Taxon Scaffold Gene1 Gene2 Consecutive Sep Code Strand1 Strand2 GNScore GNWithin GNAll GNMinus GOScore CAI CAI.Alm CBI COG COGanno COGfun Description nCAI nCAI.Alm nCBI nCOG nCOGanno nCOGfun nDescription COGsim forward forwardplus sumBias same bbfGNScore bbfGNMinus bbfGNWithin bbfGNAll bbfGOScore COGsimClass cfCOG pSame groupIndexD pSameD pOpLogistic pOpDistance pOp1 bOp1 pCAI pOp bOp pOp2 pSame pOpLogisticLike pOpLogisticM 288681 595 648947 648948 1 179 Same + + 147.9481223 423.086002344 0 8.459185e+02 327.1 1.765856 2.836270 0.8499982 593 ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] L chromosomal replication initiator protein 1.568719 2.530892 0.8533473 592 DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] L DNA polymerase III, beta subunit L TRUE TRUE 1 TRUE 4.0023313 4.2306988 4.1790176 0.8514785 1.0724158 Y 2.5887034 0.9884050 29.11616162 0.300427835 0.98377075 0.229666912 9.630064e-01 TRUE 0.5 9.630064e-01 TRUE 0.7743908444 0.9884050 0.88879922 0.9619028 288681 595 648948 648949 1 116 Same + + 22.1887257 1.424474418 0 5.987123e+01 327.1 1.568719 2.530892 0.8533473 592 DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] L DNA polymerase III, beta subunit 1.680725 2.684957 0.9461296 2501 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein TRUE TRUE 2 TRUE 3.8269692 3.0585979 1.6993995 0.8514785 1.0724158 U 0.6519531 0.9380659 23.70707071 0.456252244 0.90866035 0.368101235 8.930181e-01 TRUE 0.5 8.930181e-01 TRUE 0.7692132087 0.9380659 0.79888072 0.8177239 288681 595 648949 648950 1 13 Same + + 25.2797681 30.516899517 0 6.998630e+01 327.1 1.680725 2.684957 0.9461296 2501 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein 1.984350 3.124417 0.8998611 1195 Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair] L DNA replication and repair protein TRUE TRUE 3 TRUE 3.8568486 3.1454945 3.3315457 0.8514785 1.0724158 U 0.6519531 0.9736019 9.23232323 0.901297905 0.96248938 0.863750725 9.957502e-01 TRUE 0.5 9.957502e-01 TRUE 0.9828650734 0.9736019 0.86266738 0.9161356 288681 595 648950 648951 1 39 Same + + 45.8064743 29.096305358 0 1.615854e+02 13.0 1.984350 3.124417 0.8998611 1195 Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair] L DNA replication and repair protein 1.652074 2.629025 0.8798565 187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] L DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit B) L TRUE TRUE 4 TRUE 3.9622954 3.6575536 3.3167326 0.8514785 2.9821921 Y 2.5887034 0.9902599 15.43434343 0.719741004 0.98639248 0.640663642 9.946570e-01 TRUE 0.5 9.946570e-01 TRUE 0.9550017776 0.9902599 0.89205567 0.9678593 288681 595 648951 648952 1 89 Same + + 62.5910553 42.699347971 0 2.039341e+02 7.0 1.652074 2.629025 0.8798565 187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] L DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit B) 1.559111 2.495977 0.8517057 188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair] L DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit A) L TRUE TRUE 5 TRUE 3.9844162 3.7564799 3.5531056 0.8514785 3.3558478 Y 2.5887034 0.9921607 20.61616162 0.488627985 0.98906909 0.398809625 9.885661e-01 TRUE 0.5 9.885661e-01 TRUE 0.8910499954 0.9921607 0.89538879 0.9740171 288681 595 648952 595204 1 270 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.559111 2.495977 0.8517057 188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair] L DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit A) NA NA NA TRUE TRUE 6 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 33.38888889 0.084100788 0.10149799 0.059927474 1.026619e-02 FALSE 0.5 1.026619e-02 FALSE 0.0124898481 0.6062567 0.12106533 0.3132127 288681 595 595204 595207 1 402 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 7 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 37.01515152 0.021437593 0.10149799 0.014981120 2.468610e-03 FALSE 0.5 2.468610e-03 FALSE 0.0030084458 0.6062567 0.12106533 0.3132127 288681 595 595207 595208 1 48 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 8 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 16.27777778 0.666905445 0.10149799 0.581586687 1.844524e-01 FALSE 0.5 1.844524e-01 FALSE 0.2161646928 0.6062567 0.12106533 0.3132127 288681 595 648959 648960 1 114 Same + + 0.0000000 -6.780558507 0 -1.000284e+01 327.1 1.462707 2.381408 0.8604276 516 IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism] F IMP dehydrogenase (inositol-monophosphate dehydrogenase) 1.527945 2.487887 0.8529471 1686 D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane] M serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine carboxypeptidase) - TRUE TRUE 9 TRUE 0.5353044 0.5469406 0.4539071 0.8514785 1.0724158 N 0.9519411 0.6346445 23.53535354 0.457627168 0.20357018 0.369390978 1.774052e-01 FALSE 0.5 1.774052e-01 FALSE 0.1612756033 0.6346445 0.18559837 0.3397178 288681 595 648960 648961 1 162 Same + + 0.0000000 -7.813914981 0 -7.018027e+00 327.1 1.527945 2.487887 0.8529471 1686 D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane] M serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine carboxypeptidase) 1.457578 2.388876 0.8495212 214 Pyridoxine biosynthesis enzyme [Coenzyme metabolism] H 4-hydroxythreonine-4-phosphate dehydrogenase (pyridoxine biosynthesis protein) - TRUE TRUE 10 TRUE 0.5353044 0.5377591 0.4485272 0.8514785 1.0724158 N 0.9519411 0.6345437 27.94444444 0.368161766 0.20322385 0.288015355 1.293885e-01 FALSE 0.5 1.293885e-01 FALSE 0.1170693079 0.6345437 0.18537160 0.3396203 288681 595 648961 648962 1 19 Same + + 90.6819143 32.430612103 0 2.552507e+02 327.1 1.457578 2.388876 0.8495212 214 Pyridoxine biosynthesis enzyme [Coenzyme metabolism] H 4-hydroxythreonine-4-phosphate dehydrogenase (pyridoxine biosynthesis protein) 1.485276 2.417510 0.8493008 311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] H GMP synthase, glutamine-hydrolyzing (glutamine amidotransferase) H TRUE TRUE 11 TRUE 4.0000431 3.8567625 3.3737223 0.8514785 1.0724158 Y 2.5887034 0.9837846 11.92424242 0.856531624 0.97719705 0.805627497 9.961066e-01 TRUE 0.5 9.961066e-01 TRUE 0.9778077115 0.9837846 0.88067014 0.9472848 288681 595 648962 648963 1 328 Same + + 6.0836448 -56.379646858 0 -2.842203e+01 327.1 1.485276 2.417510 0.8493008 311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] H GMP synthase, glutamine-hydrolyzing (glutamine amidotransferase) 1.566786 2.479279 0.8587578 172 Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J serine--tRNA ligase (seryl-tRNA synthetase) - TRUE TRUE 12 TRUE 3.2576756 0.5688583 0.3629089 0.8514785 1.0724158 N 0.9519411 0.9140845 35.41919192 0.039948449 0.86996881 0.028076922 2.177692e-01 FALSE 0.5 2.177692e-01 FALSE 0.1136396442 0.9140845 0.75497159 0.7591112 288681 595 648963 648965 1 258 Same + + 0.0000000 -7.686556257 0 1.897531e-01 327.1 1.566786 2.479279 0.8587578 172 Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J serine--tRNA ligase (seryl-tRNA synthetase) 1.759934 2.803329 0.9073471 - - - group-specific protein TRUE TRUE 13 TRUE 0.5353044 0.4967286 0.4491123 0.8514785 1.0724158 U 0.6519531 0.6165390 32.86868687 0.100134122 0.13955484 0.071713141 1.772792e-02 FALSE 0.5 1.772792e-02 FALSE 0.0184630315 0.6165390 0.14459800 0.3225969 288681 595 648966 648967 1 3 Same - - 6.3397712 15.057840986 0 2.684438e+01 7.0 1.629534 2.586266 0.8763831 1428 Deoxynucleoside kinases [Nucleotide transport and metabolism] F deoxynucleoside kinase 1.874205 2.948939 0.9307615 1428 Deoxynucleoside kinases [Nucleotide transport and metabolism] F deoxyguanosine kinase F FALSE TRUE 13 TRUE 3.2752130 2.6243684 2.8680394 0.8514785 3.3558478 Y 2.5887034 0.9864613 6.79797980 0.917490510 0.98101292 0.885319373 9.982625e-01 TRUE 0.5 9.982625e-01 TRUE 0.9884921265 0.9864613 0.88538261 0.9557156 288681 595 648967 648968 1 126 Same - - 0.0000000 -4.151332079 0 -4.269115e+00 327.1 1.874205 2.948939 0.9307615 1428 Deoxynucleoside kinases [Nucleotide transport and metabolism] F deoxyguanosine kinase 2.133757 3.457695 0.8801771 1335 Amidases related to nicotinamidase [Secondary metabolites biosynthesis, transport, and catabolism] Q nicotinamidase (pyrazinamidase) - FALSE TRUE 12 TRUE 0.5353044 0.5231521 0.4744376 0.8514785 1.0724158 N 0.9519411 0.6387474 24.83333333 0.443833360 0.21757203 0.356508587 1.816080e-01 FALSE 0.5 1.816080e-01 FALSE 0.1618326011 0.6387474 0.19481266 0.3437077 288681 595 648969 648970 1 477 Same + + 9.2536991 -52.438078623 0 -3.101043e+00 327.1 1.832933 2.888656 0.9029391 590 Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis] FJ probable cytidine/deoxycytidylate deaminase family protein 1.917523 3.025647 0.9447130 2812 DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] L DNA polymerase III, gamma and tau subunits - TRUE TRUE 12 TRUE 3.4687155 0.5084662 0.3641889 0.8514785 1.0724158 N 0.9519411 0.9259847 38.00000000 0.014401238 0.88941908 0.010042193 1.051645e-01 FALSE 0.5 1.051645e-01 FALSE 0.0484048758 0.9259847 0.77684879 0.7874863 288681 595 648970 648971 1 23 Same + + 54.3080161 49.671487438 0 1.149516e+02 327.1 1.917523 3.025647 0.9447130 2812 DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] L DNA polymerase III, gamma and tau subunits 1.382463 2.159098 0.9005977 718 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein TRUE TRUE 13 TRUE 3.9741617 3.4330695 3.5865050 0.8514785 1.0724158 U 0.6519531 0.9770034 13.06565657 0.825832682 0.96743659 0.766999256 9.929513e-01 TRUE 0.5 9.929513e-01 TRUE 0.9691069000 0.9770034 0.86869467 0.9263820 288681 595 648971 648972 1 15 Same + + 174.0066479 462.421608080 0 9.286652e+02 327.1 1.382463 2.159098 0.9005977 718 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein 1.856818 2.964708 0.9461382 353 Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] L recombination protein TRUE TRUE 14 TRUE 3.9980860 4.2621069 4.2180457 0.8514785 1.0724158 U 0.6519531 0.9798579 10.24242424 0.888318768 0.97156163 0.846674136 9.963335e-01 TRUE 0.5 9.963335e-01 TRUE 0.9821570220 0.9798579 0.87374216 0.9351026 288681 595 648972 648973 1 15 Same + + 1.3545457 14.751524605 0 1.610607e+01 NA 1.856818 2.964708 0.9461382 353 Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] L recombination protein 1.785349 2.641683 0.9825579 - - - conserved hypothetical protein TRUE TRUE 15 TRUE 2.5336980 2.3548574 2.8522910 0.8514785 0.6429928 U 0.6519531 0.9266861 10.24242424 0.888318768 0.89054987 0.846674136 9.847837e-01 TRUE 0.5 9.847837e-01 TRUE 0.9653936889 0.9266861 0.77813275 0.7892013 288681 595 648973 648974 1 216 Same + + 0.0000000 5.628990318 0 5.628990e+00 NA 1.785349 2.641683 0.9825579 - - - conserved hypothetical protein 1.794478 3.075778 1.0476319 - - - sigma-K factor processing regulatory protein TRUE TRUE 16 TRUE 0.5353044 1.8560167 2.3465359 0.8514785 0.6429928 U 0.6519531 0.7359607 31.12626263 0.181416943 0.50366337 0.133344159 1.836033e-01 FALSE 0.5 1.836033e-01 FALSE 0.1311793283 0.7359607 0.40521204 0.4522293 288681 595 648974 595226 1 246 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.794478 3.075778 1.0476319 - - - sigma-K factor processing regulatory protein NA NA NA TRUE TRUE 17 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 32.33333333 0.119572734 0.10149799 0.086162788 1.511001e-02 FALSE 0.5 1.511001e-02 FALSE 0.0183633806 0.6062567 0.12106533 0.3132127 288681 595 595226 595229 1 402 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 18 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 37.01515152 0.021437593 0.10149799 0.014981120 2.468610e-03 FALSE 0.5 2.468610e-03 FALSE 0.0030084458 0.6062567 0.12106533 0.3132127 288681 595 595229 595230 1 48 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 19 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 16.27777778 0.666905445 0.10149799 0.581586687 1.844524e-01 FALSE 0.5 1.844524e-01 FALSE 0.2161646928 0.6062567 0.12106533 0.3132127 288681 595 595230 648980 1 440 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 1.859020 2.996838 0.8742786 1982 Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism] E lysine decarboxylase TRUE TRUE 20 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 37.53030303 0.017418765 0.10149799 0.012157626 1.998566e-03 FALSE 0.5 1.998566e-03 FALSE 0.0024358634 0.6062567 0.12106533 0.3132127 288681 595 648980 648981 1 2 Same + + 1.1727203 20.484184354 0 2.237612e+01 327.1 1.859020 2.996838 0.8742786 1982 Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism] E lysine decarboxylase 1.674733 2.641476 0.8808154 125 Thymidylate kinase [Nucleotide transport and metabolism] F thymidylate kinase - TRUE TRUE 21 TRUE 2.4960937 2.5246645 3.0873558 0.8514785 1.0724158 N 0.9519411 0.9425883 6.38383838 0.917967056 0.91573625 0.885958633 9.918440e-01 TRUE 0.5 9.918440e-01 TRUE 0.9790860598 0.9425883 0.80708247 0.8294360 288681 595 648981 648982 1 36 Same + + 45.9096044 50.366609641 0 1.692557e+02 327.1 1.674733 2.641476 0.8808154 125 Thymidylate kinase [Nucleotide transport and metabolism] F thymidylate kinase 2.166724 3.420615 0.9507314 2812 DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] L DNA polymerase III, delta prime subunit - TRUE TRUE 22 TRUE 3.9632766 3.6788263 3.5916583 0.8514785 1.0724158 N 0.9519411 0.9773733 15.09595960 0.735734872 0.96797247 0.659032432 9.882551e-01 TRUE 0.5 9.882551e-01 TRUE 0.9487842423 0.9773733 0.86934925 0.9275057 288681 595 648982 648983 1 -3 Same + + 24.9686354 28.743491216 0 6.801068e+01 NA 2.166724 3.420615 0.9507314 2812 DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] L DNA polymerase III, delta prime subunit 1.856807 2.913092 0.8757985 1774 Uncharacterized homolog of PSP1 [Function unknown] S signal peptidase-like protein TRUE TRUE 23 TRUE 3.8505269 3.1309055 3.3068783 0.8514785 0.6429928 U 0.6519531 0.9700314 4.11111111 0.911770020 0.95725917 0.877665818 9.956980e-01 TRUE 0.5 9.956980e-01 TRUE 0.9840237503 0.9700314 0.85632619 0.9055466 288681 595 648983 648984 1 0 Same + + 15.9195325 20.328683727 0 5.265817e+01 NA 1.856807 2.913092 0.8757985 1774 Uncharacterized homolog of PSP1 [Function unknown] S signal peptidase-like protein 1.841258 2.786954 0.8791577 4467 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein TRUE TRUE 24 TRUE 3.7010163 3.0109904 3.0755576 0.8514785 0.6429928 U 0.6519531 0.9637629 5.52525253 0.917434052 0.94798300 0.885243655 9.950860e-01 TRUE 0.5 9.950860e-01 TRUE 0.9837789882 0.9637629 0.84515697 0.8873563 288681 595 648984 648985 1 121 Same + + 2.4192564 19.623517629 0 1.872721e+01 NA 1.841258 2.786954 0.8791577 4467 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein 1.745231 2.777977 0.8696457 4123 Predicted O-methyltransferase [General function prediction only] R conserved hypothetical protein; possible methyltransferase TRUE TRUE 25 TRUE 2.8123739 2.4377526 3.0520452 0.8514785 0.6429928 U 0.6519531 0.9434682 24.32323232 0.451025414 0.91710507 0.363209704 9.008870e-01 TRUE 0.5 9.008870e-01 TRUE 0.7764153145 0.9434682 0.80867535 0.8317405 288681 595 648985 648986 1 -13 Same + + 5.8055652 29.020279462 0 9.288461e+01 NA 1.745231 2.777977 0.8696457 4123 Predicted O-methyltransferase [General function prediction only] R conserved hypothetical protein; possible methyltransferase 1.841416 2.896527 0.8808190 2827 Predicted endonuclease containing a URI domain [DNA replication, recombination, and repair] L excinuclease ABC, C subunit TRUE TRUE 26 TRUE 3.2417664 3.2886698 3.3142674 0.8514785 0.6429928 U 0.6519531 0.9534854 1.79292929 0.886156354 0.93251030 0.843847125 9.907878e-01 TRUE 0.5 9.907878e-01 TRUE 0.9737832536 0.9534854 0.82674373 0.8585881 288681 595 648986 648987 1 -31 Same + + 0.0000000 15.818718542 0 1.074878e+01 327.1 1.841416 2.896527 0.8808190 2827 Predicted endonuclease containing a URI domain [DNA replication, recombination, and repair] L excinuclease ABC, C subunit 1.697726 2.659018 0.8304736 313 Predicted methyltransferases [General function prediction only] R uroporphyrin-III C-methyltransferase TRUE TRUE 27 TRUE 0.5353044 2.1567299 2.9019790 0.8514785 1.0724158 U 0.6519531 0.7963349 0.63131313 0.862002934 0.64617923 0.812615390 9.194067e-01 TRUE 0.5 9.194067e-01 TRUE 0.8750953389 0.7963349 0.52865752 0.5366334 288681 595 648989 648990 1 166 Same + + 63.2879694 101.173716540 0 2.138245e+02 327.1 1.489622 2.374823 0.8194327 143 Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J methionine--tRNA ligase (methionyl-tRNA synthetase) 1.803517 2.866687 0.8555471 84 Mg-dependent DNase [DNA replication, recombination, and repair] L TatD related DNase - TRUE TRUE 28 TRUE 3.9854235 3.7807496 3.7718552 0.8514785 1.0724158 N 0.9519411 0.9791982 28.21212121 0.353846274 0.97061041 0.275457624 9.476042e-01 TRUE 0.5 9.476042e-01 TRUE 0.7894741874 0.9791982 0.87257646 0.9330771 288681 595 648990 648991 1 214 Same + + 15.4444227 12.642159754 0 7.564803e+01 327.1 1.803517 2.866687 0.8555471 84 Mg-dependent DNase [DNA replication, recombination, and repair] L TatD related DNase 1.826936 2.864458 0.9208161 1658 Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair] L ribonuclease M5 L TRUE TRUE 29 TRUE 3.6923395 3.1796992 2.7656083 0.8514785 1.0724158 Y 2.5887034 0.9769449 30.98484848 0.189800668 0.96735174 0.139885959 8.740734e-01 TRUE 0.5 8.740734e-01 TRUE 0.6076041219 0.9769449 0.86859105 0.9262044 288681 595 648991 648992 1 -3 Same + + 18.8624587 35.152884912 0 1.089092e+02 327.1 1.826936 2.864458 0.9208161 1658 Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair] L ribonuclease M5 1.694457 2.719939 0.8744835 30 Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] J dimethyladenosine transferase - TRUE TRUE 30 TRUE 3.7720957 3.3972714 3.4501476 0.8514785 1.0724158 N 0.9519411 0.9742706 4.11111111 0.911770020 0.96346466 0.877665818 9.963439e-01 TRUE 0.5 9.963439e-01 TRUE 0.9849781125 0.9742706 0.86385332 0.9181376 288681 595 648992 648993 1 111 Same + + 9.6363125 4.712274432 0 3.779334e+00 NA 1.694457 2.719939 0.8744835 30 Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] J dimethyladenosine transferase 2.161590 3.451097 0.9422555 - - - conserved hypothetical protein; possible sporulation-specific protease TRUE TRUE 31 TRUE 3.4994831 1.6344925 2.2337630 0.8514785 0.6429928 U 0.6519531 0.9551265 23.21717172 0.460666264 0.93500325 0.372246271 9.247392e-01 TRUE 0.5 9.247392e-01 TRUE 0.8062441081 0.9551265 0.82969231 0.8630964 288681 595 648993 648994 1 239 Same + + 4.3469390 0.253587529 0 1.859346e+01 NA 2.161590 3.451097 0.9422555 - - - conserved hypothetical protein; possible sporulation-specific protease 1.770699 2.835839 1.0141923 4466 Uncharacterized protein conserved in bacteria [Function unknown] S veg protein TRUE TRUE 32 TRUE 3.1010382 2.4316224 0.8879200 0.8514785 0.6429928 U 0.6519531 0.8617839 32.11111111 0.129197619 0.77811765 0.093383618 3.422369e-01 FALSE 0.5 3.422369e-01 FALSE 0.2210732336 0.8617839 0.65670593 0.6487250 288681 595 648994 648995 1 459 Same + + 8.7342468 -55.885733512 0 2.856410e+01 NA 1.770699 2.835839 1.0141923 4466 Uncharacterized protein conserved in bacteria [Function unknown] S veg protein 1.836990 2.993386 0.9364456 1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism] I 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (CMK) TRUE TRUE 33 TRUE 3.4435935 2.6589383 0.3630907 0.8514785 0.6429928 U 0.6519531 0.8476013 37.78787879 0.015692801 0.75125632 0.010947162 4.593905e-02 FALSE 0.5 4.593905e-02 FALSE 0.0263679361 0.8476013 0.62944841 0.6222629 288681 595 648995 648996 1 55 Same + + 9.2106070 12.383268250 0 2.455196e+01 327.1 1.836990 2.993386 0.9364456 1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism] I 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (CMK) 1.882691 3.085883 0.9570585 503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism] F purine operon transcription repressor - TRUE TRUE 34 TRUE 3.4624769 2.5901324 2.7546261 0.8514785 1.0724158 N 0.9519411 0.9630861 16.94949495 0.620404770 0.94697416 0.531541821 9.668743e-01 TRUE 0.5 9.668743e-01 TRUE 0.8983632695 0.9630861 0.84394817 0.8854219 288681 595 648996 648997 1 123 Same + + 0.0000000 11.188990515 0 5.514630e+00 NA 1.882691 3.085883 0.9570585 503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism] F purine operon transcription repressor 1.385028 2.290475 0.8559760 251 Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis] J pur operon repressor - TRUE TRUE 35 TRUE 0.5353044 1.8423135 2.6807466 0.8514785 0.6429928 N 0.9519411 0.7858576 24.57070707 0.448048740 0.62301738 0.360432078 5.729305e-01 TRUE 0.5 5.729305e-01 TRUE 0.4555896212 0.7858576 0.50761112 0.5208349 288681 595 648997 648998 1 99 Same + + 0.0000000 3.037847884 0 1.912088e+00 NA 1.385028 2.290475 0.8559760 251 Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis] J pur operon repressor 1.586428 2.569131 0.9574926 2088 Uncharacterized protein, involved in the regulation of septum location [Cell envelope biogenesis, outer membrane] M stage V sporulation protein G - TRUE TRUE 36 TRUE 0.5353044 1.3780005 1.9806776 0.8514785 0.6429928 N 0.9519411 0.7396050 21.69696970 0.480961282 0.51292554 0.391473346 4.938808e-01 FALSE 0.5 4.938808e-01 FALSE 0.3944764794 0.7396050 0.41281456 0.4568997 288681 595 648998 648999 1 323 Same + + 3.3395038 -43.427315798 0 2.357626e+01 327.1 1.586428 2.569131 0.9574926 2088 Uncharacterized protein, involved in the regulation of septum location [Cell envelope biogenesis, outer membrane] M stage V sporulation protein G 1.579485 2.591806 0.9055475 1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] M UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase) M TRUE TRUE 37 TRUE 2.9665481 2.5688902 0.3717032 0.8514785 1.0724158 Y 2.5887034 0.8914212 35.28282828 0.042037302 0.83149039 0.029564144 1.779901e-01 FALSE 0.5 1.779901e-01 FALSE 0.0982219862 0.8914212 0.71281865 0.7086000 288681 595 648999 649000 1 19 Same + + 43.1206725 15.701674388 0 1.424939e+02 327.1 1.579485 2.591806 0.9055475 1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] M UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase) 1.399612 2.283664 0.8367334 462 Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism] FE ribose-phosphate diphosphokinase (ribose-phosphate pyrophosphokinase) (RPPK) (Phosphoribosyl pyrophosphate synthetase) - TRUE TRUE 38 TRUE 3.9587721 3.5862421 2.8929029 0.8514785 1.0724158 N 0.9519411 0.9678775 11.92424242 0.856531624 0.95408540 0.805627497 9.920037e-01 TRUE 0.5 9.920037e-01 TRUE 0.9718340435 0.9678775 0.85249363 0.8992396 288681 595 649000 649001 1 73 Same + + 110.8389495 -21.806828651 0 4.325857e+02 327.1 1.399612 2.283664 0.8367334 462 Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism] FE ribose-phosphate diphosphokinase (ribose-phosphate pyrophosphokinase) (RPPK) (Phosphoribosyl pyrophosphate synthetase) 1.594285 2.565472 0.8557212 193 Peptidyl-tRNA hydrolase [Translation, ribosomal structure and biogenesis] J aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V sporulation protein C - TRUE TRUE 39 TRUE 4.0031328 4.0388925 0.4157603 0.8514785 1.0724158 N 0.9519411 0.8761688 18.90909091 0.534380836 0.80447387 0.443445334 8.252363e-01 TRUE 0.5 8.252363e-01 TRUE 0.7130696542 0.8761688 0.68408282 0.6769725 288681 595 649001 649002 1 71 Same + + 0.0000000 4.544612685 0 4.544613e+00 NA 1.594285 2.565472 0.8557212 193 Peptidyl-tRNA hydrolase [Translation, ribosomal structure and biogenesis] J aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V sporulation protein C 2.002651 3.189093 0.8850798 - - - conserved hypothetical protein TRUE TRUE 40 TRUE 0.5353044 1.7233850 2.2066842 0.8514785 0.6429928 U 0.6519531 0.7280583 18.66666667 0.542018599 0.48325991 0.451042407 5.253498e-01 TRUE 0.5 5.253498e-01 TRUE 0.4293541882 0.7280583 0.38865764 0.4422703 288681 595 649002 649003 1 106 Same + + 0.0000000 4.544612685 0 4.208140e+00 NA 2.002651 3.189093 0.8850798 - - - conserved hypothetical protein 1.800876 2.845198 0.9029301 1197 Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] LK transcription-repair coupling factor TRUE TRUE 41 TRUE 0.5353044 1.6697175 2.2066842 0.8514785 0.6429928 U 0.6519531 0.7309526 22.60101010 0.470542134 0.49078406 0.381567649 4.613681e-01 FALSE 0.5 4.613681e-01 FALSE 0.3669245276 0.7309526 0.39473174 0.4458914 288681 595 649003 649004 1 137 Same + + 12.2985196 3.510532635 0 8.628038e+00 NA 1.800876 2.845198 0.9029301 1197 Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription] LK transcription-repair coupling factor 1.886770 3.053510 0.9477658 2002 Regulators of stationary/sporulation gene expression [Transcription] K stage V sporulation protein T K TRUE TRUE 42 TRUE 3.6055132 2.0508785 2.0501983 0.8514785 0.6429928 Y 2.5887034 0.9703237 25.98989899 0.420224623 0.95768882 0.334749107 9.425471e-01 TRUE 0.5 9.425471e-01 TRUE 0.8126748318 0.9703237 0.85684591 0.9064072 288681 595 649004 649005 1 231 Same + + 0.0000000 4.888635226 0 4.888635e+00 NA 1.886770 3.053510 0.9477658 2002 Regulators of stationary/sporulation gene expression [Transcription] K stage V sporulation protein T 2.034079 3.387597 1.0064980 2244 Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only] R integral membrane protein; stage V sporulation protein B TRUE TRUE 43 TRUE 0.5353044 1.7655486 2.2544715 0.8514785 0.6429928 U 0.6519531 0.7309449 31.79797980 0.144258199 0.49076394 0.104771658 1.397567e-01 FALSE 0.5 1.397567e-01 FALSE 0.0990435279 0.7309449 0.39471545 0.4458817 288681 595 649005 649006 1 13 Same + + 0.0000000 6.459387378 0 6.459387e+00 327.1 2.034079 3.387597 1.0064980 2244 Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only] R integral membrane protein; stage V sporulation protein B 1.860218 2.918269 0.9094965 3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only] R tetrapyrrole (corrin/porphyrin) methylases and MazG nucleotide pyrophosphohydrolase domain fusion protein TRUE TRUE 44 TRUE 0.5353044 1.9369097 2.4364303 0.8514785 1.0724158 U 0.6519531 0.7629364 9.23232323 0.901297905 0.57012808 0.863750725 9.237274e-01 TRUE 0.5 9.237274e-01 TRUE 0.8865023375 0.7629364 0.46102221 0.4880272 288681 595 649006 649007 1 15 Same + + 11.0855061 5.810691960 0 2.973239e+01 327.1 1.860218 2.918269 0.9094965 3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only] R tetrapyrrole (corrin/porphyrin) methylases and MazG nucleotide pyrophosphohydrolase domain fusion protein 1.800635 2.831216 0.9199672 1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] J S4 domain protein; probable heat shock protein 15 TRUE TRUE 45 TRUE 3.5588317 2.6785336 2.3798153 0.8514785 1.0724158 U 0.6519531 0.9530232 10.24242424 0.888318768 0.93180656 0.846674136 9.908830e-01 TRUE 0.5 9.908830e-01 TRUE 0.9741841984 0.9530232 0.82591262 0.8573239 288681 595 649007 649008 1 41 Same + + 14.8926104 4.239939808 0 2.351872e+01 NA 1.800635 2.831216 0.9199672 1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis] J S4 domain protein; probable heat shock protein 15 1.778993 2.848879 0.8640338 - - - conserved hypothetical protein TRUE TRUE 46 TRUE 3.6746739 2.5646559 2.1523523 0.8514785 0.6429928 U 0.6519531 0.9468207 15.63131313 0.708795556 0.92229711 0.628225101 9.665447e-01 TRUE 0.5 9.665447e-01 TRUE 0.9145595257 0.9468207 0.81473582 0.8405994 288681 595 649008 649009 1 -3 Same + + 1.6582281 5.483413644 0 7.141642e+00 NA 1.778993 2.848879 0.8640338 - - - conserved hypothetical protein 2.461973 3.950769 1.0272201 - - - probable membrane protein TRUE TRUE 47 TRUE 2.6115021 1.9821845 2.3280931 0.8514785 0.6429928 U 0.6519531 0.9172259 4.11111111 0.911770020 0.87515225 0.877665818 9.863832e-01 TRUE 0.5 9.863832e-01 TRUE 0.9704682256 0.9172259 0.76076368 0.7664713 288681 595 649009 649010 1 -3 Same + + 0.0000000 5.483413644 0 5.483414e+00 NA 2.461973 3.950769 1.0272201 - - - probable membrane protein 2.226263 3.466159 0.9721702 2919 Septum formation initiator [Cell division and chromosome partitioning] D cell division protein DIVIC TRUE TRUE 48 TRUE 0.5353044 1.8388975 2.3280931 0.8514785 0.6429928 U 0.6519531 0.7349073 4.11111111 0.911770020 0.50096885 0.877665818 9.120813e-01 TRUE 0.5 9.120813e-01 TRUE 0.8746270694 0.7349073 0.40301069 0.4508885 288681 595 649010 649011 1 88 Same + + 0.0000000 17.721850494 0 1.772185e+01 327.1 2.226263 3.466159 0.9721702 2919 Septum formation initiator [Cell division and chromosome partitioning] D cell division protein DIVIC 1.575174 2.471616 0.9175692 1098 Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] J S1-type RNA-binding domain protein - TRUE TRUE 49 TRUE 0.5353044 2.4051765 2.9960749 0.8514785 1.0724158 N 0.9519411 0.8077639 20.51515152 0.490294007 0.67075960 0.400409195 6.621284e-01 TRUE 0.5 6.621284e-01 TRUE 0.5418173123 0.8077639 0.55143979 0.5544825 288681 595 649011 649014 1 672 Same + + 6.3739759 -45.500972922 0 5.972307e+00 327.1 1.575174 2.471616 0.9175692 1098 Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] J S1-type RNA-binding domain protein 1.981234 3.212302 0.9593574 2208 Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] TK serine/threonine specific protein phosphatase; stage II sporulation protein E - TRUE TRUE 50 TRUE 3.2804452 1.8888121 0.3696625 0.8514785 1.0724158 N 0.9519411 0.8832037 39.38383838 0.008232015 0.81705068 0.005729449 3.574427e-02 FALSE 0.5 3.574427e-02 FALSE 0.0187683731 0.8832037 0.69737377 0.6913371 288681 595 649014 649015 1 234 Same + + 9.5854704 -2.867432750 0 1.423244e+01 327.1 1.981234 3.212302 0.9593574 2208 Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] TK serine/threonine specific protein phosphatase; stage II sporulation protein E 2.188265 3.465990 0.9631337 37 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control [Cell division and chromosome partitioning] D cell cycle protein - TRUE TRUE 51 TRUE 3.4949136 2.2738478 0.4925761 0.8514785 1.0724158 N 0.9519411 0.8940059 31.93434343 0.137492375 0.83597739 0.099642143 4.482662e-01 FALSE 0.5 4.482662e-01 FALSE 0.2883529081 0.8940059 0.71765891 0.7141412 288681 595 649015 649016 1 -3 Same + + 27.7651483 24.697500079 0 1.295134e+02 327.1 2.188265 3.465990 0.9631337 37 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control [Cell division and chromosome partitioning] D cell cycle protein 1.550255 2.514811 0.9424144 634 Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism] F hypoxanthine phosphoribosyltransferase (hypoxanthine-guanine phosphoribosyltransferase) - TRUE TRUE 52 TRUE 3.8792582 3.5182874 3.2044412 0.8514785 1.0724158 N 0.9519411 0.9718061 4.11111111 0.911770020 0.95986364 0.877665818 9.959700e-01 TRUE 0.5 9.959700e-01 TRUE 0.9844254219 0.9718061 0.85947994 0.9107888 288681 595 649016 649017 1 86 Same + + 33.8211514 21.641156134 0 1.434595e+02 327.1 1.550255 2.514811 0.9424144 634 Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism] F hypoxanthine phosphoribosyltransferase (hypoxanthine-guanine phosphoribosyltransferase) 1.597195 2.559261 0.8892934 465 ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] O cell division protein - TRUE TRUE 53 TRUE 3.9223195 3.5967593 3.1324423 0.8514785 1.0724158 N 0.9519411 0.9709357 20.35353535 0.493576367 0.95858753 0.403566248 9.575554e-01 TRUE 0.5 9.575554e-01 TRUE 0.8547729039 0.9709357 0.85793371 0.9082127 288681 595 649017 649018 1 225 Same + + 11.1355669 3.735243457 0 -7.384443e+00 327.1 1.597195 2.559261 0.8892934 465 ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] O cell division protein 1.713527 2.768980 0.9068174 1521 Putative transcriptional regulator, homolog of Bvg accessory factor [Transcription] K transcriptional activator, homolog of Bvg accessory factor - TRUE TRUE 54 TRUE 3.5617206 0.5393268 2.0909760 0.8514785 1.0724158 N 0.9519411 0.9714456 31.54040404 0.157834979 0.95933531 0.115132171 8.155455e-01 TRUE 0.5 8.155455e-01 TRUE 0.5327677088 0.9714456 0.85883955 0.9097205 288681 595 649018 649019 1 7 Same + + 0.0000000 9.827994862 0 3.247792e+00 327.1 1.713527 2.768980 0.9068174 1521 Putative transcriptional regulator, homolog of Bvg accessory factor [Transcription] K transcriptional activator, homolog of Bvg accessory factor 1.665693 2.682683 0.9135134 1281 Disulfide bond chaperones of the HSP33 family [Posttranslational modification, protein turnover, chaperones] O 33 kDa chaperonin (HSP33) - TRUE TRUE 55 TRUE 0.5353044 1.5653442 2.6273217 0.8514785 1.0724158 N 0.9519411 0.8120332 7.98989899 0.912754056 0.67976422 0.878979733 9.569102e-01 TRUE 0.5 9.569102e-01 TRUE 0.9301181930 0.8120332 0.55990363 0.5613221 288681 595 649019 649020 1 105 Same + + 0.0000000 -0.050721799 0 -1.296332e+01 327.1 1.665693 2.682683 0.9135134 1281 Disulfide bond chaperones of the HSP33 family [Posttranslational modification, protein turnover, chaperones] O 33 kDa chaperonin (HSP33) 1.615494 2.610248 0.9198964 31 Cysteine synthase [Amino acid transport and metabolism] E cysteine synthase (cysteine synthase A) (O-acetylserine sulfhydrylase) - TRUE TRUE 56 TRUE 0.5353044 0.5539230 0.5370779 0.8514785 1.0724158 N 0.9519411 0.6446953 22.47979798 0.473011971 0.23755422 0.383909101 2.185404e-01 FALSE 0.5 2.185404e-01 FALSE 0.1908732185 0.6446953 0.20812098 0.3495667 288681 595 649020 649021 1 221 Same + + 0.0000000 -4.546656978 0 -1.407683e+01 327.1 1.615494 2.610248 0.9198964 31 Cysteine synthase [Amino acid transport and metabolism] E cysteine synthase (cysteine synthase A) (O-acetylserine sulfhydrylase) 1.906926 3.015943 0.9265183 147 Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism] EH anthranilate synthase, component I (para-aminobenzoate synthase) E TRUE TRUE 57 TRUE 0.5353044 0.5560353 0.4684940 0.8514785 1.0724158 Y 2.5887034 0.7388628 31.36868687 0.167391678 0.51104672 0.122479305 1.736419e-01 FALSE 0.5 1.736419e-01 FALSE 0.1231477986 0.7388628 0.41126792 0.4559446 288681 595 649021 649022 1 6 Same + + 56.5869598 33.705578003 0 2.089313e+02 2.0 1.906926 3.015943 0.9265183 147 Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism] EH anthranilate synthase, component I (para-aminobenzoate synthase) 2.078722 3.353928 0.9249583 512 Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] EH anthranilate synthase, component II (para-aminobenzoate synthase glutamine amidotransferase, component II ) EH TRUE TRUE 58 TRUE 3.9785963 3.7726508 3.4111880 0.8514785 3.9758328 Y 2.5887034 0.9927762 7.79292929 0.913984932 0.98993348 0.880624784 9.990439e-01 TRUE 0.5 9.990439e-01 TRUE 0.9892481057 0.9927762 0.89646705 0.9760225 288681 595 649022 649023 1 -6 Same + + 3.5189804 5.738616248 0 5.259385e+00 327.1 2.078722 3.353928 0.9249583 512 Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] EH anthranilate synthase, component II (para-aminobenzoate synthase glutamine amidotransferase, component II ) 1.993424 3.207700 0.9036357 115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] EH 4-amino-4-deoxychorismate lyase EH TRUE TRUE 59 TRUE 3.0016811 1.8091715 2.3690094 0.8514785 1.0724158 Y 2.5887034 0.9686331 3.02020202 0.902664866 0.95520029 0.865560125 9.949681e-01 TRUE 0.5 9.949681e-01 TRUE 0.9818758977 0.9686331 0.85383863 0.9014451 288681 595 649023 649024 1 -7 Same + + 1.3217558 5.738616248 0 5.259385e+00 327.1 1.993424 3.207700 0.9036357 115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] EH 4-amino-4-deoxychorismate lyase 1.781314 2.875023 0.8952157 294 Dihydropteroate synthase and related enzymes [Coenzyme metabolism] H dihydropteroate synthase (DHPS) (dihydropteroate pyrophosphorylase) H TRUE TRUE 60 TRUE 2.5186784 1.8091715 2.3690094 0.8514785 1.0724158 Y 2.5887034 0.9568384 2.65151515 0.898487914 0.93759476 0.860037783 9.925362e-01 TRUE 0.5 9.925362e-01 TRUE 0.9778145976 0.9568384 0.83276482 0.8678335 288681 595 649024 649025 1 1 Same + + 28.9260339 75.598166033 0 2.105121e+02 327.1 1.781314 2.875023 0.8952157 294 Dihydropteroate synthase and related enzymes [Coenzyme metabolism] H dihydropteroate synthase (DHPS) (dihydropteroate pyrophosphorylase) 1.984624 3.122828 0.9327214 1539 Dihydroneopterin aldolase [Coenzyme metabolism] H dihydroneopterin aldolase H TRUE TRUE 61 TRUE 3.8921975 3.7753494 3.6955552 0.8514785 1.0724158 Y 2.5887034 0.9856537 6.03030303 0.917998071 0.97986380 0.886000246 9.981677e-01 TRUE 0.5 9.981677e-01 TRUE 0.9884098923 0.9856537 0.88396166 0.9531610 288681 595 649025 649026 1 -3 Same + + 30.7380094 85.792526604 0 1.806778e+02 327.1 1.984624 3.122828 0.9327214 1539 Dihydroneopterin aldolase [Coenzyme metabolism] H dihydroneopterin aldolase 2.037342 3.229208 0.8900873 801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism] H 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase (7,8-dihydro-6-hydroxymethylpterin) H TRUE TRUE 62 TRUE 3.9081773 3.7055081 3.7428185 0.8514785 1.0724158 Y 2.5887034 0.9864233 4.11111111 0.911770020 0.98095889 0.877665818 9.981252e-01 TRUE 0.5 9.981252e-01 TRUE 0.9876198414 0.9864233 0.88531576 0.9555952 288681 595 649026 649027 1 -48 Same + + 0.0000000 4.346079749 0 3.957362e+00 327.1 2.037342 3.229208 0.8900873 801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism] H 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase (7,8-dihydro-6-hydroxymethylpterin) 2.115947 3.373311 1.0515791 1476 Predicted transcriptional regulators [Transcription] K probable transcriptional regulator - TRUE TRUE 63 TRUE 0.5353044 1.6488497 2.1724934 0.8514785 1.0724158 N 0.9519411 0.7670171 0.28282828 0.852704560 0.57977541 0.800758412 8.887291e-01 TRUE 0.5 8.887291e-01 TRUE 0.8366221589 0.7670171 0.46937195 0.4936998 288681 595 649027 649028 1 24 Same + + 0.0000000 3.561960790 0 3.055461e+00 327.1 2.115947 3.373311 1.0515791 1476 Predicted transcriptional regulators [Transcription] K probable transcriptional regulator 1.620663 2.599164 0.8743953 42 tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] J possible TIM-barrel protein, NifR3 family - TRUE TRUE 64 TRUE 0.5353044 1.5390848 2.0572476 0.8514785 1.0724158 N 0.9519411 0.7610554 13.30808081 0.816830958 0.56564646 0.755855719 8.531011e-01 TRUE 0.5 8.531011e-01 TRUE 0.7897241011 0.7610554 0.45716537 0.4854362 288681 595 649028 649029 1 160 Same + + 19.1842569 19.485385980 0 1.279001e+00 327.1 1.620663 2.599164 0.8743953 42 tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] J possible TIM-barrel protein, NifR3 family 1.430776 2.257822 0.8070860 1190 Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] J lysine--tRNA ligase (lysyl-tRNA synthetase) J TRUE TRUE 65 TRUE 3.7818757 1.2596183 3.0497001 0.8514785 1.0724158 Y 2.5887034 0.9888844 27.78282828 0.376274273 0.98444936 0.295186894 9.744837e-01 TRUE 0.5 9.744837e-01 TRUE 0.8294437754 0.9888844 0.88964133 0.9634375 288681 595 649029 595281 1 399 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.430776 2.257822 0.8070860 1190 Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] J lysine--tRNA ligase (lysyl-tRNA synthetase) NA NA NA TRUE TRUE 66 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 36.97474747 0.021787590 0.10149799 0.015227347 2.509707e-03 FALSE 0.5 2.509707e-03 FALSE 0.0030585030 0.6062567 0.12106533 0.3132127 288681 595 595281 595282 1 183 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 67 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 29.38888889 0.283752548 0.10149799 0.215708174 4.283529e-02 FALSE 0.5 4.283529e-02 FALSE 0.0517446203 0.6062567 0.12106533 0.3132127 288681 595 595282 595283 1 48 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 68 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 16.27777778 0.666905445 0.10149799 0.581586687 1.844524e-01 FALSE 0.5 1.844524e-01 FALSE 0.2161646928 0.6062567 0.12106533 0.3132127 288681 595 595283 649033 1 204 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 1.995449 3.192024 0.9736551 4463 Transcriptional repressor of class III stress genes [Transcription] K transcriptional regulator TRUE TRUE 69 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 30.43939394 0.222288436 0.10149799 0.165575983 3.127778e-02 FALSE 0.5 3.127778e-02 FALSE 0.0378783884 0.6062567 0.12106533 0.3132127 288681 595 649033 649034 1 160 Same + + 15.8135782 25.860573004 0 5.549472e+01 NA 1.995449 3.192024 0.9736551 4463 Transcriptional repressor of class III stress genes [Transcription] K transcriptional regulator 1.859708 2.884836 0.8920501 3880 Uncharacterized protein with conserved CXXC pairs [Function unknown] S nucleotide excision repair protein, with UvrB/UvrC motif TRUE TRUE 70 TRUE 3.6997832 3.0347339 3.2323008 0.8514785 0.6429928 U 0.6519531 0.9664050 27.78282828 0.376274273 0.95190746 0.295186894 9.227241e-01 TRUE 0.5 9.227241e-01 TRUE 0.7735019442 0.9664050 0.84987031 0.8949621 288681 595 649034 649035 1 5 Same + + 29.6305691 25.860573004 0 7.794793e+01 327.1 1.859708 2.884836 0.8920501 3880 Uncharacterized protein with conserved CXXC pairs [Function unknown] S nucleotide excision repair protein, with UvrB/UvrC motif 2.074617 3.300051 0.9447962 3869 Arginine kinase [Amino acid transport and metabolism] E ATP: guanido phosphotransferase family; probable arginine kinase TRUE TRUE 71 TRUE 3.8953296 3.2018080 3.2323008 0.8514785 1.0724158 U 0.6519531 0.9724660 7.53535354 0.915321646 0.96082961 0.882413231 9.962427e-01 TRUE 0.5 9.962427e-01 TRUE 0.9852423803 0.9724660 0.86065161 0.9127485 288681 595 649035 649036 1 23 Same + + 20.6359003 25.351854231 0 5.439620e+01 327.1 2.074617 3.300051 0.9447962 3869 Arginine kinase [Amino acid transport and metabolism] E ATP: guanido phosphotransferase family; probable arginine kinase 1.565658 2.491951 0.8635043 542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] O negative regulator of genetic competence clpC/mecB (ATP-dependent Clp protease) - TRUE TRUE 72 TRUE 3.7998381 3.0275982 3.2238067 0.8514785 1.0724158 N 0.9519411 0.9741753 13.06565657 0.825832682 0.96332576 0.766999256 9.920349e-01 TRUE 0.5 9.920349e-01 TRUE 0.9677860047 0.9741753 0.86368435 0.9178519 288681 595 649036 649037 1 97 Same + + 34.2275578 0.969688612 0 3.710294e+01 327.1 1.565658 2.491951 0.8635043 542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] O negative regulator of genetic competence clpC/mecB (ATP-dependent Clp protease) 1.863539 3.033376 0.9647214 1066 Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] O DNA repair protein O TRUE TRUE 73 TRUE 3.9256887 2.8118806 1.6013539 0.8514785 1.0724158 Y 2.5887034 0.9667553 21.51010101 0.481770744 0.95242620 0.392246018 9.490096e-01 TRUE 0.5 9.490096e-01 TRUE 0.8409798041 0.9667553 0.85049463 0.8959772 288681 595 649037 649038 1 4 Same + + 25.2485577 6.024556918 0 1.094963e+02 327.1 1.863539 3.033376 0.9647214 1066 Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] O DNA repair protein 2.058022 3.292477 0.9794421 1623 Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] R DNA-binding protein TRUE TRUE 74 TRUE 3.8550548 3.3998213 2.3916467 0.8514785 1.0724158 U 0.6519531 0.9535848 7.19191919 0.916595219 0.93266144 0.884119091 9.934731e-01 TRUE 0.5 9.934731e-01 TRUE 0.9813105608 0.9535848 0.82692229 0.8588600 288681 595 649038 649039 1 162 Same + + 12.8837051 4.285123268 0 1.506886e+01 NA 2.058022 3.292477 0.9794421 1623 Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] R DNA-binding protein 1.760784 2.835114 0.9066459 4956 Integral membrane protein (PIN domain superfamily) [General function prediction only] R conserved hypothetical protein; possible PIN domain protein TRUE TRUE 75 TRUE 3.6178746 2.3111568 2.1633210 0.8514785 0.6429928 U 0.6519531 0.9486196 27.94444444 0.368161766 0.92506785 0.288015355 8.779515e-01 TRUE 0.5 8.779515e-01 TRUE 0.7236469173 0.9486196 0.81798207 0.8454046 288681 595 649039 649040 1 17 Same + + 23.6960934 5.590570913 0 3.240434e+01 NA 1.760784 2.835114 0.9066459 4956 Integral membrane protein (PIN domain superfamily) [General function prediction only] R conserved hypothetical protein; possible PIN domain protein 1.897626 3.022277 0.9160467 1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] I 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (MEP cytidylyltransferase) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MCT) TRUE TRUE 76 TRUE 3.8403492 2.7290960 2.3426440 0.8514785 0.6429928 U 0.6519531 0.9548829 11.26767677 0.870780400 0.93463373 0.823892429 9.897282e-01 TRUE 0.5 9.897282e-01 TRUE 0.9703510654 0.9548829 0.82925482 0.8624252 288681 595 649040 649041 1 115 Same + + 90.1789369 304.027734223 0 6.003564e+02 3.0 1.897626 3.022277 0.9160467 1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] I 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (MEP cytidylyltransferase) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MCT) 1.672467 2.663409 0.8898493 245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Lipid metabolism] I 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) I TRUE TRUE 77 TRUE 3.9995896 4.1512237 4.1014729 0.8514785 3.7764280 Y 2.5887034 0.9942777 23.62121212 0.456926602 0.99203790 0.368733657 9.905509e-01 TRUE 0.5 9.905509e-01 TRUE 0.8823108378 0.9942777 0.89909591 0.9809395 288681 595 649041 649042 1 90 Same + + 15.0731118 -2.502922257 0 -1.839336e+01 327.1 1.672467 2.663409 0.8898493 245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Lipid metabolism] I 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECDP-synthase) 1.384363 2.177861 0.7668714 8 Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] J glutamate--tRNA ligase (glutamyl-tRNA synthetase) - TRUE TRUE 78 TRUE 3.6810306 0.5615570 0.4978782 0.8514785 1.0724158 N 0.9519411 0.9388275 20.76262626 0.486666272 0.90985679 0.396928612 9.053846e-01 TRUE 0.5 9.053846e-01 TRUE 0.7915998385 0.9388275 0.80026373 0.8196809 288681 595 649042 649043 1 433 Same + + 11.7222152 -63.561311299 0 2.255504e+01 236.0 1.384363 2.177861 0.7668714 8 Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] J glutamate--tRNA ligase (glutamyl-tRNA synthetase) 1.834708 2.955270 0.9135072 1045 Serine acetyltransferase [Amino acid transport and metabolism] E serine O-acetyltransferase - TRUE TRUE 79 TRUE 3.5901876 2.5372477 0.3615576 0.8514785 1.3532782 N 0.9519411 0.8938165 37.39898990 0.018368397 0.83564948 0.012824176 8.687705e-02 FALSE 0.5 8.687705e-02 FALSE 0.0453275068 0.8938165 0.71730452 0.7137333 288681 595 649043 649044 1 -19 Same + + 39.4760148 19.922979345 0 1.186297e+02 327.1 1.834708 2.955270 0.9135072 1045 Serine acetyltransferase [Amino acid transport and metabolism] E serine O-acetyltransferase 1.588637 2.526320 0.8360078 215 Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J cysteine--tRNA ligase (cysteinyl-tRNA synthetase) - TRUE TRUE 80 TRUE 3.9518636 3.4536211 3.0637874 0.8514785 1.0724158 N 0.9519411 0.9715453 1.25252525 0.876125243 0.95948148 0.830799832 9.940646e-01 TRUE 0.5 9.940646e-01 TRUE 0.9773211995 0.9715453 0.85901668 0.9100158 288681 595 649044 649045 1 3 Same + + 31.8576014 34.787008502 0 1.331986e+02 327.1 1.588637 2.526320 0.8360078 215 Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J cysteine--tRNA ligase (cysteinyl-tRNA synthetase) 1.838571 3.005616 0.9265464 1939 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein TRUE TRUE 81 TRUE 3.9118121 3.5391210 3.4337795 0.8514785 1.0724158 U 0.6519531 0.9732418 6.79797980 0.917490510 0.96196373 0.885319373 9.964568e-01 TRUE 0.5 9.964568e-01 TRUE 0.9858106306 0.9732418 0.86202863 0.9150602 288681 595 649045 649046 1 -3 Same + + 34.7502077 34.529179393 0 9.032994e+01 16.0 1.838571 3.005616 0.9265464 1939 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein 1.600440 2.590245 0.8595050 566 rRNA methylases [Translation, ribosomal structure and biogenesis] J tRNA/rRNA SpoU-like methyltransferase; probable TrmH family TRUE TRUE 82 TRUE 3.9276780 3.2711860 3.4287519 0.8514785 2.8971664 U 0.6519531 0.9847974 4.11111111 0.911770020 0.97864334 0.877665818 9.978927e-01 TRUE 0.5 9.978927e-01 TRUE 0.9872742455 0.9847974 0.88245422 0.9504627 288681 595 649046 649047 1 4 Same + + 20.5826688 27.348500149 0 1.103442e+02 NA 1.600440 2.590245 0.8595050 566 rRNA methylases [Translation, ribosomal structure and biogenesis] J tRNA/rRNA SpoU-like methyltransferase; probable TrmH family 2.255455 3.485270 0.9700402 3688 Predicted RNA-binding protein containing a PIN domain [General function prediction only] R conserved hypothetical protein TRUE TRUE 83 TRUE 3.7988001 3.4049245 3.2505471 0.8514785 0.6429928 U 0.6519531 0.9656422 7.19191919 0.916595219 0.95077653 0.884119091 9.953112e-01 TRUE 0.5 9.953112e-01 TRUE 0.9840139640 0.9656422 0.84851025 0.8927569 288681 595 649047 649048 1 68 Same + + 14.4936239 9.598726516 0 3.952668e+01 NA 2.255455 3.485270 0.9700402 3688 Predicted RNA-binding protein containing a PIN domain [General function prediction only] R conserved hypothetical protein 2.220195 3.543728 0.9575703 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K RNA polymerase sigma-30 factor TRUE TRUE 84 TRUE 3.6656867 2.8436627 2.6125007 0.8514785 0.6429928 U 0.6519531 0.9547324 18.31313131 0.554058381 0.93440533 0.463104797 9.465207e-01 TRUE 0.5 9.465207e-01 TRUE 0.8576038223 0.9547324 0.82898447 0.8620108 288681 595 649048 649049 1 311 Same + + 6.2417733 -24.628007054 0 1.241324e+01 327.1 2.220195 3.543728 0.9575703 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K RNA polymerase sigma-30 factor 1.693792 2.823534 1.0609662 690 Preprotein translocase subunit SecE [Intracellular trafficking and secretion] U preprotein translocase secE subunit - TRUE TRUE 85 TRUE 3.2647083 2.2061568 0.4109796 0.8514785 1.0724158 N 0.9519411 0.8752506 34.98484848 0.046981127 0.80281736 0.033091727 1.671598e-01 FALSE 0.5 1.671598e-01 FALSE 0.0957533054 0.8752506 0.68234330 0.6751248 288681 595 649049 649050 1 132 Same + + 68.2275975 176.076410570 0 3.081729e+02 327.1 1.693792 2.823534 1.0609662 690 Preprotein translocase subunit SecE [Intracellular trafficking and secretion] U preprotein translocase secE subunit 1.545220 2.471738 0.9157414 250 Transcription antiterminator [Transcription] K transcription antitermination factor - TRUE TRUE 86 TRUE 3.9885887 3.9032825 3.9457692 0.8514785 1.0724158 N 0.9519411 0.9804599 25.50000000 0.428245759 0.97242852 0.342101410 9.635261e-01 TRUE 0.5 9.635261e-01 TRUE 0.8395819059 0.9804599 0.87480545 0.9369561 288681 595 649050 649051 1 189 Same + + 218.2977876 430.232583377 0 1.101966e+03 327.1 1.545220 2.471738 0.9157414 250 Transcription antiterminator [Transcription] K transcription antitermination factor 1.480753 2.409631 0.8966451 80 Ribosomal protein L11 [Translation, ribosomal structure and biogenesis] J ribosomal protein L11 (50S ribosomal protein L11) - TRUE TRUE 87 TRUE 3.9946434 4.3338713 4.1817997 0.8514785 1.0724158 N 0.9519411 0.9807573 29.68686869 0.265726361 0.97285640 0.200792869 9.284208e-01 TRUE 0.5 9.284208e-01 TRUE 0.7175865478 0.9807573 0.87533059 0.9378737 288681 595 649051 649052 1 178 Same + + 277.1427712 504.146614218 0 1.422478e+03 56.0 1.480753 2.409631 0.8966451 80 Ribosomal protein L11 [Translation, ribosomal structure and biogenesis] J ribosomal protein L11 (50S ribosomal protein L11) 1.324483 2.151562 0.7439143 81 Ribosomal protein L1 [Translation, ribosomal structure and biogenesis] J ribosomal protein L1 (50S ribosomal protein L1) J TRUE TRUE 88 TRUE 3.9868685 4.4235823 4.2712816 0.8514785 2.2414829 Y 2.5887034 0.9914254 29.05050505 0.304441309 0.98803485 0.233049990 9.730770e-01 TRUE 0.5 9.730770e-01 TRUE 0.7870247610 0.9914254 0.89409986 0.9716285 288681 595 649052 649053 1 233 Same + + 227.0726831 220.614116308 0 1.038353e+03 56.0 1.324483 2.151562 0.7439143 81 Ribosomal protein L1 [Translation, ribosomal structure and biogenesis] J ribosomal protein L1 (50S ribosomal protein L1) 1.441730 2.341144 0.8586862 244 Ribosomal protein L10 [Translation, ribosomal structure and biogenesis] J ribosomal protein L10 (50S ribosomal protein L10) J TRUE TRUE 89 TRUE 3.9941524 4.3165999 4.0164288 0.8514785 2.2414829 Y 2.5887034 0.9904829 31.87878788 0.140211382 0.98670709 0.101700896 9.236924e-01 TRUE 0.5 9.236924e-01 TRUE 0.5750408216 0.9904829 0.89244700 0.9685791 288681 595 649053 649054 1 68 Same + + 272.2378698 567.789620564 0 1.390898e+03 42.0 1.441730 2.341144 0.8586862 244 Ribosomal protein L10 [Translation, ribosomal structure and biogenesis] J ribosomal protein L10 (50S ribosomal protein L10) 1.416483 2.254577 0.7269140 222 Ribosomal protein L7/L12 [Translation, ribosomal structure and biogenesis] J ribosomal protein L7/L12 (50S ribosomal protein L7/L12) J TRUE TRUE 90 TRUE 3.9878554 4.4148661 4.3502915 0.8514785 2.3391829 Y 2.5887034 0.9920230 18.31313131 0.554058381 0.98887546 0.463104797 9.910268e-01 TRUE 0.5 9.910268e-01 TRUE 0.9138451375 0.9920230 0.89514739 0.9735691 288681 595 649054 649055 1 77 Same + + 3.4946118 9.376328192 0 1.032225e+01 327.1 1.416483 2.254577 0.7269140 222 Ribosomal protein L7/L12 [Translation, ribosomal structure and biogenesis] J ribosomal protein L7/L12 (50S ribosomal protein L7/L12) 1.905419 3.072789 0.9286608 2813 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] J conserved hypothetical protein; possible methyltransferase J TRUE TRUE 91 TRUE 2.9958510 2.1266720 2.6061673 0.8514785 1.0724158 Y 2.5887034 0.9697969 19.35858586 0.521147487 0.95691429 0.430382404 9.602721e-01 TRUE 0.5 9.602721e-01 TRUE 0.8660366217 0.9697969 0.85590916 0.9048570 288681 595 649055 649056 1 294 Same + + 2.3978953 -5.533358721 0 7.212352e+00 327.1 1.905419 3.072789 0.9286608 2813 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] J conserved hypothetical protein; possible methyltransferase 1.583127 2.545150 0.9097308 85 DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription] K DNA-directed RNA polymerase, beta subunit - TRUE TRUE 92 TRUE 2.8001154 1.9875541 0.4611002 0.8514785 1.0724158 N 0.9519411 0.8476857 34.27272727 0.061245128 0.75141875 0.043330481 1.647259e-01 FALSE 0.5 1.647259e-01 FALSE 0.0998295122 0.8476857 0.62961133 0.6224164 288681 595 649056 649057 1 38 Same + + 58.9221243 62.958957768 0 2.507619e+02 6.0 1.583127 2.545150 0.9097308 85 DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription] K DNA-directed RNA polymerase, beta subunit 1.521792 2.436703 0.8644330 86 DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] K DNA-directed RNA polymerase, beta' subunit K TRUE TRUE 93 TRUE 3.9804956 3.8513078 3.6720414 0.8514785 3.4506408 Y 2.5887034 0.9926303 15.32323232 0.725410417 0.98972866 0.647148490 9.960870e-01 TRUE 0.5 9.960870e-01 TRUE 0.9580041388 0.9926303 0.89621148 0.9755466 288681 595 649057 649058 1 81 Same + + 16.5348443 11.816434156 0 2.462710e+01 NA 1.521792 2.436703 0.8644330 86 DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] K DNA-directed RNA polymerase, beta' subunit 2.561394 4.215107 0.9804985 1358 Ribosomal protein HS6-type (S12/L30/L7a) [Translation, ribosomal structure and biogenesis] J ribosomal protein, L7Ae family (50S ribosomal protein) - TRUE TRUE 94 TRUE 3.7180540 2.5943950 2.7218598 0.8514785 0.6429928 N 0.9519411 0.9644686 19.91414141 0.505572547 0.94903325 0.415168221 9.501007e-01 TRUE 0.5 9.501007e-01 TRUE 0.8492920363 0.9644686 0.84641661 0.8893790 288681 595 649058 649059 1 115 Same + + 16.0240186 14.920824449 0 3.018716e+01 NA 2.561394 4.215107 0.9804985 1358 Ribosomal protein HS6-type (S12/L30/L7a) [Translation, ribosomal structure and biogenesis] J ribosomal protein, L7Ae family (50S ribosomal protein) 1.438056 2.310839 0.8484590 48 Ribosomal protein S12 [Translation, ribosomal structure and biogenesis] J ribosomal protein S12 (30S ribosomal protein S12) J TRUE TRUE 95 TRUE 3.7059274 2.6850892 2.8590333 0.8514785 0.6429928 Y 2.5887034 0.9786578 23.62121212 0.456926602 0.96983029 0.368733657 9.643450e-01 TRUE 0.5 9.643450e-01 TRUE 0.8510231175 0.9786578 0.87162122 0.9314225 288681 595 649059 649060 1 30 Same + + 265.1488780 534.040394301 0 1.373012e+03 8.0 1.438056 2.310839 0.8484590 48 Ribosomal protein S12 [Translation, ribosomal structure and biogenesis] J ribosomal protein S12 (30S ribosomal protein S12) 1.402793 2.243639 0.8523640 49 Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] J ribosomal protein S7 (30S ribosomal protein S7) J TRUE TRUE 96 TRUE 3.9891231 4.4119624 4.3163495 0.8514785 3.2925793 Y 2.5887034 0.9937277 14.34848485 0.770031155 0.99126783 0.699213529 9.973761e-01 TRUE 0.5 9.973761e-01 TRUE 0.9672369046 0.9937277 0.89813332 0.9791345 288681 595 649060 649061 1 208 Same + + 242.3662621 469.862487770 0 1.204902e+03 327.1 1.402793 2.243639 0.8523640 49 Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] J ribosomal protein S7 (30S ribosomal protein S7) 1.426345 2.303964 0.7618180 480 Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] J protein-synthesizing GTPase (translation elongation factor G (EF-G)) J TRUE TRUE 97 TRUE 3.9923275 4.3627238 4.2320253 0.8514785 1.0724158 Y 2.5887034 0.9882441 30.66161616 0.209157703 0.98354294 0.155127074 9.404978e-01 TRUE 0.5 9.404978e-01 TRUE 0.6782340567 0.9882441 0.88851665 0.9613886 288681 595 649061 649062 1 118 Same + + 136.4664902 212.685129742 0 5.477111e+02 3.0 1.426345 2.303964 0.7618180 480 Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] J protein-synthesizing GTPase (translation elongation factor G (EF-G)) 1.424563 2.301454 0.6601142 50 GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] J protein-synthesizing GTPase (translation elongation factor Tu (EF-TU)) J TRUE TRUE 98 TRUE 4.0032535 4.1286429 4.0109717 0.8514785 3.7764280 Y 2.5887034 0.9940405 23.99494949 0.454014490 0.99170598 0.366004810 9.900426e-01 TRUE 0.5 9.900426e-01 TRUE 0.8806068991 0.9940405 0.89868091 0.9801607 288681 595 649062 649063 1 399 Same + + 167.2154786 77.615879922 0 4.654586e+02 327.1 1.424563 2.301454 0.6601142 50 GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] J protein-synthesizing GTPase (translation elongation factor Tu (EF-TU)) 1.459792 2.303559 0.9432586 51 Ribosomal protein S10 [Translation, ribosomal structure and biogenesis] J ribosomal protein S10 (30S ribosomal protein S10) J TRUE TRUE 99 TRUE 3.9994861 4.0640414 3.7060310 0.8514785 1.0724158 Y 2.5887034 0.9856601 36.97474747 0.021787590 0.97987295 0.015227347 5.202320e-01 TRUE 0.5 5.202320e-01 TRUE 0.1450725107 0.9856601 0.88397297 0.9531813 288681 595 649063 649064 1 35 Same + + 224.9160628 467.496518148 0 1.157533e+03 56.0 1.459792 2.303559 0.9432586 51 Ribosomal protein S10 [Translation, ribosomal structure and biogenesis] J ribosomal protein S10 (30S ribosomal protein S10) 1.559201 2.486041 0.8629551 87 Ribosomal protein L3 [Translation, ribosomal structure and biogenesis] J ribosomal protein L3 (50S ribosomal protein L3) J TRUE TRUE 100 TRUE 3.9943996 4.3454023 4.2264309 0.8514785 2.2414829 Y 2.5887034 0.9914423 14.98989899 0.740226027 0.98805864 0.664232234 9.957766e-01 TRUE 0.5 9.957766e-01 TRUE 0.9601044603 0.9914423 0.89412949 0.9716833 288681 595 649064 649065 1 26 Same + + 260.3572744 477.519807806 0 1.291073e+03 42.0 1.559201 2.486041 0.8629551 87 Ribosomal protein L3 [Translation, ribosomal structure and biogenesis] J ribosomal protein L3 (50S ribosomal protein L3) 1.496884 2.429274 0.9055534 88 Ribosomal protein L4 [Translation, ribosomal structure and biogenesis] J ribosomal protein L4 (50S ribosomal protein L4) J TRUE TRUE 101 TRUE 3.9903361 4.3887617 4.2376231 0.8514785 2.3391829 Y 2.5887034 0.9915939 13.71212121 0.799871684 0.98827205 0.735081863 9.970396e-01 TRUE 0.5 9.970396e-01 TRUE 0.9713055704 0.9915939 0.89439535 0.9721753 288681 595 649065 649066 1 0 Same + + 268.7206733 514.214440914 0 1.333171e+03 42.0 1.496884 2.429274 0.9055534 88 Ribosomal protein L4 [Translation, ribosomal structure and biogenesis] J ribosomal protein L4 (50S ribosomal protein L4) 1.565851 2.453429 0.8857557 89 Ribosomal protein L23 [Translation, ribosomal structure and biogenesis] J ribosomal protein L23 (50S ribosomal protein L23) J TRUE TRUE 102 TRUE 3.9884961 4.3974559 4.2881568 0.8514785 2.3391829 Y 2.5887034 0.9917918 5.52525253 0.917434052 0.98855035 0.885243655 9.989587e-01 TRUE 0.5 9.989587e-01 TRUE 0.9895236762 0.9917918 0.89474215 0.9728176 288681 595 649066 649067 1 29 Same + + 267.1267456 453.048790188 0 1.306793e+03 56.0 1.565851 2.453429 0.8857557 89 Ribosomal protein L23 [Translation, ribosomal structure and biogenesis] J ribosomal protein L23 (50S ribosomal protein L23) 1.423477 2.295696 0.7807199 90 Ribosomal protein L2 [Translation, ribosomal structure and biogenesis] J ribosomal protein L2 (50S ribosomal protein L2) J TRUE TRUE 103 TRUE 3.9888113 4.3916590 4.2068776 0.8514785 2.2414829 Y 2.5887034 0.9912086 14.23737374 0.775372248 0.98772965 0.705570491 9.964140e-01 TRUE 0.5 9.964140e-01 TRUE 0.9666961536 0.9912086 0.89371974 0.9709259 288681 595 649067 649068 1 61 Same + + 276.6226859 488.960422384 0 1.344732e+03 56.0 1.423477 2.295696 0.7807199 90 Ribosomal protein L2 [Translation, ribosomal structure and biogenesis] J ribosomal protein L2 (50S ribosomal protein L2) 1.662001 2.624743 0.9813326 185 Ribosomal protein S19 [Translation, ribosomal structure and biogenesis] J ribosomal protein S19 (30S ribosomal protein S19) J TRUE TRUE 104 TRUE 3.9872009 4.4061573 4.2544370 0.8514785 2.2414829 Y 2.5887034 0.9913893 17.54040404 0.585638711 0.98798416 0.495258447 9.914684e-01 TRUE 0.5 9.914684e-01 TRUE 0.9226292691 0.9913893 0.89403671 0.9715117 288681 595 649068 649069 1 18 Same + + 247.4357749 510.733333067 0 1.236084e+03 56.0 1.662001 2.624743 0.9813326 185 Ribosomal protein S19 [Translation, ribosomal structure and biogenesis] J ribosomal protein S19 (30S ribosomal protein S19) 1.505894 2.445129 0.9438075 91 Ribosomal protein L22 [Translation, ribosomal structure and biogenesis] J ribosomal protein L22 (50S ribosomal protein L22) J TRUE TRUE 105 TRUE 3.9914945 4.3685042 4.2825283 0.8514785 2.2414829 Y 2.5887034 0.9916302 11.59595960 0.863909874 0.98832307 0.815058379 9.981423e-01 TRUE 0.5 9.981423e-01 TRUE 0.9817517596 0.9916302 0.89445892 0.9722930 288681 595 649069 649070 1 4 Same + + 253.7408274 526.720413973 0 1.238708e+03 56.0 1.505894 2.445129 0.9438075 91 Ribosomal protein L22 [Translation, ribosomal structure and biogenesis] J ribosomal protein L22 (50S ribosomal protein L22) 1.377271 2.216008 0.8245929 92 Ribosomal protein S3 [Translation, ribosomal structure and biogenesis] J ribosomal protein S3 (30S ribosomal protein S3) J TRUE TRUE 106 TRUE 3.9909221 4.3713957 4.3022426 0.8514785 2.2414829 Y 2.5887034 0.9917095 7.19191919 0.916595219 0.98843469 0.884119091 9.989364e-01 TRUE 0.5 9.989364e-01 TRUE 0.9893927470 0.9917095 0.89459802 0.9725506 288681 595 649070 649071 1 2 Same + + 275.2766730 533.649994015 0 1.340174e+03 56.0 1.377271 2.216008 0.8245929 92 Ribosomal protein S3 [Translation, ribosomal structure and biogenesis] J ribosomal protein S3 (30S ribosomal protein S3) 1.358344 2.155253 0.7921683 197 Ribosomal protein L16/L10E [Translation, ribosomal structure and biogenesis] J ribosomal protein L16 (50S ribosomal protein L16) J TRUE TRUE 107 TRUE 3.9875298 4.4003555 4.3135265 0.8514785 2.2414829 Y 2.5887034 0.9916760 6.38383838 0.917967056 0.98838755 0.885958633 9.989512e-01 TRUE 0.5 9.989512e-01 TRUE 0.9895744018 0.9916760 0.89453928 0.9724418 288681 595 649071 649072 1 -34 Same + + 235.5105465 459.278447826 0 1.112586e+03 42.0 1.358344 2.155253 0.7921683 197 Ribosomal protein L16/L10E [Translation, ribosomal structure and biogenesis] J ribosomal protein L16 (50S ribosomal protein L16) 1.941112 3.001674 1.0095043 255 Ribosomal protein L29 [Translation, ribosomal structure and biogenesis] J ribosomal protein L29 (50S ribosomal protein L29) J TRUE TRUE 108 TRUE 3.9931300 4.3367528 4.2152524 0.8514785 2.3391829 Y 2.5887034 0.9916263 0.53030303 0.859415759 0.98831757 0.809307128 9.980701e-01 TRUE 0.5 9.980701e-01 TRUE 0.9810625003 0.9916263 0.89445207 0.9722803 288681 595 649072 649073 1 21 Same + + 216.4966300 481.630371658 0 1.099822e+03 42.0 1.941112 3.001674 1.0095043 255 Ribosomal protein L29 [Translation, ribosomal structure and biogenesis] J ribosomal protein L29 (50S ribosomal protein L29) 1.752240 2.771842 0.9432915 186 Ribosomal protein S17 [Translation, ribosomal structure and biogenesis] J ribosomal protein S17 (30S ribosomal protein S17) J TRUE TRUE 109 TRUE 3.9948838 4.3309907 4.2432243 0.8514785 2.3391829 Y 2.5887034 0.9917751 12.55555556 0.841241116 0.98852696 0.786265537 9.978145e-01 TRUE 0.5 9.978145e-01 TRUE 0.9782745240 0.9917751 0.89471300 0.9727636 288681 595 649073 649074 1 44 Same + + 254.7496356 499.228933270 0 1.235606e+03 56.0 1.752240 2.771842 0.9432915 186 Ribosomal protein S17 [Translation, ribosomal structure and biogenesis] J ribosomal protein S17 (30S ribosomal protein S17) 1.398191 2.281946 0.8902628 93 Ribosomal protein L14 [Translation, ribosomal structure and biogenesis] J ribosomal protein L14 (50S ribosomal protein L14) J TRUE TRUE 110 TRUE 3.9906309 4.3656136 4.2656634 0.8514785 2.2414829 Y 2.5887034 0.9915549 15.93939394 0.689742946 0.98821712 0.606825147 9.946653e-01 TRUE 0.5 9.946653e-01 TRUE 0.9495324450 0.9915549 0.89432692 0.9720486 288681 595 649074 649075 1 39 Same + + 263.6947378 518.400553249 0 1.342860e+03 56.0 1.398191 2.281946 0.8902628 93 Ribosomal protein L14 [Translation, ribosomal structure and biogenesis] J ribosomal protein L14 (50S ribosomal protein L14) 1.414318 2.193425 0.9085722 198 Ribosomal protein L24 [Translation, ribosomal structure and biogenesis] J ribosomal protein L24 (50S ribosomal protein L24) J TRUE TRUE 111 TRUE 3.9894315 4.4032560 4.2966058 0.8514785 2.2414829 Y 2.5887034 0.9916035 15.43434343 0.719741004 0.98828553 0.640663642 9.954057e-01 TRUE 0.5 9.954057e-01 TRUE 0.9560518086 0.9916035 0.89441215 0.9722064 288681 595 649075 649076 1 27 Same + + 262.6427264 517.890884910 0 1.346394e+03 42.0 1.414318 2.193425 0.9085722 198 Ribosomal protein L24 [Translation, ribosomal structure and biogenesis] J ribosomal protein L24 (50S ribosomal protein L24) 1.502617 2.380543 0.8500304 94 Ribosomal protein L5 [Translation, ribosomal structure and biogenesis] J ribosomal protein L5 (50S ribosomal protein L5) J TRUE TRUE 112 TRUE 3.9897365 4.4090594 4.2937886 0.8514785 2.3391829 Y 2.5887034 0.9917980 13.87373737 0.792547031 0.98855907 0.726197629 9.969798e-01 TRUE 0.5 9.969798e-01 TRUE 0.9701302793 0.9917980 0.89475302 0.9728378 288681 595 649076 649077 1 34 Same + + 131.5453483 51.537977114 0 3.980810e+02 42.0 1.502617 2.380543 0.8500304 94 Ribosomal protein L5 [Translation, ribosomal structure and biogenesis] J ribosomal protein L5 (50S ribosomal protein L5) 1.589071 2.405751 0.9798009 199 Ribosomal protein S14 [Translation, ribosomal structure and biogenesis] J ribosomal protein S14 (30S ribosomal protein S14) J TRUE TRUE 113 TRUE 4.0033988 4.0054758 3.6071422 0.8514785 2.3391829 Y 2.5887034 0.9894293 14.86868687 0.745570013 0.98521975 0.670443534 9.949066e-01 TRUE 0.5 9.949066e-01 TRUE 0.9597663944 0.9894293 0.89059800 0.9651858 288681 595 649077 649078 1 30 Same + + 129.5400147 51.605116417 0 3.945177e+02 42.0 1.589071 2.405751 0.9798009 199 Ribosomal protein S14 [Translation, ribosomal structure and biogenesis] J ribosomal protein S14 (30S ribosomal protein S14) 1.424616 2.277297 0.8918269 96 Ribosomal protein S8 [Translation, ribosomal structure and biogenesis] J ribosomal protein S8 (30S ribosomal protein S8) J TRUE TRUE 114 TRUE 4.0034344 3.9999192 3.6097263 0.8514785 2.3391829 Y 2.5887034 0.9894602 14.34848485 0.770031155 0.98526339 0.699213529 9.955530e-01 TRUE 0.5 9.955530e-01 TRUE 0.9646309240 0.9894602 0.89065222 0.9652850 288681 595 649078 649079 1 33 Same + + 292.8597617 566.053768685 0 1.513701e+03 42.0 1.424616 2.277297 0.8918269 96 Ribosomal protein S8 [Translation, ribosomal structure and biogenesis] J ribosomal protein S8 (30S ribosomal protein S8) 1.414325 2.251240 0.8292696 97 Ribosomal protein L6P/L9E [Translation, ribosomal structure and biogenesis] J ribosomal protein L6 (50S ribosomal protein L6) J TRUE TRUE 115 TRUE 3.9858507 4.4352151 4.3474584 0.8514785 2.3391829 Y 2.5887034 0.9919555 14.74747475 0.751095859 0.98878064 0.676893917 9.962539e-01 TRUE 0.5 9.962539e-01 TRUE 0.9625881933 0.9919555 0.89502918 0.9733498 288681 595 649079 649080 1 32 Same + + 272.0707006 568.278392236 0 1.467267e+03 42.0 1.414325 2.251240 0.8292696 97 Ribosomal protein L6P/L9E [Translation, ribosomal structure and biogenesis] J ribosomal protein L6 (50S ribosomal protein L6) 1.465208 2.410688 0.8983711 256 Ribosomal protein L18 [Translation, ribosomal structure and biogenesis] J ribosomal protein L18 (50S ribosomal protein L18) J TRUE TRUE 116 TRUE 3.9881775 4.4323057 4.3531255 0.8514785 2.3391829 Y 2.5887034 0.9919992 14.62121212 0.756997772 0.98884210 0.683814611 9.963909e-01 TRUE 0.5 9.963909e-01 TRUE 0.9637460455 0.9919992 0.89510580 0.9734919 288681 595 649080 649081 1 22 Same + + 250.7078190 538.677957748 0 1.271540e+03 56.0 1.465208 2.410688 0.8983711 256 Ribosomal protein L18 [Translation, ribosomal structure and biogenesis] J ribosomal protein L18 (50S ribosomal protein L18) 1.544177 2.530501 0.9427951 98 Ribosomal protein S5 [Translation, ribosomal structure and biogenesis] J ribosomal protein L18 (50S ribosomal protein L18) J TRUE TRUE 117 TRUE 3.9912100 4.3742880 4.3248238 0.8514785 2.2414829 Y 2.5887034 0.9918057 12.82323232 0.833791394 0.98856996 0.776920187 9.977005e-01 TRUE 0.5 9.977005e-01 TRUE 0.9770926043 0.9918057 0.89476659 0.9728629 288681 595 649081 649082 1 14 Same + + 177.9060232 505.646735449 0 1.065313e+03 56.0 1.544177 2.530501 0.9427951 98 Ribosomal protein S5 [Translation, ribosomal structure and biogenesis] J ribosomal protein L18 (50S ribosomal protein L18) 1.758149 2.816192 1.0244229 1841 Ribosomal protein L30/L7E [Translation, ribosomal structure and biogenesis] J ribosomal protein L30 (50S ribosomal protein L30) J TRUE TRUE 118 TRUE 3.9977027 4.3223537 4.2740920 0.8514785 2.2414829 Y 2.5887034 0.9917313 9.75757576 0.894857333 0.98846531 0.855253573 9.986308e-01 TRUE 0.5 9.986308e-01 TRUE 0.9863509713 0.9917313 0.89463617 0.9726213 288681 595 649082 649083 1 34 Same + + 190.9804400 487.540181586 0 1.164245e+03 7.0 1.758149 2.816192 1.0244229 1841 Ribosomal protein L30/L7E [Translation, ribosomal structure and biogenesis] J ribosomal protein L30 (50S ribosomal protein L30) 1.465303 2.392672 0.9061927 200 Ribosomal protein L15 [Translation, ribosomal structure and biogenesis] J ribosomal protein L15 (50S ribosomal protein L15) J TRUE TRUE 119 TRUE 3.9962554 4.3482872 4.2516326 0.8514785 3.3558478 Y 2.5887034 0.9937530 14.86868687 0.745570013 0.99130331 0.670443534 9.970151e-01 TRUE 0.5 9.970151e-01 TRUE 0.9627542951 0.9937530 0.89817765 0.9792176 288681 595 649083 649084 1 0 Same + + 233.7650443 286.812879730 0 9.763692e+02 327.1 1.465303 2.392672 0.9061927 200 Ribosomal protein L15 [Translation, ribosomal structure and biogenesis] J ribosomal protein L15 (50S ribosomal protein L15) 2.032027 3.345642 1.0248742 201 Preprotein translocase subunit SecY [Intracellular trafficking and secretion] U preprotein translocase, secY subunit - TRUE TRUE 120 TRUE 3.9936480 4.2993586 4.0876982 0.8514785 1.0724158 N 0.9519411 0.9799337 5.52525253 0.917434052 0.97167090 0.885243655 9.973830e-01 TRUE 0.5 9.973830e-01 TRUE 0.9871776156 0.9799337 0.87387614 0.9353358 288681 595 649084 649085 1 57 Same + + 142.2637445 138.582005953 0 5.072628e+02 327.1 2.032027 3.345642 1.0248742 201 Preprotein translocase subunit SecY [Intracellular trafficking and secretion] U preprotein translocase, secY subunit 1.642251 2.611192 0.9312978 563 Adenylate kinase and related kinases [Nucleotide transport and metabolism] F adenylate kinase (ATP-AMP transphosphorylase) - TRUE TRUE 121 TRUE 4.0028527 4.0976873 3.8730483 0.8514785 1.0724158 N 0.9519411 0.9788017 17.18181818 0.605556134 0.97003820 0.515929321 9.802776e-01 TRUE 0.5 9.802776e-01 TRUE 0.9126410076 0.9788017 0.87187572 0.9318629 288681 595 649085 649086 1 0 Same + + 68.9980037 10.394833199 0 1.589882e+02 327.1 1.642251 2.611192 0.9312978 563 Adenylate kinase and related kinases [Nucleotide transport and metabolism] F adenylate kinase (ATP-AMP transphosphorylase) 2.169294 3.462787 1.0184318 24 Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] J methionyl aminopeptidase - TRUE TRUE 122 TRUE 3.9891860 3.6495932 2.6485996 0.8514785 1.0724158 N 0.9519411 0.9635755 5.52525253 0.917434052 0.94770379 0.885243655 9.950583e-01 TRUE 0.5 9.950583e-01 TRUE 0.9837381643 0.9635755 0.84482230 0.8868200 288681 595 649086 649087 1 69 Same + + 100.9823882 8.735181705 0 1.494542e+02 327.1 2.169294 3.462787 1.0184318 24 Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] J methionyl aminopeptidase 1.615988 2.616322 0.9573836 361 Translation initiation factor 1 (IF-1) [Translation, ribosomal structure and biogenesis] J protein-synthesizing GTPase (initiation factor IF-I) J TRUE TRUE 123 TRUE 4.0025891 3.6204837 2.5642313 0.8514785 1.0724158 Y 2.5887034 0.9765411 18.42424242 0.550143454 0.96676621 0.459170805 9.726588e-01 TRUE 0.5 9.726588e-01 TRUE 0.8892950550 0.9765411 0.86787626 0.9249802 288681 595 649087 649088 1 171 Same + + 169.6321264 47.723227871 0 5.745640e+02 64.0 1.615988 2.616322 0.9573836 361 Translation initiation factor 1 (IF-1) [Translation, ribosomal structure and biogenesis] J protein-synthesizing GTPase (initiation factor IF-I) 1.355406 2.155355 0.8884514 99 Ribosomal protein S13 [Translation, ribosomal structure and biogenesis] J ribosomal protein S13 (30S ribosomal protein S13) J TRUE TRUE 124 TRUE 3.9986360 4.1371041 3.5813556 0.8514785 2.1579507 Y 2.5887034 0.9883005 28.57070707 0.333331117 0.98362279 0.257674872 9.677730e-01 TRUE 0.5 9.677730e-01 TRUE 0.7995559148 0.9883005 0.88861568 0.9615688 288681 595 649088 649089 1 25 Same + + 297.9099718 542.242312661 0 1.451282e+03 42.0 1.355406 2.155355 0.8884514 99 Ribosomal protein S13 [Translation, ribosomal structure and biogenesis] J ribosomal protein S13 (30S ribosomal protein S13) 1.309673 2.171753 0.8424842 100 Ribosomal protein S11 [Translation, ribosomal structure and biogenesis] J ribosomal protein S11 (30A ribosomal protein S11) J TRUE TRUE 125 TRUE 3.9855045 4.4293971 4.3304774 0.8514785 2.3391829 Y 2.5887034 0.9918919 13.54545455 0.807129323 0.98869120 0.743936923 9.972742e-01 TRUE 0.5 9.972742e-01 TRUE 0.9727069784 0.9918919 0.89491769 0.9731430 288681 595 649089 649090 1 182 Same + + 283.0604851 196.238679589 0 1.408401e+03 327.1 1.309673 2.171753 0.8424842 100 Ribosomal protein S11 [Translation, ribosomal structure and biogenesis] J ribosomal protein S11 (30A ribosomal protein S11) 1.693127 2.693991 0.9275155 202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription] K DNA-directed RNA polymerase - TRUE TRUE 126 TRUE 3.9865327 4.4206761 3.9783049 0.8514785 1.0724158 N 0.9519411 0.9779153 29.28787879 0.289921443 0.96875699 0.220853900 9.267939e-01 TRUE 0.5 9.267939e-01 TRUE 0.7326130085 0.9779153 0.87030816 0.9291557 288681 595 649090 649091 1 36 Same + + 245.1010052 555.214368442 0 1.287318e+03 327.1 1.693127 2.693991 0.9275155 202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription] K DNA-directed RNA polymerase 1.449789 2.311167 0.9244752 203 Ribosomal protein L17 [Translation, ribosomal structure and biogenesis] J ribosomal protein L17 (50S ribosomal protein L17) - TRUE TRUE 127 TRUE 3.9917756 4.3829698 4.3417948 0.8514785 1.0724158 N 0.9519411 0.9820731 15.09595960 0.735734872 0.97474638 0.659032432 9.907801e-01 TRUE 0.5 9.907801e-01 TRUE 0.9523161757 0.9820731 0.87765277 0.9419484 288681 595 649091 649092 1 44 Same + + 21.7580265 -0.973836945 0 5.298467e+01 327.1 1.449789 2.311167 0.9244752 203 Ribosomal protein L17 [Translation, ribosomal structure and biogenesis] J ribosomal protein L17 (50S ribosomal protein L17) 2.174551 3.467474 0.9441007 1122 ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter, ATP-binding protein - TRUE TRUE 128 TRUE 3.8220760 3.0157294 0.5187647 0.8514785 1.0724158 N 0.9519411 0.8973761 15.93939394 0.689742946 0.84178907 0.606825147 9.220490e-01 TRUE 0.5 9.220490e-01 TRUE 0.8535968088 0.8973761 0.72395728 0.7214485 288681 595 649092 649093 1 -24 Same + + 40.1987169 39.017992206 0 1.579528e+02 110.0 2.174551 3.467474 0.9441007 1122 ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter, ATP-binding protein 2.113616 3.353693 0.9887511 1122 ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter, ATP-binding protein P TRUE TRUE 129 TRUE 3.9540396 3.6389936 3.5147789 0.8514785 1.9349386 Y 2.5887034 0.9883985 0.93939394 0.869378239 0.98376148 0.822085439 9.975261e-01 TRUE 0.5 9.975261e-01 TRUE 0.9815467677 0.9883985 0.88878772 0.9618818 288681 595 649093 649094 1 -12 Same + + 51.7977250 46.741498161 0 1.837550e+02 327.1 2.113616 3.353693 0.9887511 1122 ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter, ATP-binding protein 2.210643 3.595233 1.0232926 619 ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism] P ABC transporter, permease; possible cobalt transport protein P TRUE TRUE 130 TRUE 3.9728914 3.7081818 3.5633643 0.8514785 1.0724158 Y 2.5887034 0.9856733 1.94444444 0.888631490 0.97989175 0.847083396 9.974348e-01 TRUE 0.5 9.974348e-01 TRUE 0.9838200124 0.9856733 0.88399620 0.9532230 288681 595 649094 649095 1 15 Same + + 17.8423513 34.924108039 0 4.249317e+01 327.1 2.210643 3.595233 1.0232926 619 ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism] P ABC transporter, permease; possible cobalt transport protein 1.889747 2.987404 0.9273697 101 Pseudouridylate synthase [Translation, ribosomal structure and biogenesis] J tRNA-pseudouridylate synthase I - TRUE TRUE 131 TRUE 3.7462655 2.8711021 3.4362949 0.8514785 1.0724158 N 0.9519411 0.9770799 10.24242424 0.888318768 0.96754744 0.846674136 9.958009e-01 TRUE 0.5 9.958009e-01 TRUE 0.9813729114 0.9770799 0.86883004 0.9266143 288681 595 649095 649096 1 153 Same + + 39.3469632 31.721209590 0 7.661213e+01 327.1 1.889747 2.987404 0.9273697 101 Pseudouridylate synthase [Translation, ribosomal structure and biogenesis] J tRNA-pseudouridylate synthase I 1.531157 2.445804 0.8993376 102 Ribosomal protein L13 [Translation, ribosomal structure and biogenesis] J ribosomal protein L13 (50S ribosomal protein L13) J TRUE TRUE 132 TRUE 3.9507588 3.1895138 3.3637711 0.8514785 1.0724158 Y 2.5887034 0.9859162 27.21212121 0.398672737 0.98023741 0.315197723 9.704881e-01 TRUE 0.5 9.704881e-01 TRUE 0.8353466899 0.9859162 0.88442348 0.9539901 288681 595 649096 649097 1 22 Same + + 290.3973297 535.916239499 0 1.399088e+03 42.0 1.531157 2.445804 0.8993376 102 Ribosomal protein L13 [Translation, ribosomal structure and biogenesis] J ribosomal protein L13 (50S ribosomal protein L13) 1.500864 2.435383 0.9419768 103 Ribosomal protein S9 [Translation, ribosomal structure and biogenesis] J ribosomal protein S9 (30S ribosomal protein S9) J TRUE TRUE 133 TRUE 3.9861934 4.4177707 4.3191734 0.8514785 2.3391829 Y 2.5887034 0.9918715 12.82323232 0.833791394 0.98866248 0.776920187 9.977193e-01 TRUE 0.5 9.977193e-01 TRUE 0.9771200129 0.9918715 0.89488190 0.9730767 288681 595 649097 649098 1 163 Same + + 0.0000000 -3.618499188 0 -2.211880e+00 NA 1.500864 2.435383 0.9419768 103 Ribosomal protein S9 [Translation, ribosomal structure and biogenesis] J ribosomal protein S9 (30S ribosomal protein S9) 2.319940 3.520076 0.8969247 - - - conserved hypothetical protein TRUE TRUE 134 TRUE 0.5353044 0.4974762 0.4814574 0.8514785 0.6429928 U 0.6519531 0.5928356 28.02525253 0.363947825 0.04983706 0.284305986 2.913790e-02 FALSE 0.5 2.913790e-02 FALSE 0.0536055828 0.5928356 0.09007364 0.3013144 288681 595 649098 649099 1 67 Same + + 0.0000000 5.384187873 0 5.384188e+00 NA 2.319940 3.520076 0.8969247 - - - conserved hypothetical protein 1.830266 2.960876 0.8682576 860 N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane] M N-acetylmuramoyl-L-alanine amidase TRUE TRUE 135 TRUE 0.5353044 1.8286724 2.3136108 0.8514785 0.6429928 U 0.6519531 0.7339065 18.15656566 0.559803760 0.49840175 0.468898729 5.582278e-01 TRUE 0.5 5.582278e-01 TRUE 0.4597679238 0.7339065 0.40091774 0.4496184 288681 595 649099 649100 1 145 Same + + 0.0000000 3.325379821 0 4.712743e+00 327.1 1.830266 2.960876 0.8682576 860 N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane] M N-acetylmuramoyl-L-alanine amidase 1.713681 2.762482 0.9078078 489 ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] D ATP-binding protein; Mrp protein - TRUE TRUE 136 TRUE 0.5353044 1.7448040 2.0152183 0.8514785 1.0724158 N 0.9519411 0.7463518 26.61616162 0.411591461 0.52983451 0.326881909 4.408014e-01 FALSE 0.5 4.408014e-01 FALSE 0.3425037524 0.7463518 0.42683742 0.4656796 288681 595 649104 595293 1 252 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.014308 3.029973 0.9511102 - - - conserved hypothetical protein NA NA NA TRUE TRUE 137 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 32.62626263 0.108300815 0.10149799 0.077762195 1.353424e-02 FALSE 0.5 1.353424e-02 FALSE 0.0164539906 0.6062567 0.12106533 0.3132127 288681 595 595293 595294 1 183 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 138 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 29.38888889 0.283752548 0.10149799 0.215708174 4.283529e-02 FALSE 0.5 4.283529e-02 FALSE 0.0517446203 0.6062567 0.12106533 0.3132127 288681 595 595294 595295 1 86 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 139 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 20.35353535 0.493576367 0.10149799 0.403566248 9.917850e-02 FALSE 0.5 9.917850e-02 FALSE 0.1183575806 0.6062567 0.12106533 0.3132127 288681 595 595295 649117 1 927 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 1.942566 3.189585 0.9165305 1929 Glycerate kinase [Carbohydrate transport and metabolism] G glycerate kinase TRUE TRUE 140 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 39.90909091 0.006637701 0.10149799 0.004617557 7.542594e-04 FALSE 0.5 7.542594e-04 FALSE 0.0009195465 0.6062567 0.12106533 0.3132127 288681 595 649117 649118 1 210 Same + + 0.0000000 -20.525080713 0 -2.269862e+01 327.1 1.942566 3.189585 0.9165305 1929 Glycerate kinase [Carbohydrate transport and metabolism] G glycerate kinase 1.563774 2.570471 0.9009776 10 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family [Amino acid transport and metabolism] E arginase - TRUE TRUE 141 TRUE 0.5353044 0.5658079 0.4178818 0.8514785 1.0724158 N 0.9519411 0.6288584 30.77272727 0.202505084 0.18351318 0.149867323 5.399100e-02 FALSE 0.5 5.399100e-02 FALSE 0.0502908992 0.6288584 0.17255578 0.3341613 288681 595 649118 649119 1 249 Same + + 0.0000000 2.103058508 0 7.568308e-01 NA 1.563774 2.570471 0.9009776 10 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family [Amino acid transport and metabolism] E arginase 2.265072 3.704229 1.0308046 1624 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein TRUE TRUE 142 TRUE 0.5353044 1.1587048 1.8256702 0.8514785 0.6429928 U 0.6519531 0.7171995 32.45959596 0.114514892 0.45449012 0.082385922 9.726626e-02 FALSE 0.5 9.726626e-02 FALSE 0.0694029603 0.7171995 0.36575628 0.4289506 288681 595 649119 649120 1 -7 Same + + 9.4454125 15.681178169 0 3.780226e+01 NA 2.265072 3.704229 1.0308046 1624 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein 1.977423 3.156474 0.9161603 4856 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein TRUE TRUE 143 TRUE 3.4841885 2.8232027 2.8906367 0.8514785 0.6429928 U 0.6519531 0.9561481 2.65151515 0.898487914 0.93655087 0.860037783 9.924039e-01 TRUE 0.5 9.924039e-01 TRUE 0.9776214252 0.9561481 0.83152628 0.8659192 288681 595 649120 649121 1 -7 Same + + 6.1777465 9.659632666 0 1.532579e+01 NA 1.977423 3.156474 0.9161603 4856 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein 1.339313 2.170561 0.7904018 1109 Phosphomannomutase [Carbohydrate transport and metabolism] G phosphoglucosamine mutase TRUE TRUE 144 TRUE 3.2611949 2.3230216 2.6167291 0.8514785 0.6429928 U 0.6519531 0.9486258 2.65151515 0.898487914 0.92507736 0.860037783 9.909326e-01 TRUE 0.5 9.909326e-01 TRUE 0.9754777279 0.9486258 0.81799323 0.8454212 288681 595 649121 649122 1 267 Same + + 0.0000000 0.166789706 0 1.667897e-01 NA 1.339313 2.170561 0.7904018 1109 Phosphomannomutase [Carbohydrate transport and metabolism] G phosphoglucosamine mutase 2.805743 4.407733 0.9784209 - - - group-specific protein TRUE TRUE 145 TRUE 0.5353044 0.4951167 0.6656226 0.8514785 0.6429928 U 0.6519531 0.6170701 33.26767677 0.087676990 0.14148639 0.062545954 1.559121e-02 FALSE 0.5 1.559121e-02 FALSE 0.0161398286 0.6170701 0.14580877 0.3230882 288681 595 649122 649123 1 13 Same + + 0.0000000 0.166789706 0 1.667897e-01 NA 2.805743 4.407733 0.9784209 - - - group-specific protein 1.429461 2.325660 0.8328333 449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] M glutamine-fructose-6-phosphate transaminase (isomerizing) TRUE TRUE 146 TRUE 0.5353044 0.4951167 0.6656226 0.8514785 0.6429928 U 0.6519531 0.6170701 9.23232323 0.901297905 0.14148639 0.863750725 6.007835e-01 TRUE 0.5 6.007835e-01 TRUE 0.6091809157 0.6170701 0.14580877 0.3230882 288681 595 649123 649124 1 337 Same + + 0.0000000 -33.761313812 0 -1.540446e+01 NA 1.429461 2.325660 0.8328333 449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] M glutamine-fructose-6-phosphate transaminase (isomerizing) 2.388142 3.922085 1.0428929 - - - conserved hypothetical protein; possible hydrolase TRUE TRUE 147 TRUE 0.5353044 0.5584047 0.3931125 0.8514785 0.6429928 U 0.6519531 0.5770561 35.66161616 0.036449982 0.01666018 0.025590387 6.405025e-04 FALSE 0.5 6.405025e-04 FALSE 0.0021224132 0.5770561 0.05323205 0.2878096 288681 595 649124 649125 1 409 Same + + 0.0000000 -32.990843312 0 -1.017639e+01 NA 2.388142 3.922085 1.0428929 - - - conserved hypothetical protein; possible hydrolase 2.170714 3.450162 0.9542336 1802 Transcriptional regulators [Transcription] K gluconate operon transcriptional repressor TRUE TRUE 148 TRUE 0.5353044 0.5474358 0.3947503 0.8514785 0.6429928 U 0.6519531 0.5780063 37.06060606 0.021050186 0.01666018 0.014708637 3.641777e-04 FALSE 0.5 3.641777e-04 FALSE 0.0012610472 0.5780063 0.05546293 0.2886084 288681 595 649125 649126 1 -7 Same + + 0.0000000 12.406647372 0 1.221921e+01 327.1 2.170714 3.450162 0.9542336 1802 Transcriptional regulators [Transcription] K gluconate operon transcriptional repressor 2.047574 3.334245 0.9890045 1070 Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] G gluconokinase - TRUE TRUE 149 TRUE 0.5353044 2.1965953 2.7568202 0.8514785 1.0724158 N 0.9519411 0.7960226 2.65151515 0.898487914 0.64549756 0.860037783 9.415767e-01 TRUE 0.5 9.415767e-01 TRUE 0.9082775149 0.7960226 0.52803233 0.5361547 288681 595 649126 649127 1 120 Same + + 0.0000000 11.014156635 0 1.079101e+01 327.1 2.047574 3.334245 0.9890045 1070 Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] G gluconokinase 2.029634 3.431920 1.0684357 2610 H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism] GE gluconate permease G TRUE TRUE 150 TRUE 0.5353044 2.1586176 2.6721471 0.8514785 1.0724158 Y 2.5887034 0.8591242 24.21717172 0.452082714 0.77314779 0.364197715 7.376737e-01 TRUE 0.5 7.376737e-01 TRUE 0.6068007413 0.8591242 0.65161442 0.6436607 288681 595 649127 649128 1 265 Same + + 4.3502779 -18.684604562 0 -1.526591e+01 327.1 2.029634 3.431920 1.0684357 2610 H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism] GE gluconate permease 1.816173 2.934782 0.9618860 362 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] G phosphogluconate dehydrogenase, decarboxylating (6-phosphogluconate dehydrogenase) G TRUE TRUE 151 TRUE 3.1029163 0.5580203 0.4197735 0.8514785 1.0724158 Y 2.5887034 0.9412997 33.19696970 0.089809531 0.91372697 0.064110195 5.110112e-01 TRUE 0.5 5.110112e-01 TRUE 0.2891070669 0.9412997 0.80474798 0.8260762 288681 595 649128 649129 1 193 Same + + 0.0000000 -33.283657346 0 -6.973919e+00 327.1 1.816173 2.934782 0.9618860 362 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] G phosphogluconate dehydrogenase, decarboxylating (6-phosphogluconate dehydrogenase) 2.007741 3.252309 0.8916474 1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] E prolyl oligopeptidase family (peptidase_S9) - TRUE TRUE 152 TRUE 0.5353044 0.5375370 0.3944436 0.8514785 1.0724158 N 0.9519411 0.6276673 29.93434343 0.251096554 0.17933841 0.188818730 6.826770e-02 FALSE 0.5 6.826770e-02 FALSE 0.0642020352 0.6276673 0.16986389 0.3330275 288681 595 649129 649130 1 119 Same + + 0.0000000 -0.357287850 0 -3.572879e-01 NA 2.007741 3.252309 0.8916474 1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] E prolyl oligopeptidase family (peptidase_S9) 1.893100 3.010469 0.9674438 - - - conserved hypothetical protein TRUE TRUE 153 TRUE 0.5353044 0.4766577 0.5321309 0.8514785 0.6429928 U 0.6519531 0.6008772 24.13131313 0.452867000 0.08106808 0.364931082 6.805129e-02 FALSE 0.5 6.805129e-02 FALSE 0.0916725347 0.6008772 0.10868068 0.3083968 288681 595 649131 649132 1 241 Same - - 0.0000000 0.154137433 0 1.541374e-01 NA 1.785392 3.002173 0.9877963 - - - conserved hypothetical protein 1.853715 3.020497 0.9375720 - - - conserved hypothetical protein FALSE TRUE 153 TRUE 0.5353044 0.4947644 0.6369183 0.8514785 0.6429928 U 0.6519531 0.6133743 32.16666667 0.126706117 0.12797777 0.091510190 2.084940e-02 FALSE 0.5 2.084940e-02 FALSE 0.0225839848 0.6133743 0.13737453 0.3196832 288681 595 649132 649133 1 0 Same - - 4.5558991 0.154137433 0 4.710037e+00 327.1 1.853715 3.020497 0.9375720 - - - conserved hypothetical protein 2.021725 3.173478 0.9187067 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K RNA polymerase sigma-70 factor, ECF subfamily FALSE TRUE 152 TRUE 3.1309345 1.7431508 0.6369183 0.8514785 1.0724158 U 0.6519531 0.8826932 5.52525253 0.917434052 0.81614480 0.885243655 9.801291e-01 TRUE 0.5 9.801291e-01 TRUE 0.9622486168 0.8826932 0.69641146 0.6902821 288681 595 649133 649134 1 141 Same - - 0.0000000 0.123560178 0 1.235602e-01 NA 2.021725 3.173478 0.9187067 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K RNA polymerase sigma-70 factor, ECF subfamily 1.640608 2.649910 0.8841083 - - - group-specific protein FALSE TRUE 151 TRUE 0.5353044 0.4889180 0.5876282 0.8514785 0.6429928 U 0.6519531 0.6073393 26.30808081 0.416021451 0.10556568 0.330912911 7.755892e-02 FALSE 0.5 7.755892e-02 FALSE 0.0912600382 0.6073393 0.12355164 0.3141896 288681 595 649136 649137 1 -25 Same - - 3.4339872 6.019784163 0 8.236808e+01 327.1 2.069603 3.418756 1.0323994 2011 ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism] P ABC transporter, permease 1.907545 3.058154 0.9546852 1135 ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter, ATP-binding protein P FALSE TRUE 150 TRUE 2.9880617 3.2314317 2.3896715 0.8514785 1.0724158 Y 2.5887034 0.9544957 0.84848485 0.867280552 0.93404603 0.819386049 9.893099e-01 TRUE 0.5 9.893099e-01 TRUE 0.9693078731 0.9544957 0.82855932 0.8613598 288681 595 649137 649138 1 13 Same - - 8.6044712 5.562439769 0 1.241677e+02 NA 1.907545 3.058154 0.9546852 1135 ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter, ATP-binding protein 1.528568 2.465564 0.8291867 1464 ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism] P lipoprotein, NLPA family P FALSE TRUE 149 TRUE 3.4356519 3.4871643 2.3348750 0.8514785 0.6429928 Y 2.5887034 0.9582721 9.23232323 0.901297905 0.93975782 0.863750725 9.930288e-01 TRUE 0.5 9.930288e-01 TRUE 0.9788688669 0.9582721 0.83533511 0.8718275 288681 595 649138 649139 1 280 Same - - 0.0000000 0.269149343 0 1.637888e-01 NA 1.528568 2.465564 0.8291867 1464 ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism] P lipoprotein, NLPA family 2.286769 3.668130 0.9351037 604 NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] CR alcohol dehydrogenase, zinc containing - FALSE TRUE 148 TRUE 0.5353044 0.4951066 0.9273345 0.8514785 0.6429928 N 0.9519411 0.6701289 33.81313131 0.072410187 0.31899799 0.051408525 3.527655e-02 FALSE 0.5 3.527655e-02 FALSE 0.0272889344 0.6701289 0.26437281 0.3756676 288681 595 649140 649141 1 112 Same + + 0.0000000 0.295578025 0 2.955780e-01 NA 1.828299 2.866930 0.8905065 - - - group-specific protein 1.944634 3.128133 0.8774616 277 FAD/FMN-containing dehydrogenases [Energy production and conversion] C oxidoreductase, FAD-binding TRUE TRUE 148 TRUE 0.5353044 0.7407197 1.0832980 0.8514785 0.6429928 U 0.6519531 0.6544328 23.33333333 0.459452889 0.26948369 0.371105540 2.387056e-01 FALSE 0.5 2.387056e-01 FALSE 0.2022830549 0.6544328 0.22978237 0.3593550 288681 595 649141 649142 1 -3 Same + + 0.0000000 2.275081984 0 2.275082e+00 327.1 1.944634 3.128133 0.8774616 277 FAD/FMN-containing dehydrogenases [Energy production and conversion] C oxidoreductase, FAD-binding 2.058643 3.504655 1.0109853 - - - probable membrane transport protein; possible multidrug resistance protein TRUE TRUE 149 TRUE 0.5353044 1.4335684 1.8467953 0.8514785 1.0724158 U 0.6519531 0.7278479 4.11111111 0.911770020 0.48271063 0.877665818 9.060435e-01 TRUE 0.5 9.060435e-01 TRUE 0.8676825450 0.7278479 0.38821560 0.4420083 288681 595 649142 649143 1 79 Same + + 0.0000000 -3.072152409 0 3.184833e-01 NA 2.058643 3.504655 1.0109853 - - - probable membrane transport protein; possible multidrug resistance protein 1.843070 3.008293 0.9282287 - - - conserved hypothetical protein TRUE TRUE 150 TRUE 0.5353044 0.8506613 0.4912468 0.8514785 0.6429928 U 0.6519531 0.5706561 19.62121212 0.513747576 0.01666018 0.423132459 1.758566e-02 FALSE 0.5 1.758566e-02 FALSE 0.0402341839 0.5706561 0.03816307 0.2824750 288681 595 649143 649144 1 128 Same + + 0.0000000 -0.302356621 0 -6.090869e-01 NA 1.843070 3.008293 0.9282287 - - - conserved hypothetical protein 2.073649 3.501168 1.0715462 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G drug resistance transporter Bcr/CflA subfamily; possible bicyclomycin resistance protein TRUE TRUE 151 TRUE 0.5353044 0.4795386 0.5338607 0.8514785 0.6429928 U 0.6519531 0.6009154 25.04040404 0.439511809 0.08121443 0.352498405 6.482130e-02 FALSE 0.5 6.482130e-02 FALSE 0.0873425371 0.6009154 0.10876879 0.3084308 288681 595 649144 649145 1 251 Same + + 0.0000000 -5.582622440 0 3.500932e-01 NA 2.073649 3.501168 1.0715462 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G drug resistance transporter Bcr/CflA subfamily; possible bicyclomycin resistance protein 1.687568 2.585483 0.8274969 - - - group-specific protein TRUE TRUE 152 TRUE 0.5353044 0.9334597 0.4604073 0.8514785 0.6429928 U 0.6519531 0.5609508 32.59090909 0.109574891 0.01666018 0.078708718 2.080583e-03 FALSE 0.5 2.080583e-03 FALSE 0.0027211577 0.5609508 0.02169197 0.2745369 288681 595 649147 649148 1 18 Same + + 7.2930177 29.607991541 0 3.690101e+01 200.0 1.873079 3.125809 0.9445962 601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transporter, permease 1.960771 3.224839 1.0012525 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transporter, permease EP TRUE TRUE 153 TRUE 3.3438491 2.8073607 3.3241344 0.8514785 1.6052993 Y 2.5887034 0.9830370 11.59595960 0.863909874 0.97612768 0.815058379 9.961623e-01 TRUE 0.5 9.961623e-01 TRUE 0.9788443359 0.9830370 0.87935262 0.9449488 288681 595 649148 649149 1 -43 Same + + 0.0000000 0.385622589 0 3.856226e-01 327.1 1.960771 3.224839 1.0012525 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transporter, permease 1.927210 3.068616 0.9220059 444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transportor, ATP-binding protein EP TRUE TRUE 154 TRUE 0.5353044 1.0562138 1.4393128 0.8514785 1.0724158 Y 2.5887034 0.8076252 0.33333333 0.854118245 0.67046548 0.802555215 9.225540e-01 TRUE 0.5 9.225540e-01 TRUE 0.8778954386 0.8076252 0.55116441 0.5542619 288681 595 649149 649150 1 -3 Same + + 0.0000000 0.385622589 0 3.856226e-01 110.0 1.927210 3.068616 0.9220059 444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transportor, ATP-binding protein 1.818449 2.908329 0.9295067 1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transporter, ATP-binding protein EP TRUE TRUE 155 TRUE 0.5353044 1.0562138 1.4393128 0.8514785 1.9349386 Y 2.5887034 0.8414441 4.11111111 0.911770020 0.73931279 0.877665818 9.670048e-01 TRUE 0.5 9.670048e-01 TRUE 0.9434557249 0.8414441 0.61753167 0.6111778 288681 595 649150 649151 1 14 Same + + 0.0000000 0.385622589 0 3.856226e-01 327.1 1.818449 2.908329 0.9295067 1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transporter, ATP-binding protein 1.544353 2.453428 0.8099343 4166 ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism] E oligopeptide ABC transporter, oligopeptide-binding protein E TRUE TRUE 156 TRUE 0.5353044 1.0562138 1.4393128 0.8514785 1.0724158 Y 2.5887034 0.8076252 9.75757576 0.894857333 0.67046548 0.855253573 9.454033e-01 TRUE 0.5 9.454033e-01 TRUE 0.9126733737 0.8076252 0.55116441 0.5542619 288681 595 649153 649154 1 276 Same + + 0.0000000 -1.603937779 0 -1.603938e+00 211.0 2.028782 3.248493 0.8793769 2207 AraC-type DNA-binding domain-containing proteins [Transcription] K transcriptional regulator, AraC family; possible arabinose operon regulator 1.676939 2.665042 0.8169033 1309 Transcriptional regulator [Transcription] K transcriptional regulator, TetR family K TRUE TRUE 157 TRUE 0.5353044 0.4902862 0.5097407 0.8514785 1.4198236 Y 2.5887034 0.7640484 33.66666667 0.076297966 0.57276733 0.054234632 9.969730e-02 FALSE 0.5 9.969730e-02 FALSE 0.0665578417 0.7640484 0.46330003 0.4895661 288681 595 649154 649155 1 59 Same + + 1.3545457 0.152827318 0 1.507373e+00 NA 1.676939 2.665042 0.8169033 1309 Transcriptional regulator [Transcription] K transcriptional regulator, TetR family 1.839226 3.040728 0.9046604 - - - conserved hypothetical protein TRUE TRUE 158 TRUE 2.5336980 1.3195983 0.6324913 0.8514785 0.6429928 U 0.6519531 0.8327167 17.36868687 0.594632578 0.72208138 0.504554438 7.921542e-01 TRUE 0.5 7.921542e-01 TRUE 0.6880294265 0.8327167 0.60055375 0.5958634 288681 595 649156 649157 1 388 Same - - 0.0000000 -38.636422852 0 3.184833e-01 200.0 1.590278 2.540646 0.8460534 4166 ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism] E bacterial extracellular solute-binding protein, family 5 (SBP_bac_5) 1.605207 2.559521 0.8801447 4166 ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism] E bacterial extracellular solute-binding protein, family 5 (SBP_bac_5) E FALSE TRUE 158 TRUE 0.5353044 0.8506613 0.3818762 0.8514785 1.6052993 Y 2.5887034 0.7421038 36.73737374 0.023954365 0.51922409 0.016752879 2.582056e-02 FALSE 0.5 2.582056e-02 FALSE 0.0173223905 0.7421038 0.41801621 0.4601313 288681 595 649157 649158 1 393 Same - - 0.0000000 -42.965453197 0 3.184833e-01 327.1 1.605207 2.559521 0.8801447 4166 ABC-type oligopeptide transport system, periplasmic component [Amino acid transport and metabolism] E bacterial extracellular solute-binding protein, family 5 (SBP_bac_5) 1.400269 2.229960 0.7851041 656 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] R aldo/keto reductase family; possible 2,5-didehydrogluconate reductase (2,5-diketo-D-gluconic acid reductase) FALSE TRUE 157 TRUE 0.5353044 0.8506613 0.3737205 0.8514785 1.0724158 U 0.6519531 0.5834352 36.84343434 0.022962497 0.01666018 0.016054295 3.980256e-04 FALSE 0.5 3.980256e-04 FALSE 0.0017166425 0.5834352 0.06817900 0.2932079 288681 595 649158 649159 1 2 Same - - 0.0000000 -1.377472977 0 -1.377473e+00 327.1 1.400269 2.229960 0.7851041 656 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] R aldo/keto reductase family; possible 2,5-didehydrogluconate reductase (2,5-diketo-D-gluconic acid reductase) 1.942537 3.187968 0.9810280 345 Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] E pyrroline-5-carboxylate reductase (P5CR) FALSE TRUE 156 TRUE 0.5353044 0.4874548 0.5133802 0.8514785 1.0724158 U 0.6519531 0.6254133 6.38383838 0.917967056 0.17139457 0.885958633 6.983103e-01 TRUE 0.5 6.983103e-01 TRUE 0.6882251464 0.6254133 0.16476322 0.3308912 288681 595 649161 649162 1 302 Same - - 0.0000000 -24.182448373 0 3.856226e-01 270.0 1.487274 2.508439 0.9433207 4975 Putative glucose uptake permease [Carbohydrate transport and metabolism] G probable glucose uptake protein 2.230485 3.778732 1.0907554 4149 ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism] P molybdenum ABC transporter, permease - FALSE TRUE 155 TRUE 0.5353044 1.0562138 0.4120102 0.8514785 1.1946189 N 0.9519411 0.6042681 34.65656566 0.053111778 0.09398825 0.037481207 5.785116e-03 FALSE 0.5 5.785116e-03 FALSE 0.0073414541 0.6042681 0.11649306 0.3114251 288681 595 649162 649163 1 6 Same - - 152.4301555 484.969313905 0 8.705877e+02 2.0 2.230485 3.778732 1.0907554 4149 ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism] P molybdenum ABC transporter, permease 1.693030 2.728058 0.8690440 725 ABC-type molybdate transport system, periplasmic component [Inorganic ion transport and metabolism] P molybdenum ABC transporter, substrate-binding protein P FALSE TRUE 154 TRUE 4.0017569 4.2364016 4.2488290 0.8514785 3.9758328 Y 2.5887034 0.9948861 7.79292929 0.913984932 0.99288886 0.880624784 9.993264e-01 TRUE 0.5 9.993264e-01 TRUE 0.9896698059 0.9948861 0.90016046 0.9829419 288681 595 649166 649167 1 530 Same + + 0.0000000 -44.596644309 0 -1.312708e+00 NA 2.025865 3.388583 0.9612428 - - - integral membrane protein; transport protein, DMT superfamily 1.752461 2.784009 0.8795665 204 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] I 1-acylglycerol-3-phosphate O-acyltransferase (1-acyl-sn-glycerol-3-phosphate acyltransferase) TRUE TRUE 154 TRUE 0.5353044 0.4866983 0.3703397 0.8514785 0.6429928 U 0.6519531 0.5787966 38.48484848 0.011841869 0.01666018 0.008251023 2.029933e-04 FALSE 0.5 2.029933e-04 FALSE 0.0007281131 0.5787966 0.05731745 0.2892743 288681 595 649167 649168 1 475 Same + + 2.4277482 -46.902279046 0 -4.417576e+00 327.1 1.752461 2.784009 0.8795665 204 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] I 1-acylglycerol-3-phosphate O-acyltransferase (1-acyl-sn-glycerol-3-phosphate acyltransferase) 2.068123 3.330852 0.9507591 1609 Transcriptional regulators [Transcription] K periplasmic-binding protein/LacI transcriptional regulator - TRUE TRUE 155 TRUE 2.8195093 0.5248444 0.3665164 0.8514785 1.0724158 N 0.9519411 0.8887348 37.95959596 0.014638497 0.82679937 0.010208382 6.622099e-02 FALSE 0.5 6.622099e-02 FALSE 0.0347324315 0.8887348 0.70777915 0.7028980 288681 595 649168 649169 1 150 Same + + 0.0000000 0.176304263 0 1.763043e-01 NA 2.068123 3.330852 0.9507591 1609 Transcriptional regulators [Transcription] K periplasmic-binding protein/LacI transcriptional regulator 2.202899 3.558916 0.9354189 - - - group-specific protein TRUE TRUE 156 TRUE 0.5353044 0.4953197 0.6815353 0.8514785 0.6429928 U 0.6519531 0.6191127 27.03535354 0.403371088 0.14888298 0.319434907 1.057576e-01 FALSE 0.5 1.057576e-01 FALSE 0.1069352738 0.6191127 0.15046010 0.3249835 288681 595 649169 649170 1 119 Same + + 0.0000000 0.176304263 0 1.763043e-01 NA 2.202899 3.558916 0.9354189 - - - group-specific protein 1.666704 2.773897 0.9387888 1284 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein TRUE TRUE 157 TRUE 0.5353044 0.4953197 0.6815353 0.8514785 0.6429928 U 0.6519531 0.6191127 24.13131313 0.452867000 0.14888298 0.364931082 1.264761e-01 FALSE 0.5 1.264761e-01 FALSE 0.1278514882 0.6191127 0.15046010 0.3249835 288681 595 649170 649171 1 138 Same + + 0.0000000 -2.415884223 0 -2.415884e+00 NA 1.666704 2.773897 0.9387888 1284 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein 2.128266 3.330634 0.9623470 5294 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein TRUE TRUE 158 TRUE 0.5353044 0.5001377 0.4996169 0.8514785 0.6429928 U 0.6519531 0.5950569 26.06565657 0.419206064 0.05854841 0.333818440 4.295890e-02 FALSE 0.5 4.295890e-02 FALSE 0.0706019122 0.5950569 0.09522477 0.3032570 288681 595 649171 649172 1 743 Same + + 0.0000000 -42.965453197 0 3.184833e-01 NA 2.128266 3.330634 0.9623470 5294 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein 2.059643 3.275319 0.8746448 84 Mg-dependent DNase [DNA replication, recombination, and repair] L TatD-related deoxyribonuclease TRUE TRUE 159 TRUE 0.5353044 0.8506613 0.3737205 0.8514785 0.6429928 U 0.6519531 0.5548314 39.55050505 0.007691043 0.01666018 0.005352048 1.312978e-04 FALSE 0.5 1.312978e-04 FALSE 0.0001718253 0.5548314 0.02169197 0.2696232 288681 595 649172 649173 1 97 Same + + 0.0000000 0.050158594 0 5.015859e-02 NA 2.059643 3.275319 0.8746448 84 Mg-dependent DNase [DNA replication, recombination, and repair] L TatD-related deoxyribonuclease 1.774950 2.850739 0.8554566 - - - conserved hypothetical protein TRUE TRUE 160 TRUE 0.5353044 0.4560513 0.5040362 0.8514785 0.6429928 U 0.6519531 0.5985382 21.51010101 0.481770744 0.07207102 0.392246018 6.734212e-02 FALSE 0.5 6.734212e-02 FALSE 0.0967171681 0.5985382 0.10328041 0.3063226 288681 595 649177 649178 1 128 Same + + 0.0000000 0.080815588 0 8.081559e-02 NA 1.907065 3.104173 0.9871192 - - - group-specific protein 1.995011 3.147813 0.9370553 488 ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] R ABC transporter, ATP-binding protein TRUE TRUE 161 TRUE 0.5353044 0.4617345 0.5159451 0.8514785 0.6429928 U 0.6519531 0.5997305 25.04040404 0.439511809 0.07666583 0.352498405 6.112975e-02 FALSE 0.5 6.112975e-02 FALSE 0.0850952500 0.5997305 0.10603426 0.3073784 288681 595 649178 649179 1 1367 Same + + 0.0000000 -34.167775849 0 -7.743511e+00 327.1 1.995011 3.147813 0.9370553 488 ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] R ABC transporter, ATP-binding protein 1.556157 2.511813 0.8443894 747 ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism] E oligopeptide ABC transporter, oligopeptide-binding protein TRUE TRUE 162 TRUE 0.5353044 0.5403097 0.3921894 0.8514785 1.0724158 U 0.6519531 0.6063084 40.22222222 0.005828063 0.10169238 0.004053322 6.631900e-04 FALSE 0.5 6.631900e-04 FALSE 0.0008077168 0.6063084 0.12118400 0.3132593 288681 595 649179 649180 1 109 Same + + 10.7147596 8.853741003 0 3.187005e+01 200.0 1.556157 2.511813 0.8443894 747 ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism] E oligopeptide ABC transporter, oligopeptide-binding protein 1.773807 2.922407 0.8983798 601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transporter, permease E TRUE TRUE 163 TRUE 3.5398696 2.7136339 2.5725786 0.8514785 1.6052993 Y 2.5887034 0.9782988 22.98484848 0.463603583 0.96931159 0.375011817 9.646633e-01 TRUE 0.5 9.646633e-01 TRUE 0.8536931448 0.9782988 0.87098648 0.9303256 288681 595 649180 649181 1 13 Same + + 11.3850921 8.203912364 0 3.543123e+01 200.0 1.773807 2.922407 0.8983798 601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transporter, permease 2.142944 3.528109 1.0240232 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transporter, permease EP TRUE TRUE 164 TRUE 3.5746261 2.7758650 2.5331076 0.8514785 1.6052993 Y 2.5887034 0.9779833 9.23232323 0.901297905 0.96885532 0.863750725 9.964920e-01 TRUE 0.5 9.964920e-01 TRUE 0.9839597147 0.9779833 0.87042840 0.9293629 288681 595 649181 649182 1 11 Same + + 1.6247054 7.527809283 0 1.353765e+01 327.1 2.142944 3.528109 1.0240232 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transporter, permease 1.859357 2.979404 0.9124322 444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transporter, ATP-binding protein EP TRUE TRUE 165 TRUE 2.5892116 2.2427377 2.5084128 0.8514785 1.0724158 Y 2.5887034 0.9570935 8.50505051 0.908735069 0.93798007 0.873620349 9.934033e-01 TRUE 0.5 9.934033e-01 TRUE 0.9802939269 0.9570935 0.83322229 0.8685423 288681 595 649182 649183 1 -3 Same + + 4.9975501 8.973666983 0 1.806689e+01 9.0 1.859357 2.979404 0.9124322 444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP oligopeptide ABC transporter, ATP-binding protein 1.873770 3.006577 0.9397516 4608 ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] E oligopeptide ABC transporter, ATP-binding protein E TRUE TRUE 166 TRUE 3.1604965 2.4112623 2.5788522 0.8514785 3.2010728 Y 2.5887034 0.9831727 4.11111111 0.911770020 0.97632190 0.877665818 9.976586e-01 TRUE 0.5 9.976586e-01 TRUE 0.9869265386 0.9831727 0.87959180 0.9453722 288681 595 649185 649186 1 67 Same + + 8.0503845 3.371638249 0 9.402604e+00 327.1 1.588215 2.550545 0.8678241 3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only] ER 4-hydroxyphenylpyruvate dioxygenase 1.830092 2.951124 0.9471054 179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Q fumarylacetoacetase (fumarylacetoacetate hydrolase) - TRUE TRUE 167 TRUE 3.4034605 2.0784041 2.0204371 0.8514785 1.0724158 N 0.9519411 0.9506930 18.15656566 0.559803760 0.92824847 0.468898729 9.427005e-01 TRUE 0.5 9.427005e-01 TRUE 0.8542589536 0.9506930 0.82171897 0.8509888 288681 595 649186 649187 1 -34 Same + + 5.7990927 11.051770802 0 1.641357e+01 327.1 1.830092 2.951124 0.9471054 179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Q fumarylacetoacetase (fumarylacetoacetate hydrolase) 1.737191 2.790059 0.8824232 3508 Homogentisate 1,2-dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q homogentisate 1,2-dioxygenase Q TRUE TRUE 168 TRUE 3.2399914 2.3648648 2.6742951 0.8514785 1.0724158 Y 2.5887034 0.9736314 0.53030303 0.859415759 0.96253252 0.809307128 9.936727e-01 TRUE 0.5 9.936727e-01 TRUE 0.9746305271 0.9736314 0.86271981 0.9162240 288681 595 649187 649188 1 234 Same + + 0.0000000 -14.658246177 0 -1.562898e+01 327.1 1.737191 2.790059 0.8824232 3508 Homogentisate 1,2-dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q homogentisate 1,2-dioxygenase 2.234854 3.719944 1.0190871 3104 Dipeptide/tripeptide permease [Amino acid transport and metabolism] E permease; probable multidrug resistance protein - TRUE TRUE 169 TRUE 0.5353044 0.5585011 0.4280261 0.8514785 1.0724158 N 0.9519411 0.6306185 31.93434343 0.137492375 0.18965328 0.099642143 3.596643e-02 FALSE 0.5 3.596643e-02 FALSE 0.0330438538 0.6306185 0.17652916 0.3358429 288681 595 649188 649189 1 234 Same + + 0.0000000 -15.412843135 0 -3.536515e+00 327.1 2.234854 3.719944 1.0190871 3104 Dipeptide/tripeptide permease [Amino acid transport and metabolism] E permease; probable multidrug resistance protein 1.425226 2.283349 0.8029492 1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] M D-alanine--D-alanine ligase - TRUE TRUE 170 TRUE 0.5353044 0.5166844 0.4258712 0.8514785 1.0724158 N 0.9519411 0.6330028 31.93434343 0.137492375 0.19791660 0.099642143 3.784625e-02 FALSE 0.5 3.784625e-02 FALSE 0.0342314376 0.6330028 0.18190346 0.3381329 288681 595 649189 649190 1 62 Same + + 10.7912264 7.227145986 0 1.420138e+01 20.0 1.425226 2.283349 0.8029492 1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] M D-alanine--D-alanine ligase 1.612992 2.617409 0.8830351 770 UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase (UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase) M TRUE TRUE 171 TRUE 3.5472004 2.2699437 2.4859363 0.8514785 2.8332734 Y 2.5887034 0.9855283 17.64646465 0.580673637 0.97968525 0.490153217 9.852467e-01 TRUE 0.5 9.852467e-01 TRUE 0.9132423796 0.9855283 0.88374101 0.9527653 288681 595 649190 649191 1 306 Same + + 5.6268214 -58.349559884 0 1.179757e+00 327.1 1.612992 2.617409 0.8830351 770 UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase (UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase) 1.434141 2.270006 0.8147456 513 Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] LKJ DEAD/DEAH box helicase - TRUE TRUE 172 TRUE 3.2275264 1.2476920 0.3624561 0.8514785 1.0724158 N 0.9519411 0.8964224 34.78787879 0.050570610 0.84014889 0.035659730 2.187178e-01 FALSE 0.5 2.187178e-01 FALSE 0.1216168267 0.8964224 0.72217639 0.7193711 288681 595 649191 649192 1 97 Same + + 0.0000000 -2.170985108 0 -7.836222e-01 327.1 1.434141 2.270006 0.8147456 513 Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] LKJ DEAD/DEAH box helicase 2.008530 3.188870 0.8724245 4294 UV damage repair endonuclease [DNA replication, recombination, and repair] L UV-endonuclease UvdE family L TRUE TRUE 173 TRUE 0.5353044 0.4817878 0.5024378 0.8514785 1.0724158 Y 2.5887034 0.7462924 21.51010101 0.481770744 0.52968703 0.392246018 5.114826e-01 TRUE 0.5 5.114826e-01 TRUE 0.4089714914 0.7462924 0.42671431 0.4656016 288681 595 649194 649195 1 94 Same + + 0.0000000 3.631957172 0 3.226492e+00 NA 1.839565 2.997672 0.9245174 736 Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism] I holo-[acyl-carrier protein] synthase 2.069656 3.266171 0.9622710 2834 Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane] M conserved hypothetical protein - TRUE TRUE 174 TRUE 0.5353044 1.5622418 2.0678549 0.8514785 0.6429928 N 0.9519411 0.7390950 21.19191919 0.483193432 0.51163490 0.393605129 4.948243e-01 FALSE 0.5 4.948243e-01 FALSE 0.3955648659 0.7390950 0.41175186 0.4562431 288681 595 649195 649196 1 119 Same + + 0.0000000 2.628145945 0 5.490837e+00 NA 2.069656 3.266171 0.9622710 2834 Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane] M conserved hypothetical protein 1.961637 3.212669 0.9453313 787 Alanine racemase [Cell envelope biogenesis, outer membrane] M alanine racemase M TRUE TRUE 175 TRUE 0.5353044 1.8406050 1.9212716 0.8514785 0.6429928 Y 2.5887034 0.7969511 24.13131313 0.452867000 0.64752251 0.364931082 6.032615e-01 TRUE 0.5 6.032615e-01 TRUE 0.4826598066 0.7969511 0.52989052 0.5375791 288681 595 649196 649197 1 310 Same + + 0.0000000 -33.524925144 0 9.759011e+00 NA 1.961637 3.212669 0.9453313 787 Alanine racemase [Cell envelope biogenesis, outer membrane] M alanine racemase 2.126903 3.368733 1.0018274 864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain [Transcription] K conserved hypothetical protein - TRUE TRUE 176 TRUE 0.5353044 2.1043063 0.3934199 0.8514785 0.6429928 N 0.9519411 0.4941925 34.94949495 0.047606106 0.01666018 0.033538441 8.461638e-04 FALSE 0.5 8.461638e-04 FALSE 0.0011071041 0.4941925 0.02169197 0.2244399 288681 595 649197 649198 1 5 Same + + 11.9840985 13.460113525 0 2.696404e+01 NA 2.126903 3.368733 1.0018274 864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain [Transcription] K conserved hypothetical protein 2.081165 3.309970 1.0334540 2337 Growth inhibitor [Signal transduction mechanisms] T pemK-like protein - TRUE TRUE 177 TRUE 3.5971832 2.6265190 2.7987342 0.8514785 0.6429928 N 0.9519411 0.9627272 7.53535354 0.915321646 0.94643866 0.882413231 9.947918e-01 TRUE 0.5 9.947918e-01 TRUE 0.9831010128 0.9627272 0.84330701 0.8843986 288681 595 649198 649199 1 62 Same + + 2.3978953 -23.582362507 0 -2.742893e+01 327.1 2.081165 3.309970 1.0334540 2337 Growth inhibitor [Signal transduction mechanisms] T pemK-like protein 1.851861 2.911159 0.9049541 2183 Transcriptional accessory protein [Transcription] K probable transcription accessory protein, S1 RNA-binding domain - TRUE TRUE 178 TRUE 2.8001154 0.5685255 0.4128461 0.8514785 1.0724158 N 0.9519411 0.8887454 17.64646465 0.580673637 0.82681795 0.490153217 8.686164e-01 TRUE 0.5 8.686164e-01 TRUE 0.7703445803 0.8887454 0.70779907 0.7029204 288681 595 649199 649200 1 371 Same + + 8.4886413 -19.357561335 0 9.485170e+01 NA 1.851861 2.911159 0.9049541 2183 Transcriptional accessory protein [Transcription] K probable transcription accessory protein, S1 RNA-binding domain 2.232172 3.464348 0.9301900 3091 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein; possible zinc metallopeptidase TRUE TRUE 179 TRUE 3.4276676 3.2986853 0.4188342 0.8514785 0.6429928 U 0.6519531 0.8264450 36.39393939 0.027443737 0.70947359 0.019213880 6.446711e-02 FALSE 0.5 6.446711e-02 FALSE 0.0387578936 0.8264450 0.58828934 0.5851357 288681 595 649200 595368 1 1338 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.232172 3.464348 0.9301900 3091 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein; possible zinc metallopeptidase NA NA NA TRUE TRUE 180 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 40.21212121 0.005852714 0.10149799 0.004070497 6.645938e-04 FALSE 0.5 6.645938e-04 FALSE 0.0008102477 0.6062567 0.12106533 0.3132127 288681 595 595368 595369 1 176 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 181 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 28.86868687 0.315507567 0.10149799 0.242425673 4.949203e-02 FALSE 0.5 4.949203e-02 FALSE 0.0596995401 0.6062567 0.12106533 0.3132127 288681 595 595369 595370 1 49 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 182 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 16.40404040 0.658098248 0.10149799 0.571971466 1.786004e-01 FALSE 0.5 1.786004e-01 FALSE 0.2095650107 0.6062567 0.12106533 0.3132127 288681 595 595370 649217 1 340 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 1.853199 2.957133 0.9220128 802 Predicted ATPase or kinase [General function prediction only] R conserved hypothetical protein; uncharacterised P-loop hydrolase TRUE TRUE 183 TRUE 0.5353044 0.4703693 0.5700735 0.8514785 0.6429928 U 0.6519531 0.6062567 35.71717172 0.035686087 0.10149799 0.025048164 4.163007e-03 FALSE 0.5 4.163007e-03 FALSE 0.0050714901 0.6062567 0.12106533 0.3132127 288681 595 649217 649218 1 -19 Same + + 32.8159222 24.093615011 0 7.604007e+01 NA 1.853199 2.957133 0.9220128 802 Predicted ATPase or kinase [General function prediction only] R conserved hypothetical protein; uncharacterised P-loop hydrolase 1.618914 2.614802 0.8870197 1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] O probable O-sialoglycoprotein endopeptidase (glycoprotease) TRUE TRUE 184 TRUE 3.9153809 3.1821511 3.1851453 0.8514785 0.6429928 U 0.6519531 0.9689633 1.25252525 0.876125243 0.95568711 0.830799832 9.934868e-01 TRUE 0.5 9.934868e-01 TRUE 0.9764773152 0.9689633 0.85442636 0.9024115 288681 595 649218 649219 1 14 Same + + 37.3783747 52.102947167 0 1.739531e+02 327.1 1.618914 2.614802 0.8870197 1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] O probable O-sialoglycoprotein endopeptidase (glycoprotease) 1.999611 3.210877 0.9283544 456 Acetyltransferases [General function prediction only] R ribosomal-protein-alanine N-acetyltransferase TRUE TRUE 185 TRUE 3.9438977 3.6921546 3.6174847 0.8514785 1.0724158 U 0.6519531 0.9752657 9.75757576 0.894857333 0.96491360 0.855253573 9.957457e-01 TRUE 0.5 9.957457e-01 TRUE 0.9820860162 0.9752657 0.86561729 0.9211281 288681 595 649219 649220 1 -15 Same + + 34.0685271 24.196931045 0 1.693148e+02 327.1 1.999611 3.210