2.2469558 1.6513766 0.8228004 0.5528280 U 0.575520 0.8842452 5.09 0.81354257 0.84990747 0.81168505 0.961099499 TRUE 0.5 0.961099499 TRUE 0.914013365 0.8842452 0.70898468 0.7680331 206672 7164 281626 281627 1 6 Same + + 0.0000000 0.21791250 0 2.179125e-01 NA 2.569416 3.586079 1.0341215 1546 Uncharacterized protein (competence- and mitomycin-induced) [General function prediction only] R CinA-like protein 2.283752 3.249565 0.9716498 - - - possible DNA binding protein TRUE TRUE 106 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.5528280 U 0.575520 0.7565067 4.15 0.85918035 0.63096557 0.85769795 0.912524821 TRUE 0.5 0.912524821 TRUE 0.848596368 0.7565067 0.47879659 0.5738558 206672 7164 281627 281628 1 646 Same + + 0.0000000 -6.18820862 0 2.179125e-01 117.7 2.283752 3.249565 0.9716498 - - - possible DNA binding protein 1.889140 2.558635 0.8756285 468 RecA/RadA recombinase [DNA replication, recombination, and repair] L RecA protein TRUE TRUE 107 TRUE 0.5005257 1.3964727 0.5242227 0.8228004 0.9373018 U 0.575520 0.7190354 24.38 0.06895643 0.55198342 0.06817736 0.083620382 FALSE 0.5 0.083620382 FALSE 0.048817200 0.7190354 0.40931632 0.5258918 206672 7164 281628 281629 1 3 Same + + 19.3933488 0.00000000 0 3.307728e+01 117.7 1.889140 2.558635 0.8756285 468 RecA/RadA recombinase [DNA replication, recombination, and repair] L RecA protein 3.729168 5.262916 1.0960331 2137 Uncharacterized protein conserved in bacteria [General function prediction only] R RecX-like protein TRUE TRUE 108 TRUE 2.9269783 2.4244161 0.4201221 0.8228004 0.9373018 U 0.575520 0.8927625 3.66 0.87430856 0.86227788 0.87296187 0.977554040 TRUE 0.5 0.977554040 TRUE 0.948037894 0.8927625 0.72397719 0.7830028 206672 7164 281629 281630 1 180 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 3.729168 5.262916 1.0960331 2137 Uncharacterized protein conserved in bacteria [General function prediction only] R RecX-like protein 5.946295 8.083060 1.1479503 - - - hypothetical protein TRUE TRUE 109 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 18.41 0.31746208 0.04798152 0.31482476 0.022905008 FALSE 0.5 0.022905008 FALSE 0.037327056 0.5463485 0.07694943 0.3429683 206672 7164 281630 281631 1 131 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 5.946295 8.083060 1.1479503 - - - hypothetical protein 1.836500 2.558599 0.8480572 1544 Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis] J hypothetical protein in sigma 54 modulation protein / S30ea ribosomal protein family TRUE TRUE 110 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 15.36 0.42257215 0.04798152 0.41959843 0.035571467 FALSE 0.5 0.035571467 FALSE 0.057499569 0.5463485 0.07694943 0.3429683 206672 7164 281631 281632 1 162 Same + + 48.9552111 0.20686267 0 2.599070e+02 NA 1.836500 2.558599 0.8480572 1544 Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis] J hypothetical protein in sigma 54 modulation protein / S30ea ribosomal protein family 1.302483 1.766350 0.5729956 653 Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion] U preprotein translocase SecA subunit - TRUE TRUE 111 TRUE 3.4235507 3.3107876 1.0425778 0.8228004 0.5528280 N 0.787079 0.9470528 17.27 0.36529029 0.93589953 0.36246664 0.893650221 TRUE 0.5 0.893650221 TRUE 0.721907608 0.9470528 0.81852992 0.8857493 206672 7164 281632 281633 1 1254 Same + + 2.9957323 -4.30399684 0 -1.891989e+01 117.7 1.302483 1.766350 0.5729956 653 Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion] U preprotein translocase SecA subunit 1.632103 2.248664 0.7965494 547 Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] E anthranilate phosphoribosyltransferase 1 - TRUE TRUE 112 TRUE 1.9839891 0.8350487 0.4621201 0.8228004 0.9373018 N 0.787079 0.7423888 24.78 0.06222227 0.60214387 0.06151425 0.091256053 FALSE 0.5 0.091256053 FALSE 0.052031874 0.7423888 0.45272553 0.5553719 206672 7164 281636 281637 1 144 Same - - 2.3025851 0.21791250 0 5.696693e-01 117.7 2.546484 3.468765 0.9792827 515 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] RTKL probable serine-threonine protein kinase 3.050168 4.252148 1.0665556 142 Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism] H probably bifunctional short chain isoprenyl diphosphate synthase [includes: farnesyl pyrophosphate synthetase (Fpp synthetase) (dimethylallyltransferase); geranyltranstransferase ] - FALSE TRUE 112 TRUE 1.5445981 1.6469911 1.6513766 0.8228004 0.9373018 N 0.787079 0.8511123 16.25 0.39633291 0.79943056 0.39341804 0.723516225 TRUE 0.5 0.723516225 TRUE 0.549673948 0.8511123 0.65024623 0.7124534 206672 7164 281638 281639 1 203 Same + + 0.0000000 0.20686267 0 2.068627e-01 NA 3.671054 5.027851 1.0029386 - - - hypothetical protein 1.648527 2.239146 0.7828886 568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] K RNA polymerase principal sigma factor; sigma 70 TRUE TRUE 112 TRUE 0.5005257 1.1250278 1.0425778 0.8228004 0.5528280 U 0.575520 0.6916772 19.36 0.25858385 0.48891288 0.25625202 0.250171504 FALSE 0.5 0.250171504 FALSE 0.162824681 0.6916772 0.35800872 0.4929880 206672 7164 281639 281640 1 58 Same + + 2.4608091 0.21791250 0 -5.364019e-02 117.7 1.648527 2.239146 0.7828886 568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] K RNA polymerase principal sigma factor; sigma 70 1.733805 2.331056 0.7795026 187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] L DNA gyrase subunit B - TRUE TRUE 113 TRUE 1.8073321 0.2351304 1.6513766 0.8228004 0.9373018 N 0.787079 0.7316002 9.52 0.56991470 0.57936921 0.56692212 0.646042316 TRUE 0.5 0.646042316 TRUE 0.502681001 0.7316002 0.43271585 0.5415874 206672 7164 281640 281641 1 179 Same + + 0.0000000 -4.30399684 0 -5.364019e-02 117.7 1.733805 2.331056 0.7795026 187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] L DNA gyrase subunit B 2.688120 3.755026 1.0131276 738 Fucose permease [Carbohydrate transport and metabolism] G hypothetical protein - TRUE TRUE 114 TRUE 0.5005257 0.2351304 0.4621201 0.8228004 0.9373018 N 0.787079 0.5831632 18.32 0.32171830 0.18046272 0.31906215 0.094567225 FALSE 0.5 0.094567225 FALSE 0.076977631 0.5831632 0.14953507 0.3774820 206672 7164 281641 281642 1 74 Same + + 0.0000000 0.01104984 0 -3.474544e+00 117.7 2.688120 3.755026 1.0131276 738 Fucose permease [Carbohydrate transport and metabolism] G hypothetical protein 2.801940 3.908133 1.0125078 524 Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] G probable ribokinase G TRUE TRUE 115 TRUE 0.5005257 0.5377378 0.7590838 0.8228004 0.9373018 Y 2.627081 0.7806983 11.07 0.56190494 0.67792905 0.55889976 0.729713120 TRUE 0.5 0.729713120 TRUE 0.584592894 0.7806983 0.52317336 0.6067612 206672 7164 281642 281643 1 16 Same + + 0.0000000 0.01104984 0 -1.025647e+00 117.7 2.801940 3.908133 1.0125078 524 Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] G probable ribokinase 3.253444 4.512160 1.1123683 1201 Lhr-like helicases [General function prediction only] R ATP-dependent helicase II TRUE TRUE 116 TRUE 0.5005257 0.3060486 0.7590838 0.8228004 0.9373018 U 0.575520 0.5942383 5.57 0.77800162 0.21710552 0.77588757 0.492861516 FALSE 0.5 0.492861516 FALSE 0.419895543 0.5942383 0.17118378 0.3882895 206672 7164 281644 281645 1 145 Same - - 0.0000000 0.01104984 0 1.104984e-02 117.7 3.039157 4.184757 1.0797313 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK hypothetical protein with response regulator receiver domain 2.032368 2.817070 0.9012567 188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair] L DNA gyrase subunit A - FALSE TRUE 116 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.9373018 N 0.787079 0.6823035 16.30 0.39531526 0.46613970 0.39240301 0.363391878 FALSE 0.5 0.363391878 FALSE 0.252199989 0.6823035 0.34031528 0.4820966 206672 7164 281648 281649 1 0 Same + + 2.4608091 0.21791250 0 5.037211e+01 NA 2.059812 2.732523 0.9046132 - - - narrowly conserved hypothetical protein similar to Mycobacterium tuberculosis RV2699C 2.224732 3.089067 0.9852997 756 dUTPase [Nucleotide transport and metabolism] F deoxyuridine 5'-triphosphate nucleotidohydrolase TRUE TRUE 116 TRUE 1.8073321 2.6594550 1.6513766 0.8228004 0.5528280 U 0.575520 0.8993895 2.87 0.89280330 0.87174093 0.89163020 0.982641140 TRUE 0.5 0.982641140 TRUE 0.958631553 0.8993895 0.73561248 0.7948542 206672 7164 281649 281650 1 113 Same + + 3.5835189 0.20686267 0 -1.662597e+01 117.7 2.224732 3.089067 0.9852997 756 dUTPase [Nucleotide transport and metabolism] F deoxyuridine 5'-triphosphate nucleotidohydrolase 1.900365 2.596925 0.8541982 317 Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription] TK GTP pyrophosphokinase - TRUE TRUE 117 TRUE 2.0757748 0.8308784 1.0425778 0.8228004 0.9373018 N 0.787079 0.7758988 14.06 0.47799852 0.66884464 0.47495558 0.649058063 TRUE 0.5 0.649058063 TRUE 0.492387783 0.7758988 0.51439891 0.6001050 206672 7164 281651 281652 1 64 Same - - 0.0000000 -1.66629928 0 -1.666299e+00 NA 1.398024 1.833678 0.7351117 652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] O possible peptidyl-prolyl cis-trans isomerase 2.897636 3.834844 1.0173975 - - - hypothetical protein FALSE TRUE 117 TRUE 0.5005257 0.3661941 0.4216961 0.8228004 0.5528280 U 0.575520 0.5498546 10.18 0.56980657 0.06136290 0.56681381 0.079690368 FALSE 0.5 0.079690368 FALSE 0.108187721 0.5498546 0.08390385 0.3461652 206672 7164 281652 281653 1 384 Same - - 0.0000000 -6.18820862 0 -1.666299e+00 NA 2.897636 3.834844 1.0173975 - - - hypothetical protein 2.311275 3.163477 0.9160816 - - - widely conserved hypothetical transmembrane protein with duf6 FALSE TRUE 116 TRUE 0.5005257 0.3661941 0.5242227 0.8228004 0.5528280 U 0.575520 0.5569445 23.10 0.09656282 0.08790729 0.09550384 0.010196401 FALSE 0.5 0.010196401 FALSE 0.011471630 0.5569445 0.09793987 0.3526864 206672 7164 281656 281657 1 115 Same + + 0.0000000 0.21791250 0 -2.936725e+00 117.7 2.429282 3.309976 0.9329804 406 Fructose-2,6-bisphosphatase [Carbohydrate transport and metabolism] G possible phosphoglycerate mutase 1.884397 2.535576 0.8397512 598 Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] P possible magnesium and cobalt transport protein - TRUE TRUE 116 TRUE 0.5005257 0.5088781 1.6513766 0.8228004 0.9373018 N 0.787079 0.6953292 14.27 0.46987707 0.49761922 0.46683960 0.467505616 FALSE 0.5 0.467505616 FALSE 0.337410407 0.6953292 0.36488636 0.4972830 206672 7164 281657 281658 1 15 Same + + 0.0000000 0.21791250 0 2.179125e-01 117.7 1.884397 2.535576 0.8397512 598 Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] P possible magnesium and cobalt transport protein 3.345494 4.553042 1.0867117 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET solute binding protein of ABC transporter system - TRUE TRUE 117 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.9373018 N 0.787079 0.7913345 5.41 0.79032313 0.69766852 0.78829448 0.896886066 TRUE 0.5 0.896886066 TRUE 0.817209380 0.7913345 0.54256665 0.6217461 206672 7164 281658 281659 1 43 Same + + 0.0000000 0.21791250 0 2.179125e-01 117.7 3.345494 4.553042 1.0867117 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET solute binding protein of ABC transporter system 1.363625 1.836235 0.6111643 495 Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J leucyl-tRNA synthetase - TRUE TRUE 118 TRUE 0.5005257 1.3964727 1.6513766 0.8228004 0.9373018 N 0.787079 0.7913345 7.97 0.60510381 0.69766852 0.60218517 0.779541622 TRUE 0.5 0.779541622 TRUE 0.645074260 0.7913345 0.54256665 0.6217461 206672 7164 281659 281660 1 161 Same + + 0.0000000 0.21791250 0 -1.287121e-01 117.7 1.363625 1.836235 0.6111643 495 Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J leucyl-tRNA synthetase 3.641899 4.921320 1.0673809 - - - hypothetical protein with C-terminal helix hairpin helix domain like that in ComE TRUE TRUE 119 TRUE 0.5005257 0.2426409 1.6513766 0.8228004 0.9373018 U 0.575520 0.6444891 17.14 0.37100159 0.36754438 0.36815940 0.255272197 FALSE 0.5 0.255272197 FALSE 0.177849948 0.6444891 0.26834015 0.4400104 206672 7164 281660 281661 1 63 Same + + 0.0000000 0.20686267 0 2.068627e-01 NA 3.641899 4.921320 1.0673809 - - - hypothetical protein with C-terminal helix hairpin helix domain like that in ComE 4.135819 5.857427 1.1222242 - - - conserved hypothetical transmembrane protein related to ComA TRUE TRUE 120 TRUE 0.5005257 1.1250278 1.0425778 0.8228004 0.5528280 U 0.575520 0.6916772 10.02 0.56906536 0.48891288 0.56607137 0.558156372 TRUE 0.5 0.558156372 TRUE 0.424096636 0.6916772 0.35800872 0.4929880 206672 7164 281661 281662 1 140 Same + + 0.0000000 0.00000000 0 -1.958229e+00 NA 4.135819 5.857427 1.1222242 - - - conserved hypothetical transmembrane protein related to ComA 2.943373 4.047116 1.0096638 1228 Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism] Q possible prolidase (X-Pro dipeptidase) or chlorohydrolase TRUE TRUE 121 TRUE 0.5005257 0.4247466 0.4201221 0.8228004 0.5528280 U 0.575520 0.5580233 16.01 0.40142721 0.09188709 0.39849960 0.063546371 FALSE 0.5 0.063546371 FALSE 0.069400026 0.5580233 0.10007240 0.3536854 206672 7164 281662 281663 1 163 Same + + 0.0000000 0.01104984 0 -3.789960e+00 117.7 2.943373 4.047116 1.0096638 1228 Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism] Q possible prolidase (X-Pro dipeptidase) or chlorohydrolase 2.839802 3.871802 0.9669334 1466 DNA polymerase III, delta subunit [DNA replication, recombination, and repair] L hypothetical protein with possible DNA binding function - TRUE TRUE 122 TRUE 0.5005257 0.5481724 0.7590838 0.8228004 0.9373018 N 0.787079 0.6451916 17.34 0.36232602 0.36948147 0.35951231 0.249791480 FALSE 0.5 0.249791480 FALSE 0.173431754 0.6451916 0.26968613 0.4407664 206672 7164 281663 281664 1 106 Same + + 0.0000000 0.00000000 0 0.000000e+00 117.7 2.839802 3.871802 0.9669334 1466 DNA polymerase III, delta subunit [DNA replication, recombination, and repair] L hypothetical protein with possible DNA binding function 3.110293 4.300337 1.0312875 1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] O hypothetical protein - TRUE TRUE 123 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.9373018 N 0.787079 0.5951492 13.71 0.49139534 0.22005880 0.48834691 0.214207804 FALSE 0.5 0.214207804 FALSE 0.168092000 0.5951492 0.17296062 0.3891876 206672 7164 281664 281665 1 -22 Same + + 0.0000000 0.00000000 0 0.000000e+00 117.7 3.110293 4.300337 1.0312875 1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] O hypothetical protein 2.661088 3.696802 1.0232633 456 Acetyltransferases [General function prediction only] R probable ribosomal-protein-alanine N-acetyltransferase TRUE TRUE 124 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.9373018 U 0.575520 0.5762428 0.27 0.91120562 0.15685113 0.91021365 0.656243596 TRUE 0.5 0.656243596 TRUE 0.617563740 0.5762428 0.13596393 0.3708310 206672 7164 281665 281666 1 -3 Same + + 11.6796539 0.21791250 0 4.621745e+01 117.7 2.661088 3.696802 1.0232633 456 Acetyltransferases [General function prediction only] R probable ribosomal-protein-alanine N-acetyltransferase 1.635249 2.257118 0.7832225 533 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] O metalloendopeptidase Gcp TRUE TRUE 125 TRUE 2.6917014 2.5992770 1.6513766 0.8228004 0.9373018 U 0.575520 0.9243977 1.71 0.90812607 0.90622887 0.90710321 0.989640120 TRUE 0.5 0.989640120 TRUE 0.972144348 0.9243977 0.77928465 0.8412600 206672 7164 2194471 2194472 1 44 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA NA NA NA NA NA NA FALSE TRUE 125 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 8.08 0.60122603 0.04798152 0.59829775 0.070620780 FALSE 0.5 0.070620780 FALSE 0.111653708 0.5463485 0.07694943 0.3429683 206672 7164 281668 281669 1 19 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 3.375979 4.592100 1.0855934 - - - hypothetical protein 3.175907 4.371044 1.0733663 2253 Uncharacterized conserved protein [Function unknown] S hypothetical protein FALSE TRUE 124 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 6.03 0.74322595 0.04798152 0.74089103 0.127308925 FALSE 0.5 0.127308925 FALSE 0.194390199 0.5463485 0.07694943 0.3429683 206672 7164 281669 281670 1 -13 Same - - 11.0525394 0.00000000 0 1.463606e+01 NA 3.175907 4.371044 1.0733663 2253 Uncharacterized conserved protein [Function unknown] S hypothetical protein 2.614685 3.607416 0.9871180 - - - hypothetical protein FALSE TRUE 123 TRUE 2.6564434 2.1510492 0.4201221 0.8228004 0.5528280 U 0.575520 0.8547355 0.48 0.91163686 0.80514096 0.91064924 0.977079309 TRUE 0.5 0.977079309 TRUE 0.951773484 0.8547355 0.65670195 0.7183342 206672 7164 281670 281671 1 26 Same - - 0.0000000 0.01104984 0 1.104984e-02 NA 2.614685 3.607416 0.9871180 - - - hypothetical protein 3.208077 4.403612 1.0676779 3177 Uncharacterized conserved protein [Function unknown] S hypothetical protein with similarity to ZK593.8 protein of C. elegans FALSE TRUE 122 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.5528280 U 0.575520 0.6376114 6.79 0.68692326 0.34835488 0.68429383 0.539789646 TRUE 0.5 0.539789646 TRUE 0.429085772 0.6376114 0.25514522 0.4326592 206672 7164 281671 281672 1 162 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 3.208077 4.403612 1.0676779 3177 Uncharacterized conserved protein [Function unknown] S hypothetical protein with similarity to ZK593.8 protein of C. elegans 2.331787 3.066621 0.8562030 - - - hypothetical protein FALSE TRUE 121 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 17.27 0.36529029 0.04798152 0.36246664 0.028188603 FALSE 0.5 0.028188603 FALSE 0.045781569 0.5463485 0.07694943 0.3429683 206672 7164 281672 281673 1 40 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.331787 3.066621 0.8562030 - - - hypothetical protein 2.423420 3.315866 0.9321615 - - - hypothetical protein FALSE TRUE 120 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 7.75 0.61506302 0.04798152 0.61217081 0.074528379 FALSE 0.5 0.074528379 FALSE 0.117544590 0.5463485 0.07694943 0.3429683 206672 7164 281673 281674 1 16 Same - - 0.0000000 0.01104984 0 1.104984e-02 NA 2.423420 3.315866 0.9321615 - - - hypothetical protein 2.112069 2.895758 0.8587718 - - - hypothetical protein FALSE TRUE 119 TRUE 0.5005257 0.8390215 0.7590838 0.8228004 0.5528280 U 0.575520 0.6376114 5.57 0.77800162 0.34835488 0.77588757 0.651985948 TRUE 0.5 0.651985948 TRUE 0.545548908 0.6376114 0.25514522 0.4326592 206672 7164 281674 281675 1 26 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.112069 2.895758 0.8587718 - - - hypothetical protein 2.395295 3.232957 0.8735718 - - - hypothetical protein FALSE TRUE 118 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 6.79 0.68692326 0.04798152 0.68429383 0.099571537 FALSE 0.5 0.099571537 FALSE 0.154627103 0.5463485 0.07694943 0.3429683 206672 7164 281675 281676 1 158 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.395295 3.232957 0.8735718 - - - hypothetical protein 2.920601 3.978088 1.0053320 3942 Surface antigen [General function prediction only] R possible TraG-related protein FALSE TRUE 117 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 16.91 0.38002453 0.04798152 0.37715467 0.029967599 FALSE 0.5 0.029967599 FALSE 0.048615322 0.5463485 0.07694943 0.3429683 206672 7164 281676 281677 1 578 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.920601 3.978088 1.0053320 3942 Surface antigen [General function prediction only] R possible TraG-related protein 2.880574 3.908081 0.9548434 - - - hypothetical protein FALSE TRUE 116 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 24.26 0.07110775 0.04798152 0.07030621 0.003843332 FALSE 0.5 0.003843332 FALSE 0.006341161 0.5463485 0.07694943 0.3429683 206672 7164 281678 281679 1 233 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.693912 3.689178 0.9621014 550 Topoisomerase IA [DNA replication, recombination, and repair] L DNA topoisomerase III 6.765886 9.103088 1.0451999 - - - hypothetical protein TRUE TRUE 116 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 20.45 0.19380010 0.04798152 0.19190126 0.011970431 FALSE 0.5 0.011970431 FALSE 0.019645996 0.5463485 0.07694943 0.3429683 206672 7164 281680 281681 1 52 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 3.248821 4.587749 1.0322389 - - - hypothetical protein 2.256499 3.018653 0.8188680 - - - type II restriction enzyme very similar to EcoRII; endonuclease FALSE TRUE 116 TRUE 0.5005257 0.3422228 0.4201221 0.8228004 0.5528280 U 0.575520 0.5463485 8.91 0.58376617 0.04798152 0.58079908 0.066018892 FALSE 0.5 0.066018892 FALSE 0.104679140 0.5463485 0.07694943 0.3429683 206672 7164 281681 281682 1 46 Same - - 10.3709881 0.01104984 0 1.387604e+01 NA 2.256499 3.018653 0.8188680 - - - type II restriction enzyme very similar to EcoRII; endonuclease 2.284224 3.040204 0.8378016 270 Site-specific DNA methylase [DNA replication, recombination, and repair] L modification methylase very similar to EcoRII (cytosine-specificmethyltransferase FALSE TRUE 115 TRUE 2.6283156 2.1301070 0.7590838 0.8228004 0.5528280 U 0.575520 0.8638806 8.23 0.59688379 0.81934127 0.59394516 0.870387403 TRUE 0.5 0.870387403 TRUE 0.752893652 0.8638806 0.67296093 0.7333880 206672 7164 281682 281683 1 129 Same - - 0.0000000 0.01104984 0 -2.449631e-01 117.7 2.284224 3.040204 0.8378016 270 Site-specific DNA methylase [DNA replication, recombination, and repair] L modification methylase very similar to EcoRII (cytosine-specificmethyltransferase 2.505225 3.478015 0.9160661 - - - narrowly conserved hypothetical protein FALSE TRUE 114 TRUE 0.5005257 0.2545055 0.7590838 0.8228004 0.9373018 U 0.575520 0.5871083 15.25 0.42719780 0.19367403 0.42421545 0.151922064 FALSE 0.5 0.151922064 FALSE 0.122165963 0.5871083 0.15725658 0.3813085 206672 7164 281685 281686 1 222 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 3.002356 4.123686 1.0603288 3550 Uncharacterized protein related to capsule biosynthesis enzymes [General function prediction only] R conserved hypothetical protein 2.535450 3.398805 0.8798766 - - - hypothetical protein FALSE