Taxon Scaffold Gene1 Gene2 Consecutive Sep Code Strand1 Strand2 GNScore GNWithin GNAll GNMinus GOScore CAI CAI.Alm CBI COG COGanno COGfun Description nCAI nCAI.Alm nCBI nCOG nCOGanno nCOGfun nDescription COGsim forward forwardplus sumBias same bbfGNScore bbfGNMinus bbfGNWithin bbfGNAll bbfGOScore COGsimClass cfCOG pSame groupIndexD pSameD pOpLogistic pOpDistance pOp1 bOp1 pCAI pOp bOp pOp2 pSame pOpLogisticLike pOpLogisticM 322710 11331 2255327 2255328 1 -3 Same + + 4.7212479 -7.116060043 0 8.479773e-01 318.5 3.839045 5.010113 1.0286669 418 Dihydroorotase [Nucleotide transport and metabolism] F Dihydroorotase homodimeric type 3.596213 4.699061 0.9973402 847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] L Ribonuclease T - FALSE FALSE 0 TRUE 0.8625979864 0.8614463 0.2591101 0.8039394 0.9001864 N 0.7317929 0.6535425 6.87500000 0.86429110 0.42046816 0.86932250 0.822086131 TRUE 0.5 0.822086131 TRUE 0.732229976 0.6535425 0.30039212 0.4685272 322710 11331 2255328 2255329 1 147 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 3.596213 4.699061 0.9973402 847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] L Ribonuclease T 6.138819 8.393750 1.1611322 - - - hypothetical protein FALSE FALSE 1 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 31.36363636 0.27183312 0.14493487 0.28054545 0.059511208 FALSE 0.5 0.059511208 FALSE 0.051131032 0.5611155 0.12613896 0.3740187 322710 11331 2255329 2255330 1 99 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 6.138819 8.393750 1.1611322 - - - hypothetical protein 2.973051 3.735113 0.9741584 2193 Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism] P Bacterioferritin FALSE FALSE 2 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 27.40340909 0.43734837 0.14493487 0.44810103 0.116415239 FALSE 0.5 0.116415239 FALSE 0.100881540 0.5611155 0.12613896 0.3740187 322710 11331 2255330 2255331 1 -7 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.973051 3.735113 0.9741584 2193 Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism] P Bacterioferritin 5.969081 8.177139 1.1014789 - - - hypothetical protein FALSE FALSE 3 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 4.01704545 0.78535787 0.14493487 0.79261353 0.382789292 FALSE 0.5 0.382789292 FALSE 0.345615134 0.5611155 0.12613896 0.3740187 322710 11331 2255333 2255334 1 -81 Same + + 0.0000000 4.472521495 0 -1.222596e+00 318.5 2.597855 3.393626 0.9521494 78 Ornithine carbamoyltransferase [Amino acid transport and metabolism] E Ornithine carbamoyltransferase 2.595377 3.448424 0.9503772 3842 ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] E ABC transporter:TOBE domain E FALSE FALSE 4 TRUE 0.3922770566 0.2017943 1.4199487 0.8039394 0.9001864 Y 2.4007771 0.8439507 1.54545455 0.56183199 0.79786300 0.57253091 0.835014519 TRUE 0.5 0.835014519 TRUE 0.698041967 0.8439507 0.64322534 0.7165104 322710 11331 2255337 2255338 1 125 Same - - 0.0000000 -7.777093306 0 -8.839866e+00 318.5 2.266550 3.113373 0.9489256 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] R Alpha/beta hydrolase fold 2.108787 2.799904 0.8764105 620 Methionine synthase II (cobalamin-independent) [Amino acid transport and metabolism] E 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase TRUE FALSE 4 TRUE 0.3922770566 0.2578201 0.2653873 0.8039394 0.9001864 U 0.5877867 0.5804263 29.60795455 0.35810575 0.20975389 0.36818504 0.128980314 FALSE 0.5 0.128980314 FALSE 0.097989963 0.5804263 0.16298752 0.3926512 322710 11331 2255339 2255340 1 55 Same + + 0.0000000 -14.890641148 0 -1.781086e+01 NA 2.079214 2.788030 0.8898059 583 Transcriptional regulator [Transcription] K regulatory protein, LysR:LysR substrate binding domain 1.696354 2.273749 0.7681732 744 Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane] M Glycosyl transferase, family 51 - FALSE FALSE 4 TRUE 0.3922770566 0.3043030 0.3092545 0.8039394 0.5921955 N 0.7317929 0.5771575 22.60227273 0.49606706 0.19908692 0.50696260 0.196590283 FALSE 0.5 0.196590283 FALSE 0.154698339 0.5771575 0.15676677 0.3894583 322710 11331 2255341 2255342 1 70 Same - - 0.0000000 -13.393863984 0 -1.247315e+01 318.5 1.791507 2.376274 0.7878380 4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] C delta-1-pyrroline-5-carboxylate dehydrogenase 3 1.603617 2.127048 0.7300401 1629 Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism] P TonB-dependent receptor - TRUE FALSE 4 TRUE 0.3922770566 0.2780227 0.2998386 0.8039394 0.9001864 N 0.7317929 0.6005840 24.34090909 0.48590356 0.27296925 0.49679594 0.261920533 FALSE 0.5 0.261920533 FALSE 0.192288972 0.6005840 0.20120110 0.4127021 322710 11331 2255343 2255344 1 214 Same + + 0.0000000 0.009936207 0 9.936207e-03 318.5 1.476420 1.954739 0.6636072 466 ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] O Peptidase S16, ATP-dependent protease La 1.788159 2.367983 0.8056987 2610 H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism] GE integral membrane permease - FALSE FALSE 4 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.9001864 N 0.7317929 0.6505104 34.55681818 0.12631809 0.41267139 0.13120698 0.092218247 FALSE 0.5 0.092218247 FALSE 0.056985114 0.6505104 0.29475955 0.4652009 322710 11331 2255344 2255345 1 24 Same + + 0.0000000 -0.831299309 0 -2.034662e+00 318.5 1.788159 2.367983 0.8056987 2610 H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism] GE integral membrane permease 1.589717 2.119758 0.7501838 1454 Alcohol dehydrogenase, class IV [Energy production and conversion] C Iron-containing alcohol dehydrogenase - FALSE FALSE 5 TRUE 0.3922770566 0.2072581 0.2231388 0.8039394 0.9001864 N 0.7317929 0.5886291 18.52272727 0.66245694 0.23600060 0.67213269 0.377430182 FALSE 0.5 0.377430182 FALSE 0.299052657 0.5886291 0.17856860 0.4007348 322710 11331 2255345 2255346 1 45 Same + + 1.1921383 -1.708062476 0 -1.553371e+00 318.5 1.589717 2.119758 0.7501838 1454 Alcohol dehydrogenase, class IV [Energy production and conversion] C Iron-containing alcohol dehydrogenase 1.535290 2.030991 0.6990007 1012 NAD-dependent aldehyde dehydrogenases [Energy production and conversion] C Aldehyde dehydrogenase C FALSE FALSE 6 TRUE -0.0796516844 0.2039844 0.2229941 0.8039394 0.9001864 Y 2.4007771 0.7171155 21.43750000 0.53044280 0.56875794 0.54128238 0.598377057 TRUE 0.5 0.598377057 TRUE 0.447122219 0.7171155 0.41721249 0.5422722 322710 11331 2255348 2255349 1 32 Same + + 0.0000000 -8.259260519 0 -5.300249e+00 NA 1.584781 2.219690 0.8722760 5513 Predicted secreted protein [Function unknown] S conserved hypothetical protein 1.787755 2.402521 0.8389089 2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] H Proteobacterial methyltransferase FALSE FALSE 7 TRUE 0.3922770566 0.2338122 0.2687541 0.8039394 0.5921955 U 0.5877867 0.5539993 19.82954545 0.58618510 0.11990936 0.59671621 0.161776107 FALSE 0.5 0.161776107 FALSE 0.152227578 0.5539993 0.11250028 0.3672896 322710 11331 2255349 2255350 1 -3 Same + + 22.3239797 126.479853538 0 1.583236e+02 NA 1.787755 2.402521 0.8389089 2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] H Proteobacterial methyltransferase 1.844504 2.464074 0.8515240 - - - Methyltransferase, putative FALSE FALSE 8 TRUE 3.3257692257 2.9791831 3.3866431 0.8039394 0.5921955 U 0.5877867 0.9603005 6.87500000 0.86429110 0.95480620 0.86932250 0.992622722 TRUE 0.5 0.992622722 TRUE 0.971521686 0.9603005 0.84268237 0.9187291 322710 11331 2255350 2255351 1 34 Same + + 0.0000000 -0.679333497 0 -1.180813e+00 NA 1.844504 2.464074 0.8515240 - - - Methyltransferase, putative 1.646269 2.127425 0.9587478 - - - conserved hypothetical protein FALSE FALSE 9 TRUE 0.3922770566 0.2013728 0.2234022 0.8039394 0.5921955 U 0.5877867 0.5471062 20.07954545 0.57625868 0.09504727 0.58686436 0.124981977 FALSE 0.5 0.124981977 FALSE 0.130327967 0.5471062 0.09925807 0.3608401 322710 11331 2255352 2255353 1 -7 Same - - 13.4838262 124.809833056 0 2.146056e+02 318.5 1.900351 2.490380 0.8318032 854 Pyridoxal phosphate biosynthesis protein [Coenzyme metabolism] H Pyridoxal phosphate biosynthetic protein PdxJ 2.879208 3.986408 1.0576028 1381 Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] L Recombination protein O, RecO - TRUE FALSE 9 TRUE 2.3082193832 3.1968033 3.3649766 0.8039394 0.9001864 N 0.7317929 0.9543450 4.01704545 0.78535787 0.94770213 0.79261353 0.985142067 TRUE 0.5 0.985142067 TRUE 0.947929742 0.9543450 0.83264904 0.9071403 322710 11331 2255353 2255354 1 213 Same - - 0.0000000 0.009936207 0 9.936207e-03 318.5 2.879208 3.986408 1.0576028 1381 Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] L Recombination protein O, RecO 3.422823 4.656169 1.0476267 - - - Hemolysin-type calcium-binding region TRUE FALSE 8 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.9001864 U 0.5877867 0.6360767 34.50568182 0.12822044 0.37453725 0.13317174 0.080944250 FALSE 0.5 0.080944250 FALSE 0.051064893 0.6360767 0.26786976 0.4495896 322710 11331 2255354 2255355 1 305 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 3.422823 4.656169 1.0476267 - - - Hemolysin-type calcium-binding region 8.873238 12.272289 1.1504211 - - - hypothetical protein TRUE FALSE 7 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 36.96022727 0.05698685 0.14493487 0.05937477 0.010139224 FALSE 0.5 0.010139224 FALSE 0.008647526 0.5611155 0.12613896 0.3740187 322710 11331 2255357 2255358 1 -13 Same - - 68.2313852 269.832733663 0 4.256762e+02 318.5 2.573652 3.349244 0.9378920 1159 GTPase [General function prediction only] R Small GTP-binding protein domain:GTP-binding domain:GTP-binding protein Era 2.921127 3.844158 1.0255654 571 dsRNA-specific ribonuclease [Transcription] K Ribonuclease III TRUE FALSE 6 TRUE 4.8823531770 3.6948144 3.8717025 0.8039394 0.9001864 U 0.5877867 0.9846864 3.16477273 0.73264901 0.98299876 0.74109904 0.993728361 TRUE 0.5 0.993728361 TRUE 0.954121826 0.9846864 0.88357177 0.9677943 322710 11331 2255358 2255359 1 -3 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 2.921127 3.844158 1.0255654 571 dsRNA-specific ribonuclease [Transcription] K Ribonuclease III 3.492434 4.614493 1.1119144 - - - conserved hypothetical protein TRUE FALSE 5 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 6.87500000 0.86429110 0.30486020 0.86932250 0.736360616 TRUE 0.5 0.736360616 TRUE 0.644254000 0.6112941 0.22140087 0.4236152 322710 11331 2255359 2255360 1 21 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 3.492434 4.614493 1.1119144 - - - conserved hypothetical protein 4.296724 5.782010 1.0537478 - - - hypothetical protein TRUE FALSE 4 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 18.03977273 0.68823353 0.30486020 0.69750778 0.491904235 FALSE 0.5 0.491904235 FALSE 0.385646916 0.6112941 0.22140087 0.4236152 322710 11331 2255360 2255361 1 14 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 4.296724 5.782010 1.0537478 - - - hypothetical protein 2.946353 3.977233 1.0121442 681 Signal peptidase I [Intracellular trafficking and secretion] U Signal peptidase I TRUE FALSE 3 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 16.61931818 0.72303227 0.30486020 0.73167494 0.533771798 TRUE 0.5 0.533771798 TRUE 0.426054171 0.6112941 0.22140087 0.4236152 322710 11331 2255361 2255362 1 5 Same - - 41.1307515 167.626258519 0 3.321856e+02 318.5 2.946353 3.977233 1.0121442 681 Signal peptidase I [Intracellular trafficking and secretion] U Signal peptidase I 2.902820 3.816902 0.9509957 481 Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] M Small GTP-binding protein domain:GTP-binding protein LepA - TRUE FALSE 2 TRUE 4.2330213908 3.5516474 3.6474606 0.8039394 0.9001864 N 0.7317929 0.9796872 13.43181818 0.74346223 0.97733351 0.75168633 0.992060883 TRUE 0.5 0.992060883 TRUE 0.953109514 0.9796872 0.87521452 0.9575185 322710 11331 2255362 2255363 1 149 Same - - 14.9110410 -12.896331090 0 7.029512e+01 318.5 2.902820 3.816902 0.9509957 481 Membrane GTPase LepA [Cell envelope biogenesis, outer membrane] M Small GTP-binding protein domain:GTP-binding protein LepA 3.856854 5.200823 1.0920632 265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones] O Peptidase S1, chymotrypsin:PDZ/DHR/GLGF domain - TRUE FALSE 1 TRUE 2.5411197737 2.3520265 0.2968208 0.8039394 0.9001864 N 0.7317929 0.8089877 31.53409091 0.26294112 0.74188064 0.27147471 0.506256825 TRUE 0.5 0.506256825 TRUE 0.331720794 0.8089877 0.58183851 0.6643501 322710 11331 2255363 2255364 1 12 Same - - 10.0658778 -7.030080159 0 1.817070e+00 NA 3.856854 5.200823 1.0920632 265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones] O Peptidase S1, chymotrypsin:PDZ/DHR/GLGF domain 4.675742 6.343864 1.1433039 3086 Positive regulator of sigma E activity [Signal transduction mechanisms] T Positive regulator of sigma(E), RseC/MucC - TRUE FALSE 0 TRUE 1.8310237421 0.9556431 0.2587240 0.8039394 0.5921955 N 0.7317929 0.7036808 15.71590909 0.73364663 0.53965309 0.74207623 0.763533373 TRUE 0.5 0.763533373 TRUE 0.640454538 0.7036808 0.39272644 0.5260221 322710 11331 2255364 2255365 1 -3 Same - - 5.9146130 115.145474995 0 1.269724e+02 NA 4.675742 6.343864 1.1433039 3086 Positive regulator of sigma E activity [Signal transduction mechanisms] T Positive regulator of sigma(E), RseC/MucC 4.366059 5.965692 1.0789580 3026 Negative regulator of sigma E activity [Signal transduction mechanisms] T MucB/RseB T TRUE FALSE -1 TRUE 1.1539427789 2.8146086 3.2412859 0.8039394 0.5921955 Y 2.4007771 0.9592420 6.87500000 0.86429110 0.95354993 0.86932250 0.992409296 TRUE 0.5 0.992409296 TRUE 0.971149132 0.9592420 0.84090036 0.9166582 322710 11331 2255365 2255366 1 9 Same - - 5.0328501 91.667001577 0 1.051129e+02 NA 4.366059 5.965692 1.0789580 3026 Negative regulator of sigma E activity [Signal transduction mechanisms] T MucB/RseB 3.395239 4.766750 1.0851484 3073 Negative regulator of sigma E activity [Signal transduction mechanisms] T Anti sigma-E protein RseA, N-terminal:Anti sigma-E protein RseA, C-terminal T TRUE FALSE -2 TRUE 0.9317511709 2.6276406 3.0084433 0.8039394 0.5921955 Y 2.4007771 0.9497194 14.46022727 0.74776740 0.94212297 0.75589879 0.979698606 TRUE 0.5 0.979698606 TRUE 0.933158622 0.9497194 0.82484333 0.8982420 322710 11331 2255366 2255367 1 33 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 3.395239 4.766750 1.0851484 3073 Negative regulator of sigma E activity [Signal transduction mechanisms] T Anti sigma-E protein RseA, N-terminal:Anti sigma-E protein RseA, C-terminal 6.212023 8.194203 1.1170695 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K Sigma-70 region 2:Sigma-70 region 4 - TRUE FALSE -3 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 N 0.7317929 0.6261329 19.94318182 0.58131763 0.34724251 0.59188637 0.424824869 FALSE 0.5 0.424824869 FALSE 0.315544437 0.6261329 0.24927009 0.4390440 322710 11331 2255367 2255368 1 -102 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 6.212023 8.194203 1.1170695 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K Sigma-70 region 2:Sigma-70 region 4 3.355901 4.430386 1.0118940 3677 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L conserved hypothetical protein - TRUE FALSE -4 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 N 0.7317929 0.5765429 1.35795455 0.53528962 0.19706775 0.54611306 0.220401324 FALSE 0.5 0.220401324 FALSE 0.175090333 0.5765429 0.15559636 0.3888598 322710 11331 2255368 2255369 1 37 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 3.355901 4.430386 1.0118940 3677 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L conserved hypothetical protein 6.040844 7.819166 1.0204872 - - - RNA polymerase sigma-H factor AlgT TRUE FALSE -5 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 20.47159091 0.56294397 0.14493487 0.57363634 0.179200366 FALSE 0.5 0.179200366 FALSE 0.156775480 0.5611155 0.12613896 0.3740187 322710 11331 2255371 2255372 1 -16 Same - - 0.0000000 6.731401560 0 6.731402e+00 NA 3.549150 4.921791 1.0849889 - - - conserved hypothetical protein 3.143423 4.111193 1.0083481 2938 Uncharacterized conserved protein [Function unknown] S Protein of unknown function DUF339 TRUE FALSE -6 TRUE 0.3922770566 1.3193305 1.6210210 0.8039394 0.5921955 U 0.5877867 0.7438286 2.85795455 0.70823823 0.62350530 0.71716195 0.800799094 TRUE 0.5 0.800799094 TRUE 0.678951993 0.7438286 0.46558372 0.5757276 322710 11331 2255375 2255376 1 -3 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 3.153293 4.258114 1.0476732 - - - transposase 2.807881 3.953433 1.0690989 - - - hypothetical protein FALSE FALSE -6 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 6.87500000 0.86429110 0.14493487 0.86932250 0.519116746 TRUE 0.5 0.519116746 TRUE 0.478977457 0.5611155 0.12613896 0.3740187 322710 11331 2255376 2255377 1 126 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.807881 3.953433 1.0690989 - - - hypothetical protein 2.094863 2.693231 0.8922074 - - - transposase FALSE FALSE -5 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 29.72727273 0.35295627 0.14493487 0.36297258 0.084635938 FALSE 0.5 0.084635938 FALSE 0.072992365 0.5611155 0.12613896 0.3740187 322710 11331 2255378 2255379 1 -276 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 3.094162 4.079072 1.0396144 3335 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L hypothetical protein 3.266393 4.486362 1.0894085 - - - hypothetical protein TRUE FALSE -5 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 0.67613636 0.43136177 0.14493487 0.44208289 0.113932143 FALSE 0.5 0.113932143 FALSE 0.098692765 0.5611155 0.12613896 0.3740187 322710 11331 2255379 2255380 1 20 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 3.266393 4.486362 1.0894085 - - - hypothetical protein 2.688668 3.517975 0.9625134 1024 Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] I Enoyl-CoA hydratase/isomerase TRUE FALSE -6 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 17.88636364 0.69496556 0.14493487 0.70412564 0.278592188 FALSE 0.5 0.278592188 FALSE 0.247479660 0.5611155 0.12613896 0.3740187 322710 11331 2255380 2255381 1 317 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.688668 3.517975 0.9625134 1024 Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] I Enoyl-CoA hydratase/isomerase 5.201256 7.119006 1.1135504 - - - hypothetical protein TRUE FALSE -7 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 37.13636364 0.05336087 0.14493487 0.05560582 0.009464166 FALSE 0.5 0.009464166 FALSE 0.008070974 0.5611155 0.12613896 0.3740187 322710 11331 2255381 2255382 1 71 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 5.201256 7.119006 1.1135504 - - - hypothetical protein 2.556529 3.383822 0.9568901 3547 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L Transposase IS116/IS110/IS902 TRUE FALSE -8 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 24.42045455 0.48555879 0.14493487 0.49645091 0.137920022 FALSE 0.5 0.137920022 FALSE 0.119906262 0.5611155 0.12613896 0.3740187 322710 11331 2255382 2255383 1 125 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.556529 3.383822 0.9568901 3547 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L Transposase IS116/IS110/IS902 2.353291 3.114501 0.9807068 - - - hypothetical protein TRUE FALSE -9 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 29.60795455 0.35810575 0.14493487 0.36818504 0.086393428 FALSE 0.5 0.086393428 FALSE 0.074527759 0.5611155 0.12613896 0.3740187 322710 11331 2255384 2255385 1 156 Same + + 0.0000000 0.009936207 0 9.936207e-03 NA 2.417841 3.191869 0.9370684 3335 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L similar to Transposase and inactivated derivatives 1.537563 2.061450 0.7502608 673 Predicted dehydrogenases and related proteins [General function prediction only] R Oxidoreductase, N-terminal:Oxidoreductase, C-terminal FALSE FALSE -9 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 31.90340909 0.24393670 0.30486020 0.25206445 0.123957480 FALSE 0.5 0.123957480 FALSE 0.084035543 0.6112941 0.22140087 0.4236152 322710 11331 2255385 2255386 1 12 Same + + 4.9700613 4.053376671 0 7.005231e+00 NA 1.537563 2.061450 0.7502608 673 Predicted dehydrogenases and related proteins [General function prediction only] R Oxidoreductase, N-terminal:Oxidoreductase, C-terminal 1.688895 2.234341 0.8160796 1082 Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism] G conserved hypothetical protein FALSE FALSE -8 TRUE 0.9265456646 1.3308302 1.3835576 0.8039394 0.5921955 U 0.5877867 0.7550469 15.71590909 0.73364663 0.64534161 0.74207623 0.833665076 TRUE 0.5 0.833665076 TRUE 0.722376506 0.7550469 0.48577309 0.5902521 322710 11331 2255387 2255388 1 423 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 7.281514 9.757388 1.0901544 - - - hypothetical protein 1.466136 1.913121 0.6584895 402 Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only] FR Cytosine deaminase TRUE FALSE -8 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 38.25000000 0.03445846 0.14493487 0.03593835 0.006012836 FALSE 0.5 0.006012836 FALSE 0.005125075 0.5611155 0.12613896 0.3740187 322710 11331 2255388 2255389 1 124 Same - - 0.6931472 -9.242896933 0 -1.050541e+01 318.5 1.466136 1.913121 0.6584895 402 Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only] FR Cytosine deaminase 1.447856 1.919622 0.7702703 2030 Acyl dehydratase [Lipid metabolism] I MaoC-like dehydratase - TRUE FALSE -9 TRUE -0.1306514639 0.2680555 0.2743169 0.8039394 0.9001864 N 0.7317929 0.5547797 29.52840909 0.36147053 0.12268487 0.37158970 0.073356721 FALSE 0.5 0.073356721 FALSE 0.067891938 0.5547797 0.11399741 0.3680240 322710 11331 2255391 2255392 1 570 Same - - 0.0000000 -5.015920007 0 -3.894499e-01 NA 1.619883 2.139892 0.7502383 1596 Periplasmic protein involved in polysaccharide export [Cell envelope biogenesis, outer membrane] M Polysaccharide export protein 3.089010 4.067966 0.9549088 463 Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] M Glycosyl transferase, family 2 M TRUE FALSE -10 TRUE 0.3922770566 0.1989959 0.2406736 0.8039394 0.5921955 Y 2.4007771 0.7289446 39.18181818 0.02325197 0.59349621 0.02426266 0.033588647 FALSE 0.5 0.033588647 FALSE 0.018264832 0.7289446 0.43868391 0.5568949 322710 11331 2255392 2255393 1 233 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 3.089010 4.067966 0.9549088 463 Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] M Glycosyl transferase, family 2 4.079352 5.376381 1.0549684 - - - Glycosyl transferase, family 2 TRUE FALSE -11 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 35.04545455 0.10908880 0.30486020 0.11339742 0.050963276 FALSE 0.5 0.050963276 FALSE 0.033647045 0.6112941 0.22140087 0.4236152 322710 11331 2255393 2255394 1 172 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 4.079352 5.376381 1.0549684 - - - Glycosyl transferase, family 2 3.635820 4.688096 1.0193759 - - - Glycosyl transferase, family 2 TRUE FALSE -12 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 32.55681818 0.21199036 0.30486020 0.21936251 0.105530647 FALSE 0.5 0.105530647 FALSE 0.071061889 0.6112941 0.22140087 0.4236152 322710 11331 2255394 2255395 1 -135 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 3.635820 4.688096 1.0193759 - - - Glycosyl transferase, family 2 1.779966 2.373655 0.7957197 1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] MG Polysaccharide biosynthesis protein CapD TRUE FALSE -13 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 1.17045455 0.50767592 0.30486020 0.51856406 0.311406152 FALSE 0.5 0.311406152 FALSE 0.226739308 0.6112941 0.22140087 0.4236152 322710 11331 2255395 2255396 1 325 Same - - 28.3300708 -8.432140061 0 2.889810e+01 318.5 1.779966 2.373655 0.7957197 1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] MG Polysaccharide biosynthesis protein CapD 1.527519 2.041899 0.7448008 399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane] M DegT/DnrJ/EryC1/StrS aminotransferase M TRUE FALSE -14 TRUE 3.6478694456 1.8897680 0.2694651 0.8039394 0.9001864 Y 2.4007771 0.9208379 37.29545455 0.05024255 0.90602002 0.05236355 0.337743819 FALSE 0.5 0.337743819 FALSE 0.154765176 0.9208379 0.77584916 0.8446289 322710 11331 2255396 2255397 1 992 Same - - 39.3700554 11.964780263 0 4.648922e+01 318.5 1.527519 2.041899 0.7448008 399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane] M DegT/DnrJ/EryC1/StrS aminotransferase 1.695226 2.284620 0.8482592 1043 Acyl-[acyl carrier protein] M transferase hexapeptide repeat M TRUE FALSE -15 TRUE 4.1578177356 2.1036016 1.9683646 0.8039394 0.9001864 Y 2.4007771 0.9709740 39.93181818 0.01663454 0.96732005 0.01736271 0.333647863 FALSE 0.5 0.333647863 FALSE 0.094569827 0.9709740 0.86061747 0.9398795 322710 11331 2255397 2255398 1 -3 Same - - 49.8378251 31.054150098 0 1.413649e+02 318.5 1.695226 2.284620 0.8482592 1043 Acyl-[acyl carrier protein] M transferase hexapeptide repeat 1.655678 2.230679 0.8248521 2148 Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis, outer membrane] M Undecaprenyl-phosphategalactosephosphotransferase M TRUE FALSE -16 TRUE 4.5054952332 2.8908373 2.3909027 0.8039394 0.9001864 Y 2.4007771 0.9813081 6.87500000 0.86429110 0.97917671 0.86932250 0.996671959 TRUE 0.5 0.996671959 TRUE 0.978633423 0.9813081 0.87792567 0.9608377 322710 11331 2255398 2255399 1 0 Same - - 28.6593694 6.168736426 0 9.668075e+01 318.5 1.655678 2.230679 0.8248521 2148 Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis, outer membrane] M Undecaprenyl-phosphategalactosephosphotransferase 1.542676 2.032109 0.7228775 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M Glycosyl transferase, group 1 M TRUE FALSE -17 TRUE 3.6853148552 2.5678317 1.5636473 0.8039394 0.9001864 Y 2.4007771 0.9616716 9.88068182 0.82204981 0.95642930 0.82833625 0.990234821 TRUE 0.5 0.990234821 TRUE 0.961805844 0.9616716 0.84498969 0.9214185 322710 11331 2255401 2255402 1 -3 Same - - 8.4346350 3.647522366 0 1.208216e+01 NA 1.523064 2.034961 0.7189644 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M Glycosyl transferase, group 1 1.598732 2.152687 0.7703651 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M similar to Glycosyltransferase M TRUE FALSE -18 TRUE 1.5552100967 1.5647893 1.3600596 0.8039394 0.5921955 Y 2.4007771 0.8957660 6.87500000 0.86429110 0.87279161 0.86932250 0.977626875 TRUE 0.5 0.977626875 TRUE 0.945888015 0.8957660 0.73295577 0.8006459 322710 11331 2255402 2255403 1 -3 Same - - 0.0000000 0.703083387 0 9.936207e-03 NA 1.598732 2.152687 0.7703651 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M similar to Glycosyltransferase 1.832418 2.520551 0.8487496 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M Glycosyl transferase, group 1 M TRUE FALSE -19 TRUE 0.3922770566 0.3889953 1.0338846 0.8039394 0.5921955 Y 2.4007771 0.8049542 6.87500000 0.86429110 0.73510947 0.86932250 0.946449892 TRUE 0.5 0.946449892 TRUE 0.895902361 0.8049542 0.57471255 0.6585516 322710 11331 2255403 2255404 1 781 Same - - 0.0000000 -5.335656612 0 -1.464544e+00 NA 1.832418 2.520551 0.8487496 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M Glycosyl transferase, group 1 1.814968 2.387951 0.7942731 463 Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] M Glycosyl transferase, family 2 M TRUE FALSE -20 TRUE 0.3922770566 0.2032810 0.2429852 0.8039394 0.5921955 Y 2.4007771 0.7293063 39.77272727 0.01788388 0.59423988 0.01866570 0.025975345 FALSE 0.5 0.025975345 FALSE 0.014068416 0.7293063 0.43933904 0.5573467 322710 11331 2255404 2255405 1 -3 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 1.814968 2.387951 0.7942731 463 Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] M Glycosyl transferase, family 2 1.848471 2.414673 0.8038382 463 Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] M Glycosyl transferase, family 2 M TRUE FALSE -21 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 Y 2.4007771 0.7763875 6.87500000 0.86429110 0.68513907 0.86932250 0.932697795 TRUE 0.5 0.932697795 TRUE 0.875161271 0.7763875 0.52397859 0.6186995 322710 11331 2255405 2255406 1 31 Same - - 0.0000000 -7.247547055 0 -7.387566e+00 NA 1.848471 2.414673 0.8038382 463 Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] M Glycosyl transferase, family 2 1.463190 1.907445 0.6612726 1004 Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] M UDP-glucose 6-dehydrogenase M TRUE FALSE -22 TRUE 0.3922770566 0.2493345 0.2600178 0.8039394 0.5921955 Y 2.4007771 0.7324052 19.65909091 0.59443916 0.60058231 0.60490180 0.687882749 TRUE 0.5 0.687882749 TRUE 0.540225496 0.7324052 0.44494982 0.5612299 322710 11331 2255406 2255407 1 -3 Same - - 0.0000000 -0.750844265 0 -1.180026e+00 NA 1.463190 1.907445 0.6612726 1004 Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] M UDP-glucose 6-dehydrogenase 2.473793 3.220963 0.8881107 - - - conserved hypothetical protein TRUE FALSE -23 TRUE 0.3922770566 0.2013322 0.2231961 0.8039394 0.5921955 U 0.5877867 0.5470790 6.87500000 0.86429110 0.09494781 0.86932250 0.400527484 FALSE 0.5 0.400527484 FALSE 0.412247032 0.5470790 0.09920570 0.3608147 322710 11331 2255407 2255408 1 13 Same - - 0.0000000 -0.343703834 0 -3.437038e-01 NA 2.473793 3.220963 0.8881107 - - - conserved hypothetical protein 1.722575 2.294904 0.7977226 2236 Predicted phosphoribosyltransferases [General function prediction only] R Phosphoribosyltransferase TRUE FALSE -24 TRUE 0.3922770566 0.1993653 0.2245373 0.8039394 0.5921955 U 0.5877867 0.5471698 16.19886364 0.72825379 0.09527957 0.73679283 0.220109300 FALSE 0.5 0.220109300 FALSE 0.228227507 0.5471698 0.09938042 0.3608993 322710 11331 2255408 2255409 1 -3 Same - - 0.0000000 0.009936207 0 9.936207e-03 318.5 1.722575 2.294904 0.7977226 2236 Predicted phosphoribosyltransferases [General function prediction only] R Phosphoribosyltransferase 1.592889 2.119041 0.7003727 1132 ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] V ABC transporter, transmembrane region:ABC transporter TRUE FALSE -25 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.9001864 U 0.5877867 0.6360767 6.87500000 0.86429110 0.37453725 0.86932250 0.792259116 TRUE 0.5 0.792259116 TRUE 0.699714754 0.6360767 0.26786976 0.4495896 322710 11331 2255409 2255410 1 936 Same - - 0.0000000 -4.616533945 0 9.936207e-03 318.5 1.592889 2.119041 0.7003727 1132 ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] V ABC transporter, transmembrane region:ABC transporter 1.506516 1.963187 0.7051918 2199 FOG: GGDEF domain [Signal transduction mechanisms] T GGDEF - TRUE FALSE -26 TRUE 0.3922770566 0.5517639 0.2314983 0.8039394 0.9001864 N 0.7317929 0.6026042 39.89772727 0.01689575 0.27907127 0.01763515 0.006608777 FALSE 0.5 0.006608777 FALSE 0.004412538 0.6026042 0.20501666 0.4147465 322710 11331 2255410 2255411 1 129 Same - - 0.0000000 -2.456444602 0 -2.456445e+00 318.5 1.506516 1.963187 0.7051918 2199 FOG: GGDEF domain [Signal transduction mechanisms] T GGDEF 1.568467 2.052364 0.6996297 161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism] H Aminotransferase class-III - TRUE FALSE -27 TRUE 0.3922770566 0.2100232 0.2234122 0.8039394 0.9001864 N 0.7317929 0.5887669 29.97159091 0.34201345 0.23643547 0.35188810 0.138637030 FALSE 0.5 0.138637030 FALSE 0.101686164 0.5887669 0.17883010 0.4008716 322710 11331 2255412 2255413 1 147 Same + + 0.0000000 0.000000000 0 0.000000e+00 318.5 2.823125 3.706538 0.9607274 - - - hypothetical protein 1.481306 1.937715 0.6596876 1629 Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism] P TonB-dependent receptor FALSE FALSE -27 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.9001864 U 0.5877867 0.5869356 31.36363636 0.27183312 0.23064198 0.28054545 0.100649224 FALSE 0.5 0.100649224 FALSE 0.073544165 0.5869356 0.17535531 0.3990575 322710 11331 2255414 2255415 1 29 Same - - 0.0000000 -11.271296198 0 -1.127130e+01 NA 1.704277 2.296134 0.8134825 3204 Uncharacterized protein conserved in bacteria [Function unknown] S SdiA-regulated 1.569759 2.049997 0.7939338 3111 Uncharacterized conserved protein [Function unknown] S Conserved hypothetical protein 156 TRUE FALSE -27 TRUE 0.3922770566 0.2723399 0.2877636 0.8039394 0.5921955 U 0.5877867 0.5578436 19.31818182 0.61352745 0.13350797 0.62380929 0.196529554 FALSE 0.5 0.196529554 FALSE 0.177777723 0.5578436 0.11987220 0.3709158 322710 11331 2255415 2255416 1 165 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 1.569759 2.049997 0.7939338 3111 Uncharacterized conserved protein [Function unknown] S Conserved hypothetical protein 156 2.048678 2.687723 0.8743469 4461 Uncharacterized protein conserved in bacteria, putative lipoprotein [Function unknown] S lipoprotein, putative TRUE FALSE -28 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 32.31818182 0.22334190 0.30486020 0.23099309 0.111991720 FALSE 0.5 0.111991720 FALSE 0.075590969 0.6112941 0.22140087 0.4236152 322710 11331 2255416 2255417 1 169 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 2.048678 2.687723 0.8743469 4461 Uncharacterized protein conserved in bacteria, putative lipoprotein [Function unknown] S lipoprotein, putative 1.980452 2.764415 0.9418693 - - - hypothetical protein TRUE FALSE -29 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 32.46022727 0.21653712 0.30486020 0.22402243 0.108107316 FALSE 0.5 0.108107316 FALSE 0.072865517 0.6112941 0.22140087 0.4236152 322710 11331 2255417 2255418 1 2 Same - - 6.4781169 3.571116960 0 2.128761e+01 NA 1.980452 2.764415 0.9418693 - - - hypothetical protein 1.904725 2.548716 0.8368833 3267 Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] U Putative peptidoglycan binding domain 1 TRUE FALSE -30 TRUE 1.2389865297 1.7658022 1.3490821 0.8039394 0.5921955 U 0.5877867 0.7824535 12.05681818 0.76018019 0.69605525 0.76803556 0.878920888 TRUE 0.5 0.878920888 TRUE 0.784663945 0.7824535 0.53479070 0.6269880 322710 11331 2255418 2255419 1 138 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.904725 2.548716 0.8368833 3267 Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] U Putative peptidoglycan binding domain 1 3.251475 4.141178 0.9618327 - - - helicase domain protein TRUE FALSE -31 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 30.79545455 0.30146648 0.14493487 0.31072329 0.068165446 FALSE 0.5 0.068165446 FALSE 0.058642596 0.5611155 0.12613896 0.3740187 322710 11331 2255419 2255420 1 83 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 3.251475 4.141178 0.9618327 - - - helicase domain protein 2.823001 3.702806 0.9642151 4889 Predicted helicase [General function prediction only] R DEAD/DEAH box helicase:Helicase, C-terminal:Type III restriction enzyme, res subunit TRUE FALSE -32 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 25.80113636 0.46493883 0.14493487 0.47579620 0.128378941 FALSE 0.5 0.128378941 FALSE 0.111450238 0.5611155 0.12613896 0.3740187 322710 11331 2255420 2255421 1 373 Same - - 0.0000000 -4.616533945 0 9.936207e-03 318.5 2.823001 3.702806 0.9642151 4889 Predicted helicase [General function prediction only] R DEAD/DEAH box helicase:Helicase, C-terminal:Type III restriction enzyme, res subunit 1.441133 1.914295 0.6335332 474 Cation transport ATPase [Inorganic ion transport and metabolism] P Cation transporting ATPase, N-terminal:Haloacid dehalogenase-like hydrolase:Cation transporting ATPase, C-terminal:E1-E2 ATPase-associated region TRUE FALSE -33 TRUE 0.3922770566 0.5517639 0.2314983 0.8039394 0.9001864 U 0.5877867 0.5874468 37.86363636 0.04026771 0.23226273 0.04198624 0.012534177 FALSE 0.5 0.012534177 FALSE 0.008901902 0.5874468 0.17632543 0.3995634 322710 11331 2255424 2255425 1 11 Same + + 2.4411573 -1.503677116 0 -1.407168e+00 NA 1.738677 2.282527 0.8772303 1734 DnaK suppressor protein [Signal transduction mechanisms] T Zn-finger, prokaryotic DksA/TraR C4 type 1.789948 2.397690 0.8202123 523 Putative GTPases (G3E family) [General function prediction only] R Cobalamin synthesis protein/P47K FALSE FALSE -33 TRUE 0.2825994072 0.2030229 0.2229185 0.8039394 0.5921955 U 0.5877867 0.5380780 15.23863636 0.73912630 0.06152087 0.74744218 0.156638944 FALSE 0.5 0.156638944 FALSE 0.201684431 0.5380780 0.08186806 0.3524932 322710 11331 2255425 2255426 1 2 Same + + 13.9403344 30.113996484 0 4.394513e+01 NA 1.789948 2.397690 0.8202123 523 Putative GTPases (G3E family) [General function prediction only] R Cobalamin synthesis protein/P47K 1.949044 2.646961 0.9109066 - - - conserved hypothetical protein FALSE FALSE -32 TRUE 2.3956927492 2.0791582 2.3830916 0.8039394 0.5921955 U 0.5877867 0.9031203 12.05681818 0.76018019 0.88272967 0.76803556 0.959774795 TRUE 0.5 0.959774795 TRUE 0.902806589 0.9031203 0.74557275 0.8133128 322710 11331 2255429 2255430 1 24 Same - - 0.0000000 -20.932560460 0 -1.906079e+01 318.5 2.051876 2.671942 0.9015892 1514 2'-5' RNA ligase [Translation, ribosomal structure and biogenesis] J 2'-5' RNA ligase 1.868253 2.492602 0.8814753 782 Transcription elongation factor [Transcription] K Prokaryotic transcription elongation factor GreB - TRUE FALSE -32 TRUE 0.3922770566 0.3097705 0.3374358 0.8039394 0.9001864 N 0.7317929 0.6062920 18.52272727 0.66245694 0.29010592 0.67213269 0.445070791 FALSE 0.5 0.445070791 FALSE 0.345518848 0.6062920 0.21197557 0.4184954 322710 11331 2255430 2255431 1 52 Same - - 0.0000000 -8.530146696 0 -2.071248e+01 318.5 1.868253 2.492602 0.8814753 782 Transcription elongation factor [Transcription] K Prokaryotic transcription elongation factor GreB 1.915040 2.582922 0.8611655 3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism] Q Protein of unknown function DUF214 - TRUE FALSE -33 TRUE 0.3922770566 0.3170348 0.2701766 0.8039394 0.9001864 N 0.7317929 0.5984688 22.31818182 0.50358006 0.26653585 0.51447216 0.269344772 FALSE 0.5 0.269344772 FALSE 0.199480173 0.5984688 0.19720320 0.4105685 322710 11331 2255431 2255432 1 1 Same - - 6.1882690 41.604974004 0 4.475206e+01 318.5 1.915040 2.582922 0.8611655 3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism] Q Protein of unknown function DUF214 2.027471 2.823750 0.9103754 4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] Q ABC transporter Q TRUE FALSE -34 TRUE 1.2004996494 2.0896128 2.5364386 0.8039394 0.9001864 Y 2.4007771 0.9433260 11.12500000 0.79070349 0.93432156 0.79782496 0.981732962 TRUE 0.5 0.981732962 TRUE 0.942978872 0.9433260 0.81403591 0.8860882 322710 11331 2255433 2255434 1 90 Same + + 0.0000000 6.130574398 0 6.130574e+00 NA 2.776530 3.740910 1.0586634 2755 Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] E Arylesterase 2.628440 3.432927 0.9791264 - - - conserved hypothetical protein FALSE FALSE -34 TRUE 0.3922770566 1.2829333 1.5621544 0.8039394 0.5921955 U 0.5877867 0.7370509 26.44886364 0.45673952 0.60999039 0.46757274 0.568024617 TRUE 0.5 0.568024617 TRUE 0.410809934 0.7370509 0.45335044 0.5670908 322710 11331 2255434 2255435 1 67 Same + + 0.0000000 6.598005384 0 6.598005e+00 NA 2.628440 3.432927 0.9791264 - - - conserved hypothetical protein 2.705337 3.618251 0.9527973 1376 Uncharacterized protein conserved in bacteria [Function unknown] S ErfK/YbiS/YcfS/YnhG FALSE FALSE -33 TRUE 0.3922770566 1.3104536 1.6027675 0.8039394 0.5921955 U 0.5877867 0.7418114 24.04545455 0.48648072 0.61950869 0.49737353 0.606678840 TRUE 0.5 0.606678840 TRUE 0.448532183 0.7418114 0.46194555 0.5731463 322710 11331 2255440 2255441 1 120 Same - - 2.2088646 -30.539615561 0 -8.590338e+00 318.5 1.621451 2.121402 0.7287855 175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [Amino acid transport and metabolism / Coenzyme metabolism] EH Phosphoadenosine phosphosulfate reductase CysH-type 2.489873 3.307297 0.9452773 147 Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism] EH Para-aminobenzoate synthase, component I EH TRUE FALSE -33 TRUE 0.2324036391 0.2564194 0.3548540 0.8039394 0.9001864 Y 2.4007771 0.7517925 29.20454545 0.37463848 0.63907418 0.38490407 0.514740645 TRUE 0.5 0.514740645 TRUE 0.356011875 0.7517925 0.47992385 0.5860089 322710 11331 2255441 2255442 1 86 Same - - 0.0000000 -8.215533959 0 -1.010939e+01 318.5 2.489873 3.307297 0.9452773 147 Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism] EH Para-aminobenzoate synthase, component I 1.576550 2.005306 0.7008957 - - - conserved hypothetical protein TRUE FALSE -34 TRUE 0.3922770566 0.2653819 0.2684697 0.8039394 0.9001864 U 0.5877867 0.5810911 26.05681818 0.46172725 0.21190862 0.47257586 0.187421874 FALSE 0.5 0.187421874 FALSE 0.144263942 0.5810911 0.16425185 0.3933025 322710 11331 2255442 2255443 1 4 Same - - 18.0083580 50.827868945 0 7.970034e+01 NA 1.576550 2.005306 0.7008957 - - - conserved hypothetical protein 1.534441 2.005124 0.6693085 - - - conserved hypothetical protein TRUE FALSE -35 TRUE 2.8788377829 2.4239459 2.6310310 0.8039394 0.5921955 U 0.5877867 0.9289823 13.04545455 0.74278081 0.91642816 0.75101944 0.969387305 TRUE 0.5 0.969387305 TRUE 0.915572176 0.9289823 0.78971025 0.8594170 322710 11331 2255443 2255444 1 6 Same - - 1.2809338 7.813539011 0 1.102268e+01 NA 1.534441 2.005124 0.6693085 - - - conserved hypothetical protein 2.418539 3.242115 0.9547938 4067 Uncharacterized protein conserved in archaea [Posttranslational modification, protein turnover, chaperones] O Protein of unknown function DUF785 TRUE FALSE -36 TRUE -0.0480750173 1.5239782 1.7411763 0.8039394 0.5921955 U 0.5877867 0.7334508 13.67613636 0.74490729 0.60270999 0.75310045 0.815838355 TRUE 0.5 0.815838355 TRUE 0.702282781 0.7334508 0.44684149 0.5625448 322710 11331 2255445 2255446 1 -3 Same + + 4.7756732 67.357159540 0 6.575213e+01 318.5 2.329324 3.098889 0.9332855 1802 Transcriptional regulators [Transcription] K regulatory protein, GntR 1.581511 2.052474 0.7220562 2513 PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism] G carboxyvinyl-carboxyphosphonate phosphorylmutase, putative - TRUE TRUE -36 TRUE 0.8726906314 2.3091380 2.8224248 0.8039394 0.9001864 N 0.7317929 0.8958796 6.87500000 0.86429110 0.87294636 0.86932250 0.977657358 TRUE 0.5 0.977657358 TRUE 0.945939028 0.8958796 0.73315089 0.8008401 322710 11331 2255446 2255447 1 77 Same + + 36.6999255 108.932275405 0 2.354037e+02 318.5 1.581511 2.052474 0.7220562 2513 PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism] G carboxyvinyl-carboxyphosphonate phosphorylmutase, putative 1.422996 1.882157 0.6343432 372 Citrate synthase [Energy production and conversion] C Citrate synthase - TRUE TRUE -35 TRUE 4.0323395258 3.2697891 3.1525239 0.8039394 0.9001864 N 0.7317929 0.9711577 25.07386364 0.47724110 0.96753308 0.48812367 0.964546268 TRUE 0.5 0.964546268 TRUE 0.849655487 0.9711577 0.86092572 0.9402480 322710 11331 2255447 2255448 1 2 Same + + 16.7671676 57.232073855 0 1.335736e+02 318.5 1.422996 1.882157 0.6343432 372 Citrate synthase [Energy production and conversion] C Citrate synthase 1.267570 1.662733 0.5006053 1048 Aconitase A [Energy production and conversion] C Aconitate hydratase, C-terminal:Aconitate hydratase, N-terminal C TRUE TRUE -34 TRUE 2.7590954826 2.8525648 2.7235653 0.8039394 0.9001864 Y 2.4007771 0.9718731 12.05681818 0.76018019 0.96836168 0.76803556 0.989797870 TRUE 0.5 0.989797870 TRUE 0.951970824 0.9718731 0.86212563 0.9416840 322710 11331 2255448 2255449 1 111 Same + + 18.6803390 59.064664497 0 1.515415e+02 NA 1.267570 1.662733 0.5006053 1048 Aconitase A [Energy production and conversion] C Aconitate hydratase, C-terminal:Aconitate hydratase, N-terminal 1.623408 2.144402 0.7361051 2828 Uncharacterized protein conserved in bacteria [Function unknown] S Protein of unknown function DUF453 TRUE TRUE -33 TRUE 2.9445004547 2.9466740 2.7491471 0.8039394 0.5921955 U 0.5877867 0.9390019 28.47727273 0.40158100 0.92898484 0.41209836 0.897735886 TRUE 0.5 0.897735886 TRUE 0.736899703 0.9390019 0.80671402 0.8779618 322710 11331 2255453 2255454 1 198 Same + + 0.0000000 -18.300101102 0 -1.830010e+01 NA 2.444365 3.167613 0.9214522 684 Demethylmenaquinone methyltransferase [Coenzyme metabolism] H Protein of unknown function 1935 3.559064 4.883718 1.0935569 - - - conserved hypothetical protein TRUE TRUE -32 TRUE 0.3922770566 0.3061419 0.3255760 0.8039394 0.5921955 U 0.5877867 0.5638242 33.84090909 0.15454962 0.15429483 0.16033065 0.032274850 FALSE 0.5 0.032274850 FALSE 0.026891791 0.5638242 0.13132203 0.3765992 322710 11331 2255454 2255455 1 -70 Same + + 0.0000000 7.120391830 0 7.120392e+00 NA 3.559064 4.883718 1.0935569 - - - conserved hypothetical protein 3.285956 4.504298 1.0965795 - - - Conserved TM helix TRUE TRUE -31 TRUE 0.3922770566 1.3534717 1.6672075 0.8039394 0.5921955 U 0.5877867 0.7492295 1.68750000 0.58112105 0.63409972 0.59169127 0.706246323 TRUE 0.5 0.706246323 TRUE 0.556889518 0.7492295 0.47531275 0.5826842 322710 11331 2255455 2255456 1 51 Same + + 0.0000000 9.579096108 0 9.538069e+00 NA 3.285956 4.504298 1.0965795 - - - Conserved TM helix 4.621515 6.046558 1.0897647 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K Sigma-70 region 2:Sigma-70 region 4 TRUE TRUE -30 TRUE 0.3922770566 1.4738491 1.8633755 0.8039394 0.5921955 U 0.5877867 0.7706332 22.17613636 0.50761678 0.67462514 0.51850498 0.681277460 TRUE 0.5 0.681277460 TRUE 0.521310590 0.7706332 0.51370271 0.6109209 322710 11331 2255456 2255457 1 111 Same + + 0.0000000 5.695570598 0 4.963854e+00 318.5 4.621515 6.046558 1.0897647 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K Sigma-70 region 2:Sigma-70 region 4 2.180824 2.872860 0.8671003 2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane] M Thrombospondin type 3 repeat:OmpA/MotB domain - TRUE TRUE -29 TRUE 0.3922770566 1.1898430 1.5236376 0.8039394 0.9001864 N 0.7317929 0.7622991 28.47727273 0.40158100 0.65911601 0.41209836 0.564753163 TRUE 0.5 0.564753163 TRUE 0.400414611 0.7622991 0.49878601 0.5997973 322710 11331 2255458 2255459 1 99 Same - - 7.1082820 4.355513654 0 1.560757e+01 318.5 1.840522 2.451896 0.8149841 7 Uroporphyrinogen-III methylase [Coenzyme metabolism] H Uroporphyrin-III C-methyltransferase, C-terminal 1.737481 2.293833 0.7789389 243 Anaerobic dehydrogenases, typically selenocysteine-containing [Energy production and conversion] C Nitrate reductase - FALSE TRUE -29 TRUE 1.3705494217 1.6483176 1.4044852 0.8039394 0.9001864 N 0.7317929 0.8178263 27.40340909 0.43734837 0.75648498 0.44810103 0.707148170 TRUE 0.5 0.707148170 TRUE 0.535640255 0.8178263 0.59742175 0.6772110 322710 11331 2255459 2255460 1 77 Same - - 26.0428286 57.819076810 0 9.852808e+01 293.0 1.737481 2.293833 0.7789389 243 Anaerobic dehydrogenases, typically selenocysteine-containing [Energy production and conversion] C Nitrate reductase 1.654905 2.137276 0.8649957 2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only] PR Rieske [2Fe-2S] domain - FALSE TRUE -30 TRUE 3.5841899479 2.5757549 2.7363378 0.8039394 1.1942264 N 0.7317929 0.9589563 25.07386364 0.47724110 0.95321049 0.48812367 0.948975549 TRUE 0.5 0.948975549 TRUE 0.827819763 0.9589563 0.84041943 0.9161003 322710 11331 2255460 2255461 1 110 Same - - 31.2272524 139.659877714 0 2.108993e+02 2.0 1.654905 2.137276 0.8649957 2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only] PR Rieske [2Fe-2S] domain 1.422433 1.852211 0.6120518 1251 NAD(P)H-nitrite reductase [Energy production and conversion] C FAD-dependent pyridine nucleotide-disulphide oxidoreductase:Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S domain:BFD-like [2Fe-2S]-binding domain - FALSE TRUE -31 TRUE 3.7880683218 3.1809625 3.5206855 0.8039394 3.6475777 N 0.7317929 0.9895319 28.39772727 0.40435312 0.98843514 0.41489274 0.983056672 TRUE 0.5 0.983056672 TRUE 0.848186359 0.9895319 0.89165958 0.9778646 322710 11331 2255461 2255462 1 264 Same - - 13.5716344 -5.821110659 0 -3.631522e+00 318.5 1.422433 1.852211 0.6120518 1251 NAD(P)H-nitrite reductase [Energy production and conversion] C FAD-dependent pyridine nucleotide-disulphide oxidoreductase:Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S domain:BFD-like [2Fe-2S]-binding domain 1.840763 2.454012 0.8173087 631 Serine/threonine protein phosphatase [Signal transduction mechanisms] T Protein kinase - FALSE TRUE -32 TRUE 2.3206065262 0.2193160 0.2483274 0.8039394 0.9001864 N 0.7317929 0.7335464 35.96590909 0.08106510 0.60290424 0.08437170 0.118117199 FALSE 0.5 0.118117199 FALSE 0.066564292 0.7335464 0.44701442 0.5626651 322710 11331 2255462 2255463 1 87 Same - - 7.0262226 6.398690834 0 2.317469e+01 318.5 1.840763 2.454012 0.8173087 631 Serine/threonine protein phosphatase [Signal transduction mechanisms] T Protein kinase 1.613300 2.120850 0.7300805 2223 Nitrate/nitrite transporter [Inorganic ion transport and metabolism] P Nitrate transporter - FALSE TRUE -33 TRUE 1.3549125757 1.8039033 1.5861453 0.8039394 0.9001864 N 0.7317929 0.8337020 26.14204545 0.46067970 0.78193928 0.47152526 0.753876834 TRUE 0.5 0.753876834 TRUE 0.587710030 0.8337020 0.62530177 0.7008585 322710 11331 2255464 2255465 1 -55 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 7.709150 10.198030 1.1484907 - - - hypothetical protein 1.995392 2.593785 0.8433119 2194 Predicted membrane-associated, metal-dependent hydrolase [General function prediction only] R similar to membrane-associated metal-dependent hydrolase TRUE TRUE -33 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 1.77840909 0.59306358 0.14493487 0.60353803 0.198094190 FALSE 0.5 0.198094190 FALSE 0.173805612 0.5611155 0.12613896 0.3740187 322710 11331 2255465 2255466 1 124 Same + + 0.0000000 0.009936207 0 9.936207e-03 318.5 1.995392 2.593785 0.8433119 2194 Predicted membrane-associated, metal-dependent hydrolase [General function prediction only] R similar to membrane-associated metal-dependent hydrolase 2.098222 2.887777 0.9227643 1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] G Carbohydrate kinase, PfkB TRUE TRUE -32 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.9001864 U 0.5877867 0.6360767 29.52840909 0.36147053 0.37453725 0.37158970 0.253167839 FALSE 0.5 0.253167839 FALSE 0.171583665 0.6360767 0.26786976 0.4495896 322710 11331 2255467 2255468 1 84 Same - - 0.0000000 -10.012017575 0 -1.005854e+01 318.5 2.030500 2.721031 0.8696262 - - - Protein kinase:Leucine-rich repeat 1.879356 2.490823 0.8229224 436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] E Aminotransferase, class I and II FALSE TRUE -32 TRUE 0.3922770566 0.2650514 0.2797976 0.8039394 0.9001864 U 0.5877867 0.5824635 25.90909091 0.46355760 0.21634146 0.47441131 0.192609289 FALSE 0.5 0.192609289 FALSE 0.147534990 0.5824635 0.16686116 0.3946493 322710 11331 2255468 2255469 1 250 Same - - 0.0000000 -12.860008209 0 -1.423809e+01 318.5 1.879356 2.490823 0.8229224 436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] E Aminotransferase, class I and II 1.479392 1.987759 0.7211700 3707 Response regulator with putative antiterminator output domain [Signal transduction mechanisms] T Response regulator receiver:ANTAR - FALSE TRUE -33 TRUE 0.3922770566 0.2879579 0.2961924 0.8039394 0.9001864 N 0.7317929 0.6005169 35.65909091 0.08978511 0.27276567 0.09341124 0.035677785 FALSE 0.5 0.035677785 FALSE 0.024224792 0.6005169 0.20107419 0.4126343 322710 11331 2255469 2255470 1 -18 Same - - 23.2348455 19.691412605 0 1.098684e+02 NA 1.479392 1.987759 0.7211700 3707 Response regulator with putative antiterminator output domain [Signal transduction mechanisms] T Response regulator receiver:ANTAR 1.887341 2.525670 0.8506707 715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] P putative nitrate transport system substrate-binding protein - FALSE TRUE -34 TRUE 3.3867800257 2.6741119 2.2043269 0.8039394 0.5921955 N 0.7317929 0.9325966 2.73295455 0.69734162 0.92098874 0.70646048 0.964102436 TRUE 0.5 0.964102436 TRUE 0.899820047 0.9325966 0.79585005 0.8660612 322710 11331 2255470 2255471 1 176 Same - - 0.0000000 -12.361884802 0 -1.667865e+01 NA 1.887341 2.525670 0.8506707 715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] P putative nitrate transport system substrate-binding protein 1.387702 1.820971 0.5362202 1049 Aconitase B [Energy production and conversion] C Aconitate hydratase 2 - FALSE TRUE -35 TRUE 0.3922770566 0.2996372 0.2935463 0.8039394 0.5921955 N 0.7317929 0.5750519 32.78977273 0.20112750 0.19215128 0.20822171 0.056500084 FALSE 0.5 0.056500084 FALSE 0.043421434 0.5750519 0.15275592 0.3874101 322710 11331 2255472 2255473 1 77 Same + + 0.0000000 -10.755108399 0 -1.075511e+01 NA 1.973046 2.562846 0.8430964 3313 Predicted Fe-S protein [General function prediction only] R Protein of unknown function DUF1289 2.083332 2.757585 0.8982397 4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis] FJ tRNA--hydroxylase TRUE TRUE -35 TRUE 0.3922770566 0.2697534 0.2840442 0.8039394 0.5921955 U 0.5877867 0.5572829 25.07386364 0.47724110 0.13153607 0.48812367 0.121474185 FALSE 0.5 0.121474185 FALSE 0.109587072 0.5572829 0.11879747 0.3703855 322710 11331 2255474 2255475 1 6 Same - - 14.3121773 110.538866220 0 2.149801e+02 318.5 2.053675 2.688146 0.8645543 2908 Uncharacterized protein conserved in bacteria [Function unknown] S UDP-2,3-diacylglucosamine hydrolase 1.530089 1.937750 0.7277168 652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] O Peptidylprolyl isomerase FALSE TRUE -35 TRUE 2.4678153965 3.1990700 3.1804043 0.8039394 0.9001864 U 0.5877867 0.9496726 13.67613636 0.74490729 0.94206622 0.75310045 0.979374939 TRUE 0.5 0.979374939 TRUE 0.932175535 0.9496726 0.82476426 0.8981524 322710 11331 2255476 2255477 1 1 Same + + 11.6132793 -9.294032978 0 -1.830097e+01 318.5 1.729922 2.253373 0.7406480 8 Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] J Glutaminyl-tRNA synthetase 1.976067 2.605050 0.8401867 215 Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J Cysteinyl-tRNA synthetase, class Ia J TRUE TRUE -35 TRUE 2.0953125936 0.3064686 0.2746035 0.8039394 0.9001864 Y 2.4007771 0.8447272 11.12500000 0.79070349 0.79905364 0.79782496 0.937588473 TRUE 0.5 0.937588473 TRUE 0.872636466 0.8447272 0.64458086 0.7177088 322710 11331 2255478 2255479 1 250 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.614754 3.457664 0.9286621 190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] H Methenyltetrahydrofolate cyclohydrolase 4.805564 6.334197 1.0692271 - - - hypothetical protein FALSE TRUE -35 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 35.65909091 0.08978511 0.14493487 0.09341124 0.016444957 FALSE 0.5 0.016444957 FALSE 0.014038707 0.5611155 0.12613896 0.3740187 322710 11331 2255480 2255481 1 35 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE -35 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 20.22727273 0.57126154 0.14493487 0.58190156 0.184238171 FALSE 0.5 0.184238171 FALSE 0.161306755 0.5611155 0.12613896 0.3740187 322710 11331 2255481 2255482 1 63 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE -34 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 23.52840909 0.48668763 0.14493487 0.49758058 0.138458182 FALSE 0.5 0.138458182 FALSE 0.120383948 0.5611155 0.12613896 0.3740187 322710 11331 2255482 2255483 1 131 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 2.678868 3.606159 0.9141506 544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones] O Trigger factor TRUE TRUE -33 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 30.19886364 0.33133496 0.14493487 0.34106111 0.077483046 FALSE 0.5 0.077483046 FALSE 0.066751755 0.5611155 0.12613896 0.3740187 322710 11331 2255483 2255484 1 90 Same + + 218.5523373 119.816482143 0 8.338438e+02 318.5 2.678868 3.606159 0.9141506 544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones] O Trigger factor 3.632939 4.696344 1.0140544 740 Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] OU Peptidase S14, ClpP O TRUE TRUE -32 TRUE 6.1083263001 3.9188041 3.2956800 0.8039394 0.9001864 Y 2.4007771 0.9939876 26.44886364 0.45673952 0.99338748 0.46757274 0.992144700 TRUE 0.5 0.992144700 TRUE 0.882221327 0.9939876 0.89908613 0.9872224 322710 11331 2255484 2255485 1 103 Same + + 228.7403558 236.815250443 0 9.364324e+02 318.5 3.632939 4.696344 1.0140544 740 Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] OU Peptidase S14, ClpP 3.429073 4.484086 1.0040071 1219 ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] O ClpX, ATPase regulatory subunit O TRUE TRUE -31 TRUE 6.1372907011 3.9720170 3.8252768 0.8039394 0.9001864 Y 2.4007771 0.9954676 27.72159091 0.42706708 0.99502256 0.43776363 0.993333835 TRUE 0.5 0.993333835 TRUE 0.872221504 0.9954676 0.90155053 0.9903514 322710 11331 2255485 2255486 1 130 Same + + 123.1885914 160.982985766 0 4.510364e+02 60.0 3.429073 4.484086 1.0040071 1219 ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] O ClpX, ATPase regulatory subunit 3.605604 4.757431 1.0364526 466 ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] O Peptidase S16, ATP-dependent protease La O TRUE TRUE -30 TRUE 5.5257699319 3.7095387 3.6199171 0.8039394 2.2898465 Y 2.4007771 0.9960157 30.07386364 0.33726806 0.99562692 0.34707797 0.991443014 TRUE 0.5 0.991443014 TRUE 0.824827545 0.9960157 0.90246300 0.9915130 322710 11331 2255486 2255487 1 136 Same + + 27.7574784 126.659770234 0 1.924209e+02 318.5 3.605604 4.757431 1.0364526 466 ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] O Peptidase S16, ATP-dependent protease La 3.888837 5.117100 1.0376338 776 Bacterial nucleoid DNA-binding protein [DNA replication, recombination, and repair] L Histone-like bacterial DNA-binding protein - TRUE TRUE -29 TRUE 3.6212577447 3.1113543 3.3890552 0.8039394 0.9001864 N 0.7317929 0.9699490 30.68181818 0.30730588 0.96613028 0.31666071 0.926765402 TRUE 0.5 0.926765402 TRUE 0.729762922 0.9699490 0.85889774 0.9378268 322710 11331 2255487 2255488 1 224 Same + + 13.6324202 87.855792786 0 1.515970e+02 318.5 3.888837 5.117100 1.0376338 776 Bacterial nucleoid DNA-binding protein [DNA replication, recombination, and repair] L Histone-like bacterial DNA-binding protein 4.703566 6.174614 1.0800028 760 Parvulin-like peptidyl-prolyl isomerase [Posttranslational modification, protein turnover, chaperones] O PpiC-type peptidyl-prolyl cis-trans isomerase - TRUE TRUE -28 TRUE 2.3413323994 2.9488346 2.9859306 0.8039394 0.9001864 N 0.7317929 0.9438364 34.83522727 0.11628831 0.93494826 0.12084271 0.654131511 TRUE 0.5 0.654131511 TRUE 0.366817905 0.9438364 0.81489950 0.8870524 322710 11331 2255489 2255490 1 246 Same - - 3.2186232 -17.083558143 0 2.281737e+01 318.5 4.846885 6.315427 1.0708886 3243 Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] I Poly(R)-hydroxyalkanoic acid synthase, class I 3.654608 4.825407 1.0580222 183 Acetyl-CoA acetyltransferase [Lipid metabolism] I Thiolase I FALSE TRUE -28 TRUE 0.5407506862 1.7959256 0.3209685 0.8039394 0.9001864 Y 2.4007771 0.8075264 35.56250000 0.09265896 0.73943527 0.09638887 0.224687216 FALSE 0.5 0.224687216 FALSE 0.123265335 0.8075264 0.57925785 0.6622443 322710 11331 2255490 2255491 1 63 Same - - 7.5028253 72.003885884 0 1.070546e+02 318.5 3.654608 4.825407 1.0580222 183 Acetyl-CoA acetyltransferase [Lipid metabolism] I Thiolase 2.564612 3.304742 0.9304187 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] QR Glucose/ribitol dehydrogenase - FALSE TRUE -29 TRUE 1.4339972389 2.6437437 2.8529380 0.8039394 0.9001864 N 0.7317929 0.9172928 23.52840909 0.48668763 0.90143194 0.49758058 0.896597249 TRUE 0.5 0.896597249 TRUE 0.760231117 0.9172928 0.76980476 0.8382705 322710 11331 2255492 2255493 1 359 Same + + 0.0000000 -4.616533945 0 -9.753350e-01 NA 4.901655 6.490477 1.0821847 2207 AraC-type DNA-binding domain-containing proteins [Transcription] K Helix-turn-helix, AraC type 2.991519 3.999040 0.9913869 - - - Phasin TRUE TRUE -29 TRUE 0.3922770566 0.1994324 0.2314983 0.8039394 0.5921955 U 0.5877867 0.5480390 37.76136364 0.04193316 0.09844815 0.04371953 0.004756724 FALSE 0.5 0.004756724 FALSE 0.004895979 0.5480390 0.10105177 0.3617089 322710 11331 2255494 2255495 1 162 Same - - 0.0000000 -2.373985306 0 -5.412597e+00 NA 3.305137 4.276253 0.9653147 5394 Uncharacterized protein conserved in bacteria [Function unknown] S Polyhydroxyalkanoate synthesis repressor PhaR 3.073839 4.148075 1.0178465 302 GTP cyclohydrolase I [Coenzyme metabolism] H GTP cyclohydrolase I FALSE TRUE -29 TRUE 0.3922770566 0.2348653 0.2233323 0.8039394 0.5921955 U 0.5877867 0.5483938 32.14204545 0.23196677 0.09973881 0.23982220 0.032377793 FALSE 0.5 0.032377793 FALSE 0.033074970 0.5483938 0.10173394 0.3620397 322710 11331 2255495 2255496 1 -43 Same - - 0.0000000 -15.743538206 0 -2.126982e+01 NA 3.073839 4.148075 1.0178465 302 GTP cyclohydrolase I [Coenzyme metabolism] H GTP cyclohydrolase I 2.419733 3.158581 0.8985224 2840 Uncharacterized protein conserved in bacteria [Function unknown] S Smr protein/MutS2 C-terminal FALSE TRUE -30 TRUE 0.3922770566 0.3198382 0.3135795 0.8039394 0.5921955 U 0.5877867 0.5628677 1.98863636 0.61939861 0.15100003 0.62961855 0.224473812 FALSE 0.5 0.224473812 FALSE 0.194903414 0.5628677 0.12949237 0.3756868 322710 11331 2255496 2255497 1 53 Same - - 0.0000000 6.219726416 0 6.219726e+00 NA 2.419733 3.158581 0.8985224 2840 Uncharacterized protein conserved in bacteria [Function unknown] S Smr protein/MutS2 C-terminal 4.161837 5.635838 1.1566573 - - - conserved hypothetical protein FALSE TRUE -31 TRUE 0.3922770566 1.2866525 1.5681314 0.8039394 0.5921955 U 0.5877867 0.7377450 22.42613636 0.50060545 0.61138590 0.51149950 0.611961154 TRUE 0.5 0.611961154 TRUE 0.455205049 0.7377450 0.45460452 0.5679706 322710 11331 2255497 2255498 1 108 Same - - 0.0000000 6.742112863 0 6.742113e+00 NA 4.161837 5.635838 1.1566573 - - - conserved hypothetical protein 2.400268 3.182789 0.9448025 1335 Amidases related to nicotinamidase [Secondary metabolites biosynthesis, transport, and catabolism] Q Isochorismatase hydrolase FALSE TRUE -32 TRUE 0.3922770566 1.3206035 1.6225478 0.8039394 0.5921955 U 0.5877867 0.7440127 28.21022727 0.41078578 0.62386885 0.42137446 0.536257334 TRUE 0.5 0.536257334 TRUE 0.378183007 0.7440127 0.46591553 0.5759635 322710 11331 2255501 2255502 1 97 Same + + 6.3356859 15.920198647 0 2.600100e+01 318.5 1.785126 2.352733 0.7951008 82 Chorismate synthase [Amino acid transport and metabolism] E Chorismate synthase 2.256696 3.004678 0.8900342 - - - probable MFS metabolite transporter TRUE TRUE -32 TRUE 1.2270811936 1.8554607 2.1021150 0.8039394 0.9001864 U 0.5877867 0.8549671 27.19318182 0.44309138 0.81455366 0.45387133 0.777516099 TRUE 0.5 0.777516099 TRUE 0.609568909 0.8549671 0.66242635 0.7336845 322710 11331 2255502 2255503 1 -3 Same + + 0.0000000 -4.582783689 0 -7.527637e+00 318.5 2.256696 3.004678 0.8900342 - - - probable MFS metabolite transporter 1.707103 2.244556 0.8096858 235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] G Class II aldolase/adducin, N-terminal TRUE TRUE -31 TRUE 0.3922770566 0.2508108 0.2266984 0.8039394 0.9001864 U 0.5877867 0.5754169 6.87500000 0.86429110 0.19335724 0.86932250 0.604214304 TRUE 0.5 0.604214304 TRUE 0.535841905 0.5754169 0.15345143 0.3877647 322710 11331 2255503 2255504 1 61 Same + + 37.8253198 62.745118704 0 1.215291e+02 NA 1.707103 2.244556 0.8096858 235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] G Class II aldolase/adducin, N-terminal 1.798720 2.375177 0.8020218 1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] S Acireductone dioxygenase, ARD TRUE TRUE -30 TRUE 4.0890970248 2.7603461 2.7748757 0.8039394 0.5921955 U 0.5877867 0.9567930 23.22159091 0.48773474 0.95063297 0.49862836 0.948278490 TRUE 0.5 0.948278490 TRUE 0.829962081 0.9567930 0.83677552 0.9118857 322710 11331 2255504 2255505 1 3 Same + + 23.0494113 32.274342700 0 7.075933e+01 NA 1.798720 2.375177 0.8020218 1791 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] S Acireductone dioxygenase, ARD 1.854530 2.495624 0.8765342 4229 Predicted enolase-phosphatase [Energy production and conversion] C 2,3-diketo-5-methylthio-1-phosphopentane phosphatase TRUE TRUE -29 TRUE 3.3765674757 2.3595346 2.4105044 0.8039394 0.5921955 U 0.5877867 0.9318485 12.54545455 0.74791380 0.92004759 0.75604202 0.971543529 TRUE 0.5 0.971543529 TRUE 0.919847117 0.9318485 0.79457967 0.8646816 322710 11331 2255505 2255506 1 68 Same + + 0.0000000 -4.312672594 0 -4.312673e+00 NA 1.854530 2.495624 0.8765342 4229 Predicted enolase-phosphatase [Energy production and conversion] C 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2.270100 3.250325 1.1201967 - - - hypothetical protein TRUE TRUE -28 TRUE 0.3922770566 0.2240054 0.2258044 0.8039394 0.5921955 U 0.5877867 0.5482812 24.15909091 0.48636305 0.09932955 0.49725578 0.094553903 FALSE 0.5 0.094553903 FALSE 0.096647989 0.5482812 0.10151754 0.3619347 322710 11331 2255506 2255507 1 212 Same + + 0.0000000 -5.762286165 0 -5.762286e+00 NA 2.270100 3.250325 1.1201967 - - - hypothetical protein 1.852517 2.373666 0.8113677 421 Spermidine synthase [Amino acid transport and metabolism] E Spermine synthase TRUE TRUE -27 TRUE 0.3922770566 0.2379373 0.2477783 0.8039394 0.5921955 U 0.5877867 0.5515529 34.44886364 0.13035565 0.11115690 0.13537659 0.018400673 FALSE 0.5 0.018400673 FALSE 0.017789660 0.5515529 0.10780408 0.3649930 322710 11331 2255507 2255508 1 188 Same + + 0.0000000 -10.530756506 0 -1.087594e+01 NA 1.852517 2.373666 0.8113677 421 Spermidine synthase [Amino acid transport and metabolism] E Spermine synthase 2.083081 2.751928 0.9246232 - - - conserved hypothetical protein TRUE TRUE -26 TRUE 0.3922770566 0.2706102 0.2828661 0.8039394 0.5921955 U 0.5877867 0.5571698 33.40909091 0.17307597 0.13113810 0.17940294 0.030622609 FALSE 0.5 0.030622609 FALSE 0.027386919 0.5571698 0.11858081 0.3702787 322710 11331 2255512 2255513 1 477 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.162968 2.967541 0.9764816 679 Predicted permeases [General function prediction only] R Auxin Efflux Carrier 5.580272 7.789618 1.1212009 - - - hypothetical protein TRUE TRUE -25 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 38.61363636 0.02964284 0.14493487 0.03092253 0.005151324 FALSE 0.5 0.005151324 FALSE 0.004390199 0.5611155 0.12613896 0.3740187 322710 11331 2255513 2255514 1 -125 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 5.580272 7.789618 1.1212009 - - - hypothetical protein NA NA NA TRUE TRUE -24 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 1.22727273 0.51614520 0.14493487 0.52702055 0.153126118 FALSE 0.5 0.153126118 FALSE 0.133433694 0.5611155 0.12613896 0.3740187 322710 11331 2255514 2255515 1 113 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 5.062223 6.950131 1.2252248 - - - hypothetical protein TRUE TRUE -23 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 28.63636364 0.39594807 0.14493487 0.40641809 0.099995885 FALSE 0.5 0.099995885 FALSE 0.086438750 0.5611155 0.12613896 0.3740187 322710 11331 2255515 2255516 1 176 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 5.062223 6.950131 1.2252248 - - - hypothetical protein 1.963683 2.546296 1.1226203 - - - hypothetical protein TRUE TRUE -22 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 32.78977273 0.20112750 0.14493487 0.20822171 0.040927853 FALSE 0.5 0.040927853 FALSE 0.035066953 0.5611155 0.12613896 0.3740187 322710 11331 2255516 2255517 1 -3 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.963683 2.546296 1.1226203 - - - hypothetical protein 4.390670 5.793072 1.0748284 - - - hypothetical protein TRUE TRUE -21 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 6.87500000 0.86429110 0.14493487 0.86932250 0.519116746 TRUE 0.5 0.519116746 TRUE 0.478977457 0.5611155 0.12613896 0.3740187 322710 11331 2255517 2255518 1 396 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 4.390670 5.793072 1.0748284 - - - hypothetical protein 2.529319 3.340692 0.9504142 3335 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L similar to Transposase and inactivated derivatives TRUE TRUE -20 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 38.06250000 0.03718456 0.14493487 0.03877683 0.006503686 FALSE 0.5 0.006503686 FALSE 0.005543858 0.5611155 0.12613896 0.3740187 322710 11331 2255520 2255521 1 151 Same + + 0.0000000 0.009936207 0 9.936207e-03 NA 3.408881 4.572936 1.0101051 - - - hypothetical protein 1.740244 2.329336 0.8144233 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] R Alpha/beta hydrolase fold TRUE TRUE -19 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 31.68750000 0.25499160 0.30486020 0.26335938 0.130513680 FALSE 0.5 0.130513680 FALSE 0.088694019 0.6112941 0.22140087 0.4236152 322710 11331 2255522 2255523 1 -142 Same - - 1.3163358 10.170570156 0 1.148691e+01 NA 1.821218 2.440459 0.8079247 2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only] R Homoserine kinase ThrB 1.744654 2.232192 0.8814387 - - - conserved hypothetical protein FALSE TRUE -19 TRUE -0.0373316108 1.5428477 1.9018978 0.8039394 0.5921955 U 0.5877867 0.7501622 1.07954545 0.49396194 0.63591387 0.50485757 0.630303548 TRUE 0.5 0.630303548 TRUE 0.470969253 0.7501622 0.47699118 0.5838923 322710 11331 2255526 2255527 1 -3 Same + + 47.7528385 83.210909240 0 1.423143e+02 318.5 1.866817 2.512351 0.8527666 1566 Multidrug resistance efflux pump [Defense mechanisms] V Secretion protein HlyD 1.630004 2.166716 0.7390383 1131 ABC-type multidrug transport system, ATPase component [Defense mechanisms] V ABC transporter V TRUE TRUE -19 TRUE 4.4334523647 2.8972467 2.9345265 0.8039394 0.9001864 Y 2.4007771 0.9853862 6.87500000 0.86429110 0.98378717 0.86932250 0.997419026 TRUE 0.5 0.997419026 TRUE 0.979954591 0.9853862 0.88474054 0.9692419 322710 11331 2255527 2255528 1 -3 Same + + 58.8037285 83.200973034 0 1.533892e+02 318.5 1.630004 2.166716 0.7390383 1131 ABC-type multidrug transport system, ATPase component [Defense mechanisms] V ABC transporter 1.593455 2.151235 0.7347946 842 ABC-type multidrug transport system, permease component [Defense mechanisms] V putative membrane protein V TRUE TRUE -18 TRUE 4.6886021930 2.9596518 2.9323034 0.8039394 0.9001864 Y 2.4007771 0.9866706 6.87500000 0.86429110 0.98523134 0.86932250 0.997651827 TRUE 0.5 0.997651827 TRUE 0.980366875 0.9866706 0.88688509 0.9719047 322710 11331 2255528 2255529 1 -3 Same + + 62.5052588 108.624477902 0 1.868590e+02 15.0 1.593455 2.151235 0.7347946 842 ABC-type multidrug transport system, permease component [Defense mechanisms] V putative membrane protein 1.579859 2.134448 0.6930676 842 ABC-type multidrug transport system, permease component [Defense mechanisms] V putative membrane protein V TRUE TRUE -17 TRUE 4.7630524622 3.0890906 3.1478907 0.8039394 2.9766766 Y 2.4007771 0.9943460 6.87500000 0.86429110 0.99378390 0.86932250 0.999018821 TRUE 0.5 0.999018821 TRUE 0.982793388 0.9943460 0.89968304 0.9879792 322710 11331 2255530 2255531 1 374 Same - - 0.0000000 -4.616533945 0 9.936207e-03 NA 1.764041 2.312932 0.8412008 - - - hypothetical protein 1.465550 1.894262 0.8788759 - - - hypothetical protein FALSE TRUE -17 TRUE 0.3922770566 0.5517639 0.2314983 0.8039394 0.5921955 U 0.5877867 0.5616347 37.89772727 0.03972476 0.14673617 0.04142112 0.007063839 FALSE 0.5 0.007063839 FALSE 0.005989169 0.5616347 0.12713292 0.3745125 322710 11331 2255533 2255534 1 -1923 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 9.713423 13.054068 1.2316866 - - - hypothetical protein 1.522947 2.062891 0.7048655 5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms] T GGDEF FALSE TRUE -18 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 0.03409091 0.33114511 0.14493487 0.34086853 0.077421810 FALSE 0.5 0.077421810 FALSE 0.066698386 0.5611155 0.12613896 0.3740187 322710 11331 2255535 2255536 1 613 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.372432 1.806597 0.5974390 210 Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] L UvrD/REP helicase 5.656262 7.531399 1.1438154 - - - hypothetical protein TRUE TRUE -18 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 39.35227273 0.02157892 0.14493487 0.02251858 0.003724407 FALSE 0.5 0.003724407 FALSE 0.003173441 0.5611155 0.12613896 0.3740187 322710 11331 2255539 2255540 1 -726 Same - - 0.0000000 0.000000000 0 0.000000e+00 318.5 3.598335 4.754122 1.0960671 1136 ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] V ABC transporter 1.638168 2.135186 0.7874895 378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] OK conserved hypothetical protein - FALSE TRUE -18 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.9001864 N 0.7317929 0.6020990 0.22727273 0.36084177 0.27754934 0.37095356 0.178233336 FALSE 0.5 0.178233336 FALSE 0.126440461 0.6020990 0.20406284 0.4142347 322710 11331 2255540 2255541 1 -3 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.638168 2.135186 0.7874895 378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] OK conserved hypothetical protein 1.791072 2.366239 0.8130659 - - - hypothetical protein FALSE TRUE -19 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 6.87500000 0.86429110 0.14493487 0.86932250 0.519116746 TRUE 0.5 0.519116746 TRUE 0.478977457 0.5611155 0.12613896 0.3740187 322710 11331 2255541 2255542 1 -3 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 1.791072 2.366239 0.8130659 - - - hypothetical protein 2.083991 2.816112 0.8990659 614 ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism] P Periplasmic binding protein FALSE TRUE -20 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 6.87500000 0.86429110 0.30486020 0.86932250 0.736360616 TRUE 0.5 0.736360616 TRUE 0.644254000 0.6112941 0.22140087 0.4236152 322710 11331 2255543 2255544 1 90 Same + + 0.0000000 0.009936207 0 -1.709872e+00 NA 1.760685 2.328025 0.8482226 - - - bacterial regulatory proteins, TetR family 1.670333 2.187440 0.7678975 4395 Uncharacterized protein conserved in bacteria [Function unknown] S Mitochondrial import inner membrane translocase, subunit Tim44 TRUE TRUE -20 TRUE 0.3922770566 0.2052804 0.6393682 0.8039394 0.5921955 U 0.5877867 0.5983560 26.44886364 0.45673952 0.26619154 0.46757274 0.233704996 FALSE 0.5 0.233704996 FALSE 0.170981064 0.5983560 0.19698995 0.4104549 322710 11331 2255545 2255546 1 446 Same - - 0.0000000 0.000000000 0 -8.111243e-01 NA 1.583914 2.067726 0.7283321 2199 FOG: GGDEF domain [Signal transduction mechanisms] T GGDEF 1.856345 2.428186 0.8724437 - - - Protein of unknown function DUF326 FALSE TRUE -20 TRUE 0.3922770566 0.1988725 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5582298 38.31818182 0.03350914 0.13486368 0.03494973 0.005375700 FALSE 0.5 0.005375700 FALSE 0.004732778 0.5582298 0.12061223 0.3712812 322710 11331 2255549 2255550 1 251 Same + + 0.0000000 -0.381735579 0 -3.817356e-01 318.5 1.526987 2.063900 0.8031609 655 Multimeric flavodoxin WrbA [General function prediction only] R Flavoprotein WrbA 1.629740 2.174325 0.7283085 2199 FOG: GGDEF domain [Signal transduction mechanisms] T GGDEF TRUE TRUE -20 TRUE 0.3922770566 0.1990726 0.2241465 0.8039394 0.9001864 U 0.5877867 0.5731271 35.68750000 0.08895160 0.18576674 0.09254749 0.021790310 FALSE 0.5 0.021790310 FALSE 0.016819024 0.5731271 0.14908711 0.3855435 322710 11331 2255555 2255556 1 -13 Same - - 2.7642379 5.062172693 0 2.119523e+01 318.5 1.505644 1.993244 0.7700361 412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Q conserved hypothetical protein 1.819454 2.423011 0.8310065 - - - conserved hypothetical protein FALSE TRUE -20 TRUE 0.3657005593 1.7626489 1.4597589 0.8039394 0.9001864 U 0.5877867 0.7596929 3.16477273 0.73264901 0.65419632 0.74109904 0.838301006 TRUE 0.5 0.838301006 TRUE 0.728011313 0.7596929 0.49411320 0.5963529 322710 11331 2255557 2255558 1 109 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.787712 2.341516 0.8630333 - - - Protein of unknown function HHE 4.506976 5.929064 1.1174176 - - - hypothetical protein TRUE TRUE -20 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 28.30113636 0.40768360 0.14493487 0.41824907 0.104476831 FALSE 0.5 0.104476831 FALSE 0.090373186 0.5611155 0.12613896 0.3740187 322710 11331 2255558 2255559 1 40 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 4.506976 5.929064 1.1174176 - - - hypothetical protein 1.485208 1.982561 0.7754331 1285 Uncharacterized membrane protein [Function unknown] S MgtC/SapB transporter TRUE TRUE -19 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 20.79545455 0.55190112 0.14493487 0.56265377 0.172710461 FALSE 0.5 0.172710461 FALSE 0.150948357 0.5611155 0.12613896 0.3740187 322710 11331 2255560 2255561 1 -3 Same - - 15.5522903 8.089682168 0 5.277346e+01 10.0 1.629088 2.120549 0.7600955 3667 Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism] P Copper resistance B precursor 1.559212 2.043930 0.7157691 2132 Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] Q Twin-arginine translocation pathway signal:Copper-resistance protein CopA - FALSE TRUE -19 TRUE 2.6200333297 2.1761839 1.7748708 0.8039394 3.2152429 N 0.7317929 0.9516070 6.87500000 0.86429110 0.94440627 0.86932250 0.990841602 TRUE 0.5 0.990841602 TRUE 0.968419551 0.9516070 0.82803006 0.9018625 322710 11331 2255563 2255564 1 107 Same - - 0.0000000 -0.369747026 0 -8.466711e-01 NA 3.643007 4.987127 1.0736234 - - - hypothetical protein 1.607694 2.094654 0.7786950 169 Shikimate 5-dehydrogenase [Amino acid transport and metabolism] E Shikimate/quinate 5-dehydrogenase FALSE TRUE -20 TRUE 0.3922770566 0.1989430 0.2241988 0.8039394 0.5921955 U 0.5877867 0.5471113 28.09659091 0.41462458 0.09506596 0.42524079 0.069256224 FALSE 0.5 0.069256224 FALSE 0.072408661 0.5471113 0.09926792 0.3608448 322710 11331 2255564 2255565 1 77 Same - - 2.1961417 16.637567222 0 2.394289e+01 318.5 1.607694 2.094654 0.7786950 169 Shikimate 5-dehydrogenase [Amino acid transport and metabolism] E Shikimate/quinate 5-dehydrogenase 1.436381 1.866957 0.6895440 408 Coproporphyrinogen III oxidase [Coenzyme metabolism] H Coproporphyrinogen oxidase - FALSE TRUE -21 TRUE 0.2222186648 1.8247439 2.1201367 0.8039394 0.9001864 N 0.7317929 0.8187406 25.07386364 0.47724110 0.75797772 0.48812367 0.740875832 TRUE 0.5 0.740875832 TRUE 0.576966221 0.8187406 0.59903124 0.6785537 322710 11331 2255567 2255568 1 61 Same - - 5.5613638 -22.298178229 0 -1.025630e+01 NA 1.583114 2.133714 0.8408597 9 Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis] J SUA5/yciO/yrdC, N-terminal 1.887533 2.564181 0.8698725 758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion] LU SMF protein - FALSE TRUE -22 TRUE 1.0634896452 0.2658793 0.3399522 0.8039394 0.5921955 N 0.7317929 0.6325695 23.22159091 0.48773474 0.36500835 0.49862836 0.353711939 FALSE 0.5 0.353711939 FALSE 0.251955957 0.6325695 0.26131660 0.4458509 322710 11331 2255568 2255569 1 66 Same - - 38.2158066 70.494772158 0 1.586425e+02 318.5 1.887533 2.564181 0.8698725 758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion] LU SMF protein 1.654069 2.222187 0.7857423 - - - Peptidoglycan-binding LysM FALSE TRUE -23 TRUE 4.1176494101 2.9813580 2.8376567 0.8039394 0.9001864 U 0.5877867 0.9636929 23.93181818 0.48652054 0.95881358 0.49741338 0.956630352 TRUE 0.5 0.956630352 TRUE 0.841321300 0.9636929 0.84838924 0.9253978 322710 11331 2255570 2255571 1 -102 Same + + 148.8762872 347.876450529 0 7.608648e+02 63.0 1.502042 1.921827 0.7498578 242 N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis] J Formylmethionine deformylase 2.079996 2.797776 0.8960001 223 Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis] J Methionyl-tRNA formyltransferase J TRUE TRUE -23 TRUE 5.6906258593 3.8885560 3.9680213 0.8039394 2.1839572 Y 2.4007771 0.9968041 1.35795455 0.53528962 0.99649502 0.54611306 0.996955753 TRUE 0.5 0.996955753 TRUE 0.915389133 0.9968041 0.90377515 0.9931863 322710 11331 2255571 2255572 1 -3 Same + + 117.3920156 288.996393385 0 6.171890e+02 318.5 2.079996 2.797776 0.8960001 223 Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis] J Methionyl-tRNA formyltransferase 1.508940 1.991539 0.7046679 144 tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] J Fmu, rRNA SAM-dependent methyltransferase J TRUE TRUE -22 TRUE 5.4646952079 3.8184316 3.9054086 0.8039394 0.9001864 Y 2.4007771 0.9944315 6.87500000 0.86429110 0.99387840 0.86932250 0.999033816 TRUE 0.5 0.999033816 TRUE 0.982820058 0.9944315 0.89982540 0.9881598 322710 11331 2255572 2255573 1 14 Same + + 11.4133478 130.601723159 0 1.378297e+02 318.5 1.508940 1.991539 0.7046679 144 tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] J Fmu, rRNA SAM-dependent methyltransferase 1.337600 1.755355 0.5996579 569 K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] P TrkA-N:TrkA-C - TRUE TRUE -21 TRUE 2.0602639090 2.8716616 3.4423563 0.8039394 0.9001864 N 0.7317929 0.9500608 16.61931818 0.72303227 0.94253661 0.73167494 0.977178796 TRUE 0.5 0.977178796 TRUE 0.925052384 0.9500608 0.82541983 0.8988957 322710 11331 2255574 2255575 1 91 Same - - 0.0000000 0.000000000 0 0.000000e+00 318.5 1.958925 2.642022 0.8588797 737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] F Metallophosphoesterase:5'-Nucleotidase, C-terminal 3.333898 4.415279 1.0018526 2818 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair] L DNA-3-methyladenine glycosylase I - FALSE TRUE -21 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.9001864 N 0.7317929 0.6020990 26.56818182 0.45504794 0.27754934 0.46587544 0.242881616 FALSE 0.5 0.242881616 FALSE 0.176333691 0.6020990 0.20406284 0.4142347 322710 11331 2255576 2255577 1 -3 Same + + 163.5143768 288.186470251 0 7.974490e+02 2.0 1.402299 1.830637 0.6282637 752 Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis] J Glycyl-tRNA synthetase, alpha subunit 1.385787 1.858480 0.6265083 751 Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis] J Glycyl-tRNA synthetase, beta subunit J TRUE TRUE -21 TRUE 5.8232014307 3.9087085 3.9002134 0.8039394 3.6475777 Y 2.4007771 0.9980880 6.87500000 0.86429110 0.99790576 0.86932250 0.999670586 TRUE 0.5 0.999670586 TRUE 0.983953699 0.9980880 0.90591126 0.9959176 322710 11331 2255577 2255578 1 4 Same + + 10.2718953 -16.110717812 0 8.377818e+01 318.5 1.385787 1.858480 0.6265083 751 Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis] J Glycyl-tRNA synthetase, beta subunit 1.694870 2.191965 0.8282267 241 Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] E Histidinol-phosphate phosphatase:HAD-superfamily hydrolase, subfamily IIIA - TRUE TRUE -20 TRUE 1.8786734116 2.4642613 0.3158810 0.8039394 0.9001864 N 0.7317929 0.7774296 13.04545455 0.74278081 0.68702662 0.75101944 0.863742394 TRUE 0.5 0.863742394 TRUE 0.762043385 0.7774296 0.52583764 0.6201170 322710 11331 2255578 2255579 1 7 Same + + 13.7496327 0.946208397 0 1.072601e+02 318.5 1.694870 2.191965 0.8282267 241 Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] E Histidinol-phosphate phosphatase:HAD-superfamily hydrolase, subfamily IIIA 2.001201 2.646105 0.8518302 204 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] I 1-acylglycerol-3-phosphate O-acyltransferase - TRUE TRUE -19 TRUE 2.3579857892 2.6477796 1.0689419 0.8039394 0.9001864 N 0.7317929 0.8601915 13.91477273 0.74645088 0.82231955 0.75461079 0.931624456 TRUE 0.5 0.931624456 TRUE 0.857513410 0.8601915 0.67150872 0.7419591 322710 11331 2255579 2255580 1 10 Same + + 0.0000000 0.009936207 0 9.936207e-03 NA 2.001201 2.646105 0.8518302 204 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] I 1-acylglycerol-3-phosphate O-acyltransferase 2.551436 3.427363 0.9933944 - - - hypothetical protein TRUE TRUE -18 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 14.80681818 0.74485695 0.30486020 0.75305119 0.561464587 TRUE 0.5 0.561464587 TRUE 0.453595536 0.6112941 0.22140087 0.4236152 322710 11331 2255580 2255581 1 118 Same + + 0.0000000 0.009936207 0 9.936207e-03 NA 2.551436 3.427363 0.9933944 - - - hypothetical protein 2.109160 2.883052 0.8869385 2837 Predicted iron-dependent peroxidase [Inorganic ion transport and metabolism] P Dyp-type peroxidase TRUE TRUE -17 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 29.02272727 0.38168504 0.30486020 0.39202268 0.213045967 FALSE 0.5 0.213045967 FALSE 0.149322640 0.6112941 0.22140087 0.4236152 322710 11331 2255586 2255587 1 19 Same - - 121.5150928 303.102440453 0 7.747181e+02 318.5 2.471322 3.297006 0.9746101 1195 Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair] L RecF protein 1.756733 2.358893 0.8032522 592 DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] L DNA polymerase III, beta chain L FALSE TRUE -17 TRUE 5.4985755134 3.9061866 3.9210149 0.8039394 0.9001864 Y 2.4007771 0.9946102 17.72159091 0.70119950 0.99407591 0.71025043 0.997466968 TRUE 0.5 0.997466968 TRUE 0.954851896 0.9946102 0.90012297 0.9885374 322710 11331 2255587 2255588 1 29 Same - - 151.0417765 421.662359221 0 8.655967e+02 318.5 1.756733 2.358893 0.8032522 592 DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] L DNA polymerase III, beta chain 1.788186 2.377455 0.7975433 593 ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] L chromosomal replication initiator protein, DnaA L FALSE TRUE -18 TRUE 5.7253367070 3.9314418 4.0284920 0.8039394 0.9001864 Y 2.4007771 0.9952792 19.31818182 0.61352745 0.99481468 0.62380929 0.996727389 TRUE 0.5 0.996727389 TRUE 0.935427071 0.9952792 0.90123687 0.9899525 322710 11331 2255589 2255590 1 87 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 8.641712 11.582444 1.1042258 - - - hypothetical protein 1.790341 2.306397 1.0312310 - - - Ribosomal protein L34 TRUE TRUE -18 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 26.14204545 0.46067970 0.14493487 0.47152526 0.126474149 FALSE 0.5 0.126474149 FALSE 0.109764991 0.5611155 0.12613896 0.3740187 322710 11331 2255590 2255591 1 15 Same + + 48.4514262 175.583406965 0 2.345597e+02 318.5 1.790341 2.306397 1.0312310 - - - Ribosomal protein L34 2.323768 3.134914 0.9873270 594 RNase P protein component [Translation, ribosomal structure and biogenesis] J ribonuclease P protein TRUE TRUE -17 TRUE 4.4633872593 3.2652002 3.6625303 0.8039394 0.9001864 U 0.5877867 0.9792111 16.94886364 0.71820031 0.97679104 0.72693681 0.990763258 TRUE 0.5 0.990763258 TRUE 0.946654881 0.9792111 0.87441806 0.9565459 322710 11331 2255591 2255592 1 -7 Same + + 38.3894068 55.468154915 0 1.017980e+02 318.5 2.323768 3.134914 0.9873270 594 RNase P protein component [Translation, ribosomal structure and biogenesis] J ribonuclease P protein 2.508036 3.395087 1.0160891 759 Uncharacterized conserved protein [Function unknown] S Protein of unknown function DUF37 TRUE TRUE -16 TRUE 4.1291028424 2.5996169 2.6981310 0.8039394 0.9001864 U 0.5877867 0.9590191 4.01704545 0.78535787 0.95328506 0.79261353 0.986783927 TRUE 0.5 0.986783927 TRUE 0.950701546 0.9590191 0.84052507 0.9162228 322710 11331 2255592 2255593 1 3 Same + + 71.4173701 85.447221290 0 2.500965e+02 318.5 2.508036 3.395087 1.0160891 759 Uncharacterized conserved protein [Function unknown] S Protein of unknown function DUF37 1.601228 2.108835 0.7155335 706 Preprotein translocase subunit YidC [Intracellular trafficking and secretion] U 60 kDa inner membrane protein TRUE TRUE -15 TRUE 4.9649887855 3.3320929 2.9545787 0.8039394 0.9001864 U 0.5877867 0.9752404 12.54545455 0.74791380 0.97224556 0.75604202 0.990469947 TRUE 0.5 0.990469947 TRUE 0.951149201 0.9752404 0.86776996 0.9484740 322710 11331 2255593 2255594 1 67 Same + + 69.6088501 127.386341668 0 2.589835e+02 318.5 1.601228 2.108835 0.7155335 706 Preprotein translocase subunit YidC [Intracellular trafficking and secretion] U 60 kDa inner membrane protein 1.841793 2.421450 0.7999974 486 Predicted GTPase [General function prediction only] R tRNA modification GTPase TrmE:Small GTP-binding protein domain:GTP-binding domain TRUE TRUE -14 TRUE 4.9203905462 3.3693223 3.3962969 0.8039394 0.9001864 U 0.5877867 0.9798946 24.04545455 0.48648072 0.97756970 0.49737353 0.976352506 TRUE 0.5 0.976352506 TRUE 0.869547472 0.9798946 0.87556151 0.9579425 322710 11331 2255594 2255595 1 146 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.841793 2.421450 0.7999974 486 Predicted GTPase [General function prediction only] R tRNA modification GTPase TrmE:Small GTP-binding protein domain:GTP-binding domain 3.200315 4.126204 1.0042968 - - - hypothetical protein TRUE TRUE -13 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 31.30113636 0.27510253 0.14493487 0.28387880 0.060438923 FALSE 0.5 0.060438923 FALSE 0.051935323 0.5611155 0.12613896 0.3740187 322710 11331 2255595 2255596 1 -292 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 3.200315 4.126204 1.0042968 - - - hypothetical protein 1.812114 2.443618 0.8546663 - - - Phage integrase TRUE TRUE -12 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 0.63636364 0.42509844 0.14493487 0.43578319 0.111375120 FALSE 0.5 0.111375120 FALSE 0.096440539 0.5611155 0.12613896 0.3740187 322710 11331 2255596 2255597 1 167 Same + + 0.0000000 0.009936207 0 9.936207e-03 318.5 1.812114 2.443618 0.8546663 - - - Phage integrase 3.264830 4.492769 1.0070095 4190 Predicted transcriptional regulator [Transcription] K conserved hypothetical protein TRUE TRUE -11 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.9001864 U 0.5877867 0.6360767 32.38068182 0.22033031 0.37453725 0.22790860 0.144730523 FALSE 0.5 0.144730523 FALSE 0.093706123 0.6360767 0.26786976 0.4495896 322710 11331 2255597 2255598 1 27 Same + + 1.7190001 0.009936207 0 1.728936e+00 NA 3.264830 4.492769 1.0070095 4190 Predicted transcriptional regulator [Transcription] K conserved hypothetical protein 2.920465 3.903701 0.9755377 4127 Uncharacterized conserved protein [Function unknown] S Restriction endonuclease TRUE TRUE -10 TRUE 0.1759801452 0.9500689 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6090251 19.01136364 0.63239016 0.29819768 0.64246261 0.422282431 FALSE 0.5 0.422282431 FALSE 0.323003954 0.6090251 0.21712748 0.4212878 322710 11331 2255598 2255599 1 -52 Same + + 0.0000000 0.009936207 0 -6.324314e-03 NA 2.920465 3.903701 0.9755377 4127 Uncharacterized conserved protein [Function unknown] S Restriction endonuclease 3.002648 3.951529 1.0084347 553 Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] KL SNF2 related domain:DEAD/DEAH box helicase:Helicase, C-terminal:Type III restriction enzyme, res subunit TRUE TRUE -9 TRUE 0.3922770566 0.2052846 0.6393682 0.8039394 0.5921955 U 0.5877867 0.5983562 1.79545455 0.59526643 0.26619201 0.60572188 0.347907579 FALSE 0.5 0.347907579 FALSE 0.265137940 0.5983562 0.19699024 0.4104550 322710 11331 2255599 2255600 1 -3 Same + + 0.0000000 0.009936207 0 9.936207e-03 NA 3.002648 3.951529 1.0084347 553 Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] KL SNF2 related domain:DEAD/DEAH box helicase:Helicase, C-terminal:Type III restriction enzyme, res subunit 5.360808 7.091714 1.0992841 - - - hypothetical protein TRUE TRUE -8 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 6.87500000 0.86429110 0.30486020 0.86932250 0.736360616 TRUE 0.5 0.736360616 TRUE 0.644254000 0.6112941 0.22140087 0.4236152 322710 11331 2255600 2255601 1 -10 Same + + 1.9420763 3.687837094 0 5.629913e+00 NA 5.360808 7.091714 1.0992841 - - - hypothetical protein 3.867481 4.873965 0.9751267 - - - hypothetical protein TRUE TRUE -7 TRUE 0.1984019657 1.2415106 1.3655676 0.8039394 0.5921955 U 0.5877867 0.7028922 3.51136364 0.75655239 0.53791016 0.76448978 0.783435827 TRUE 0.5 0.783435827 TRUE 0.666402717 0.7028922 0.39128586 0.5250798 322710 11331 2255601 2255602 1 62 Same + + 0.0000000 0.009936207 0 9.936207e-03 NA 3.867481 4.873965 0.9751267 - - - hypothetical protein 5.574439 7.201569 1.1059207 - - - hypothetical protein TRUE TRUE -6 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6112941 23.35795455 0.48710485 0.30486020 0.49799807 0.294038137 FALSE 0.5 0.294038137 FALSE 0.212635235 0.6112941 0.22140087 0.4236152 322710 11331 2255602 2255603 1 13 Same + + 1.1574528 0.009936207 0 1.167389e+00 NA 5.574439 7.201569 1.1059207 - - - hypothetical protein 5.133775 6.754564 1.1372613 2189 Adenine specific DNA methylase Mod [DNA replication, recombination, and repair] L DNA methylase N-4/N-6 TRUE TRUE -5 TRUE -0.0856663562 0.8907006 0.6393682 0.8039394 0.5921955 U 0.5877867 0.5859195 16.19886364 0.72825379 0.22741213 0.73679283 0.440976283 FALSE 0.5 0.440976283 FALSE 0.359910328 0.5859195 0.17342658 0.3980533 322710 11331 2255603 2255604 1 0 Same + + 1.3705460 0.009936207 0 -1.215493e+00 NA 5.133775 6.754564 1.1372613 2189 Adenine specific DNA methylase Mod [DNA replication, recombination, and repair] L DNA methylase N-4/N-6 3.373064 4.283612 0.9412491 3943 Virulence protein [General function prediction only] R putative cytoplasmic protein TRUE TRUE -4 TRUE -0.0051537256 0.2017508 0.6393682 0.8039394 0.5921955 U 0.5877867 0.5661585 9.88068182 0.82204981 0.16228919 0.82833625 0.472279511 FALSE 0.5 0.472279511 FALSE 0.420565580 0.5661585 0.13578494 0.3788317 322710 11331 2255604 2255605 1 -3 Same + + 1.3705460 0.009936207 0 5.520997e-01 NA 3.373064 4.283612 0.9412491 3943 Virulence protein [General function prediction only] R putative cytoplasmic protein 2.549598 3.338824 0.9380085 1061 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] KL Type III restriction enzyme, res subunit TRUE TRUE -3 TRUE -0.0051537256 0.8471403 0.6393682 0.8039394 0.5921955 U 0.5877867 0.5907415 6.87500000 0.86429110 0.24264176 0.86932250 0.671096200 TRUE 0.5 0.671096200 TRUE 0.587198093 0.5907415 0.18257426 0.4028333 322710 11331 2255606 2255607 1 50 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 3.351538 4.345480 1.0268300 - - - putative integrase 6.583795 9.236498 1.2012483 - - - hypothetical protein FALSE TRUE -3 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 22.05681818 0.51110807 0.14493487 0.52199178 0.150529570 FALSE 0.5 0.150529570 FALSE 0.131119368 0.5611155 0.12613896 0.3740187 322710 11331 2255608 2255609 1 312 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 4.936700 6.544314 1.1178220 - - - hypothetical protein 2.292132 3.051653 0.9357458 - - - hypothetical protein TRUE TRUE -3 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 37.05681818 0.05497557 0.14493487 0.05728433 0.009764253 FALSE 0.5 0.009764253 FALSE 0.008327257 0.5611155 0.12613896 0.3740187 322710 11331 2255609 2255610 1 417 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.292132 3.051653 0.9357458 - - - hypothetical protein 4.201538 5.833322 1.1189513 - - - hypothetical protein TRUE TRUE -2 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 38.22159091 0.03486053 0.14493487 0.03635704 0.006085088 FALSE 0.5 0.006085088 FALSE 0.005186715 0.5611155 0.12613896 0.3740187 322710 11331 2255610 2255611 1 158 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 4.201538 5.833322 1.1189513 - - - hypothetical protein 4.503383 6.208836 1.1340500 - - - hypothetical protein TRUE TRUE -1 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 31.99431818 0.23934196 0.14493487 0.24736670 0.050633393 FALSE 0.5 0.050633393 FALSE 0.043445612 0.5611155 0.12613896 0.3740187 322710 11331 2255611 2255612 1 351 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 4.503383 6.208836 1.1340500 - - - hypothetical protein 1.661241 2.177698 0.7336140 445 NAD/FAD-utilizing enzyme apparently involved in cell division [Cell division and chromosome partitioning] D Glucose-inhibited division protein A subfamily TRUE TRUE 0 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 37.71022727 0.04278676 0.14493487 0.04460780 0.007519627 FALSE 0.5 0.007519627 FALSE 0.006410832 0.5611155 0.12613896 0.3740187 322710 11331 2255612 2255613 1 0 Same + + 102.3769679 335.250138257 0 5.784455e+02 318.5 1.661241 2.177698 0.7336140 445 NAD/FAD-utilizing enzyme apparently involved in cell division [Cell division and chromosome partitioning] D Glucose-inhibited division protein A subfamily 2.232926 2.973737 0.9444404 357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] M Glucose inhibited division protein - TRUE TRUE 1 TRUE 5.3504362725 3.7960278 3.9575512 0.8039394 0.9001864 N 0.7317929 0.9883503 9.88068182 0.82204981 0.98711442 0.82833625 0.997182192 TRUE 0.5 0.997182192 TRUE 0.973861525 0.9883503 0.88968852 0.9753989 322710 11331 2255613 2255614 1 19 Same + + 106.0989421 144.305420925 0 4.021141e+02 318.5 2.232926 2.973737 0.9444404 357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] M Glucose inhibited division protein 1.712369 2.271042 0.7972919 1192 ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] D ATPase, ParA type - TRUE TRUE 2 TRUE 5.3838922693 3.6703412 3.5428853 0.8039394 0.9001864 N 0.7317929 0.9855692 17.72159091 0.70119950 0.98399316 0.71025043 0.993115806 TRUE 0.5 0.993115806 TRUE 0.947555261 0.9855692 0.88504614 0.9696208 322710 11331 2255614 2255615 1 10 Same + + 231.1295197 405.405971238 0 9.996915e+02 318.5 1.712369 2.271042 0.7972919 1192 ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] D ATPase, ParA type 2.005227 2.628681 0.8639971 1475 Predicted transcriptional regulators [Transcription] K ParB-like partition protein - TRUE TRUE 3 TRUE 6.1445447024 3.9847387 4.0126732 0.8039394 0.9001864 N 0.7317929 0.9915192 14.80681818 0.74485695 0.99064951 0.75305119 0.996777275 TRUE 0.5 0.996777275 TRUE 0.961355763 0.9915192 0.89497328 0.9820268 322710 11331 2255615 2255616 1 133 Same + + 3.4318182 47.853300003 0 4.817574e+01 318.5 2.005227 2.628681 0.8639971 1475 Predicted transcriptional regulators [Transcription] K ParB-like partition protein 3.547880 4.807760 1.0848608 3312 F0F1-type ATP synthase, subunit I [Energy production and conversion] C ATP synthase I chain - TRUE TRUE 4 TRUE 0.5710935133 2.1317489 2.6040746 0.8039394 0.9001864 N 0.7317929 0.8715515 30.38636364 0.32218981 0.83888460 0.33178071 0.712227226 TRUE 0.5 0.712227226 TRUE 0.515504114 0.8715515 0.69120585 0.7602484 322710 11331 2255616 2255617 1 16 Same + + 5.9037376 85.636989171 0 1.012856e+02 8.0 3.547880 4.807760 1.0848608 3312 F0F1-type ATP synthase, subunit I [Energy production and conversion] C ATP synthase I chain 1.751448 2.247029 0.7663271 356 F0F1-type ATP synthase, subunit a [Energy production and conversion] C H+-transporting two-sector ATPase, A subunit C TRUE TRUE 5 TRUE 1.1453125589 2.5976228 2.9612806 0.8039394 3.3307121 Y 2.4007771 0.9805479 17.22159091 0.71348015 0.97831305 0.72230640 0.991176427 TRUE 0.5 0.991176427 TRUE 0.946519230 0.9805479 0.87665436 0.9592795 322710 11331 2255617 2255618 1 54 Same + + 23.4009138 198.913893763 0 3.229329e+02 16.0 1.751448 2.247029 0.7663271 356 F0F1-type ATP synthase, subunit a [Energy production and conversion] C H+-transporting two-sector ATPase, A subunit 2.867573 3.799302 0.9493002 - - - ATP synthase F0, C subunit TRUE TRUE 6 TRUE 3.4123887120 3.5252844 3.7383636 0.8039394 2.9359688 U 0.5877867 0.9863528 22.51136364 0.49831747 0.98487439 0.50921250 0.984773802 TRUE 0.5 0.984773802 TRUE 0.885674891 0.9863528 0.88635458 0.9712452 322710 11331 2255618 2255619 1 94 Same + + 27.5569519 269.608297934 0 4.031114e+02 13.0 2.867573 3.799302 0.9493002 - - - ATP synthase F0, C subunit 2.474493 3.164225 0.9217479 711 F0F1-type ATP synthase, subunit b [Energy production and conversion] C ATP synthase F0, subunit B TRUE TRUE 7 TRUE 3.6159488848 3.6752291 3.8691159 0.8039394 3.0450374 U 0.5877867 0.9887331 26.88636364 0.44975271 0.98754265 0.46056071 0.984801436 TRUE 0.5 0.984801436 TRUE 0.869030939 0.9887331 0.89032718 0.9761970 322710 11331 2255621 2255622 1 51 Same + + 284.5755432 510.107884988 0 1.467787e+03 13.0 1.631801 2.165614 0.7019439 56 F0F1-type ATP synthase, alpha subunit [Energy production and conversion] C ATP synthase F1, alpha subunit 1.695323 2.237141 0.7663521 224 F0F1-type ATP synthase, gamma subunit [Energy production and conversion] C H+-transporting two-sector ATPase, gamma subunit C TRUE TRUE 8 TRUE 6.2686541412 4.0769193 4.1267201 0.8039394 3.0450374 Y 2.4007771 0.9982370 22.17613636 0.50761678 0.99806924 0.51850498 0.998127072 TRUE 0.5 0.998127072 TRUE 0.908718197 0.9982370 0.90615910 0.9962350 322710 11331 2255622 2255623 1 32 Same + + 250.6675424 483.901063081 0 1.261787e+03 13.0 1.695323 2.237141 0.7663521 224 F0F1-type ATP synthase, gamma subunit [Energy production and conversion] C H+-transporting two-sector ATPase, gamma subunit 1.444374 1.896671 0.6013941 55 F0F1-type ATP synthase, beta subunit [Energy production and conversion] C ATP synthase F1, beta subunit C TRUE TRUE 9 TRUE 6.1663376955 4.0230230 4.1027197 0.8039394 3.0450374 Y 2.4007771 0.9981385 19.82954545 0.58618510 0.99796123 0.59671621 0.998559877 TRUE 0.5 0.998559877 TRUE 0.931751254 0.9981385 0.90599535 0.9960253 322710 11331 2255623 2255624 1 78 Same + + 215.0190103 455.218631453 0 1.078358e+03 13.0 1.444374 1.896671 0.6013941 55 F0F1-type ATP synthase, beta subunit [Energy production and conversion] C ATP synthase F1, beta subunit 1.539568 2.064660 0.8468467 355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) [Energy production and conversion] C H+-transporting two-sector ATPase, delta/epsilon subunit C TRUE TRUE 10 TRUE 6.0938750387 4.0025825 4.0655224 0.8039394 3.0450374 Y 2.4007771 0.9980512 25.19886364 0.47457234 0.99786541 0.48545057 0.997637206 TRUE 0.5 0.997637206 TRUE 0.896802146 0.9980512 0.90585010 0.9958392 322710 11331 2255625 2255626 1 11 Same - - 1.3163358 0.426574615 0 2.806431e+00 318.5 1.795415 2.375647 0.7998164 3488 Predicted thiol oxidoreductase [Energy production and conversion] C thiol oxidoreductase 1.798590 2.396196 0.8055160 1840 ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism] P putative regulatory lipoprotein - FALSE TRUE 10 TRUE -0.0373316108 1.0269689 1.0057590 0.8039394 0.9001864 N 0.7317929 0.6763596 15.23863636 0.73912630 0.47689830 0.74744218 0.720905930 TRUE 0.5 0.720905930 TRUE 0.596210804 0.6763596 0.34259955 0.4940970 322710 11331 2255626 2255627 1 12 Same - - 1.3163358 -0.568438238 0 1.550692e+00 215.0 1.798590 2.396196 0.8055160 1840 ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism] P putative regulatory lipoprotein 1.557696 2.037909 0.6777840 4206 Outer membrane cobalamin receptor protein [Coenzyme metabolism] H TonB-dependent receptor - FALSE TRUE 9 TRUE -0.0373316108 0.9380952 0.2236458 0.8039394 1.6661175 N 0.7317929 0.6440206 15.71590909 0.73364663 0.39573653 0.74207623 0.643351829 TRUE 0.5 0.643351829 TRUE 0.520493690 0.6440206 0.28268479 0.4581364 322710 11331 2255628 2255629 1 -79 Same + + 2.4838238 27.146273380 0 2.963010e+01 NA 1.894877 2.529783 0.8548535 - - - conserved hypothetical protein 1.507359 2.016241 0.6838256 4457 Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown] S hypothetical protein TRUE TRUE 9 TRUE 0.3002147339 1.9029365 2.3423592 0.8039394 0.5921955 U 0.5877867 0.8159393 1.57954545 0.56652888 0.75339357 0.57719941 0.799712259 TRUE 0.5 0.799712259 TRUE 0.656703331 0.8159393 0.59409847 0.6744473 322710 11331 2255629 2255630 1 -3 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.507359 2.016241 0.6838256 4457 Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown] S hypothetical protein 4.680014 6.455305 1.1808593 - - - hypothetical protein TRUE TRUE 10 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 6.87500000 0.86429110 0.14493487 0.86932250 0.519116746 TRUE 0.5 0.519116746 TRUE 0.478977457 0.5611155 0.12613896 0.3740187 322710 11331 2255630 2255631 1 -13 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 4.680014 6.455305 1.1808593 - - - hypothetical protein 1.440671 1.910083 0.6472080 - - - hypothetical protein TRUE TRUE 11 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 3.16477273 0.73264901 0.14493487 0.74109904 0.317174167 FALSE 0.5 0.317174167 FALSE 0.283445828 0.5611155 0.12613896 0.3740187 322710 11331 2255631 2255632 1 4 Same + + 1.5533484 2.202231799 0 3.755580e+00 NA 1.440671 1.910083 0.6472080 - - - hypothetical protein 1.527480 2.059505 0.7281541 - - - conserved hypothetical protein TRUE TRUE 12 TRUE 0.0858027873 1.0996283 1.1876257 0.8039394 0.5921955 U 0.5877867 0.6708788 13.04545455 0.74278081 0.46369359 0.75101944 0.714020332 TRUE 0.5 0.714020332 TRUE 0.589893846 0.6708788 0.33248972 0.4878667 322710 11331 2255632 2255633 1 24 Same + + 1.5533484 2.202231799 0 3.755580e+00 NA 1.527480 2.059505 0.7281541 - - - conserved hypothetical protein 1.444866 1.901477 0.6452448 - - - ppkA-related protein TRUE TRUE 13 TRUE 0.0858027873 1.0996283 1.1876257 0.8039394 0.5921955 U 0.5877867 0.6708788 18.52272727 0.66245694 0.46369359 0.67213269 0.629198707 TRUE 0.5 0.629198707 TRUE 0.494329401 0.6708788 0.33248972 0.4878667 322710 11331 2255635 2255636 1 -10 Same + + 2.4838238 20.618629221 0 2.310245e+01 318.5 1.468770 1.939580 0.7707609 1136 ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] V ABC transporter 1.749712 2.350359 0.8093657 4591 ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane] M Protein of unknown function DUF214 - TRUE TRUE 14 TRUE 0.3002147339 1.8007097 2.2369178 0.8039394 0.9001864 N 0.7317929 0.8304255 3.51136364 0.75655239 0.77676571 0.76448978 0.915350432 TRUE 0.5 0.915350432 TRUE 0.835008601 0.8304255 0.61955943 0.6959194 322710 11331 2255636 2255637 1 -43 Same + + 1.5533484 20.618629221 0 2.167050e+01 318.5 1.749712 2.350359 0.8093657 4591 ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane] M Protein of unknown function DUF214 1.532790 2.007814 0.7024142 1262 Uncharacterized conserved protein [Function unknown] S Protein of unknown function DUF323 TRUE TRUE 15 TRUE 0.0858027873 1.7721188 2.2369178 0.8039394 0.9001864 U 0.5877867 0.8100179 1.98863636 0.61939861 0.74359934 0.62961855 0.825167428 TRUE 0.5 0.825167428 TRUE 0.695254545 0.8100179 0.58365717 0.6658382 322710 11331 2255637 2255638 1 25 Same + + 2.4838238 2.202231799 0 4.686056e+00 NA 1.532790 2.007814 0.7024142 1262 Uncharacterized conserved protein [Function unknown] S Protein of unknown function DUF323 1.604136 2.133761 0.7796603 - - - lipoprotein, putative TRUE TRUE 16 TRUE 0.3002147339 1.1732813 1.1876257 0.8039394 0.5921955 U 0.5877867 0.6888643 18.69886364 0.65185366 0.50623833 0.66167813 0.657495200 TRUE 0.5 0.657495200 TRUE 0.519002547 0.6888643 0.36559756 0.5085266 322710 11331 2255638 2255639 1 4 Same + + 2.4838238 2.202231799 0 4.686056e+00 NA 1.604136 2.133761 0.7796603 - - - lipoprotein, putative 1.486218 1.903220 0.7472742 - - - lipoprotein, putative TRUE TRUE 17 TRUE 0.3002147339 1.1732813 1.1876257 0.8039394 0.5921955 U 0.5877867 0.6888643 13.04545455 0.74278081 0.50623833 0.75101944 0.747519622 TRUE 0.5 0.747519622 TRUE 0.624647533 0.6888643 0.36559756 0.5085266 322710 11331 2255639 2255640 1 16 Same + + 1.5533484 0.009936207 0 1.563285e+00 NA 1.486218 1.903220 0.7472742 - - - lipoprotein, putative 1.554053 2.096077 0.7324172 810 Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane] M von Willebrand factor, type A TRUE TRUE 18 TRUE 0.0858027873 0.9399281 0.6393682 0.8039394 0.5921955 U 0.5877867 0.6014977 17.22159091 0.71348015 0.27573426 0.72230640 0.486659671 FALSE 0.5 0.486659671 FALSE 0.387994046 0.6014977 0.20292719 0.4136260 322710 11331 2255641 2255642 1 -3 Same - - 4.0481875 20.194953858 0 2.543528e+01 318.5 1.653780 2.202083 0.7595637 1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] R ABC transporter 1.711910 2.344520 0.8708168 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP Binding-protein-dependent transport systems inner membrane component FALSE TRUE 18 TRUE 0.7116760459 1.8497793 2.2219804 0.8039394 0.9001864 U 0.5877867 0.8405637 6.87500000 0.86429110 0.79264349 0.86932250 0.960544674 TRUE 0.5 0.960544674 TRUE 0.917971410 0.8405637 0.63730844 0.7113035 322710 11331 2255642 2255643 1 -3 Same - - 4.0481875 20.194953858 0 2.543528e+01 215.0 1.711910 2.344520 0.8708168 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP Binding-protein-dependent transport systems inner membrane component 1.304073 1.738861 0.6317965 601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP Binding-protein-dependent transport systems inner membrane component EP FALSE TRUE 17 TRUE 0.7116760459 1.8497793 2.2219804 0.8039394 1.6661175 Y 2.4007771 0.9380268 6.87500000 0.86429110 0.92777457 0.86932250 0.987924099 TRUE 0.5 0.987924099 TRUE 0.963372192 0.9380268 0.80506151 0.8761396 322710 11331 2255643 2255644 1 -3 Same - - 7.7585330 18.713349317 0 2.766402e+01 215.0 1.304073 1.738861 0.6317965 601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP Binding-protein-dependent transport systems inner membrane component 1.536665 2.039641 0.7267668 747 ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism] E extracellular solute-binding protein, family 5 E FALSE TRUE 16 TRUE 1.4695110482 1.8766542 2.1876871 0.8039394 1.6661175 Y 2.4007771 0.9505229 6.87500000 0.86429110 0.94309605 0.86932250 0.990614884 TRUE 0.5 0.990614884 TRUE 0.968025813 0.9505229 0.82620010 0.8997814 322710 11331 2255644 2255645 1 0 Same - - 1.0635210 -1.177229479 0 -3.744348e-01 318.5 1.536665 2.039641 0.7267668 747 ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism] E extracellular solute-binding protein, family 5 1.544860 2.067855 0.7053763 4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism] P TonB-dependent siderophore receptor - FALSE TRUE 15 TRUE -0.0929329648 0.1991754 0.2228552 0.8039394 0.9001864 N 0.7317929 0.5488179 9.88068182 0.82204981 0.10127935 0.82833625 0.342360557 FALSE 0.5 0.342360557 FALSE 0.345491203 0.5488179 0.10254925 0.3624354 322710 11331 2255646 2255647 1 12 Same + + 0.0000000 0.009936207 0 -2.812608e-01 318.5 1.461212 1.922607 0.6830553 1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] M UDP-N-acetylglucosamine pyrophosphorylase 1.512218 1.985078 0.6764771 - - - Ankyrin TRUE TRUE 15 TRUE 0.3922770566 0.2004312 0.6393682 0.8039394 0.9001864 U 0.5877867 0.6232776 15.71590909 0.73364663 0.33924410 0.74207623 0.585778053 TRUE 0.5 0.585778053 TRUE 0.470505867 0.6232776 0.24391809 0.4360468 322710 11331 2255647 2255648 1 183 Same + + 0.0000000 0.009936207 0 9.936207e-03 318.5 1.512218 1.985078 0.6764771 - - - Ankyrin 1.521431 2.060092 0.7650755 1349 Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] KG regulatory protein, DeoR TRUE TRUE 16 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.9001864 U 0.5877867 0.6360767 33.15340909 0.18447829 0.37453725 0.19112574 0.119297792 FALSE 0.5 0.119297792 FALSE 0.076438297 0.6360767 0.26786976 0.4495896 322710 11331 2255648 2255649 1 15 Same + + 3.1578511 50.128903538 0 5.526301e+01 318.5 1.521431 2.060092 0.7650755 1349 Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] KG regulatory protein, DeoR 1.409116 1.865519 0.6414354 449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] M Glucosamine-fructose-6-phosphate aminotransferase, isomerising - TRUE TRUE 17 TRUE 0.5335230919 2.1977105 2.6247947 0.8039394 0.9001864 N 0.7317929 0.8724724 16.94886364 0.71820031 0.84020856 0.72693681 0.930560597 TRUE 0.5 0.930560597 TRUE 0.851800385 0.8724724 0.69279952 0.7617492 322710 11331 2255649 2255650 1 485 Same + + 0.0000000 -4.789873405 0 -1.634033e-01 318.5 1.409116 1.865519 0.6414354 449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] M Glucosamine-fructose-6-phosphate aminotransferase, isomerising 9.719632 12.901005 1.1503539 - - - similar to Superfamily I DNA and RNA helicases and helicase subunits TRUE TRUE 18 TRUE 0.3922770566 0.2022627 0.2397496 0.8039394 0.9001864 U 0.5877867 0.5751660 38.67045455 0.02894381 0.19252843 0.03019427 0.007056730 FALSE 0.5 0.007056730 FALSE 0.005354249 0.5751660 0.15297335 0.3875209 322710 11331 2255650 2255651 1 10 Same + + 0.0000000 5.401174752 0 5.401175e+00 318.5 9.719632 12.901005 1.1503539 - - - similar to Superfamily I DNA and RNA helicases and helicase subunits 10.420809 13.900216 1.1167770 1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism] I hypothetical protein TRUE TRUE 19 TRUE 0.3922770566 1.2236548 1.4842467 0.8039394 0.9001864 U 0.5877867 0.7479874 14.80681818 0.74485695 0.63167683 0.75305119 0.833520343 TRUE 0.5 0.833520343 TRUE 0.723836182 0.7479874 0.47307683 0.5810784 322710 11331 2255654 2255655 1 488 Same - - 0.0000000 -4.616533945 0 9.936207e-03 318.5 3.342843 4.574539 1.0551897 1525 Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair] L Staphylococcus nuclease (SNase-like) 1.791920 2.419925 0.8389361 1609 Transcriptional regulators [Transcription] K regulatory protein, LacI:Periplasmic binding protein/LacI transcriptional regulator - FALSE TRUE 19 TRUE 0.3922770566 0.5517639 0.2314983 0.8039394 0.9001864 N 0.7317929 0.6026042 38.71022727 0.02846276 0.27907127 0.02969307 0.011213542 FALSE 0.5 0.011213542 FALSE 0.007498593 0.6026042 0.20501666 0.4147465 322710 11331 2255655 2255656 1 94 Same - - 0.0000000 0.000000000 0 0.000000e+00 318.5 1.791920 2.419925 0.8389361 1609 Transcriptional regulators [Transcription] K regulatory protein, LacI:Periplasmic binding protein/LacI transcriptional regulator 3.651424 4.842454 1.0881159 1621 Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] G Sucrose-6-phosphate hydrolase - FALSE TRUE 18 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.9001864 N 0.7317929 0.6020990 26.88636364 0.44975271 0.27754934 0.46056071 0.238972629 FALSE 0.5 0.238972629 FALSE 0.173250655 0.6020990 0.20406284 0.4142347 322710 11331 2255656 2255657 1 -1323 Same - - 0.0000000 0.000000000 0 0.000000e+00 318.5 3.651424 4.842454 1.0881159 1621 Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] G Sucrose-6-phosphate hydrolase 1.451032 1.947988 0.6832937 2223 Nitrate/nitrite transporter [Inorganic ion transport and metabolism] P Proton/sugar symporter, LacY - FALSE TRUE 17 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.9001864 N 0.7317929 0.6020990 0.10227273 0.34154668 0.27754934 0.35141506 0.166164251 FALSE 0.5 0.166164251 FALSE 0.117377587 0.6020990 0.20406284 0.4142347 322710 11331 2255658 2255659 1 561 Same + + 0.0000000 -4.616533945 0 9.936207e-03 318.5 2.518561 3.271993 0.9469078 4580 Maltoporin (phage lambda and maltose receptor) [Carbohydrate transport and metabolism] G Porin, LamB type 4.537648 5.879280 1.0570214 - - - alpha-glucosidase TRUE TRUE 17 TRUE 0.3922770566 0.5517639 0.2314983 0.8039394 0.9001864 U 0.5877867 0.5874468 39.09090909 0.02418832 0.23226273 0.02523867 0.007443239 FALSE 0.5 0.007443239 FALSE 0.005278379 0.5874468 0.17632543 0.3995634 322710 11331 2255661 2255662 1 188 Same + + 0.0000000 0.009936207 0 9.936207e-03 318.5 3.739483 5.042271 1.0594019 - - - hypothetical protein 2.267381 3.059262 0.9440219 3004 Na+/H+ antiporter [Inorganic ion transport and metabolism] P Na+/H+ antiporter NhaA TRUE TRUE 18 TRUE 0.3922770566 0.5517639 0.6393682 0.8039394 0.9001864 U 0.5877867 0.6360767 33.40909091 0.17307597 0.37453725 0.17940294 0.111373988 FALSE 0.5 0.111373988 FALSE 0.071131315 0.6360767 0.26786976 0.4495896 322710 11331 2255662 2255663 1 107 Same + + 0.0000000 -0.274007544 0 -2.740075e-01 318.5 2.267381 3.059262 0.9440219 3004 Na+/H+ antiporter [Inorganic ion transport and metabolism] P Na+/H+ antiporter NhaA 1.556799 2.067721 0.7106577 1330 Exonuclease V gamma subunit [DNA replication, recombination, and repair] L Exodeoxyribonuclease V, RecC subunit - TRUE TRUE 19 TRUE 0.3922770566 0.2006293 0.2254063 0.8039394 0.9001864 N 0.7317929 0.5886542 28.09659091 0.41462458 0.23607984 0.42524079 0.179583313 FALSE 0.5 0.179583313 FALSE 0.133468760 0.5886542 0.17861624 0.4007598 322710 11331 2255663 2255664 1 -3 Same + + 43.7956331 67.632345319 0 2.514106e+02 3.0 1.556799 2.067721 0.7106577 1330 Exonuclease V gamma subunit [DNA replication, recombination, and repair] L Exodeoxyribonuclease V, RecC subunit 1.500531 1.994864 0.6715355 1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] L Exodeoxyribonuclease V, beta subunit L TRUE TRUE 20 TRUE 4.2855480437 3.3390560 2.8267717 0.8039394 3.5818860 Y 2.4007771 0.9939192 6.87500000 0.86429110 0.99331179 0.86932250 0.998943879 TRUE 0.5 0.998943879 TRUE 0.982660112 0.9939192 0.89897219 0.9870780 322710 11331 2255664 2255665 1 -75 Same + + 41.0018829 160.174630807 0 2.881776e+02 3.0 1.500531 1.994864 0.6715355 1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] L Exodeoxyribonuclease V, beta subunit 1.722149 2.334309 0.8129136 507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] L Exodeoxyribonuclease V, alpha subunit L TRUE TRUE 21 TRUE 4.2155967128 3.4539189 3.6174186 0.8039394 3.5818860 Y 2.4007771 0.9958832 1.63068182 0.57349513 0.99548092 0.58412006 0.996635290 TRUE 0.5 0.996635290 TRUE 0.925429912 0.9958832 0.90224249 0.9912321 322710 11331 2255665 2255666 1 264 Same + + 0.0000000 -2.400671863 0 -4.377657e+00 318.5 1.722149 2.334309 0.8129136 507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] L Exodeoxyribonuclease V, alpha subunit 3.189497 4.152312 1.0248180 2852 Uncharacterized protein conserved in bacteria [Function unknown] S Protein of unknown function DUF559 TRUE TRUE 22 TRUE 0.3922770566 0.2248082 0.2233716 0.8039394 0.9001864 U 0.5877867 0.5740153 35.96590909 0.08106510 0.18871833 0.08437170 0.020108042 FALSE 0.5 0.020108042 FALSE 0.015421428 0.5740153 0.15078045 0.3864042 322710 11331 2255666 2255667 1 -3 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 3.189497 4.152312 1.0248180 2852 Uncharacterized protein conserved in bacteria [Function unknown] S Protein of unknown function DUF559 4.160548 5.547347 1.0921853 - - - hypothetical protein TRUE TRUE 23 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.5921955 U 0.5877867 0.5611155 6.87500000 0.86429110 0.14493487 0.86932250 0.519116746 TRUE 0.5 0.519116746 TRUE 0.478977457 0.5611155 0.12613896 0.3740187 322710 11331 2255668 2255669 1 -1848 Same - - 0.0000000 0.000000000 0 0.000000e+00 318.5 3.891458 5.222922 1.1063017 840 Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] NT Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer 1.439461 1.891057 0.6449914 2200 FOG: EAL domain [Signal transduction mechanisms] T GGDEF T FALSE TRUE 23 TRUE 0.3922770566 0.2738171 0.3137226 0.8039394 0.9001864 Y 2.4007771 0.7582838 0.04545455 0.33287188 0.65152221 0.34262004 0.482635129 FALSE 0.5 0.482635129 FALSE 0.325438902 0.7582838 0.49158502 0.5944972 322710 11331 2255671 2255672 1 175 Same - - 0.0000000 0.009936207 0 9.936207e-03 NA 2.097079 2.781859 0.8970754 1879 ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism] G similar to ABC-type sugar transport system periplasmic component 1.610960 2.209506 0.8072952 583 Transcriptional regulator [Transcription] K regulatory protein, LysR:LysR substrate binding domain - FALSE TRUE 22 TRUE 0.3922770566 0.5517639 0.6393682 0.80