Taxon Scaffold Gene1 Gene2 Consecutive Sep Code Strand1 Strand2 GNScore GNWithin GNAll GNMinus GOScore CAI CAI.Alm CBI COG COGanno COGfun Description nCAI nCAI.Alm nCBI nCOG nCOGanno nCOGfun nDescription COGsim forward forwardplus sumBias same bbfGNScore bbfGNMinus bbfGNWithin bbfGNAll bbfGOScore COGsimClass cfCOG pSame groupIndexD pSameD pOpLogistic pOpDistance pOp1 bOp1 pCAI pOp bOp pOp2 pSame pOpLogisticLike pOpLogisticM 320372 3990 1064117 1064118 1 182 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA NA NA NA NA NA NA TRUE FALSE -1 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 30.96938776 0.372284641 0.01536016 0.249311503 0.0091670793 FALSE 0.5 0.0091670793 FALSE 0.0129796190 0.4537101 0.02169197 0.2250694 320372 3990 1064118 1064119 1 354 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA NA NA NA NA NA NA TRUE FALSE -2 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 35.28571429 0.094934846 0.01536016 0.055478878 0.0016336309 FALSE 0.5 0.0016336309 FALSE 0.0023203867 0.4537101 0.02169197 0.2250694 320372 3990 1064119 1064120 1 35 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA NA NA NA NA NA NA TRUE FALSE -3 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 17.56122449 0.711729226 0.01536016 0.580283611 0.0370868131 FALSE 0.5 0.0370868131 FALSE 0.0519027684 0.4537101 0.02169197 0.2250694 320372 3990 1064120 1064121 1 83 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA NA NA NA NA NA NA TRUE FALSE -4 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 24.20918367 0.652437783 0.01536016 0.512475542 0.0284504854 FALSE 0.5 0.0284504854 FALSE 0.0399594569 0.4537101 0.02169197 0.2250694 320372 3990 1064121 1064122 1 549 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA NA NA NA 2.084822 2.814855 0.8899598 2755 Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] E lipase/acylhydrolase, putative TRUE FALSE -5 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 37.60204082 0.035555704 0.01536016 0.020226832 0.0005747787 FALSE 0.5 0.0005747787 FALSE 0.0008167718 0.4537101 0.02169197 0.2250694 320372 3990 1064123 1064124 1 -597 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.616814 2.142631 0.7613951 3396 Uncharacterized conserved protein [Function unknown] S phenylacetate-CoA oxygenase, PaaG subunit 4.818030 6.324933 1.1174200 3460 Uncharacterized enzyme of phenylacetate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Q phenylacetic acid degradation protein PaaB FALSE FALSE -5 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 1.92857143 0.094828671 0.01536016 0.055414129 0.0016316158 FALSE 0.5 0.0016316158 FALSE 0.0023175263 0.4537101 0.02169197 0.2250694 320372 3990 1064124 1064125 1 11 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 4.818030 6.324933 1.1174200 3460 Uncharacterized enzyme of phenylacetate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Q phenylacetic acid degradation protein PaaB 1.539548 2.095602 0.7568389 3396 Uncharacterized conserved protein [Function unknown] S phenylacetate-CoA oxygenase, PaaI subunit FALSE FALSE -4 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 12.37244898 0.815295537 0.01536016 0.711962396 0.0644222317 FALSE 0.5 0.0644222317 FALSE 0.0891475040 0.4537101 0.02169197 0.2250694 320372 3990 1064125 1064126 1 36 Same + + 29.34260556 1.081644e+01 0 1.920498e+02 NA 1.539548 2.095602 0.7568389 3396 Uncharacterized conserved protein [Function unknown] S phenylacetate-CoA oxygenase, PaaI subunit 1.745848 2.309345 0.7885972 2151 Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only] R phenylacetic acid degradation protein PaaD FALSE FALSE -3 TRUE 3.379712330 2.9750453288 2.3613808827 0.4706616 0.1969412 U 0.2044969 0.9532748 17.78061224 0.708193672 0.94968629 0.576096102 0.9786366025 TRUE 0.5 0.9786366025 TRUE 0.9331045078 0.9532748 0.85179612 0.8770673 320372 3990 1064126 1064127 1 2 Same + + 17.43041398 1.000371e+01 0 1.384800e+02 NA 1.745848 2.309345 0.7885972 2151 Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only] R phenylacetic acid degradation protein PaaD 1.394624 1.882700 0.6884111 1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] C phenylacetate-CoA oxygenase/reductase, PaaK subunit FALSE FALSE -2 TRUE 2.785570839 2.8221306844 2.3258416325 0.4706616 0.1969412 U 0.2044969 0.9363176 10.06632653 0.867144002 0.93018487 0.785174459 0.9886314618 TRUE 0.5 0.9886314618 TRUE 0.9696071196 0.9363176 0.83015742 0.8371773 320372 3990 1064127 1064128 1 122 Same + + 0.00000000 -2.052986e-01 0 -7.307230e-01 NA 1.394624 1.882700 0.6884111 1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] C phenylacetate-CoA oxygenase/reductase, PaaK subunit 1.650254 2.256292 0.8071525 - - - hypothetical protein FALSE FALSE -1 TRUE 0.130730784 -0.0255409501 -0.1296255906 0.4706616 0.1969412 U 0.2044969 0.4513181 27.71428571 0.587756290 0.01536016 0.443946148 0.0217574499 FALSE 0.5 0.0217574499 FALSE 0.0306443116 0.4513181 0.02169197 0.2233899 320372 3990 1064128 1064129 1 27 Same + + 0.00000000 -3.650612e-02 0 -5.619305e-01 NA 1.650254 2.256292 0.8071525 - - - hypothetical protein 1.538583 2.071451 0.7901991 1309 Transcriptional regulator [Transcription] K transcriptional regulator, TetR family FALSE FALSE 0 TRUE 0.130730784 -0.0326768460 -0.1316105423 0.4706616 0.1969412 U 0.2044969 0.4509449 16.32142857 0.735431641 0.01536016 0.608854180 0.0415611002 FALSE 0.5 0.0415611002 FALSE 0.0580567354 0.4509449 0.02169197 0.2231286 320372 3990 1064129 1064130 1 122 Same + + 0.00000000 -1.466004e+00 0 -1.466004e+00 376.7 1.538583 2.071451 0.7901991 1309 Transcriptional regulator [Transcription] K transcriptional regulator, TetR family 2.001059 2.738607 0.8659564 - - - acetyltransferase, GNAT family FALSE FALSE 1 TRUE 0.130730784 -0.0005644741 -0.1121534128 0.4706616 0.7873368 U 0.2044969 0.5066630 27.71428571 0.587756290 0.01536016 0.443946148 0.0217574499 FALSE 0.5 0.0217574499 FALSE 0.0920187219 0.5066630 0.06636416 0.2642452 320372 3990 1064136 1064137 1 302 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 2.391299 3.149043 0.9120972 461 Orotate phosphoribosyltransferase [Nucleotide transport and metabolism] F orotate phosphoribosyltransferase 1.855757 2.462405 0.8561199 1881 Phospholipid-binding protein [General function prediction only] R Phosphatidylethanolamine-binding protein FALSE FALSE 2 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 34.25510204 0.139812245 0.01536016 0.083423932 0.0025291255 FALSE 0.5 0.0025291255 FALSE 0.0035909806 0.4537101 0.02169197 0.2250694 320372 3990 1064137 1064138 1 168 Same + + 0.00000000 3.893996e-01 0 1.861714e-01 NA 1.855757 2.462405 0.8561199 1881 Phospholipid-binding protein [General function prediction only] R Phosphatidylethanolamine-binding protein 2.276765 3.010367 0.8785332 655 Multimeric flavodoxin WrbA [General function prediction only] R flavodoxin domain protein FALSE FALSE 3 TRUE 0.130730784 0.1871603115 0.6807903114 0.4706616 0.1969412 U 0.2044969 0.5686383 30.35714286 0.423006729 0.22132000 0.291047492 0.1724398864 FALSE 0.5 0.1724398864 FALSE 0.1633815081 0.5686383 0.21034657 0.3155334 320372 3990 1064138 1064139 1 153 Same + + 0.00000000 1.881270e-01 0 1.881270e-01 376.7 2.276765 3.010367 0.8785332 655 Multimeric flavodoxin WrbA [General function prediction only] R flavodoxin domain protein 1.383445 1.854403 0.6699880 2 Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] E N-acetyl-gamma-glutamyl-phosphate reductase FALSE FALSE 4 TRUE 0.130730784 0.2008114848 0.4597618933 0.4706616 0.7873368 U 0.2044969 0.5895785 29.60714286 0.476972003 0.28543450 0.338040925 0.2670113054 FALSE 0.5 0.2670113054 FALSE 0.2385423401 0.5895785 0.25568644 0.3343780 320372 3990 1064139 1064140 1 475 Same + + 0.00000000 -9.164930e+01 0 1.983305e+00 NA 1.383445 1.854403 0.6699880 2 Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] E N-acetyl-gamma-glutamyl-phosphate reductase 1.551867 2.039669 0.6983338 - - - putative lipoprotein FALSE FALSE 5 TRUE 0.130730784 0.8694537141 0.3039954854 0.4706616 0.1969412 U 0.2044969 0.5246217 36.88775510 0.048926535 0.06986364 0.028000553 0.0038491082 FALSE 0.5 0.0038491082 FALSE 0.0062973350 0.5246217 0.10967744 0.2784614 320372 3990 1064140 1064141 1 127 Same + + 0.00000000 1.966379e+00 0 1.966379e+00 NA 1.551867 2.039669 0.6983338 - - - putative lipoprotein 1.337304 1.753872 0.6135586 - - - putative lipoprotein FALSE FALSE 6 TRUE 0.130730784 0.8632673456 1.3073815169 0.4706616 0.1969412 U 0.2044969 0.6610949 28.00510204 0.573661499 0.47377937 0.429705280 0.5478102417 TRUE 0.5 0.5478102417 TRUE 0.4722814697 0.6610949 0.39944125 0.4055250 320372 3990 1064141 1064142 1 20 Same + + 0.00000000 3.838620e+00 0 3.838620e+00 NA 1.337304 1.753872 0.6135586 - - - putative lipoprotein 1.609325 2.167966 0.7751529 3047 Outer membrane protein W [Cell envelope biogenesis, outer membrane] M outer membrane protein, OmpW family FALSE FALSE 7 TRUE 0.130730784 1.2545127373 1.7861414921 0.4706616 0.1969412 U 0.2044969 0.7233086 14.83163265 0.764134430 0.60733189 0.644654083 0.8336323474 TRUE 0.5 0.8336323474 TRUE 0.7727718281 0.7233086 0.51213448 0.4775800 320372 3990 1064145 1064146 1 99 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 376.7 1.665869 2.264498 0.8109425 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E transporter, LysE family 2.174413 2.956771 0.9279712 2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] I dehydrogenase - TRUE FALSE 7 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.7873368 N 0.6473008 0.5536442 25.91836735 0.633391536 0.17243130 0.491734448 0.2646966142 FALSE 0.5 0.2646966142 FALSE 0.2707673945 0.5536442 0.17689507 0.3025324 320372 3990 1064149 1064150 1 172 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 3.045494 3.879236 0.9979746 - - - hypothetical protein 1.993456 2.699099 0.9551719 - - - hypothetical protein FALSE FALSE 7 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 30.52040816 0.410125120 0.01536016 0.280232681 0.0107297502 FALSE 0.5 0.0107297502 FALSE 0.0151822381 0.4537101 0.02169197 0.2250694 320372 3990 1064153 1064154 1 65 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA NA NA NA 3.006114 3.893956 1.0564875 4654 Cytochrome c551/c552 [Energy production and conversion] C cytochrome c family protein TRUE FALSE 7 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 22.23979592 0.654371698 0.01536016 0.514608852 0.0286874795 FALSE 0.5 0.0286874795 FALSE 0.0402883459 0.4537101 0.02169197 0.2250694 320372 3990 1064154 1064155 1 -324 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 3.006114 3.893956 1.0564875 4654 Cytochrome c551/c552 [Energy production and conversion] C cytochrome c family protein 1.678677 2.306231 0.7973233 2823 Predicted periplasmic or secreted lipoprotein [General function prediction only] R Putative phospholipid-binding domain family TRUE FALSE 6 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 2.38775510 0.148256615 0.01536016 0.088814207 0.0027079825 FALSE 0.5 0.0027079825 FALSE 0.0038446415 0.4537101 0.02169197 0.2250694 320372 3990 1064155 1064156 1 19 Same - - 2.74314152 1.508288e+01 0 1.872081e+01 NA 1.678677 2.306231 0.7973233 2823 Predicted periplasmic or secreted lipoprotein [General function prediction only] R Putative phospholipid-binding domain family 1.708476 2.344408 0.8790303 279 Phosphoheptose isomerase [Carbohydrate transport and metabolism] G phosphoheptose isomerase TRUE FALSE 5 TRUE 0.640785346 1.9578599296 2.5311139104 0.4706616 0.1969412 U 0.2044969 0.8426931 14.63775510 0.768063938 0.80838389 0.649661512 0.9332023635 TRUE 0.5 0.9332023635 TRUE 0.8862373455 0.8426931 0.70171109 0.6519747 320372 3990 1064156 1064157 1 123 Same - - 2.99387870 9.444656e+00 0 6.630215e+01 NA 1.708476 2.344408 0.8790303 279 Phosphoheptose isomerase [Carbohydrate transport and metabolism] G phosphoheptose isomerase 1.969826 2.623489 0.8589584 792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase [DNA replication, recombination, and repair] L hypothetical protein - TRUE FALSE 4 TRUE 0.729219481 2.5160038952 2.2891536173 0.4706616 0.1969412 N 0.6473008 0.8588230 27.78061224 0.584644846 0.83126166 0.440782001 0.8739633854 TRUE 0.5 0.8739633854 TRUE 0.7877194946 0.8588230 0.72499249 0.6802401 320372 3990 1064160 1064161 1 194 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.506517 2.029493 0.7565199 491 Zn-dependent hydrolases, including glyoxylases [General function prediction only] R metallo-beta-lactamase superfamily protein 7.430289 9.913793 1.2539645 - - - hypothetical protein FALSE FALSE 4 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 31.39285714 0.335147177 0.01536016 0.220139179 0.0078023680 FALSE 0.5 0.0078023680 FALSE 0.0110536633 0.4537101 0.02169197 0.2250694 320372 3990 1064161 1064162 1 -826 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 7.430289 9.913793 1.2539645 - - - hypothetical protein 1.557638 2.118638 0.8438611 1522 Transcriptional regulators [Transcription] K transcriptional regulator, AsnC family FALSE FALSE 5 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 1.46938776 0.057312468 0.01536016 0.032923967 0.0009475188 FALSE 0.5 0.0009475188 FALSE 0.0013462315 0.4537101 0.02169197 0.2250694 320372 3990 1064163 1064164 1 240 Same - - 0.00000000 -1.504283e+00 0 1.785489e+00 376.7 2.134776 3.002628 0.9521238 53 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] P cation efflux family protein 4.076108 5.360346 1.0755107 2916 DNA-binding protein H-NS [General function prediction only] R H-NS histone family protein TRUE FALSE 5 TRUE 0.130730784 0.8028530350 -0.1116402557 0.4706616 0.7873368 U 0.2044969 0.5174137 32.93877551 0.216389713 0.04260617 0.133925139 0.0121398633 FALSE 0.5 0.0121398633 FALSE 0.0273624099 0.5174137 0.09245588 0.2726954 320372 3990 1064164 1064165 1 301 Same - - 0.00000000 -5.179866e+01 0 -7.013607e-01 376.7 4.076108 5.360346 1.0755107 2916 DNA-binding protein H-NS [General function prediction only] R H-NS histone family protein 2.189837 3.013838 0.9140516 - - - Pyridoxamine 5'-phosphate oxidase family TRUE FALSE 4 TRUE 0.130730784 -0.0276382490 0.1249678836 0.4706616 0.7873368 U 0.2044969 0.5398906 34.23469388 0.140846622 0.12519978 0.084081909 0.0229244320 FALSE 0.5 0.0229244320 FALSE 0.0271471065 0.5398906 0.14545698 0.2909508 320372 3990 1064167 1064168 1 456 Same - - 0.00000000 -7.455394e+01 0 -1.066175e+01 NA 1.374324 1.803239 0.6350083 683 ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] E outative extracellular ligand binding protein 1.757870 2.393513 0.8243136 2070 Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only] R oxidoreductase, 2-nitropropane dioxygenase family TRUE FALSE 3 TRUE 0.130730784 0.1973147423 0.2298419436 0.4706616 0.1969412 U 0.2044969 0.5051728 36.62244898 0.054910675 0.01536016 0.031510060 0.0009055422 FALSE 0.5 0.0009055422 FALSE 0.0038721214 0.5051728 0.06270826 0.2630877 320372 3990 1064169 1064170 1 95 Same + + 0.00000000 1.130662e+00 0 -5.449569e-01 376.7 1.450118 1.894684 0.6893881 412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Q dienelactone hydrolase 1.460330 2.009310 0.7018858 154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] J 6-aminohexanoate-cyclic-dimer hydrolase - FALSE FALSE 3 TRUE 0.130730784 -0.0347020690 1.0363944432 0.4706616 0.7873368 N 0.6473008 0.7042423 25.46428571 0.640864910 0.56891032 0.499815127 0.7019344827 TRUE 0.5 0.7019344827 TRUE 0.6210316584 0.7042423 0.47871520 0.4543546 320372 3990 1064171 1064172 1 18 Same - - 1.13140211 5.750028e+00 0 6.038949e+00 NA 1.409342 1.881806 0.7012334 685 5,10-methylenetetrahydrofolate reductase [Amino acid transport and metabolism] E 5,10-methylenetetrahydrofolate reductase 1.513873 2.121620 0.8652615 1950 Predicted membrane protein [Function unknown] S YvlD TRUE FALSE 3 TRUE -0.124646527 1.4497185547 2.0381582893 0.4706616 0.1969412 U 0.2044969 0.7282656 14.37755102 0.773784363 0.61699147 0.656998063 0.8463950904 TRUE 0.5 0.8463950904 TRUE 0.7879360306 0.7282656 0.52066931 0.4837975 320372 3990 1064172 1064173 1 164 Same - - 1.13140211 5.750028e+00 0 5.438908e+00 NA 1.513873 2.121620 0.8652615 1950 Predicted membrane protein [Function unknown] S YvlD 1.268881 1.683699 0.5709276 499 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] H adenosylhomocysteinase TRUE FALSE 2 TRUE -0.124646527 1.3915225348 2.0381582893 0.4706616 0.1969412 U 0.2044969 0.7276525 30.11224490 0.441177881 0.61580394 0.306561828 0.5585779102 TRUE 0.5 0.5585779102 TRUE 0.4606132162 0.7276525 0.51961713 0.4830244 320372 3990 1064173 1064174 1 354 Same - - 0.00000000 -9.234999e+01 0 -1.728206e+01 376.7 1.268881 1.683699 0.5709276 499 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] H adenosylhomocysteinase 1.332448 1.868122 0.7230533 1191 DNA-directed RNA polymerase specialized sigma subunit [Transcription] K RNA polymerase sigma factor for flagellar operon FliA - TRUE FALSE 1 TRUE 0.130730784 0.2581092340 0.3072519188 0.4706616 0.7873368 N 0.6473008 0.6151454 35.28571429 0.094934846 0.35779669 0.055478878 0.0552132580 FALSE 0.5 0.0552132580 FALSE 0.0447992945 0.6151454 0.30897557 0.3585460 320372 3990 1064176 1064177 1 -7 Same - - 8.84802994 3.914460e+00 0 6.931238e+01 NA 1.533282 2.124419 0.7854553 455 ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] D flagellar biosynthesis protein FlhG 1.469632 2.014494 0.7028096 1419 Flagellar GTP-binding protein [Cell motility and secretion] N flagellar biosynthesis protein FlhF - TRUE FALSE 0 TRUE 1.972755438 2.5338185243 1.7936384930 0.4706616 0.1969412 N 0.6473008 0.8957966 5.16836735 0.649941769 0.88059403 0.509729695 0.9319382227 TRUE 0.5 0.9319382227 TRUE 0.8657826541 0.8957966 0.77650086 0.7503904 320372 3990 1064177 1064178 1 -3 Same - - 11.72230054 6.884383e+00 0 8.160925e+01 376.7 1.469632 2.014494 0.7028096 1419 Flagellar GTP-binding protein [Cell motility and secretion] N flagellar biosynthesis protein FlhF 1.357069 1.858077 0.6475794 1298 Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion] NU flagellar biosynthesis protein FlhA N TRUE FALSE -1 TRUE 2.302516002 2.6075581365 2.1383809449 0.4706616 0.7873368 Y 2.5451747 0.9719085 7.22959184 0.838434824 0.97033101 0.743981918 0.9941425311 TRUE 0.5 0.9941425311 TRUE 0.9732200420 0.9719085 0.87504572 0.9236582 320372 3990 1064178 1064179 1 -3 Same - - 69.60853179 1.452310e+01 0 3.060431e+02 62.0 1.357069 1.858077 0.6475794 1298 Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion] NU flagellar biosynthesis protein FlhA 1.807761 2.466218 0.8189973 1377 Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion] NU flagellar biosynthetic protein FlhB NU TRUE FALSE -2 TRUE 4.113830206 3.2115941624 2.4973047341 0.4706616 2.5195233 Y 2.5451747 0.9950845 7.22959184 0.838434824 0.99492935 0.743981918 0.9990188759 TRUE 0.5 0.9990188759 TRUE 0.9797697308 0.9950845 0.90321857 0.9860710 320372 3990 1064179 1064180 1 501 Same - - 0.00000000 -9.319969e+01 0 -1.452131e+01 NA 1.807761 2.466218 0.8189973 1377 Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion] NU flagellar biosynthetic protein FlhB 1.520546 2.026527 0.7953290 3865 Uncharacterized protein conserved in bacteria [Function unknown] S DNA binding protein TRUE FALSE -3 TRUE 0.130730784 0.2393474385 0.3086511893 0.4706616 0.1969412 U 0.2044969 0.5169167 37.23979592 0.041864070 0.04069871 0.023882866 0.0018502721 FALSE 0.5 0.0018502721 FALSE 0.0043687382 0.5169167 0.09126045 0.2723008 320372 3990 1064180 1064181 1 38 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.520546 2.026527 0.7953290 3865 Uncharacterized protein conserved in bacteria [Function unknown] S DNA binding protein 5.082362 6.836813 1.1224130 - - - hypothetical protein TRUE FALSE -4 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 18.13775510 0.702502370 0.01536016 0.569394940 0.0355281060 FALSE 0.5 0.0355281060 FALSE 0.0497535417 0.4537101 0.02169197 0.2250694 320372 3990 1064181 1064182 1 -1227 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 5.082362 6.836813 1.1224130 - - - hypothetical protein 1.545073 2.045368 0.7185574 - - - lipoprotein, putative TRUE FALSE -5 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 0.78571429 0.024781506 0.01536016 0.014030063 0.0003962523 FALSE 0.5 0.0003962523 FALSE 0.0005631247 0.4537101 0.02169197 0.2250694 320372 3990 1064184 1064185 1 198 Same - - 0.00000000 -3.103488e+00 0 2.532696e+00 NA 1.918380 2.578957 0.9178990 - - - hypothetical protein 1.681349 2.323299 0.8106091 3143 Chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] NT chemotaxis protein CheZ TRUE FALSE -6 TRUE 0.130730784 1.0241162429 -0.0951112614 0.4706616 0.1969412 U 0.2044969 0.4700596 31.53061224 0.323119740 0.01536016 0.210929621 0.0073917576 FALSE 0.5 0.0073917576 FALSE 0.0104737552 0.4700596 0.02169197 0.2367504 320372 3990 1064185 1064186 1 2 Same - - 0.00000000 3.149609e-03 0 3.149609e-03 376.7 1.681349 2.323299 0.8106091 3143 Chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] NT chemotaxis protein CheZ 2.037169 2.763721 0.9156379 784 FOG: CheY-like receiver [Signal transduction mechanisms] T chemotaxis protein CheY T TRUE FALSE -7 TRUE 0.130730784 -0.0117119765 0.1167928970 0.4706616 0.7873368 Y 2.5451747 0.7617509 10.06632653 0.867144002 0.67895058 0.785174459 0.9324465386 TRUE 0.5 0.9324465386 TRUE 0.8989221273 0.7617509 0.57673049 0.5278784 320372 3990 1064186 1064187 1 178 Same - - 0.00000000 -5.762051e+00 0 3.149609e-03 41.0 2.037169 2.763721 0.9156379 784 FOG: CheY-like receiver [Signal transduction mechanisms] T chemotaxis protein CheY 1.570806 2.147660 0.7550187 2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms] NT chemotaxis protein-glutamate methylesterase protein CheB T TRUE FALSE -8 TRUE 0.130730784 -0.0117119765 -0.0560729812 0.4706616 2.9172157 Y 2.5451747 0.8610923 30.75000000 0.391124207 0.83441145 0.264550701 0.7639811503 TRUE 0.5 0.7639811503 TRUE 0.6325236416 0.8610923 0.72822741 0.6843247 320372 3990 1064187 1064188 1 6 Same - - 9.18718964 5.859338e+00 0 4.115540e+01 NA 1.570806 2.147660 0.7550187 2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms] NT chemotaxis protein-glutamate methylesterase protein CheB 1.582664 2.109254 0.7778391 1871 Chemotaxis protein; stimulates methylation of MCP proteins [Cell motility and secretion / Signal transduction mechanisms] NT chemotaxis protein CheD NT TRUE FALSE -9 TRUE 2.030694443 2.3347894313 2.0521442330 0.4706616 0.1969412 Y 2.5451747 0.9582194 11.39795918 0.841227091 0.95524281 0.747915781 0.9912342626 TRUE 0.5 0.9912342626 TRUE 0.9697140738 0.9582194 0.85801881 0.8891386 320372 3990 1064188 1064189 1 -3 Same - - 9.18718964 6.058336e+00 0 4.504361e+01 NA 1.582664 2.109254 0.7778391 1871 Chemotaxis protein; stimulates methylation of MCP proteins [Cell motility and secretion / Signal transduction mechanisms] NT chemotaxis protein CheD 1.495832 2.016912 0.7575979 1352 Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] NT chemotaxis protein methyltransferase NT TRUE FALSE -10 TRUE 2.030694443 2.3673356145 2.0708633624 0.4706616 0.1969412 Y 2.5451747 0.9587116 7.22959184 0.838434824 0.95579279 0.743981918 0.9911660638 TRUE 0.5 0.9911660638 TRUE 0.9692501043 0.9587116 0.85863611 0.8903515 320372 3990 1064189 1064190 1 7 Same - - 1.49923477 2.731542e+00 0 2.764733e+00 76.0 1.495832 2.016912 0.7575979 1352 Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] NT chemotaxis protein methyltransferase 1.506202 2.030774 0.7113090 840 Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] NT methyl-accepting chemotaxis protein I NT TRUE FALSE -11 TRUE 0.078471368 1.0716909042 1.5425680131 0.4706616 2.3648734 Y 2.5451747 0.9286803 11.59693878 0.834806315 0.92116908 0.738892750 0.9833477816 TRUE 0.5 0.9833477816 TRUE 0.9584402935 0.9286803 0.82025780 0.8199368 320372 3990 1064192 1064193 1 31 Same - - 25.04597526 8.226564e+00 0 1.809823e+02 76.0 1.396481 1.908494 0.7550145 835 Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms] NT chemotaxis protein CheW 1.433191 1.955178 0.6820665 643 Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] NT chemotaxis protein CheA NT TRUE FALSE -12 TRUE 3.206898315 2.9595779786 2.2124623856 0.4706616 2.3648734 Y 2.5451747 0.9902745 16.84183673 0.724851386 0.98991882 0.595992759 0.9961491694 TRUE 0.5 0.9961491694 TRUE 0.9584225021 0.9902745 0.89743779 0.9726831 320372 3990 1064193 1064194 1 32 Same - - 23.02341061 1.078499e+01 0 1.223332e+02 84.0 1.433191 1.955178 0.6820665 643 Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] NT chemotaxis protein CheA 1.726173 2.421958 0.9445030 784 FOG: CheY-like receiver [Signal transduction mechanisms] T chemotaxis two-component response regulator CheY1 T TRUE FALSE -13 TRUE 3.122072477 2.7658119942 2.3599543788 0.4706616 2.3024480 Y 2.5451747 0.9903556 17.00510204 0.721662212 0.99000378 0.592150399 0.9961207370 TRUE 0.5 0.9961207370 TRUE 0.9578258873 0.9903556 0.89753563 0.9729071 320372 3990 1064194 1064195 1 31 Same - - 1.13140211 -2.954198e-01 0 -4.385633e+00 376.7 1.726173 2.421958 0.9445030 784 FOG: CheY-like receiver [Signal transduction mechanisms] T chemotaxis two-component response regulator CheY1 1.415949 1.888413 0.6992299 1360 Flagellar motor protein [Cell motility and secretion] N MotB - TRUE FALSE -14 TRUE -0.124646527 0.0796468190 -0.1284467874 0.4706616 0.7873368 N 0.6473008 0.5208353 16.84183673 0.724851386 0.05563909 0.595992759 0.1343575935 FALSE 0.5 0.1343575935 FALSE 0.2277107868 0.5208353 0.10065770 0.2754222 320372 3990 1064195 1064196 1 17 Same - - 54.92146905 1.625585e+01 0 2.681815e+02 376.7 1.415949 1.888413 0.6992299 1360 Flagellar motor protein [Cell motility and secretion] N MotB 1.328384 1.817913 0.6866132 1291 Flagellar motor component [Cell motility and secretion] N chemotaxis MotA protein N TRUE FALSE -15 TRUE 3.955163904 3.1318129201 2.6038629797 0.4706616 0.7873368 Y 2.5451747 0.9907007 14.08163265 0.780669164 0.99036481 0.665902552 0.9972740841 TRUE 0.5 0.9972740841 TRUE 0.9690588281 0.9907007 0.89795146 0.9738600 320372 3990 1064196 1064197 1 194 Same - - 3.15735497 3.284038e+00 0 9.787431e+01 376.7 1.328384 1.817913 0.6866132 1291 Flagellar motor component [Cell motility and secretion] N chemotaxis MotA protein 1.637529 2.204471 0.8250924 - - - flagellar transcriptional activator FlhC TRUE FALSE -16 TRUE 0.760130803 2.6805687407 1.7046711142 0.4706616 0.7873368 U 0.2044969 0.8202841 31.39285714 0.335147177 0.77510705 0.220139179 0.6346877546 TRUE 0.5 0.6346877546 TRUE 0.5041109264 0.8202841 0.66850696 0.6148156 320372 3990 1064197 1064198 1 94 Same - - 0.00000000 1.273903e-02 0 1.273903e-02 5.0 1.637529 2.204471 0.8250924 - - - flagellar transcriptional activator FlhC 3.270494 4.393374 1.0515269 - - - FlhD TRUE FALSE -17 TRUE 0.130730784 0.0439848037 0.1777641473 0.4706616 3.8403214 U 0.2044969 0.7830436 25.38265306 0.642367282 0.71559315 0.501448529 0.8188179893 TRUE 0.5 0.8188179893 TRUE 0.7383008941 0.7830436 0.61099638 0.5579432 320372 3990 1064202 1064203 1 97 Same - - 0.00000000 7.860332e-01 0 -5.823845e-01 NA 1.880005 2.561054 0.8551713 561 Predicted hydrolases of the HAD superfamily [General function prediction only] R Cof-like hydrolase 1.716097 2.317086 0.7665148 2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism] G BadF/BadG/BcrA/BcrD ATPase family superfamily TRUE FALSE -18 TRUE 0.130730784 -0.0324505308 0.9037769449 0.4706616 0.1969412 U 0.2044969 0.5965897 25.66326531 0.637450256 0.30589565 0.496113826 0.4365775339 FALSE 0.5 0.4365775339 FALSE 0.3946838833 0.5965897 0.27052112 0.3408749 320372 3990 1064206 1064207 1 44 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.977541 2.635152 0.8403175 1344 Flagellin and related hook-associated proteins [Cell motility and secretion] N flagellin 4.881600 6.428343 0.9764275 - - - hypothetical protein FALSE FALSE -18 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 19.20918367 0.685959147 0.01536016 0.550189263 0.0329517469 FALSE 0.5 0.0329517469 FALSE 0.0461950187 0.4537101 0.02169197 0.2250694 320372 3990 1064207 1064208 1 -1567 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 4.881600 6.428343 0.9764275 - - - hypothetical protein 1.505242 2.043966 0.7356415 1345 Flagellar capping protein [Cell motility and secretion] N flagellar hook-associated protein FALSE FALSE -17 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 0.38775510 0.014604296 0.01536016 0.008230964 0.0002311467 FALSE 0.5 0.0002311467 FALSE 0.0003285116 0.4537101 0.02169197 0.2250694 320372 3990 1064208 1064209 1 14 Same + + 0.00000000 2.831197e+00 0 2.831197e+00 NA 1.505242 2.043966 0.7356415 1345 Flagellar capping protein [Cell motility and secretion] N flagellar hook-associated protein 1.581965 2.209669 0.9078754 - - - hypothetical protein FALSE FALSE -16 TRUE 0.130730784 1.0987630053 1.5706103637 0.4706616 0.1969412 U 0.2044969 0.6964020 13.31632653 0.798417196 0.55250065 0.689240606 0.8302232873 TRUE 0.5 0.8302232873 TRUE 0.7746875829 0.6964020 0.46469407 0.4451095 320372 3990 1064209 1064210 1 88 Same + + 0.00000000 -6.783516e+00 0 -4.641008e+00 NA 1.581965 2.209669 0.9078754 - - - hypothetical protein 1.628885 2.185602 0.7491020 3914 Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] O TPR domain protein FALSE FALSE -15 TRUE 0.130730784 0.0863467148 -0.0468918150 0.4706616 0.1969412 U 0.2044969 0.4644599 24.75000000 0.651921053 0.01536016 0.511906396 0.0283875884 FALSE 0.5 0.0283875884 FALSE 0.0398721606 0.4644599 0.02169197 0.2327097 320372 3990 1064210 1064211 1 -3 Same + + 0.00000000 1.726344e+00 0 8.658757e-01 376.7 1.628885 2.185602 0.7491020 3914 Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] O TPR domain protein 1.598213 2.143672 0.7443845 399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane] M aminotransferase, DegT/DnrJ/EryC1/StrS family - FALSE FALSE -14 TRUE 0.130730784 0.5788612584 1.2236051005 0.4706616 0.7873368 N 0.6473008 0.7323462 7.22959184 0.838434824 0.62484514 0.743981918 0.8963018682 TRUE 0.5 0.8963018682 TRUE 0.8528756386 0.7323462 0.52764859 0.4889732 320372 3990 1064211 1064212 1 -3 Same + + 1.26066815 9.329705e-01 0 -7.198263e-01 376.7 1.598213 2.143672 0.7443845 399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane] M aminotransferase, DegT/DnrJ/EryC1/StrS family 1.541198 2.096371 0.7593200 332 3-oxoacyl-[acyl-carrier-protein] I 3-oxoacyl-(acyl-carrier-protein) synthase III - FALSE FALSE -13 TRUE -0.037174171 -0.0260088269 0.9681487279 0.4706616 0.7873368 N 0.6473008 0.6780251 7.22959184 0.838434824 0.51255023 0.743981918 0.8451215294 TRUE 0.5 0.8451215294 TRUE 0.7973076088 0.6780251 0.43117049 0.4241005 320372 3990 1064212 1064213 1 9 Same + + 6.20859003 9.329705e-01 0 8.085544e-01 376.7 1.541198 2.096371 0.7593200 332 3-oxoacyl-[acyl-carrier-protein] I 3-oxoacyl-(acyl-carrier-protein) synthase III 1.306923 1.781820 0.8695041 - - - hypothetical protein FALSE FALSE -12 TRUE 1.515543684 0.5605899657 0.9681487279 0.4706616 0.7873368 U 0.2044969 0.7969960 11.97959184 0.823332663 0.73854190 0.722968063 0.9293991177 TRUE 0.5 0.9293991177 TRUE 0.8893134691 0.7969960 0.63289481 0.5785809 320372 3990 1064215 1064216 1 -60 Same + + 13.54167351 1.509582e+00 0 2.537525e+01 376.7 1.612371 2.186934 0.7592804 332 3-oxoacyl-[acyl-carrier-protein] I 3-oxoacyl- synthase 1.751464 2.367248 0.8138146 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] QR oxidoreductase, short chain dehydrogenase/reductase family - FALSE FALSE -11 TRUE 2.491663895 2.1158165803 1.1525179216 0.4706616 0.7873368 N 0.6473008 0.9035296 3.36224490 0.312151833 0.89040129 0.202629867 0.7866363808 TRUE 0.5 0.7866363808 TRUE 0.6263562828 0.9035296 0.78695959 0.7660964 320372 3990 1064216 1064217 1 0 Same + + 7.71272789 1.020441e-01 0 1.650398e+01 376.7 1.751464 2.367248 0.8138146 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] QR oxidoreductase, short chain dehydrogenase/reductase family 1.797747 2.416877 0.8169486 110 Acetyltransferase (isoleucine patch superfamily) [General function prediction only] R hexapeptide transferase family protein FALSE FALSE -10 TRUE 1.817309535 1.8995072949 0.3080577180 0.4706616 0.7873368 U 0.2044969 0.7713405 9.36224490 0.868052223 0.69570364 0.786505072 0.9376590187 TRUE 0.5 0.9376590187 TRUE 0.9052777575 0.7713405 0.59229171 0.5412119 320372 3990 1064217 1064218 1 2 Same + + 0.00000000 1.802168e+00 0 1.802168e+00 376.7 1.797747 2.416877 0.8169486 110 Acetyltransferase (isoleucine patch superfamily) [General function prediction only] R hexapeptide transferase family protein 1.744957 2.293783 0.7718615 4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only] PR Rieske (2Fe-2S) domain protein FALSE FALSE -9 TRUE 0.130730784 0.8068004496 1.2466787273 0.4706616 0.7873368 U 0.2044969 0.6987685 10.06632653 0.867144002 0.55749250 0.785174459 0.8915750008 TRUE 0.5 0.8915750008 TRUE 0.8521486414 0.6987685 0.46894361 0.4478818 320372 3990 1064221 1064222 1 283 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.512799 2.007474 0.6967849 3511 Phospholipase C [Cell envelope biogenesis, outer membrane] M acid phosphatase 3.397860 4.516646 1.1713624 - - - hypothetical protein TRUE FALSE -9 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 33.88775510 0.159256133 0.01536016 0.095900102 0.0029462475 FALSE 0.5 0.0029462475 FALSE 0.0041824973 0.4537101 0.02169197 0.2250694 320372 3990 1064222 1064223 1 44 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 3.397860 4.516646 1.1713624 - - - hypothetical protein 1.556416 2.130986 0.8043838 4380 Uncharacterized protein conserved in bacteria [Function unknown] S lipoprotein, putative TRUE FALSE -10 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 19.20918367 0.685959147 0.01536016 0.550189263 0.0329517469 FALSE 0.5 0.0329517469 FALSE 0.0461950187 0.4537101 0.02169197 0.2250694 320372 3990 1064223 1064224 1 -3 Same - - 9.52859078 6.610805e+00 0 3.706648e+01 NA 1.556416 2.130986 0.8043838 4380 Uncharacterized protein conserved in bacteria [Function unknown] S lipoprotein, putative 1.789300 2.293721 0.8456173 4259 Uncharacterized protein conserved in bacteria [Function unknown] S hypothetical protein TRUE FALSE -11 TRUE 2.075855305 2.2822358521 2.1153087210 0.4706616 0.1969412 U 0.2044969 0.8986468 7.22959184 0.838434824 0.88422835 0.743981918 0.9753909436 TRUE 0.5 0.9753909436 TRUE 0.9485556698 0.8986468 0.78036797 0.7561350 320372 3990 1064224 1064225 1 60 Same - - 6.39309656 4.725105e+00 0 3.204529e+01 NA 1.789300 2.293721 0.8456173 4259 Uncharacterized protein conserved in bacteria [Function unknown] S hypothetical protein 1.409105 1.892080 0.7172508 1462 Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane] M CsgG family protein TRUE FALSE -12 TRUE 1.545386718 2.2204110926 1.9117682212 0.4706616 0.1969412 U 0.2044969 0.8576849 21.52551020 0.659820504 0.82967566 0.520646967 0.9042897800 TRUE 0.5 0.9042897800 TRUE 0.8353069988 0.8576849 0.72336635 0.6782018 320372 3990 1064226 1064227 1 712 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 2.677368 3.618206 1.0654965 - - - hypothetical protein 2.409007 3.222944 0.8980787 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] R 3-oxoadipate enol-lactone hydrolase family protein FALSE FALSE -12 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 38.46938776 0.023849144 0.01536016 0.013496608 0.0003809856 FALSE 0.5 0.0003809856 FALSE 0.0005414322 0.4537101 0.02169197 0.2250694 320372 3990 1064228 1064229 1 269 Same - - 0.00000000 -5.727484e+00 0 -7.316218e+00 376.7 1.428543 1.948729 0.6717177 840 Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] NT putative methyl-accepting chemotaxis protein 1.684229 2.218951 0.7565255 277 FAD/FMN-containing dehydrogenases [Energy production and conversion] C hexose oxidase - TRUE FALSE -12 TRUE 0.130730784 0.1492373961 -0.0582225551 0.4706616 0.7873368 N 0.6473008 0.5635558 33.54591837 0.178820531 0.20503995 0.108687475 0.0531790217 FALSE 0.5 0.0531790217 FALSE 0.0513548284 0.5635558 0.19910192 0.3110817 320372 3990 1064229 1064230 1 183 Same - - 0.00000000 4.013701e-01 0 7.225378e-02 376.7 1.684229 2.218951 0.7565255 277 FAD/FMN-containing dehydrogenases [Energy production and conversion] C hexose oxidase 2.415029 3.203211 0.9499809 - - - Chitin binding domain TRUE FALSE -13 TRUE 0.130730784 0.1217572175 0.7384445274 0.4706616 0.7873368 U 0.2044969 0.6262855 31.02551020 0.367394960 0.38747874 0.245405534 0.2686797133 FALSE 0.5 0.2686797133 FALSE 0.2236113131 0.6262855 0.33151628 0.3695008 320372 3990 1064230 1064231 1 901 Same - - 0.00000000 -2.641764e+01 0 -4.182818e+00 NA 2.415029 3.203211 0.9499809 - - - Chitin binding domain 2.461032 3.332464 1.0040527 3514 Uncharacterized protein conserved in bacteria [Function unknown] S hypothetical protein TRUE FALSE -14 TRUE 0.130730784 0.0746945034 0.0508900550 0.4706616 0.1969412 U 0.2044969 0.4781443 39.11224490 0.017624385 0.01536016 0.009946386 0.0002797906 FALSE 0.5 0.0002797906 FALSE 0.0003976373 0.4781443 0.02169197 0.2426598 320372 3990 1064231 1064232 1 157 Same - - 0.00000000 9.619514e-03 0 9.619514e-03 NA 2.461032 3.332464 1.0040527 3514 Uncharacterized protein conserved in bacteria [Function unknown] S hypothetical protein 3.970747 5.454047 1.1322972 - - - gp30 TRUE FALSE -15 TRUE 0.130730784 0.0319283192 0.1660823133 0.4706616 0.1969412 U 0.2044969 0.4939197 29.80102041 0.463456535 0.01536016 0.326008393 0.0132956429 FALSE 0.5 0.0132956429 FALSE 0.0301935564 0.4939197 0.03478942 0.2544542 320372 3990 1064232 1064233 1 2282 Same - - 0.00000000 0.000000e+00 0 -1.923719e-01 NA 3.970747 5.454047 1.1322972 - - - gp30 6.131893 8.445173 1.0708713 - - - putative DNA-binding protein TRUE FALSE -16 TRUE 0.130730784 -0.0493292960 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4548076 40.16326531 0.010558988 0.01536016 0.005940390 0.0001664479 FALSE 0.5 0.0001664479 FALSE 0.0002365664 0.4548076 0.02169197 0.2258425 320372 3990 1064233 1064234 1 8 Same - - 2.89037176 0.000000e+00 0 2.890372e+00 NA 6.131893 8.445173 1.0708713 - - - putative DNA-binding protein 8.097254 11.014680 1.1928476 - - - putative bacteriophage protein TRUE FALSE -17 TRUE 0.696306028 1.1094312200 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.5412162 11.81122449 0.828117820 0.12985653 0.729578799 0.4182694149 FALSE 0.5 0.4182694149 FALSE 0.4566300891 0.5412162 0.14851918 0.2920531 320372 3990 1064234 1064235 1 1470 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 8.097254 11.014680 1.1928476 - - - putative bacteriophage protein NA NA NA TRUE FALSE -18 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 39.82653061 0.012478286 0.01536016 0.007026132 0.0001970792 FALSE 0.5 0.0001970792 FALSE 0.0002800980 0.4537101 0.02169197 0.2250694 320372 3990 1064236 1064237 1 266 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.944193 2.535895 0.7899795 3245 Cytochrome c5 [Energy production and conversion] C cytochrome c family protein 3.448656 4.854627 1.0448999 - - - hypothetical protein FALSE FALSE -18 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 33.48979592 0.182155068 0.01536016 0.110890816 0.0034624392 FALSE 0.5 0.0034624392 FALSE 0.0049142164 0.4537101 0.02169197 0.2250694 320372 3990 1064239 1064240 1 -3 Same + + 0.00000000 3.769548e-01 0 3.769548e-01 NA 2.220629 3.113078 0.9651054 - - - putative membrane protein 1.912146 2.655058 0.9150967 - - - GDSL-like Lipase/Acylhydrolase domain protein FALSE FALSE -17 TRUE 0.130730784 0.3222244851 0.6227104534 0.4706616 0.1969412 U 0.2044969 0.5622976 7.22959184 0.838434824 0.20096421 0.743981918 0.5661964425 TRUE 0.5 0.5661964425 TRUE 0.5589908943 0.5622976 0.19630338 0.3099868 320372 3990 1064240 1064241 1 522 Same + + 0.00000000 -8.013929e+01 0 1.726198e+00 NA 1.912146 2.655058 0.9150967 - - - GDSL-like Lipase/Acylhydrolase domain protein 1.654647 2.258661 0.7750454 673 Predicted dehydrogenases and related proteins [General function prediction only] R oxidoreductase, Gfo/Idh/MocA family FALSE FALSE -16 TRUE 0.130730784 0.7891249271 0.2734305939 0.4706616 0.1969412 U 0.2044969 0.5192236 37.42346939 0.038550019 0.04952140 0.021959623 0.0020846932 FALSE 0.5 0.0020846932 FALSE 0.0042788678 0.5192236 0.09680036 0.2741355 320372 3990 1064241 1064242 1 172 Same + + 0.00000000 2.583659e+00 0 2.583659e+00 NA 1.654647 2.258661 0.7750454 673 Predicted dehydrogenases and related proteins [General function prediction only] R oxidoreductase, Gfo/Idh/MocA family 1.895472 2.542161 0.9399149 - - - lipoprotein, putative FALSE FALSE -15 TRUE 0.130730784 1.0310174624 1.5044011544 0.4706616 0.1969412 U 0.2044969 0.6876190 30.52040816 0.410125120 0.53367318 0.280232681 0.4431096132 FALSE 0.5 0.4431096132 FALSE 0.3614641704 0.6876190 0.44878854 0.4349552 320372 3990 1064242 1064243 1 799 Same + + 0.00000000 -6.227786e+01 0 -5.372709e+00 NA 1.895472 2.542161 0.9399149 - - - lipoprotein, putative 1.504243 2.008646 0.7116123 404 Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] E glycine cleavage system T protein FALSE FALSE -14 TRUE 0.130730784 0.1103045955 0.1555929581 0.4706616 0.1969412 U 0.2044969 0.4934725 38.85714286 0.019887987 0.01536016 0.011235136 0.0003164433 FALSE 0.5 0.0003164433 FALSE 0.0007064891 0.4934725 0.03366847 0.2541150 320372 3990 1064243 1064244 1 94 Same + + 166.99923201 1.896907e+01 0 6.113833e+02 6.0 1.504243 2.008646 0.7116123 404 Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] E glycine cleavage system T protein 1.471430 2.023260 0.8183404 509 Glycine cleavage system H protein (lipoate-binding) [Amino acid transport and metabolism] E glycine cleavage system H protein E FALSE FALSE -13 TRUE 4.705594494 3.4604447411 2.7954234799 0.4706616 3.7814708 Y 2.5451747 0.9980569 25.38265306 0.642367282 0.99800154 0.501448529 0.9988863863 TRUE 0.5 0.9988863863 TRUE 0.9458598339 0.9980569 0.90677381 0.9944635 320372 3990 1064244 1064245 1 550 Same + + 43.75140355 -6.011849e+01 0 4.306799e+02 376.7 1.471430 2.023260 0.8183404 509 Glycine cleavage system H protein (lipoate-binding) [Amino acid transport and metabolism] E glycine cleavage system H protein 1.343879 1.811666 0.5957138 1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism] E glycine dehydrogenase E FALSE FALSE -12 TRUE 3.725026429 3.3636119714 0.1480615305 0.4706616 0.7873368 Y 2.5451747 0.9596879 37.63775510 0.034982717 0.95688198 0.019895777 0.4458253249 FALSE 0.5 0.4458253249 FALSE 0.1819533104 0.9596879 0.85985939 0.8927634 320372 3990 1064245 1064246 1 152 Same + + 0.00000000 1.302690e+00 0 1.302690e+00 NA 1.343879 1.811666 0.5957138 1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism] E glycine dehydrogenase 1.408322 1.902557 0.6763859 - - - hypothetical protein FALSE FALSE -11 TRUE 0.130730784 0.6812768766 1.0799085548 0.4706616 0.1969412 U 0.2044969 0.6293170 29.56632653 0.479777439 0.39537409 0.340561282 0.3761992849 FALSE 0.5 0.3761992849 FALSE 0.3197270164 0.6293170 0.33758113 0.3725284 320372 3990 1064246 1064247 1 34 Same + + 0.00000000 3.037049e+00 0 3.037049e+00 NA 1.408322 1.902557 0.6763859 - - - hypothetical protein 1.447106 1.952953 0.6888282 1760 L-serine deaminase [Amino acid transport and metabolism] E L-serine ammonia-lyase FALSE FALSE -10 TRUE 0.130730784 1.1555461921 1.6573897927 0.4706616 0.1969412 U 0.2044969 0.7073474 17.31122449 0.715982024 0.57530878 0.585345824 0.7734967334 TRUE 0.5 0.7734967334 TRUE 0.7029713855 0.7073474 0.48422278 0.4580643 320372 3990 1064249 1064250 1 29 Same + + 0.00000000 1.872473e+00 0 1.872473e+00 NA 1.520504 2.047551 0.7214089 28 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] EH acetolactate synthase isozyme II large subunit 1.688747 2.302164 0.8160229 859 ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] M hypothetical protein - FALSE FALSE -9 TRUE 0.130730784 0.8382832347 1.2795274542 0.4706616 0.1969412 N 0.6473008 0.6987551 16.61734694 0.729361313 0.55746426 0.601453489 0.7724613267 TRUE 0.5 0.7724613267 TRUE 0.7041006954 0.6987551 0.46891953 0.4478660 320372 3990 1064255 1064256 1 66 Same - - 0.00000000 3.949966e-01 0 3.949966e-01 NA 1.707178 2.427463 0.9815917 - - - putative membrane protein 1.589980 2.185322 0.7771725 4302 Ethanolamine ammonia-lyase, small subunit [Amino acid transport and metabolism] E ethanolamine ammonia-lyase, light chain TRUE FALSE -9 TRUE 0.130730784 0.3900184898 0.6950234746 0.4706616 0.1969412 U 0.2044969 0.5732622 22.36224490 0.653189100 0.23588029 0.513303718 0.3676496822 FALSE 0.5 0.3676496822 FALSE 0.3475779588 0.5732622 0.22049404 0.3196241 320372 3990 1064256 1064257 1 -3 Same - - 44.27393896 1.083368e+01 0 1.732886e+02 2.0 1.589980 2.185322 0.7771725 4302 Ethanolamine ammonia-lyase, small subunit [Amino acid transport and metabolism] E ethanolamine ammonia-lyase, light chain 1.372574 1.859250 0.6534220 4303 Ethanolamine ammonia-lyase, large subunit [Amino acid transport and metabolism] E ethanolamine ammonia-lyase, large subunit E TRUE FALSE -10 TRUE 3.746866032 2.9383735621 2.3628077976 0.4706616 4.1099213 Y 2.5451747 0.9963245 7.22959184 0.838434824 0.99621320 0.743981918 0.9992680506 TRUE 0.5 0.9992680506 TRUE 0.9801059478 0.9963245 0.90470328 0.9895609 320372 3990 1064257 1064258 1 10 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.372574 1.859250 0.6534220 4303 Ethanolamine ammonia-lyase, large subunit [Amino acid transport and metabolism] E ethanolamine ammonia-lyase, large subunit 7.437708 10.087974 1.1743998 - - - hypothetical protein TRUE FALSE -11 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 12.13265306 0.819572717 0.01536016 0.717804211 0.0661714463 FALSE 0.5 0.0661714463 FALSE 0.0915024075 0.4537101 0.02169197 0.2250694 320372 3990 1064258 1064259 1 -1456 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 7.437708 10.087974 1.1743998 - - - hypothetical protein 1.357758 1.819338 0.6083598 531 Amino acid transporters [Amino acid transport and metabolism] E ethanolamine permease TRUE FALSE -12 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 0.50000000 0.016999063 0.01536016 0.009590824 0.0002696945 FALSE 0.5 0.0002696945 FALSE 0.0003832905 0.4537101 0.02169197 0.2250694 320372 3990 1064260 1064261 1 40 Same + + 0.00000000 9.163411e-02 0 9.163411e-02 NA 2.081707 2.845607 0.9125598 3594 Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism] G acyltransferase family protein 1.831307 2.506357 1.0317711 - - - hypothetical protein FALSE FALSE -12 TRUE 0.130730784 0.1274348536 0.3013616923 0.4706616 0.1969412 U 0.2044969 0.5143958 18.45918367 0.697452465 0.03096673 0.563489530 0.0686132111 FALSE 0.5 0.0686132111 FALSE 0.1767165061 0.5143958 0.08518085 0.2703053 320372 3990 1064263 1064264 1 241 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 2.460142 3.244208 1.1021722 - - - hypothetical protein 2.908305 3.986460 0.9903572 - - - hypothetical protein FALSE FALSE -11 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 32.97448980 0.214101925 0.01536016 0.132361942 0.0042318549 FALSE 0.5 0.0042318549 FALSE 0.0060042990 0.4537101 0.02169197 0.2250694 320372 3990 1064265 1064266 1 13 Same - - 0.00000000 1.529773e+00 0 1.529773e+00 NA 2.229246 2.735663 0.8729897 - - - hypothetical protein 1.407428 1.926204 0.6600143 2217 Cation transport ATPase [Inorganic ion transport and metabolism] P cadmium-translocating P-type ATPase TRUE FALSE -11 TRUE 0.130730784 0.7411835720 1.1576040554 0.4706616 0.1969412 U 0.2044969 0.6402863 12.91836735 0.806547220 0.42331807 0.700120015 0.7537218738 TRUE 0.5 0.7537218738 TRUE 0.7004112994 0.6402863 0.35928431 0.3836543 320372 3990 1064267 1064268 1 85 Same + + 0.00000000 2.219699e+00 0 2.128315e+00 NA 1.789295 2.399098 0.8572652 789 Predicted transcriptional regulators [Transcription] K Cd(II)/Pb(II)-responsive transcriptional regulator 1.935095 2.740776 0.9269429 1695 Predicted transcriptional regulators [Transcription] K putative PadR transcriptional regulator K FALSE FALSE -11 TRUE 0.130730784 0.9124589297 1.3937190844 0.4706616 0.1969412 Y 2.5451747 0.8489042 24.45918367 0.652855423 0.81729627 0.512935811 0.8937612862 TRUE 0.5 0.8937612862 TRUE 0.8220905988 0.8489042 0.71073611 0.6627020 320372 3990 1064271 1064272 1 61 Same - - 0.00000000 3.749213e-01 0 3.749213e-01 NA 1.912282 2.510480 0.9292701 - - - hypothetical protein 1.549936 2.027902 0.7349986 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET lysine-arginine-ornithine-binding periplasmic protein TRUE FALSE -11 TRUE 0.130730784 0.3193935632 0.6199780795 0.4706616 0.1969412 U 0.2044969 0.5618785 21.67857143 0.658778162 0.19960259 0.519488738 0.3249915563 FALSE 0.5 0.3249915563 FALSE 0.3191602030 0.5618785 0.19536992 0.3096227 320372 3990 1064272 1064273 1 54 Same - - 1.91875916 1.302690e+00 0 6.648628e+00 376.7 1.549936 2.027902 0.7349986 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET lysine-arginine-ornithine-binding periplasmic protein 1.431779 1.963607 0.7137257 436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] E aromatic aminotransferase E TRUE FALSE -12 TRUE 0.301260500 1.4873262057 1.0799085548 0.4706616 0.7873368 Y 2.5451747 0.8670358 20.68367347 0.666142929 0.84258316 0.527704526 0.9143830504 TRUE 0.5 0.9143830504 TRUE 0.8480566153 0.8670358 0.73665372 0.6951541 320372 3990 1064273 1064274 1 125 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.431779 1.963607 0.7137257 436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] E aromatic aminotransferase 4.778576 6.414498 1.1849563 - - - hypothetical protein TRUE FALSE -13 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 27.87755102 0.579987225 0.01536016 0.436067229 0.0210871626 FALSE 0.5 0.0210871626 FALSE 0.0297085589 0.4537101 0.02169197 0.2250694 320372 3990 1064274 1064275 1 -1236 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 4.778576 6.414498 1.1849563 - - - hypothetical protein 1.850259 2.512198 0.8384780 1309 Transcriptional regulator [Transcription] K transcriptional regulator, TetR family TRUE FALSE -14 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 0.76530612 0.024134675 0.01536016 0.013659929 0.0003856579 FALSE 0.5 0.0003856579 FALSE 0.0005480711 0.4537101 0.02169197 0.2250694 320372 3990 1064276 1064277 1 -1530 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.414049 1.906410 0.6546985 1960 Acyl-CoA dehydrogenases [Lipid metabolism] I acyl-CoA dehydrogenase 6.857843 9.062823 1.2331050 - - - hypothetical protein FALSE FALSE -14 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 0.44897959 0.015869382 0.01536016 0.008948979 0.0002514874 FALSE 0.5 0.0002514874 FALSE 0.0003574172 0.4537101 0.02169197 0.2250694 320372 3990 1064279 1064280 1 -231 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.519340 2.082242 0.7336732 318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] IQ long-chain fatty-acid-CoA ligase 4.464474 6.176883 1.0714649 - - - hypothetical protein FALSE FALSE -13 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 2.56122449 0.172720299 0.01536016 0.104674773 0.0032463627 FALSE 0.5 0.0032463627 FALSE 0.0046079593 0.4537101 0.02169197 0.2250694 320372 3990 1064281 1064282 1 85 Same - - 1.27122503 7.519483e+00 0 8.790708e+00 NA 1.288712 1.664699 0.5686001 683 ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] E outative extracellular ligand binding protein 1.375951 1.885928 0.6309012 4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] C proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase - TRUE FALSE -13 TRUE -0.023174605 1.6140906861 2.1752709461 0.4706616 0.1969412 N 0.6473008 0.7881692 24.45918367 0.652855423 0.72411811 0.512935811 0.8315420954 TRUE 0.5 0.8315420954 TRUE 0.7534888135 0.7881692 0.61909116 0.5654355 320372 3990 1064283 1064284 1 95 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 3.354654 4.641197 1.0375871 - - - hypothetical protein 1.962253 2.656584 0.9701731 - - - hypothetical protein FALSE FALSE -13 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 25.46428571 0.640864910 0.01536016 0.499815127 0.0270833562 FALSE 0.5 0.0270833562 FALSE 0.0380609535 0.4537101 0.02169197 0.2250694 320372 3990 1064285 1064286 1 441 Same - - 2.40262714 -1.046172e+02 0 -8.639915e+00 376.7 1.678290 2.332789 0.7821189 1198 Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair] L primosomal protein n` 1.586063 2.146847 0.7486073 407 Uroporphyrinogen-III decarboxylase [Coenzyme metabolism] H uroporphyrinogen decarboxylase - TRUE FALSE -13 TRUE 0.516724186 0.1688103332 0.3327746231 0.4706616 0.7873368 N 0.6473008 0.6622090 36.47959184 0.058382977 0.47639155 0.033555151 0.0533993682 FALSE 0.5 0.0533993682 FALSE 0.0399419861 0.6622090 0.40155470 0.4067253 320372 3990 1064287 1064288 1 -277 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 3.529792 4.804843 1.0427673 - - - hypothetical protein 1.485969 1.962790 0.7022453 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET cyclohexadienyl dehydratase FALSE FALSE -13 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 2.47959184 0.160920794 0.01536016 0.096978909 0.0029828405 FALSE 0.5 0.0029828405 FALSE 0.0042343797 0.4537101 0.02169197 0.2250694 320372 3990 1064289 1064290 1 324 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.907338 2.649326 0.9663054 1832 Predicted CoA-binding protein [General function prediction only] R CoA-binding domain protein 7.472438 9.854920 1.1970027 - - - hypothetical protein TRUE FALSE -13 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 34.75000000 0.116452159 0.01536016 0.068732496 0.0020518408 FALSE 0.5 0.0020518408 FALSE 0.0029138930 0.4537101 0.02169197 0.2250694 320372 3990 1064292 1064293 1 233 Same - - 0.00000000 -1.571388e+01 0 -2.349363e+01 376.7 1.568414 2.136643 0.7270321 318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] IQ AMP-binding enzyme domain protein 1.736014 2.340130 0.8890729 355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) [Energy production and conversion] C ATP synthase F1, epsilon subunit - TRUE FALSE -14 TRUE 0.130730784 0.2898910548 0.0085697942 0.4706616 0.7873368 N 0.6473008 0.5746936 32.65816327 0.234624681 0.24034024 0.146510173 0.0884108877 FALSE 0.5 0.0884108877 FALSE 0.0811312274 0.5746936 0.22361960 0.3208984 320372 3990 1064295 1064296 1 80 Same - - 250.09293717 1.986655e+01 0 1.254510e+03 19.0 1.552213 2.086720 0.6556505 55 F0F1-type ATP synthase, beta subunit [Energy production and conversion] C ATP synthase F1, beta subunit 1.481587 2.003435 0.7179813 224 F0F1-type ATP synthase, gamma subunit [Energy production and conversion] C ATP synthase F1, gamma subunit C TRUE FALSE -15 TRUE 4.918352613 3.6131561191 2.9790663020 0.4706616 3.2379254 Y 2.5451747 0.9981059 23.85204082 0.650723158 0.99805200 0.510588386 0.9989534606 TRUE 0.5 0.9989534606 TRUE 0.9477363633 0.9981059 0.90683227 0.9946026 320372 3990 1064296 1064297 1 72 Same - - 287.37952033 1.978913e+01 0 1.469186e+03 19.0 1.481587 2.003435 0.7179813 224 F0F1-type ATP synthase, gamma subunit [Energy production and conversion] C ATP synthase F1, gamma subunit 1.420881 1.915407 0.6533878 56 F0F1-type ATP synthase, alpha subunit [Energy production and conversion] C ATP synthase F1, alpha subunit C TRUE FALSE -16 TRUE 4.978576864 3.6491124200 2.9203929067 0.4706616 3.2379254 Y 2.5451747 0.9981038 22.98979592 0.647848373 0.99804989 0.507433270 0.9989390309 TRUE 0.5 0.9989390309 TRUE 0.9471060449 0.9981038 0.90682983 0.9945968 320372 3990 1064297 1064298 1 47 Same - - 244.75960089 1.986655e+01 0 1.164594e+03 19.0 1.420881 1.915407 0.6533878 56 F0F1-type ATP synthase, alpha subunit [Energy production and conversion] C ATP synthase F1, alpha subunit 1.767557 2.512077 0.9300157 712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) [Energy production and conversion] C ATP synthase F1, delta subunit C TRUE FALSE -17 TRUE 4.908351392 3.6047171239 2.9790663020 0.4706616 3.2379254 Y 2.5451747 0.9980955 19.66836735 0.679139141 0.99804128 0.542387738 0.9990736404 TRUE 0.5 0.9990736404 TRUE 0.9537009003 0.9980955 0.90681985 0.9945730 320372 3990 1064298 1064299 1 3 Same - - 167.85860859 1.986655e+01 0 8.716120e+02 19.0 1.767557 2.512077 0.9300157 712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) [Energy production and conversion] C ATP synthase F1, delta subunit 1.795622 2.435942 0.8683300 711 F0F1-type ATP synthase, subunit b [Energy production and conversion] C ATP synthase F0, B subunit C TRUE FALSE -18 TRUE 4.710488468 3.5437795649 2.9790663020 0.4706616 3.2379254 Y 2.5451747 0.9978895 10.44387755 0.864963903 0.99782899 0.781987454 0.9996604455 TRUE 0.5 0.9996604455 TRUE 0.9841661962 0.9978895 0.90657392 0.9939884 320372 3990 1064299 1064300 1 128 Same - - 62.58301453 1.973472e+01 0 4.719515e+02 19.0 1.795622 2.435942 0.8683300 711 F0F1-type ATP synthase, subunit b [Energy production and conversion] C ATP synthase F0, B subunit 2.094451 2.686041 0.8985362 636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion] C ATP synthase c chain C TRUE FALSE -19 TRUE 4.045457472 3.3882221642 2.9180259145 0.4706616 3.2379254 Y 2.5451747 0.9969233 28.09183673 0.569233447 0.99683202 0.425279987 0.9976007853 TRUE 0.5 0.9976007853 TRUE 0.9267408356 0.9969233 0.90541943 0.9912519 320372 3990 1064300 1064301 1 77 Same - - 45.42560119 1.973472e+01 0 4.357025e+02 19.0 2.094451 2.686041 0.8985362 636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion] C ATP synthase c chain 1.684317 2.313529 0.8314944 356 F0F1-type ATP synthase, subunit a [Energy production and conversion] C ATP synthase F0, A subunit C TRUE FALSE -20 TRUE 3.773154489 3.3677082416 2.9180259145 0.4706616 3.2379254 Y 2.5451747 0.9964687 23.49489796 0.648754723 0.99636235 0.508426796 0.9980272335 TRUE 0.5 0.9980272335 TRUE 0.9461493022 0.9964687 0.90487587 0.9899679 320372 3990 1064301 1064302 1 914 Same - - 0.00000000 -9.910735e+01 0 -3.106843e+01 376.7 1.684317 2.313529 0.8314944 356 F0F1-type ATP synthase, subunit a [Energy production and conversion] C ATP synthase F0, A subunit 1.768199 2.533291 0.8671225 1055 Na+/H+ antiporter NhaD and related arsenite permeases [Inorganic ion transport and metabolism] P transporter, putative - TRUE FALSE -21 TRUE 0.130730784 0.3088549178 0.3256136219 0.4706616 0.7873368 N 0.6473008 0.6182489 39.16326531 0.017201123 0.36617318 0.009705694 0.0100101092 FALSE 0.5 0.0100101092 FALSE 0.0079950401 0.6182489 0.31529553 0.3615712 320372 3990 1064302 1064303 1 -10 Same - - 0.00000000 6.174824e-01 0 -9.181698e+00 376.7 1.768199 2.533291 0.8671225 1055 Na+/H+ antiporter NhaD and related arsenite permeases [Inorganic ion transport and metabolism] P transporter, putative 1.919831 2.647170 0.8889459 1475 Predicted transcriptional regulators [Transcription] K chromosome partitioning protein ParB - TRUE FALSE -22 TRUE 0.130730784 0.1760178136 0.8577669004 0.4706616 0.7873368 N 0.6473008 0.6851039 4.79591837 0.589883639 0.52819288 0.446116266 0.6168916674 TRUE 0.5 0.6168916674 TRUE 0.5347761082 0.6851039 0.44419472 0.4320859 320372 3990 1064303 1064304 1 36 Same - - 221.60889347 -2.882778e-01 0 9.198434e+02 376.7 1.919831 2.647170 0.8889459 1475 Predicted transcriptional regulators [Transcription] K chromosome partitioning protein ParB 2.081105 2.852632 0.8871730 1192 ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] D chromosome partitioning protein ParA - TRUE FALSE -23 TRUE 4.893368907 3.5689426361 -0.1286308114 0.4706616 0.7873368 N 0.6473008 0.9424770 17.78061224 0.708193672 0.93734956 0.576096102 0.9731980470 TRUE 0.5 0.9731980470 TRUE 0.9262575794 0.9424770 0.83807127 0.8514038 320372 3990 1064304 1064305 1 53 Same - - 106.94219126 5.539459e+00 0 3.521169e+02 376.7 2.081105 2.852632 0.8871730 1192 ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] D chromosome partitioning protein ParA 2.444360 3.393378 0.9811881 357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] M methyltransferase GidB - TRUE FALSE -24 TRUE 4.449862626 3.2902536676 2.0162729175 0.4706616 0.7873368 N 0.6473008 0.9776092 20.53571429 0.667585403 0.97648975 0.529322511 0.9881535777 TRUE 0.5 0.9881535777 TRUE 0.9375720755 0.9776092 0.88205090 0.9385313 320372 3990 1064305 1064306 1 -3 Same - - 91.16815981 1.986655e+01 0 5.142172e+02 376.7 2.444360 3.393378 0.9811881 357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] M methyltransferase GidB 2.703642 3.623495 0.9753909 445 NAD/FAD-utilizing enzyme apparently involved in cell division [Cell division and chromosome partitioning] D glucose-inhibited division protein A - TRUE FALSE -25 TRUE 4.355212117 3.4170324252 2.9790663020 0.4706616 0.7873368 N 0.6473008 0.9863788 7.22959184 0.838434824 0.98582496 0.743981918 0.9972368703 TRUE 0.5 0.9972368703 TRUE 0.9773695979 0.9863788 0.89273070 0.9620115 320372 3990 1064306 1064307 1 162 Same - - 0.00000000 -2.235268e+01 0 -4.870364e+00 376.7 2.703642 3.623495 0.9753909 445 NAD/FAD-utilizing enzyme apparently involved in cell division [Cell division and chromosome partitioning] D glucose-inhibited division protein A 3.059005 4.243428 1.0248900 410 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, ATP-binding protein - TRUE FALSE -26 TRUE 0.130730784 0.0935002233 0.0367978570 0.4706616 0.7873368 N 0.6473008 0.5760586 30.04081633 0.446347977 0.24457262 0.311032418 0.2069828542 FALSE 0.5 0.2069828542 FALSE 0.1910678989 0.5760586 0.22659324 0.3221172 320372 3990 1064307 1064308 1 3 Same - - 15.75401014 1.033215e+01 0 4.350765e+01 98.0 3.059005 4.243428 1.0248900 410 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, ATP-binding protein 2.385016 3.312765 0.9494406 411 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E branched-chain amino acid ABC tranpsorter, permease/ATP-binding protein E TRUE FALSE -27 TRUE 2.620096587 2.3553153910 2.3386061525 0.4706616 2.1580561 Y 2.5451747 0.9865250 10.44387755 0.864963903 0.98597919 0.781987454 0.9977848962 TRUE 0.5 0.9977848962 TRUE 0.9816199525 0.9865250 0.89290777 0.9624093 320372 3990 1064308 1064309 1 5 Same - - 12.61851593 1.280480e+01 0 4.278229e+01 332.0 2.385016 3.312765 0.9494406 411 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E branched-chain amino acid ABC tranpsorter, permease/ATP-binding protein 1.880237 2.647922 0.8862122 559 Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, permease protein E TRUE FALSE -28 TRUE 2.401645942 2.3467505852 2.4216649418 0.4706616 1.3510958 Y 2.5451747 0.9809602 11.09693878 0.850548298 0.98007653 0.761159754 0.9964407512 TRUE 0.5 0.9964407512 TRUE 0.9779224178 0.9809602 0.88614549 0.9474160 320372 3990 1064309 1064310 1 313 Same - - 12.43291245 -6.310682e+01 0 2.209783e+01 NA 1.880237 2.647922 0.8862122 559 Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, permease protein 1.993970 2.640741 0.8383667 683 ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein E TRUE FALSE -29 TRUE 2.387375423 2.0471072977 0.1601581466 0.4706616 0.1969412 Y 2.5451747 0.9022354 34.46938776 0.129288203 0.88877174 0.076765599 0.5426433908 TRUE 0.5 0.5426433908 TRUE 0.3518454571 0.9022354 0.78521666 0.7634413 320372 3990 1064310 1064311 1 57 Same - - 0.00000000 -1.486676e+01 0 6.790401e-02 NA 1.993970 2.640741 0.8383667 683 ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein 3.485295 4.631931 1.0750470 - - - hypothetical protein TRUE FALSE -30 TRUE 0.130730784 0.1198257225 0.0064145689 0.4706616 0.1969412 U 0.2044969 0.4724428 21.05612245 0.663073335 0.01536016 0.524271093 0.0297859819 FALSE 0.5 0.0297859819 FALSE 0.0418119470 0.4724428 0.02169197 0.2384831 320372 3990 1064311 1064312 1 194 Same - - 0.00000000 -2.983752e+01 0 5.097835e-02 NA 3.485295 4.631931 1.0750470 - - - hypothetical protein 1.524716 2.124920 0.7253865 4177 ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism] E putative branched-chain amino acid ABC transporter integral membrane subunit TRUE FALSE -31 TRUE 0.130730784 0.1007030909 0.0579787969 0.4706616 0.1969412 U 0.2044969 0.4794944 31.39285714 0.335147177 0.01536016 0.220139179 0.0078023680 FALSE 0.5 0.0078023680 FALSE 0.0110536633 0.4794944 0.02169197 0.2436555 320372 3990 1064312 1064313 1 0 Same - - 46.92099792 1.690716e+01 0 1.654944e+02 332.0 1.524716 2.124920 0.7253865 4177 ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism] E putative branched-chain amino acid ABC transporter integral membrane subunit 1.630698 2.302238 0.8085277 559 Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, permease protein E TRUE FALSE -32 TRUE 3.799531344 2.9210791651 2.6579354442 0.4706616 1.3510958 Y 2.5451747 0.9919246 9.36224490 0.868052223 0.99164327 0.786505072 0.9987206743 TRUE 0.5 0.9987206743 TRUE 0.9832867066 0.9919246 0.89942488 0.9772496 320372 3990 1064313 1064314 1 140 Same - - 35.18005546 1.607439e+01 0 7.816140e+01 NA 1.630698 2.302238 0.8085277 559 Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, permease protein 1.358861 1.797255 0.6348933 683 ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein E TRUE FALSE -33 TRUE 3.548246070 2.5894697693 2.5963947022 0.4706616 0.1969412 Y 2.5451747 0.9855098 28.78571429 0.530280612 0.98490725 0.387320674 0.9866078512 TRUE 0.5 0.9866078512 TRUE 0.9028466881 0.9855098 0.89167750 0.9596513 320372 3990 1064314 1064315 1 68 Same - - 32.70422431 1.892503e+01 0 9.844350e+01 NA 1.358861 1.797255 0.6348933 683 ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein 1.371659 1.893658 0.7353223 410 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E putative branched-chain amino acid ABC transporter ATP-binding subunit E TRUE FALSE -34 TRUE 3.484592286 2.6824073738 2.7923324553 0.4706616 0.1969412 Y 2.5451747 0.9866640 22.60204082 0.650528411 0.98612574 0.510374296 0.9924984172 TRUE 0.5 0.9924984172 TRUE 0.9395688572 0.9866640 0.89307604 0.9627876 320372 3990 1064315 1064316 1 -3 Same - - 33.25076802 1.984962e+01 0 1.264770e+02 98.0 1.371659 1.893658 0.7353223 410 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E putative branched-chain amino acid ABC transporter ATP-binding subunit 1.645586 2.232640 0.8075224 411 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, ATP-binding protein E TRUE FALSE -35 TRUE 3.501513293 2.7789022295 2.9330322152 0.4706616 2.1580561 Y 2.5451747 0.9939250 7.22959184 0.838434824 0.99372595 0.743981918 0.9987848450 TRUE 0.5 0.9987848450 TRUE 0.9794540843 0.9939250 0.90182819 0.9828221 320372 3990 1064316 1064317 1 500 Same - - 3.44998755 -9.898151e+01 0 -9.913675e-01 376.7 1.645586 2.232640 0.8075224 411 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E branched-chain amino acid ABC transporter, ATP-binding protein 1.538632 2.077713 0.7189516 2303 Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] E oxidoreductase, GMC family protein E TRUE FALSE -36 TRUE 0.843801935 -0.0157212281 0.3251381743 0.4706616 0.7873368 Y 2.5451747 0.8374786 37.22448980 0.042151360 0.80079957 0.024049859 0.1503161442 FALSE 0.5 0.1503161442 FALSE 0.0907772422 0.8374786 0.69407527 0.6431157 320372 3990 1064317 1064318 1 175 Same - - 2.15176220 -9.900389e+00 0 -1.206627e+01 376.7 1.538632 2.077713 0.7189516 2303 Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] E oxidoreductase, GMC family protein 1.418532 1.906432 0.6800070 1012 NAD-dependent aldehyde dehydrogenases [Energy production and conversion] C methylmalonate-semialdehyde dehydrogenase - TRUE FALSE -37 TRUE 0.401751821 0.2137472123 -0.0233654884 0.4706616 0.7873368 N 0.6473008 0.6023682 30.61734694 0.402213142 0.32240116 0.273663993 0.2425020006 FALSE 0.5 0.2425020006 FALSE 0.2095314870 0.6023682 0.28262056 0.3463028 320372 3990 1064319 1064320 1 391 Same + + 0.00000000 -7.705775e+01 0 -5.607110e-01 376.7 1.522450 2.133447 0.7599675 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family 1.423059 1.939249 0.7915288 1437 Adenylate cyclase, class 2 (thermophilic) [Nucleotide transport and metabolism] F Adenylate cyclase - FALSE FALSE -37 TRUE 0.130730784 -0.0331287021 0.2491562360 0.4706616 0.7873368 N 0.6473008 0.6036032 35.71428571 0.080199764 0.32588775 0.046552861 0.0404468243 FALSE 0.5 0.0404468243 FALSE 0.0336182951 0.6036032 0.28519176 0.3474715 320372 3990 1064322 1064323 1 18 Same + + 0.00000000 5.265189e+00 0 4.902364e+00 376.7 1.972666 2.656288 0.8543427 3186 Phenylalanine-4-hydroxylase [Amino acid transport and metabolism] E phenylalanine-4-hydroxylase 1.928101 2.519195 0.8801320 2154 Pterin-4a-carbinolamine dehydratase [Coenzyme metabolism] H pterin-4-alpha-carbinolamine dehydratase - FALSE FALSE -36 TRUE 0.130730784 1.3382745967 1.9820165926 0.4706616 0.7873368 N 0.6473008 0.8142319 14.37755102 0.773784363 0.76580555 0.656998063 0.9179324485 TRUE 0.5 0.9179324485 TRUE 0.8687850592 0.8142319 0.65936247 0.6051745 320372 3990 1064323 1064324 1 435 Same + + 0.00000000 -1.005188e+02 0 3.600066e+00 376.7 1.928101 2.519195 0.8801320 2154 Pterin-4a-carbinolamine dehydratase [Coenzyme metabolism] H pterin-4-alpha-carbinolamine dehydratase 1.551084 2.142334 0.8001214 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK DNA-binding response regulator - FALSE FALSE -35 TRUE 0.130730784 1.2308403245 0.3284714325 0.4706616 0.7873368 N 0.6473008 0.6301337 36.42346939 0.059796597 0.39748808 0.034389573 0.0402682697 FALSE 0.5 0.0402682697 FALSE 0.0316160346 0.6301337 0.33920999 0.3733474 320372 3990 1064324 1064325 1 107 Same + + 0.00000000 5.759868e+00 0 5.759868e+00 376.7 1.551084 2.142334 0.8001214 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK DNA-binding response regulator 1.635853 2.261284 0.7865083 642 Signal transduction histidine kinase [Signal transduction mechanisms] T sensor histidine kinase T FALSE FALSE -34 TRUE 0.130730784 1.4231298834 2.0401534778 0.4706616 0.7873368 Y 2.5451747 0.9114226 26.66836735 0.620618762 0.90023990 0.478092987 0.9365569909 TRUE 0.5 0.9365569909 TRUE 0.8656557219 0.9114226 0.79752652 0.7825274 320372 3990 1064326 1064327 1 259 Same - - 0.00000000 -6.837593e+01 0 -4.981027e-01 NA 2.144889 2.796064 0.8040591 - - - SET domain protein 1.892125 2.562844 0.8185105 1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion] C oxidoreductase, FAD/FMN-binding TRUE FALSE -34 TRUE 0.130730784 -0.0375905038 0.1835057712 0.4706616 0.1969412 U 0.2044969 0.4954692 33.31122449 0.192971038 0.01536016 0.118086247 0.0037162443 FALSE 0.5 0.0037162443 FALSE 0.0095260247 0.4954692 0.03866691 0.2556319 320372 3990 1064327 1064328 1 238 Same - - 0.00000000 -1.131083e+01 0 -1.906736e+00 376.7 1.892125 2.562844 0.8185105 1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion] C oxidoreductase, FAD/FMN-binding 1.791894 2.462865 0.8207993 518 GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] F hypothetical protein - TRUE FALSE -35 TRUE 0.130730784 0.0136039716 -0.0092639116 0.4706616 0.7873368 N 0.6473008 0.5686144 32.88265306 0.219999668 0.22124415 0.136398832 0.0741859225 FALSE 0.5 0.0741859225 FALSE 0.0698612348 0.5686144 0.21029394 0.3155123 320372 3990 1064328 1064329 1 40 Same - - 0.00000000 2.223971e+00 0 2.223971e+00 376.7 1.791894 2.462865 0.8207993 518 GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] F hypothetical protein 2.385989 3.247641 0.9570820 1846 Transcriptional regulators [Transcription] K transcriptional regulator, MarR family - TRUE FALSE -36 TRUE 0.130730784 0.9436678203 1.3992699835 0.4706616 0.7873368 N 0.6473008 0.7550529 18.45918367 0.697452465 0.66699667 0.563489530 0.8219812261 TRUE 0.5 0.8219812261 TRUE 0.7501965983 0.7550529 0.56573360 0.5187592 320372 3990 1064329 1064330 1 343 Same - - 0.00000000 -3.923308e+01 0 1.749135e+00 376.7 2.385989 3.247641 0.9570820 1846 Transcriptional regulators [Transcription] K transcriptional regulator, MarR family 1.840961 2.460135 0.8169375 2170 Uncharacterized conserved protein [Function unknown] S uncharacterized enzyme subfamily, putative TRUE FALSE -37 TRUE 0.130730784 0.7940122114 0.0842829562 0.4706616 0.7873368 U 0.2044969 0.5450030 35.12244898 0.101081600 0.14303461 0.059238181 0.0184227389 FALSE 0.5 0.0184227389 FALSE 0.0205474424 0.5450030 0.15722884 0.2952183 320372 3990 1064330 1064331 1 -87 Same - - 4.54567071 1.490780e+01 0 2.338240e+01 376.7 1.840961 2.460135 0.8169375 2170 Uncharacterized conserved protein [Function unknown] S uncharacterized enzyme subfamily, putative 1.586802 2.247076 0.7834277 475 Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] P putative membrane protein TRUE FALSE -38 TRUE 1.144165715 2.0789161683 2.5193296576 0.4706616 0.7873368 U 0.2044969 0.8949597 3.04081633 0.251718372 0.87952253 0.158513782 0.7106304361 TRUE 0.5 0.7106304361 TRUE 0.5372744801 0.8949597 0.77536266 0.7487133 320372 3990 1064331 1064332 1 217 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.586802 2.247076 0.7834277 475 Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] P putative membrane protein 2.307499 3.091452 1.1373487 - - - hypothetical protein TRUE FALSE -39 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 32.14795918 0.271738126 0.01536016 0.172832909 0.0057870948 FALSE 0.5 0.0057870948 FALSE 0.0082055582 0.4537101 0.02169197 0.2250694 320372 3990 1064332 1064333 1 430 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 2.307499 3.091452 1.1373487 - - - hypothetical protein 1.872230 2.550972 0.8363902 4121 Uncharacterized conserved protein [Function unknown] S oxidoreductase, FAD-binding family protein TRUE FALSE -40 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 36.32653061 0.062305372 0.01536016 0.035873064 0.0010354576 FALSE 0.5 0.0010354576 FALSE 0.0014711202 0.4537101 0.02169197 0.2250694 320372 3990 1064333 1064334 1 620 Same - - 0.00000000 -8.813670e+01 0 -2.541418e+01 NA 1.872230 2.550972 0.8363902 4121 Uncharacterized conserved protein [Function unknown] S oxidoreductase, FAD-binding family protein 1.443939 1.953177 0.6934611 523 Putative GTPases (G3E family) [General function prediction only] R cobalamin synthesis protein/P47K family protein TRUE FALSE -41 TRUE 0.130730784 0.2941235994 0.2924628351 0.4706616 0.1969412 U 0.2044969 0.5153480 38.08673469 0.028473907 0.03465396 0.016147042 0.0010510073 FALSE 0.5 0.0010510073 FALSE 0.0028018365 0.5153480 0.08748043 0.2710579 320372 3990 1064334 1064335 1 319 Same - - 0.00000000 -6.770169e+01 0 2.024063e+00 NA 1.443939 1.953177 0.6934611 523 Putative GTPases (G3E family) [General function prediction only] R cobalamin synthesis protein/P47K family protein 2.027376 2.656797 0.8870878 - - - HpaH precursor TRUE FALSE -42 TRUE 0.130730784 0.8850381944 0.1764101433 0.4706616 0.1969412 U 0.2044969 0.5067309 34.58673469 0.123789064 0.01536016 0.073312355 0.0021990531 FALSE 0.5 0.0021990531 FALSE 0.0099687797 0.5067309 0.06653033 0.2642980 320372 3990 1064336 1064337 1 -3 Same + + 36.96931703 1.489882e+01 0 2.142960e+02 376.7 1.571428 2.105257 0.7193125 1450 Type II secretory pathway, component PulD [Cell motility and secretion / Intracellular trafficking and secretion] NU general secretion pathway protein D 1.401642 1.918210 0.6883294 2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] NU general secretory pathway protein E NU TRUE TRUE -42 TRUE 3.599562477 3.0294834786 2.5163876835 0.4706616 0.7873368 Y 2.5451747 0.9882750 7.22959184 0.838434824 0.98782165 0.743981918 0.9976299492 TRUE 0.5 0.9976299492 TRUE 0.9778983669 0.9882750 0.89502468 0.9671869 320372 3990 1064337 1064338 1 5 Same + + 107.08088968 7.898128e+00 0 4.008029e+02 376.7 1.401642 1.918210 0.6883294 2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] NU general secretory pathway protein E 1.327438 1.855063 0.6463908 1459 Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion] NU general secretion pathway protein F NU TRUE TRUE -41 TRUE 4.454621697 3.3390801496 2.1931403302 0.4706616 0.7873368 Y 2.5451747 0.9909667 11.09693878 0.850548298 0.99064294 0.761159754 0.9983430700 TRUE 0.5 0.9983430700 TRUE 0.9804890752 0.9909667 0.89827188 0.9745954 320372 3990 1064340 1064341 1 35 Same + + 3.82864140 5.512904e+00 0 8.501304e+00 7.0 1.559112 2.015249 0.7872395 2165 Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion] NU general secretion pathway protein G 1.566971 2.127364 0.8347684 2165 Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion] NU general secretion pathway protein H NU TRUE TRUE -40 TRUE 0.943811507 1.5986731825 2.0129668232 0.4706616 3.7237584 Y 2.5451747 0.9777461 17.56122449 0.711729226 0.97663673 0.580283611 0.9904038136 TRUE 0.5 0.9904038136 TRUE 0.9487001813 0.9777461 0.88221847 0.9388921 320372 3990 1064341 1064342 1 3 Same + + 1.49629526 5.512904e+00 0 1.379625e+01 7.0 1.566971 2.127364 0.8347684 2165 Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion] NU general secretion pathway protein H 1.493770 2.063378 0.8575116 2165 Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion] NU general secretory pathway protein I NU TRUE TRUE -39 TRUE 0.053109036 1.8032697581 2.0129668232 0.4706616 3.7237584 Y 2.5451747 0.9659406 10.44387755 0.864963903 0.96380567 0.781987454 0.9941713996 TRUE 0.5 0.9941713996 TRUE 0.9767416555 0.9659406 0.86765851 0.9084057 320372 3990 1064342 1064343 1 -22 Same + + 3.40994454 5.015231e+00 0 5.312124e+00 NA 1.493770 2.063378 0.8575116 2165 Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion] NU general secretory pathway protein I 1.362807 1.820272 0.6880037 4795 Type II secretory pathway, component PulJ [Intracellular trafficking and secretion] U general secretory pathway protein J U TRUE TRUE -38 TRUE 0.822965775 1.3810588526 1.9584654724 0.4706616 0.1969412 Y 2.5451747 0.9183700 4.04081633 0.448044360 0.90875987 0.312504804 0.8899284726 TRUE 0.5 0.8899284726 TRUE 0.7721302029 0.9183700 0.80673832 0.7973365 320372 3990 1064343 1064344 1 2 Same + + 1.49629526 2.868760e+00 0 2.916315e+00 NA 1.362807 1.820272 0.6880037 4795 Type II secretory pathway, component PulJ [Intracellular trafficking and secretion] U general secretory pathway protein J 1.599464 2.198221 0.7647413 3156 Type II secretory pathway, component PulK [Intracellular trafficking and secretion] U General secretion pathway protein K U TRUE TRUE -37 TRUE 0.053109036 1.1141862075 1.5894386435 0.4706616 0.1969412 Y 2.5451747 0.8592215 10.06632653 0.867144002 0.83181595 0.785174459 0.9699531968 TRUE 0.5 0.9699531968 TRUE 0.9452233156 0.8592215 0.72556124 0.6809554 320372 3990 1064344 1064345 1 67 Same + + 1.32301291 9.163325e+00 0 1.048634e+01 NA 1.599464 2.198221 0.7647413 3156 Type II secretory pathway, component PulK [Intracellular trafficking and secretion] U General secretion pathway protein K 1.431723 1.971012 0.7030133 - - - general secretion pathway protein L TRUE TRUE -36 TRUE -0.004027528 1.6951335313 2.2751169758 0.4706616 0.1969412 U 0.2044969 0.7674993 22.46428571 0.652117279 0.68904329 0.512122484 0.8059661973 TRUE 0.5 0.8059661973 TRUE 0.7263455502 0.7674993 0.58608415 0.5358312 320372 3990 1064345 1064346 1 -3 Same + + 1.26694760 6.333917e+00 0 8.718895e+00 376.7 1.431723 1.971012 0.7030133 - - - general secretion pathway protein L 1.416754 1.963949 0.7968928 3149 Type II secretory pathway, component PulM [Intracellular trafficking and secretion] U general secretory pathway protein M TRUE TRUE -35 TRUE -0.034713069 1.6084760492 2.0963979701 0.4706616 0.7873368 U 0.2044969 0.7830298 7.22959184 0.838434824 0.71557003 0.743981918 0.9288542075 TRUE 0.5 0.9288542075 TRUE 0.8907123816 0.7830298 0.61097448 0.5579232 320372 3990 1064346 1064347 1 39 Same + + 1.96009478 8.307763e+00 0 2.379071e+01 376.7 1.416754 1.963949 0.7968928 3149 Type II secretory pathway, component PulM [Intracellular trafficking and secretion] U general secretory pathway protein M 1.646886 2.284113 0.7995950 - - - general secretory pathway protein N TRUE TRUE -34 TRUE 0.324192450 2.0933145554 2.2193827393 0.4706616 0.7873368 U 0.2044969 0.8263289 18.30102041 0.699928501 0.78426120 0.566380292 0.8945072836 TRUE 0.5 0.8945072836 TRUE 0.8305540005 0.8263289 0.67756442 0.6246087 320372 3990 1064348 1064349 1 222 Same - - 0.00000000 1.447947e+00 0 1.447947e+00 NA 1.571608 2.128391 0.7429911 1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU RND efflux system, outer membrane lipoprotein, NodT family 1.830525 2.460893 0.9746123 - - - hypothetical protein FALSE TRUE -34 TRUE 0.130730784 0.7206102912 1.1373204451 0.4706616 0.1969412 U 0.2044969 0.6373755 32.37244898 0.254677865 0.41599666 0.160612663 0.1957539877 FALSE 0.5 0.1957539877 FALSE 0.1574617873 0.6373755 0.35356183 0.3806755 320372 3990 1064350 1064351 1 148 Same + + 3.63758616 2.521042e+00 0 -6.785985e-01 376.7 1.570789 2.179900 0.8339331 1846 Transcriptional regulators [Transcription] K MarR family protein 1.411889 1.945976 0.6681431 - - - drug resistance transporter, EmrB/QacA family TRUE TRUE -34 TRUE 0.914727087 -0.0285636592 1.4894899550 0.4706616 0.7873368 U 0.2044969 0.7908076 29.35714286 0.493919155 0.72846321 0.353387011 0.7236250494 TRUE 0.5 0.7236250494 TRUE 0.6175065144 0.7908076 0.62323513 0.5693322 320372 3990 1064353 1064354 1 30 Same + + 7.18256353 4.171877e+00 0 5.635962e+01 NA 1.515003 2.145986 0.8704434 1380 Putative effector of murein hydrolase LrgA [General function prediction only] R LrgA family protein 1.463261 2.062913 0.8012644 1346 Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] M membrane protein, putative TRUE TRUE -33 TRUE 1.710257600 2.4454235513 1.8402031343 0.4706616 0.1969412 U 0.2044969 0.8641921 16.72959184 0.727091478 0.83868735 0.598701134 0.9326677195 TRUE 0.5 0.9326677195 TRUE 0.8795234621 0.8641921 0.73263044 0.6899489 320372 3990 1064354 1064355 1 774 Same + + 0.00000000 -8.177838e+01 0 -1.565055e+01 NA 1.463261 2.062913 0.8012644 1346 Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] M membrane protein, putative 1.765406 2.440551 0.8656520 1580 Flagellar basal body-associated protein [Cell motility and secretion] N Flagellar basal body-associated protein FliL - TRUE TRUE -32 TRUE 0.130730784 0.2491195890 0.2783737324 0.4706616 0.1969412 N 0.6473008 0.5600498 38.75510204 0.020866344 0.19363740 0.011792952 0.0050915073 FALSE 0.5 0.0050915073 FALSE 0.0050155391 0.5600498 0.19128911 0.3080378 320372 3990 1064355 1064356 1 23 Same + + 50.51858126 1.559296e+01 0 3.400228e+02 2.0 1.765406 2.440551 0.8656520 1580 Flagellar basal body-associated protein [Cell motility and secretion] N Flagellar basal body-associated protein FliL 1.451401 1.957235 0.7156530 1868 Flagellar motor switch protein [Cell motility and secretion] N flagellar motor switch protein FliM N TRUE TRUE -31 TRUE 3.874746781 3.2679814365 2.5681082836 0.4706616 4.1099213 Y 2.5451747 0.9969844 15.50000000 0.751984155 0.99689515 0.629334542 0.9989738381 TRUE 0.5 0.9989738381 TRUE 0.9667222621 0.9969844 0.90549252 0.9914247 320372 3990 1064356 1064357 1 59 Same + + 22.03351681 1.548899e+01 0 2.423364e+02 NA 1.451401 1.957235 0.7156530 1868 Flagellar motor switch protein [Cell motility and secretion] N flagellar motor switch protein FliM 1.422199 1.920891 0.7991952 1886 Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion] NU flagellar motor switch protein FliN N TRUE TRUE -30 TRUE 3.070086622 3.0804501237 2.5592063486 0.4706616 0.1969412 Y 2.5451747 0.9817262 21.37755102 0.660816890 0.98089299 0.521755532 0.9901007214 TRUE 0.5 0.9901007214 TRUE 0.9386693158 0.9817262 0.88707907 0.9494620 320372 3990 1064357 1064358 1 -3 Same + + 0.00000000 3.980538e+00 0 3.980538e+00 NA 1.422199 1.920891 0.7991952 1886 Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion] NU flagellar motor switch protein FliN 1.637570 2.243334 0.8537344 3190 Flagellar biogenesis protein [Cell motility and secretion] N flagellar protein FliO N TRUE TRUE -29 TRUE 0.130730784 1.2657943449 1.8036579559 0.4706616 0.1969412 Y 2.5451747 0.8784336 7.22959184 0.838434824 0.85794445 0.743981918 0.9690801629 TRUE 0.5 0.9690801629 TRUE 0.9404364123 0.8784336 0.75262680 0.7164676 320372 3990 1064358 1064359 1 2 Same + + 3.63758616 3.930660e+00 0 7.568246e+00 376.7 1.637570 2.243334 0.8537344 3190 Flagellar biogenesis protein [Cell motility and secretion] N flagellar protein FliO 1.521215 2.098986 0.7613892 1338 Flagellar biosynthesis pathway, component FliP [Cell motility and secretion / Intracellular trafficking and secretion] NU flagellar biosynthetic protein N TRUE TRUE -28 TRUE 0.914727087 1.5459602949 1.7961408453 0.4706616 0.7873368 Y 2.5451747 0.9304703 10.06632653 0.867144002 0.92329543 0.785174459 0.9874316711 TRUE 0.5 0.9874316711 TRUE 0.9680128524 0.9304703 0.82258671 0.8239386 320372 3990 1064359 1064360 1 26 Same + + 105.48621203 1.435623e+01 0 3.956182e+02 62.0 1.521215 2.098986 0.7613892 1338 Flagellar biosynthesis pathway, component FliP [Cell motility and secretion / Intracellular trafficking and secretion] NU flagellar biosynthetic protein 1.258895 1.825224 0.9319486 1987 Flagellar biosynthesis pathway, component FliQ [Cell motility and secretion / Intracellular trafficking and secretion] NU flagellar biosynthetic protein FliQ NU TRUE TRUE -27 TRUE 4.440352077 3.3329594997 2.4914469691 0.4706616 2.5195233 Y 2.5451747 0.9958398 16.13265306 0.739321887 0.99571174 0.613627816 0.9984837887 TRUE 0.5 0.9984837887 TRUE 0.9639575070 0.9958398 0.90412320 0.9881948 320372 3990 1064363 1064364 1 327 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 2.067222 2.680701 0.7458642 - - - putative regulator 2.420134 3.273343 0.9738716 789 Predicted transcriptional regulators [Transcription] K transcriptional regulator, MerR family FALSE TRUE -27 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 34.79591837 0.114454644 0.01536016 0.067490996 0.0020121764 FALSE 0.5 0.0020121764 FALSE 0.0028576119 0.4537101 0.02169197 0.2250694 320372 3990 1064365 1064366 1 -7 Same + + 0.00000000 -7.935471e+00 0 -8.409338e+00 NA 1.826667 2.443037 0.8505997 2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] J similar to aklanonic acid methyl transferase 1.506253 2.047989 0.7576455 - - - putative membrane protein TRUE TRUE -27 TRUE 0.130730784 0.1656343233 -0.0371494280 0.4706616 0.1969412 U 0.2044969 0.4668863 5.16836735 0.649941769 0.01536016 0.509729695 0.0281483112 FALSE 0.5 0.0281483112 FALSE 0.0395400201 0.4668863 0.02169197 0.2344554 320372 3990 1064366 1064367 1 158 Same + + 0.00000000 -2.145338e+00 0 -2.726783e+00 NA 1.506253 2.047989 0.7576455 - - - putative membrane protein 1.461945 1.969845 0.7062049 715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] P hypothetical protein TRUE TRUE -26 TRUE 0.130730784 0.0390498336 -0.1023359316 0.4706616 0.1969412 U 0.2044969 0.4560116 29.85714286 0.459489048 0.01536016 0.322510282 0.0130878217 FALSE 0.5 0.0130878217 FALSE 0.0185005310 0.4560116 0.02169197 0.2266924 320372 3990 1064367 1064368 1 15 Same + + 19.74114612 5.323247e+00 0 5.900314e+01 376.7 1.461945 1.969845 0.7062049 715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] P hypothetical protein 1.602390 2.169972 0.7600632 1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter, ATP-binding protein P TRUE TRUE -25 TRUE 2.955559370 2.4594522830 1.9872684917 0.4706616 0.7873368 Y 2.5451747 0.9776648 13.61734694 0.791623505 0.97654940 0.680241058 0.9937186453 TRUE 0.5 0.9937186453 TRUE 0.9660192554 0.9776648 0.88211890 0.9386777 320372 3990 1064368 1064369 1 28 Same + + 34.02667410 1.022178e+01 0 1.610060e+02 376.7 1.602390 2.169972 0.7600632 1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter, ATP-binding protein 1.497449 2.068606 0.7762424 600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] P ABC transporter, permease protein P TRUE TRUE -24 TRUE 3.518473071 2.9095770181 2.3315106386 0.4706616 0.7873368 Y 2.5451747 0.9863733 16.46938776 0.732385880 0.98581914 0.605133623 0.9947712521 TRUE 0.5 0.9947712521 TRUE 0.9579378279 0.9863733 0.89272401 0.9619965 320372 3990 1064369 1064370 1 78 Same + + 4.44521481 -2.734975e+00 0 8.002018e+00 376.7 1.497449 2.068606 0.7762424 600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] P ABC transporter, permease protein 1.502191 2.097516 0.7420186 642 Signal transduction histidine kinase [Signal transduction mechanisms] T sensor kinase protein - TRUE TRUE -23 TRUE 1.095941157 1.5749864130 -0.0977319056 0.4706616 0.7873368 N 0.6473008 0.6889372 23.61734694 0.649384455 0.53652958 0.509117750 0.6819426279 TRUE 0.5 0.6819426279 TRUE 0.6035952262 0.6889372 0.45118929 0.4364658 320372 3990 1064370 1064371 1 11 Same + + 0.00000000 3.452418e+00 0 3.452418e+00 376.7 1.502191 2.097516 0.7420186 642 Signal transduction histidine kinase [Signal transduction mechanisms] T sensor kinase protein 1.473187 2.037849 0.7820419 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK DNA-binding response regulator T TRUE TRUE -22 TRUE 0.130730784 1.2122892684 1.7267089560 0.4706616 0.7873368 Y 2.5451747 0.8949068 12.37244898 0.815295537 0.87945470 0.711962396 0.9698825455 TRUE 0.5 0.9698825455 TRUE 0.9383831961 0.8949068 0.77529064 0.7486074 320372 3990 1064371 1064372 1 40 Same + + 0.00000000 1.876207e-01 0 1.876207e-01 NA 1.473187 2.037849 0.7820419 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK DNA-binding response regulator 7.204908 9.655173 1.1862050 - - - hypothetical protein TRUE TRUE -21 TRUE 0.130730784 0.1934366678 0.4465982423 0.4706616 0.1969412 U 0.2044969 0.5358401 18.45918367 0.697452465 0.11082752 0.563489530 0.2231990456 FALSE 0.5 0.2231990456 FALSE 0.2663464263 0.5358401 0.13605674 0.2876005 320372 3990 1064374 1064375 1 455 Same + + 0.00000000 -9.209246e+01 0 -3.457782e+00 NA 1.434887 1.863151 0.6335067 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M outer membrane porin, putative 1.431229 1.931227 0.6611026 - - - type III DNA modification methyltransferase TRUE TRUE -20 TRUE 0.130730784 0.0586352210 0.3063202906 0.4706616 0.1969412 U 0.2044969 0.5141851 36.61224490 0.055152774 0.03014927 0.031652442 0.0018112995 FALSE 0.5 0.0018112995 FALSE 0.0053706667 0.5141851 0.08467166 0.2701390 320372 3990 1064375 1064376 1 41 Same + + 28.03348117 3.646731e+00 0 3.523253e+01 376.7 1.431229 1.931227 0.6611026 - - - type III DNA modification methyltransferase 1.417185 1.920151 0.6469644 3587 Restriction endonuclease [Defense mechanisms] V type III restriction system endonuclease TRUE TRUE -19 TRUE 3.346469017 2.2503647558 1.7476474206 0.4706616 0.7873368 U 0.2044969 0.9438777 18.65306122 0.694441409 0.93896580 0.559986355 0.9721942009 TRUE 0.5 0.9721942009 TRUE 0.9225972152 0.9438777 0.83986228 0.8546802 320372 3990 1064376 1064377 1 420 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.417185 1.920151 0.6469644 3587 Restriction endonuclease [Defense mechanisms] V type III restriction system endonuclease 6.651678 8.862532 1.1630600 - - - hypothetical protein TRUE TRUE -18 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 36.19897959 0.065738079 0.01536016 0.037908359 0.0010964532 FALSE 0.5 0.0010964532 FALSE 0.0015577393 0.4537101 0.02169197 0.2250694 320372 3990 1064377 1064378 1 -1218 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 6.651678 8.862532 1.1630600 - - - hypothetical protein 1.622395 2.148918 0.7684588 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M outer membrane porin precursor TRUE TRUE -17 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 0.82142857 0.025950702 0.01536016 0.014699650 0.0004154377 FALSE 0.5 0.0004154377 FALSE 0.0005903848 0.4537101 0.02169197 0.2250694 320372 3990 1064378 1064379 1 400 Same + + 0.00000000 -8.476980e+01 0 -6.594962e+00 NA 1.622395 2.148918 0.7684588 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M outer membrane porin precursor 1.617633 2.172255 0.7531949 2207 AraC-type DNA-binding domain-containing proteins [Transcription] K AraC family regulatory protein - TRUE TRUE -16 TRUE 0.130730784 0.1363067436 0.2865260188 0.4706616 0.1969412 N 0.6473008 0.5597121 35.91836735 0.073831784 0.19253156 0.042732377 0.0186531588 FALSE 0.5 0.0186531588 FALSE 0.0184184949 0.5597121 0.19053414 0.3077458 320372 3990 1064382 1064383 1 -3 Same - - 0.00000000 3.844444e-01 0 3.844444e-01 376.7 1.475925 2.091774 0.7809140 411 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E ABC transport system ATP-binding protein 1.749237 2.424673 0.8290753 4177 ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism] E branched chain amino acid ABC transporter, ATP-binding/permease protein E FALSE TRUE -16 TRUE 0.130730784 0.3554427266 0.6538786042 0.4706616 0.7873368 Y 2.5451747 0.8156136 7.22959184 0.838434824 0.76794120 0.743981918 0.9449739478 TRUE 0.5 0.9449739478 TRUE 0.9102279570 0.8156136 0.66145686 0.6073613 320372 3990 1064383 1064384 1 -3 Same - - 0.00000000 3.844444e-01 0 3.844444e-01 332.0 1.749237 2.424673 0.8290753 4177 ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism] E branched chain amino acid ABC transporter, ATP-binding/permease protein 1.415907 1.997679 0.7419001 559 Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism] E Branched-chain amino acid transport system / permease component, putative E FALSE TRUE -17 TRUE 0.130730784 0.3554427266 0.6538786042 0.4706616 1.3510958 Y 2.5451747 0.8439802 7.22959184 0.838434824 0.81024156 0.743981918 0.9568187975 TRUE 0.5 0.9568187975 TRUE 0.9249141476 0.8439802 0.70358757 0.6541819 320372 3990 1064388 1064389 1 56 Same - - 0.00000000 3.844444e-01 0 -1.449284e+00 NA 1.434931 1.949563 0.6852860 1012 NAD-dependent aldehyde dehydrogenases [Energy production and conversion] C phenylacetaldehyde dehydrogenase 1.558485 2.048365 0.8342029 3631 Ketosteroid isomerase-related protein [General function prediction only] R hypothetical protein FALSE TRUE -18 TRUE 0.130730784 -0.0010847874 0.6538786042 0.4706616 0.1969412 U 0.2044969 0.5624221 20.93367347 0.664010171 0.20136808 0.525317582 0.3325777743 FALSE 0.5 0.3325777743 FALSE 0.3259436773 0.5624221 0.19658039 0.3100949 320372 3990 1064389 1064390 1 -96 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.558485 2.048365 0.8342029 3631 Ketosteroid isomerase-related protein [General function prediction only] R hypothetical protein 7.354090 9.806317 1.2081800 - - - hypothetical protein FALSE TRUE -19 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 2.94387755 0.234528858 0.01536016 0.146443451 0.0047567999 FALSE 0.5 0.0047567999 FALSE 0.0067476188 0.4537101 0.02169197 0.2250694 320372 3990 1064390 1064391 1 -889 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 7.354090 9.806317 1.2081800 - - - hypothetical protein 1.505012 1.989605 0.7087243 - - - hypothetical protein FALSE TRUE -20 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 1.37755102 0.051504710 0.01536016 0.029510251 0.0008463738 FALSE 0.5 0.0008463738 FALSE 0.0012025763 0.4537101 0.02169197 0.2250694 320372 3990 1064391 1064392 1 46 Same - - 0.00000000 4.013701e-01 0 4.013701e-01 NA 1.505012 1.989605 0.7087243 - - - hypothetical protein 1.384882 1.912755 0.7388731 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] QR oxidoreductase, short-chain dehydrogenase/reductase family FALSE TRUE -21 TRUE 0.130730784 0.4260778047 0.7384445274 0.4706616 0.1969412 U 0.2044969 0.5797520 19.53571429 0.681091593 0.25592457 0.544614352 0.4234890198 FALSE 0.5 0.4234890198 FALSE 0.3956334483 0.5797520 0.23460557 0.3254323 320372 3990 1064392 1064393 1 -196 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.384882 1.912755 0.7388731 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] QR oxidoreductase, short-chain dehydrogenase/reductase family 7.799553 10.339739 1.2700965 - - - hypothetical protein FALSE TRUE -22 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 2.60204082 0.178811402 0.01536016 0.108681452 0.0033853048 FALSE 0.5 0.0033853048 FALSE 0.0048048960 0.4537101 0.02169197 0.2250694 320372 3990 1064393 1064394 1 -1473 Same - - 0.00000000 1.876207e-01 0 1.876207e-01 NA 7.799553 10.339739 1.2700965 - - - hypothetical protein 1.571014 2.117758 0.7302101 2303 Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] E glucose-methanol-choline (GMC) oxidoreductase family protein FALSE TRUE -23 TRUE 0.130730784 0.1934366678 0.4465982423 0.4706616 0.1969412 U 0.2044969 0.5358401 0.47959184 0.016538693 0.11082752 0.009329180 0.0020916843 FALSE 0.5 0.0020916843 FALSE 0.0026413752 0.5358401 0.13605674 0.2876005 320372 3990 1064398 1064399 1 -606 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 2.889371 3.877313 1.0165134 3239 Fatty acid desaturase [Lipid metabolism] I fatty acid desaturase 1.534352 2.148552 0.7704822 3327 Phenylacetic acid-responsive transcriptional repressor [Transcription] K hypothetical protein - FALSE TRUE -24 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 N 0.6473008 0.5011647 1.87755102 0.089907834 0.01536016 0.052420140 0.0015387270 FALSE 0.5 0.0015387270 FALSE 0.0054797421 0.5011647 0.05282789 0.2599911 320372 3990 1064399 1064400 1 440 Same - - 0.00000000 -6.016297e+01 0 2.434005e-01 NA 1.534352 2.148552 0.7704822 3327 Phenylacetic acid-responsive transcriptional repressor [Transcription] K hypothetical protein 1.591123 2.173618 0.7427632 4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription] K AraC family transcriptional regulator K FALSE TRUE -25 TRUE 0.130730784 0.2154316025 0.1484358101 0.4706616 0.1969412 Y 2.5451747 0.7274280 36.46428571 0.058765711 0.61536856 0.033780964 0.0908171785 FALSE 0.5 0.0908171785 FALSE 0.0631701832 0.7274280 0.51923159 0.4827416 320372 3990 1064401 1064402 1 18 Same + + 0.00000000 6.373508e-03 0 6.373508e-03 376.7 1.513334 2.012632 0.6928046 1960 Acyl-CoA dehydrogenases [Lipid metabolism] I putative acyl-CoA dehydrogenase 1.866218 2.481398 0.8273246 183 Acetyl-CoA acetyltransferase [Lipid metabolism] I beta-ketoadipyl CoA thiolase I TRUE TRUE -25 TRUE 0.130730784 0.0149216732 0.1473445097 0.4706616 0.7873368 Y 2.5451747 0.7651407 14.37755102 0.773784363 0.68492066 0.656998063 0.8814551841 TRUE 0.5 0.8814551841 TRUE 0.8266179142 0.7651407 0.58225573 0.5325539 320372 3990 1064402 1064403 1 13 Same + + 0.00000000 6.373508e-03 0 6.373508e-03 376.7 1.866218 2.481398 0.8273246 183 Acetyl-CoA acetyltransferase [Lipid metabolism] I beta-ketoadipyl CoA thiolase 1.449050 1.978859 0.6754882 1250 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] I fatty oxidation complex, alpha subunit I TRUE TRUE -24 TRUE 0.130730784 0.0149216732 0.1473445097 0.4706616 0.7873368 Y 2.5451747 0.7651407 12.91836735 0.806547220 0.68492066 0.700120015 0.9006267125 TRUE 0.5 0.9006267125 TRUE 0.8531807613 0.7651407 0.58225573 0.5325539 320372 3990 1064403 1064404 1 396 Same + + 9.46743106 -6.022725e+01 0 -7.429916e+00 376.7 1.449050 1.978859 0.6754882 1250 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] I fatty oxidation complex, alpha subunit 1.562229 2.090837 0.7179991 1804 Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion] C alpha-methylacyl-CoA racemase - TRUE TRUE -23 TRUE 2.069139191 0.1511649190 0.1488103309 0.4706616 0.7873368 N 0.6473008 0.7940686 35.85204082 0.075856243 0.73379383 0.043944554 0.1845122407 FALSE 0.5 0.1845122407 FALSE 0.1218588984 0.7940686 0.62833584 0.5741867 320372 3990 1064405 1064406 1 336 Same - - 0.00000000 -1.768040e+01 0 5.478664e-02 NA 1.624475 2.162478 0.8210252 - - - putative lipoprotein 2.539320 3.314538 0.9265600 4520 Surface antigen [Cell envelope biogenesis, outer membrane] M putative membrane protein FALSE TRUE -23 TRUE 0.130730784 0.1052043923 0.0201349847 0.4706616 0.1969412 U 0.2044969 0.4741917 34.92857143 0.108846527 0.01536016 0.064017677 0.0019017506 FALSE 0.5 0.0019017506 FALSE 0.0027009152 0.4741917 0.02169197 0.2397595 320372 3990 1064407 1064408 1 -13 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 2.304891 3.020012 0.9068672 - - - hypothetical protein 1.591648 2.106910 0.8266061 - - - putative lipoprotein TRUE TRUE -23 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 4.51530612 0.539832678 0.01536016 0.396471166 0.0179715551 FALSE 0.5 0.0179715551 FALSE 0.0253521378 0.4537101 0.02169197 0.2250694 320372 3990 1064409 1064410 1 -3 Same - - 4.44687761 2.388877e+00 0 2.796288e+01 NA 1.846169 2.552497 0.8792167 5662 Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription] K transmembrane regulator PrtR 1.715423 2.435888 0.9505441 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K ECF sigma factor PrtI K FALSE TRUE -23 TRUE 1.098602738 2.1514371773 1.4451768588 0.4706616 0.1969412 Y 2.5451747 0.9095915 7.22959184 0.838434824 0.89797270 0.743981918 0.9785747579 TRUE 0.5 0.9785747579 TRUE 0.9526860729 0.9095915 0.79508480 0.7786789 320372 3990 1064411 1064412 1 0 Same + + 8.86139884 2.624256e+00 0 3.867082e+01 334.0 1.908089 2.554361 0.8041128 753 Catalase [Inorganic ion transport and metabolism] P catalase 2.995232 4.242241 0.8907994 3038 Cytochrome B561 [Energy production and conversion] C cytochrome B561 - TRUE TRUE -23 TRUE 1.985938756 2.3075797233 1.5113069147 0.4706616 0.9894973 N 0.6473008 0.9062357 9.36224490 0.868052223 0.89379377 0.786505072 0.9822583247 TRUE 0.5 0.9822583247 TRUE 0.9612967469 0.9062357 0.79059470 0.7716835 320372 3990 1064412 1064413 1 2060 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 376.7 2.995232 4.242241 0.8907994 3038 Cytochrome B561 [Energy production and conversion] C cytochrome B561 2.395888 3.216946 0.9649792 - - - IS407A, transposase OrfA TRUE TRUE -22 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.7873368 U 0.2044969 0.5062636 40.12244898 0.010776673 0.01536016 0.006063442 0.0001699162 FALSE 0.5 0.0001699162 FALSE 0.0007615646 0.5062636 0.06538526 0.2639346 320372 3990 1064413 1064414 1 24 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 201.0 2.395888 3.216946 0.9649792 - - - IS407A, transposase OrfA 2.752751 3.716828 0.9702926 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L IS407A, transposase OrfB TRUE TRUE -21 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 1.8617409 U 0.2044969 0.6007459 15.71938776 0.747701431 0.31779941 0.623992907 0.5799302853 TRUE 0.5 0.5799302853 TRUE 0.5344782282 0.6007459 0.27923520 0.3447722 320372 3990 1064415 1064416 1 188 Same - - 100.06746594 1.986655e+01 0 9.568280e+01 376.7 1.448502 1.948654 0.6387197 187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] L DNA gyrase, B subunit 1.403520 1.915159 0.6920244 592 DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] L DNA polymerase III, beta subunit L FALSE TRUE -21 TRUE 4.402411056 2.6713853048 2.9790663020 0.4706616 0.7873368 Y 2.5451747 0.9938331 31.16836735 0.354875057 0.99363046 0.235495196 0.9884808606 TRUE 0.5 0.9884808606 TRUE 0.8346270507 0.9938331 0.90171792 0.9825652 320372 3990 1064416 1064417 1 163 Same - - 38.20200518 7.299202e+00 0 3.009215e+02 376.7 1.403520 1.915159 0.6920244 592 DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] L DNA polymerase III, beta subunit 1.538229 2.053462 0.7136885 593 ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] L chromosomal replication initiator protein DnaA L FALSE TRUE -22 TRUE 3.642593956 3.1995687330 2.1602052777 0.4706616 0.7873368 Y 2.5451747 0.9861106 30.08163265 0.443397471 0.98554189 0.308478015 0.9819173000 TRUE 0.5 0.9819173000 TRUE 0.8685466186 0.9861106 0.89240576 0.9612822 320372 3990 1064418 1064419 1 80 Same + + 3.10749724 2.994821e+00 0 2.316415e+01 NA 2.625333 3.550998 1.0567794 594 RNase P protein component [Translation, ribosomal structure and biogenesis] J ribonuclease P protein component 3.105909 4.189538 1.1130396 759 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein TIGR00278 TRUE TRUE -22 TRUE 0.748202005 2.0741283650 1.6202639963 0.4706616 0.1969412 U 0.2044969 0.7722947 23.85204082 0.650723158 0.69734787 0.510588386 0.8110611120 TRUE 0.5 0.8110611120 TRUE 0.7314583645 0.7722947 0.59382846 0.5425569 320372 3990 1064419 1064420 1 9 Same + + 45.53999103 7.479888e+00 0 1.902642e+02 NA 3.105909 4.189538 1.1130396 759 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein TIGR00278 1.382888 1.848717 0.6115785 706 Preprotein translocase subunit YidC [Intracellular trafficking and secretion] U inner membrane protein, 60 kDa TRUE TRUE -21 TRUE 3.777544490 2.9731097999 2.1725280114 0.4706616 0.1969412 U 0.2044969 0.9572470 11.97959184 0.823332663 0.95415457 0.722968063 0.9897952204 TRUE 0.5 0.9897952204 TRUE 0.9653782675 0.9572470 0.85679808 0.8867484 320372 3990 1064421 1064422 1 -540 Same - - 0.00000000 2.648063e-01 0 2.648063e-01 NA 5.363931 7.366176 1.1309034 - - - hypothetical protein 2.464911 3.404310 0.9433049 - - - hypothetical protein FALSE TRUE -21 TRUE 0.130730784 0.2219044377 0.4977461055 0.4706616 0.1969412 U 0.2044969 0.5434337 2.01530612 0.103652623 0.13759580 0.060816916 0.0181158417 FALSE 0.5 0.0181158417 FALSE 0.0205582435 0.5434337 0.15362631 0.2939037 320372 3990 1064423 1064424 1 154 Same + + 2.67965073 -4.180195e+00 0 -8.813943e+00 376.7 2.004214 2.755568 0.8391917 486 Predicted GTPase [General function prediction only] R tRNA modification GTPase TrmE 3.253207 4.373535 1.0388024 4974 Site-specific recombinase XerD [DNA replication, recombination, and repair] L Integrase or site-specific recombinase TRUE TRUE -21 TRUE 0.606661097 0.1728039970 -0.0794025796 0.4706616 0.7873368 U 0.2044969 0.5730219 29.65306122 0.473798812 0.23512956 0.335199658 0.2167901843 FALSE 0.5 0.2167901843 FALSE 0.2024987777 0.5730219 0.21996872 0.3194106 320372 3990 1064425 1064426 1 125 Same - - 0.00000000 6.330130e-02 0 6.330130e-02 NA 1.880531 2.520481 0.8286684 5519 Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair] L inner membrane protein 2.176013 2.967636 0.9266947 - - - hypothetical protein FALSE TRUE -21 TRUE 0.130730784 0.1159305057 0.2796411229 0.4706616 0.1969412 U 0.2044969 0.5111605 27.87755102 0.579987225 0.01833652 0.436067229 0.0251449251 FALSE 0.5 0.0251449251 FALSE 0.1037402794 0.5111605 0.07733920 0.2677587 320372 3990 1064426 1064427 1 791 Same - - 0.00000000 -3.597439e+01 0 1.166161e-01 NA 2.176013 2.967636 0.9266947 - - - hypothetical protein 2.092931 2.934426 0.9862666 - - - hypothetical protein FALSE TRUE -22 TRUE 0.130730784 0.1337433577 0.0738261484 0.4706616 0.1969412 U 0.2044969 0.4821802 38.82653061 0.020176937 0.01536016 0.011399832 0.0003211340 FALSE 0.5 0.0003211340 FALSE 0.0004563865 0.4821802 0.02169197 0.2456437 320372 3990 1064427 1064428 1 3593 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 2.092931 2.934426 0.9862666 - - - hypothetical protein 2.790802 3.769328 0.9719259 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L IS407A, transposase OrfB FALSE TRUE -23 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 40.27551020 0.009980333 0.01536016 0.005613409 0.0001572357 FALSE 0.5 0.0001572357 FALSE 0.0002234743 0.4537101 0.02169197 0.2250694 320372 3990 1064428 1064429 1 24 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 201.0 2.790802 3.769328 0.9719259 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L IS407A, transposase OrfB 2.378251 3.193265 0.9770515 - - - IS407A, transposase OrfA FALSE TRUE -24 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 1.8617409 U 0.2044969 0.6007459 15.71938776 0.747701431 0.31779941 0.623992907 0.5799302853 TRUE 0.5 0.5799302853 TRUE 0.5344782282 0.6007459 0.27923520 0.3447722 320372 3990 1064429 1064430 1 299 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 2.378251 3.193265 0.9770515 - - - IS407A, transposase OrfA 3.852010 5.142024 1.0514541 - - - putative lipoprotein FALSE TRUE -25 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 34.21428571 0.141886512 0.01536016 0.084744036 0.0025727395 FALSE 0.5 0.0025727395 FALSE 0.0036528390 0.4537101 0.02169197 0.2250694 320372 3990 1064433 1064434 1 487 Same + + 0.00000000 -5.535782e+01 0 1.253097e+00 NA 2.765872 3.669807 0.9744560 1670 Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis] J spermidine n(1)-acetyltransferase 2.210871 2.926975 0.9564450 - - - hypothetical protein TRUE TRUE -25 TRUE 0.130730784 0.6687132513 0.1325595035 0.4706616 0.1969412 U 0.2044969 0.4976275 37.07142857 0.045121508 0.01536016 0.025778832 0.0007366033 FALSE 0.5 0.0007366033 FALSE 0.0021727096 0.4976275 0.04405001 0.2572782 320372 3990 1064438 1064439 1 -93 Same + + 0.00000000 2.398793e+00 0 -3.448128e+00 376.7 1.974166 2.656570 0.8771982 2169 Adenosine deaminase [Nucleotide transport and metabolism] F O6-methylguanine-DNA methyltransferase 1.945005 2.633137 0.8878310 122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair] L DNA-3-methyladenine glycosylase II - TRUE TRUE -24 TRUE 0.130730784 0.0583208888 1.4496927942 0.4706616 0.7873368 N 0.6473008 0.7516236 2.96428571 0.238101343 0.66079402 0.148935230 0.3784146846 FALSE 0.5 0.3784146846 FALSE 0.2846110110 0.7516236 0.56006210 0.5141505 320372 3990 1064439 1064440 1 126 Same + + 0.00000000 -1.104400e+01 0 -2.815186e+00 376.7 1.945005 2.633137 0.8878310 122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair] L DNA-3-methyladenine glycosylase II 1.610678 2.188924 0.7514623 2918 Gamma-glutamylcysteine synthetase [Coenzyme metabolism] H glutamate--cysteine ligase - TRUE TRUE -23 TRUE 0.130730784 0.0411394187 -0.0133001946 0.4706616 0.7873368 N 0.6473008 0.5684113 27.93877551 0.576978694 0.22059913 0.433035551 0.2785238704 FALSE 0.5 0.2785238704 FALSE 0.2659109910 0.5684113 0.20984641 0.3153335 320372 3990 1064441 1064442 1 263 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 1.843915 2.525167 0.8620375 568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] K RNA polymerase sigma factor 2.276793 3.152524 0.9771986 - - - hypothetical protein FALSE TRUE -23 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 33.42857143 0.185828992 0.01536016 0.113326565 0.0035479089 FALSE 0.5 0.0035479089 FALSE 0.0050353417 0.4537101 0.02169197 0.2250694 320372 3990 1064444 1064445 1 103 Same - - 0.00000000 3.780709e-01 0 3.780709e-01 NA 1.982521 2.570688 0.8622384 3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein [Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism] UNTP hypothetical protein 1.608731 2.236635 0.7893430 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family - FALSE TRUE -24 TRUE 0.130730784 0.3268333579 0.6274056342 0.4706616 0.1969412 N 0.6473008 0.6091532 26.27551020 0.627745790 0.34138200 0.485678604 0.4664048684 FALSE 0.5 0.4664048684 FALSE 0.4156678721 0.6091532 0.29668346 0.3527623 320372 3990 1064446 1064447 1 -604 Same + + 0.00000000 0.000000e+00 0 0.000000e+00 NA 4.763087 6.348198 1.1175806 - - - hypothetical protein 1.618971 2.147324 0.7598247 687 Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism] E ABC transporter, periplasmic substrate-binding protein TRUE TRUE -24 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 1.89285714 0.091363320 0.01536016 0.053304295 0.0015660987 FALSE 0.5 0.0015660987 FALSE 0.0022245281 0.4537101 0.02169197 0.2250694 320372 3990 1064447 1064448 1 89 Same + + 0.00000000 3.949966e-01 0 3.132859e-02 NA 1.618971 2.147324 0.7598247 687 Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism] E ABC transporter, periplasmic substrate-binding protein 1.641645 2.229147 0.7680932 123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] BQ histone deacetylase family protein - TRUE TRUE -23 TRUE 0.130730784 0.0851368783 0.6950234746 0.4706616 0.1969412 N 0.6473008 0.6152193 24.85714286 0.651071218 0.35799717 0.510971146 0.5099195932 TRUE 0.5 0.5099195932 TRUE 0.4550082322 0.6152193 0.30912645 0.3586179 320372 3990 1064450 1064451 1 999 Same + + 0.00000000 -4.873916e+01 0 -3.833092e+01 NA 1.788538 2.373746 0.7951038 388 Predicted amidohydrolase [General function prediction only] R hydrolase, carbon-nitrogen family 1.652267 2.205805 0.7644679 5518 Bacteriophage capsid portal protein [General function prediction only] R Phage portal protein TRUE TRUE -22 TRUE 0.130730784 0.3204214059 0.1192550630 0.4706616 0.1969412 U 0.2044969 0.4911073 39.35714286 0.015676069 0.01536016 0.008839210 0.0002483759 FALSE 0.5 0.0002483759 FALSE 0.0004539123 0.4911073 0.02772423 0.2523255 320372 3990 1064452 1064453 1 -3 Same - - 0.00000000 2.225311e-01 0 2.225311e-01 NA 2.180591 3.087487 1.0060369 - - - putative membrane protein 2.941890 3.854627 0.9670885 - - - hypothetical protein FALSE TRUE -22 TRUE 0.130730784 0.2090663146 0.4758362087 0.4706616 0.1969412 U 0.2044969 0.5401746 7.22959184 0.838434824 0.12619943 0.743981918 0.4284052803 FALSE 0.5 0.4284052803 FALSE 0.4703385789 0.5401746 0.14611365 0.2911867 320372 3990 1064453 1064454 1 3755 Same - - 0.00000000 0.000000e+00 0 0.000000e+00 NA 2.941890 3.854627 0.9670885 - - - hypothetical protein NA NA NA FALSE TRUE -23 TRUE 0.130730784 -0.1325493107 -0.1026061441 0.4706616 0.1969412 U 0.2044969 0.4537101 40.28571429 0.009929149 0.01536016 0.005584494 0.0001564213 FALSE 0.5 0.0001564213 FALSE 0.0002223170 0.4537101 0.02169197 0.2250694 320372 3990 1064455 1064456 1 38 Same + + 0.00000000 3.953468e+00 0 3.929937e+00 376.7 2.517943 3.566224 1.0601989 2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism] Q thioesterase family protein 1.562165 2.110446 0.7601676 - - - Patatin-like phospholipase family protein TRUE TRUE -23 TRUE 0.130730784 1.2632835124 1.7986448733 0.4706616 0.7873368 U 0.2044969 0.7648127 18.13775510 0.702502370 0.68434528 0.569394940 0.8365878679 TRUE 0.5 0.8365878679 TRUE 0.7665782581 0.7648127 0.58172225 0.5320997 320372 3990 1064459 1064460 1 103 Same - - 0.00000000 -2.723595e-01 0 -7.041420e-01 NA 1.523851 2.023738 0.6786166 550 Topoisomerase IA [DNA replication, recombination, and repair] L DNA topoisomerase III 2.013643 2.752637 0.9137320 - - - putative thioredoxin FALSE TRUE -23 TRUE 0.130730784 -0.0274062502 -0.1289959480 0.4706616 0.1969412 U 0.2044969 0.4513821 26.27551020 0.627745790 0.01536016 0.485678604 0.0256321670 FALSE 0.5 0.0256321670 FALSE 0.0360433503 0.4513821 0.02169197 0.2234347 320372 3990 1064460 1064461 1 60 Same - - 0.00000000 2.221964e+00 0 1.790182e+00 NA 2.013643 2.752637 0.9137320 - - - putative thioredoxin 1.909668 2.626036 0.8697405 758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion] LU SMF family protein FALSE TRUE -24 TRUE 0.130730784 0.8048253398 1.3981589784 0.4706616 0.1969412 U 0.2044969 0.6718648 21.52551020 0.659820504 0.49866913 0.520646967 0.6586245878 TRUE 0.5 0.6586245878 TRUE 0.5838444513 0.6718648 0.41972097 0.4172575 320372 3990 1064462 1064463 1 32 Same + + 113.57472502 8.591319e+00 0 6.168023e+02 70.0 1.878548 2.573175 0.8957098 242 N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis] J peptide deformylase 1.665320 2.264746 0.7637059 223 Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis] J methionyl-tRNA formyltransferase J TRUE TRUE -24 TRUE 4.483229316 3.4625178495 2.2402057250 0.4706616 2.4550179 Y 2.5451747 0.9952307 17.00510204 0.721662212 0.99508089 0.592150399 0.9980969967 TRUE 0.5 0.9980969967 TRUE 0.9603891958 0.9952307 0.90339374 0.9864816 320372 3990 1064463 1064464 1 121 Same + + 0.00000000 8.182292e-01 0 -1.011314e+01 376.7 1.665320 2.264746 0.7637059 223 Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis] J methionyl-tRNA formyltransferase 1.769692 2.428114 0.8747810 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E homoserine/homoserine lactone efflux protein - TRUE TRUE -23 TRUE 0.130730784 0.1898631135 0.9120040113 0.4706616 0.7873368 N 0.6473008 0.6918690 27.63775510 0.591205668 0.54284331 0.447467639 0.6319860115 TRUE 0.5 0.6319860115 TRUE 0.5484864148 0.6918690 0.45651148 0.4398424 320372 3990 1064464 1064465 1 110 Same + + 0.00000000 2.876929e+00 0 -5.155738e+00 376.7 1.769692 2.428114 0.8747810 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E homoserine/homoserine lactone efflux protein 1.724840 2.272310 0.7529873 501 Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] O HtpX-2 endopeptidase - TRUE TRUE -22 TRUE 0.130730784 0.1042811470 1.5917996976 0.4706616 0.7873368 N 0.6473008 0.7668223 26.92346939 0.614921571 0.68786255 0.472076121 0.7787149041 TRUE 0.5 0.7787149041 TRUE 0.6923919440 0.7668223 0.58498658 0.5348885 320372 3990 1064465 1064466 1 338 Same + + 7.75732484 -7.107742e+01 0 2.480146e+01 376.7 1.724840 2.272310 0.7529873 501 Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] O HtpX-2 endopeptidase 2.165376 2.938933 0.9073435 144 tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] J ribosomal RNA small subunit methyltransferase B - TRUE TRUE -21 TRUE 1.823685335 2.1077655098 0.2036270608 0.4706616 0.7873368 N 0.6473008 0.7959574 34.97959184 0.106753636 0.73686141 0.062726079 0.2507493473 FALSE 0.5 0.2507493473 FALSE 0.1698587444 0.7959574 0.63127955 0.5770180 320372 3990 1064466 1064467 1 -3 Same + + 8.22814113 1.651610e+01 0 3.657884e+01 NA 2.165376 2.938933 0.9073435 144 tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] J ribosomal RNA small subunit methyltransferase B 1.690700 2.339167 0.8680768 - - - hypothetical protein TRUE TRUE -20 TRUE 1.875007520 2.2738236062 2.6240782555 0.4706616 0.1969412 U 0.2044969 0.9144842 7.22959184 0.838434824 0.90401048 0.74