Taxon Scaffold Gene1 Gene2 Consecutive Sep Code Strand1 Strand2 GNScore GNWithin GNAll GNMinus GOScore CAI CAI.Alm CBI COG COGanno COGfun Description nCAI nCAI.Alm nCBI nCOG nCOGanno nCOGfun nDescription COGsim forward forwardplus sumBias same bbfGNScore bbfGNMinus bbfGNWithin bbfGNAll bbfGOScore COGsimClass cfCOG pSame groupIndexD pSameD pOpLogistic pOpDistance pOp1 bOp1 pCAI pOp bOp pOp2 pSame pOpLogisticLike pOpLogisticM 334802 18387 2411280 2411281 1 5 Same + + 0.0000000 5.640647e-02 0 5.640647e-02 NA 1.725650 2.200336 0.9429746 - - - hypothetical protein 1.491859 1.996111 0.7511394 177 Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] L COG0177: Predicted EndoIII-related endonuclease FALSE FALSE 1 TRUE 0.4763389 0.5416146 0.85772022 0.8692997 0.6561433 U 0.6970199 0.6380621 7.08750 0.853223210 0.24291657 0.820794169 6.509807e-01 TRUE 0.5 6.509807e-01 TRUE 5.970393e-01 0.6380621 0.20311075 0.3679232 334802 18387 2411283 2411284 1 563 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 NA 1.747949 2.297338 0.8574048 - - - hypothetical protein 2.355260 3.146811 0.8981150 3464 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG3464: Transposase and inactivated derivatives FALSE FALSE 2 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.6561433 U 0.6970199 0.5957476 37.31250 0.009933047 0.09434480 0.007842874 1.044045e-03 FALSE 0.5 1.044045e-03 FALSE 1.255470e-03 0.5957476 0.11134422 0.3273221 334802 18387 2411285 2411286 1 41 Same - - 0.0000000 7.211149e+00 0 7.211149e+00 12.0 1.361626 1.791353 0.7818317 2863 Cytochrome c553 [Energy production and conversion] C COG2863: Cytochrome c553 1.609031 2.074310 0.8863251 2863 Cytochrome c553 [Energy production and conversion] C COG2863: Cytochrome c553 C TRUE FALSE 2 TRUE 0.4763389 1.3616863 2.05393193 0.8692997 3.0319821 Y 2.5176965 0.9638378 13.35000 0.805032182 0.94992466 0.764889702 9.873941e-01 TRUE 0.5 9.873941e-01 TRUE 9.572544e-01 0.9638378 0.84432360 0.8979644 334802 18387 2411287 2411288 1 213 Same + + 38.0061268 -2.464019e+00 0 1.337828e+02 NA 1.352168 1.840531 0.6868088 714 MoxR-like ATPases [General function prediction only] R COG0714: MoxR-like ATPases 1.390399 1.860971 0.6761694 3825 Uncharacterized protein conserved in bacteria [Function unknown] S COG3825: Uncharacterized protein conserved in bacteria FALSE FALSE 2 TRUE 3.1076274 2.5262025 0.37397510 0.8692997 0.6561433 U 0.6970199 0.8036505 29.55000 0.323064412 0.67391180 0.273269888 4.965518e-01 FALSE 0.5 4.965518e-01 FALSE 3.615715e-01 0.8036505 0.54268945 0.5747283 334802 18387 2411288 2411289 1 84 Same + + 0.0000000 -2.493002e+00 0 -7.048711e+00 NA 1.390399 1.860971 0.6761694 3825 Uncharacterized protein conserved in bacteria [Function unknown] S COG3825: Uncharacterized protein conserved in bacteria 1.429103 1.948168 0.7109598 3135 Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Q COG3135: Uncharacterized protein involved in benzoate metabolism FALSE FALSE 3 TRUE 0.4763389 0.3020553 0.37182238 0.8692997 0.6561433 U 0.6970199 0.5545481 19.16250 0.559647009 0.01756506 0.500339681 2.221780e-02 FALSE 0.5 2.221780e-02 FALSE 2.740739e-02 0.5545481 0.02169197 0.2913090 334802 18387 2411289 2411290 1 402 Same + + 0.0000000 -8.376243e+01 0 -1.208092e+01 342.7 1.429103 1.948168 0.7109598 3135 Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Q COG3135: Uncharacterized protein involved in benzoate metabolism 1.449709 1.936175 0.7024901 176 Transaldolase [Carbohydrate transport and metabolism] G COG0176: Transaldolase - FALSE FALSE 4 TRUE 0.4763389 0.2940740 0.06746264 0.8692997 0.8936492 N 0.6844676 0.5206886 34.93750 0.029395488 0.01756506 0.023306314 5.411891e-04 FALSE 0.5 5.411891e-04 FALSE 6.710738e-04 0.5206886 0.02169197 0.2639968 334802 18387 2411290 2411291 1 366 Same + + 0.0000000 -8.698189e+01 0 -6.890225e+00 NA 1.449709 1.936175 0.7024901 176 Transaldolase [Carbohydrate transport and metabolism] G COG0176: Transaldolase 1.624865 2.100808 0.7913085 2764 Uncharacterized protein conserved in bacteria [Function unknown] S COG2764: Uncharacterized protein conserved in bacteria FALSE FALSE 5 TRUE 0.4763389 0.3024669 0.05249249 0.8692997 0.6561433 U 0.6970199 0.4942533 34.16250 0.042493535 0.01756506 0.033785590 7.928343e-04 FALSE 0.5 7.928343e-04 FALSE 9.830542e-04 0.4942533 0.02169197 0.2439606 334802 18387 2411292 2411293 1 -3 Same - - 4.1431347 2.799316e+00 0 6.942450e+00 NA 1.415241 1.918704 0.6632624 591 Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] ER COG0591: Na+/proline symporter 2.221120 2.974659 1.0123087 - - - hypothetical protein TRUE FALSE 5 TRUE 1.4495372 1.3525935 1.66525952 0.8692997 0.6561433 U 0.6970199 0.8347370 3.53125 0.841536177 0.73575997 0.807108744 9.366568e-01 TRUE 0.5 9.366568e-01 TRUE 8.897767e-01 0.8347370 0.60318638 0.6251531 334802 18387 2411293 2411294 1 192 Same - - 0.0000000 -1.887144e+00 0 2.799316e+00 NA 2.221120 2.974659 1.0123087 - - - hypothetical protein 1.564247 2.086569 0.7404064 421 Spermidine synthase [Amino acid transport and metabolism] E COG0421: Spermidine synthase TRUE FALSE 4 TRUE 0.4763389 1.1366200 0.39518108 0.8692997 0.6561433 U 0.6970199 0.5413662 28.54375 0.432457217 0.01756506 0.375145800 1.344044e-02 FALSE 0.5 1.344044e-02 FALSE 1.661467e-02 0.5413662 0.02169197 0.2804449 334802 18387 2411294 2411295 1 251 Same - - 0.0000000 -1.128017e+01 0 -6.185741e+00 NA 1.564247 2.086569 0.7404064 421 Spermidine synthase [Amino acid transport and metabolism] E COG0421: Spermidine synthase 1.764831 2.362992 0.8471485 3663 G:T/U mismatch-specific DNA glycosylase [DNA replication, recombination, and repair] L COG3663: G:T/U mismatch-specific DNA glycosylase - TRUE FALSE 3 TRUE 0.4763389 0.3040291 0.25570435 0.8692997 0.6561433 N 0.6844676 0.5311646 30.91250 0.199093136 0.01756506 0.163783407 4.424805e-03 FALSE 0.5 4.424805e-03 FALSE 5.481640e-03 0.5311646 0.02169197 0.2722416 334802 18387 2411295 2411296 1 0 Same - - 0.0000000 -9.062422e-01 0 -2.353161e+00 NA 1.764831 2.362992 0.8471485 3663 G:T/U mismatch-specific DNA glycosylase [DNA replication, recombination, and repair] L COG3663: G:T/U mismatch-specific DNA glycosylase 1.430683 2.001744 0.8066818 3161 4-hydroxybenzoate synthetase (chorismate lyase) [Coenzyme metabolism] H COG3161: 4-hydroxybenzoate synthetase (chorismate lyase) - TRUE FALSE 2 TRUE 0.4763389 0.3277437 0.43904305 0.8692997 0.6561433 N 0.6844676 0.5650677 5.86250 0.852170963 0.01756506 0.819558604 9.343541e-02 FALSE 0.5 9.343541e-02 FALSE 2.075292e-01 0.5650677 0.04345449 0.3002003 334802 18387 2411296 2411297 1 0 Same - - 0.0000000 -7.438000e+00 0 -1.603603e+01 NA 1.430683 2.001744 0.8066818 3161 4-hydroxybenzoate synthetase (chorismate lyase) [Coenzyme metabolism] H COG3161: 4-hydroxybenzoate synthetase (chorismate lyase) 1.330735 1.795794 0.6191402 326 Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] O COG0326: Molecular chaperone, HSP90 family - TRUE FALSE 1 TRUE 0.4763389 0.2915956 0.28714674 0.8692997 0.6561433 N 0.6844676 0.5373569 5.86250 0.852170963 0.01756506 0.819558604 9.343541e-02 FALSE 0.5 9.343541e-02 FALSE 1.133318e-01 0.5373569 0.02169197 0.2772001 334802 18387 2411297 2411298 1 151 Same - - 0.0000000 -1.852597e+00 0 -4.824917e-01 342.7 1.330735 1.795794 0.6191402 326 Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] O COG0326: Molecular chaperone, HSP90 family 1.468007 2.002333 0.6947221 1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism] KE COG1167: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - TRUE FALSE 0 TRUE 0.4763389 0.3666017 0.39895702 0.8692997 0.8936492 N 0.6844676 0.5812421 26.39375 0.517133102 0.03843536 0.457648819 4.105092e-02 FALSE 0.5 4.105092e-02 FALSE 8.454758e-02 0.5812421 0.07939006 0.3142714 334802 18387 2411299 2411300 1 125 Same + + 0.0000000 -2.191787e+00 0 -2.767151e+00 NA 1.552309 2.128872 0.7745883 - - - hypothetical protein 1.379267 1.930158 0.7415838 - - - COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily FALSE FALSE 0 TRUE 0.4763389 0.3235786 0.38352199 0.8692997 0.6561433 U 0.6970199 0.5562859 24.24375 0.494710029 0.01756506 0.435478871 1.720360e-02 FALSE 0.5 1.720360e-02 FALSE 2.332046e-02 0.5562859 0.02380732 0.2927641 334802 18387 2411300 2411301 1 40 Same + + 0.0000000 -2.954186e-01 0 4.946509e+00 NA 1.379267 1.930158 0.7415838 - - - COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily 1.377951 1.880287 0.6943363 1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism] KE COG1167: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs FALSE FALSE 1 TRUE 0.4763389 1.2607566 0.47503798 0.8692997 0.6561433 U 0.6970199 0.5537458 13.18750 0.806779021 0.01756506 0.766892057 6.946690e-02 FALSE 0.5 6.946690e-02 FALSE 8.473639e-02 0.5537458 0.02169197 0.2906390 334802 18387 2411301 2411302 1 69 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 342.7 1.377951 1.880287 0.6943363 1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism] KE COG1167: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 2.426263 3.228949 0.9818387 - - - COG2801: Transposase and inactivated derivatives FALSE FALSE 2 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 U 0.6970199 0.6195361 17.35000 0.671182725 0.18036720 0.616606305 3.099565e-01 FALSE 0.5 3.099565e-01 FALSE 2.847350e-01 0.6195361 0.16319661 0.3496633 334802 18387 2411302 2411303 1 96 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 342.7 2.426263 3.228949 0.9818387 - - - COG2801: Transposase and inactivated derivatives 2.772291 3.703599 0.9625385 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG2801: Transposase and inactivated derivatives FALSE FALSE 3 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 U 0.6970199 0.6195361 21.05625 0.476912589 0.18036720 0.418049335 1.671061e-01 FALSE 0.5 1.671061e-01 FALSE 1.509655e-01 0.6195361 0.16319661 0.3496633 334802 18387 2411305 2411306 1 82 Same + + 8.3691571 -2.598434e-01 0 3.085580e+01 342.7 1.483866 1.975814 0.7157667 235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] G COG0235: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 1.535528 2.077124 0.7685705 329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane] EM COG0329: Dihydrodipicolinate synthase/N-acetylneuraminate lyase - FALSE FALSE 4 TRUE 1.9544472 1.9312708 0.47696567 0.8692997 0.8936492 N 0.6844676 0.7365040 18.82500 0.584683134 0.52250204 0.525891178 6.063744e-01 TRUE 0.5 6.063744e-01 TRUE 4.930672e-01 0.7365040 0.40859866 0.4799550 334802 18387 2411306 2411307 1 15 Same + + 0.0000000 1.474090e-01 0 -3.588640e+00 342.7 1.535528 2.077124 0.7685705 329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane] EM COG0329: Dihydrodipicolinate synthase/N-acetylneuraminate lyase 1.839464 2.473615 0.8599160 2258 Uncharacterized protein conserved in bacteria [Function unknown] S COG2258: Uncharacterized protein conserved in bacteria FALSE FALSE 5 TRUE 0.4763389 0.3167346 0.92477231 0.8692997 0.8936492 U 0.6970199 0.6762725 8.95625 0.847706769 0.36110370 0.814324152 7.588070e-01 TRUE 0.5 7.588070e-01 TRUE 6.884459e-01 0.6762725 0.28417135 0.4082015 334802 18387 2411309 2411310 1 202 Same + + 0.0000000 1.960130e-01 0 -3.748646e+00 294.0 1.608088 2.197034 0.8028087 583 Transcriptional regulator [Transcription] K COG0583: Transcriptional regulator 1.663812 2.274939 0.7988710 583 Transcriptional regulator [Transcription] K COG0583: Transcriptional regulator K FALSE FALSE 6 TRUE 0.4763389 0.3154757 1.03112946 0.8692997 0.8469847 Y 2.5176965 0.8427044 29.05625 0.377213111 0.75087704 0.323055547 6.460912e-01 TRUE 0.5 6.460912e-01 TRUE 4.954852e-01 0.8427044 0.61853495 0.6388532 334802 18387 2411312 2411313 1 114 Same + + 0.0000000 2.767233e+00 0 2.767233e+00 NA 1.674866 2.294284 0.7890613 1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] J COG1187: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 1.897814 2.539023 0.9101507 - - - hypothetical protein FALSE FALSE 7 TRUE 0.4763389 1.1081886 1.63218750 0.8692997 0.6561433 U 0.6970199 0.7513405 23.40625 0.460545346 0.55828638 0.402149150 5.190066e-01 TRUE 0.5 5.190066e-01 TRUE 4.001504e-01 0.7513405 0.43863806 0.4994188 334802 18387 2411315 2411316 1 277 Same + + 0.0000000 6.026147e-01 0 3.394155e+00 342.7 1.405869 1.871636 0.6550014 543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] HC COG0543: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 1.283459 1.707752 0.5922164 4992 Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] E COG4992: Ornithine/acetylornithine aminotransferase - FALSE FALSE 8 TRUE 0.4763389 1.1819615 1.21175572 0.8692997 0.8936492 N 0.6844676 0.7057008 31.96250 0.118454450 0.44340288 0.095736685 9.669391e-02 FALSE 0.5 9.669391e-02 FALSE 6.622545e-02 0.7057008 0.34546765 0.4418876 334802 18387 2411316 2411317 1 5 Same + + 0.0000000 8.202445e-01 0 -1.918372e-01 342.7 1.283459 1.707752 0.5922164 4992 Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] E COG4992: Ornithine/acetylornithine aminotransferase 1.396066 1.871190 0.8130132 456 Acetyltransferases [General function prediction only] R COG0456: Acetyltransferases FALSE FALSE 9 TRUE 0.4763389 0.3765387 1.24169415 0.8692997 0.8936492 U 0.6970199 0.7254788 7.08750 0.853223210 0.49496251 0.820794169 8.506817e-01 TRUE 0.5 8.506817e-01 TRUE 7.852395e-01 0.7254788 0.38612201 0.4659787 334802 18387 2411318 2411319 1 297 Same - - 0.0000000 -3.994007e+01 0 -1.840569e-02 NA 1.757337 2.359332 0.8098792 5634 Uncharacterized conserved protein [Function unknown] S COG5634: Uncharacterized conserved protein 1.297640 1.729848 0.6635202 410 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E COG0410: ABC-type branched-chain amino acid transport systems, ATPase component TRUE FALSE 9 TRUE 0.4763389 0.3839902 0.18334423 0.8692997 0.6561433 U 0.6970199 0.5173070 32.60000 0.086437216 0.01756506 0.069376626 1.688784e-03 FALSE 0.5 1.688784e-03 FALSE 2.093513e-03 0.5173070 0.02169197 0.2613731 334802 18387 2411319 2411320 1 0 Same - - 86.7994917 2.435182e+01 0 3.643753e+02 342.7 1.297640 1.729848 0.6635202 410 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E COG0410: ABC-type branched-chain amino acid transport systems, ATPase component 1.551000 2.081682 0.7728068 411 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E COG0411: ABC-type branched-chain amino acid transport systems, ATPase component E TRUE FALSE 8 TRUE 3.5119523 3.1378408 2.76269473 0.8692997 0.8936492 Y 2.5176965 0.9873810 5.86250 0.852170963 0.98294255 0.819558604 9.969987e-01 TRUE 0.5 9.969987e-01 TRUE 9.782984e-01 0.9873810 0.88662275 0.9627359 334802 18387 2411320 2411321 1 63 Same - - 75.1213501 2.435182e+01 0 3.093418e+02 342.7 1.551000 2.081682 0.7728068 411 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E COG0411: ABC-type branched-chain amino acid transport systems, ATPase component 1.304448 1.770190 0.6314371 4177 ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism] E COG4177: ABC-type branched-chain amino acid transport system, permease component E TRUE FALSE 7 TRUE 3.4505218 3.0434871 2.76269473 0.8692997 0.8936492 Y 2.5176965 0.9870766 16.51250 0.714093337 0.98252572 0.663063753 9.929296e-01 TRUE 0.5 9.929296e-01 TRUE 9.510445e-01 0.9870766 0.88607905 0.9618601 334802 18387 2411321 2411322 1 -19 Same - - 72.6922023 2.405675e+01 0 3.536765e+02 259.0 1.304448 1.770190 0.6314371 4177 ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism] E COG4177: ABC-type branched-chain amino acid transport system, permease component 1.503068 2.031597 0.7432166 559 Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism] E COG0559: Branched-chain amino acid ABC-type transport system, permease components E TRUE FALSE 6 TRUE 3.4372508 3.1254424 2.70867164 0.8692997 1.4329445 Y 2.5176965 0.9890939 0.53125 0.802393502 0.98528350 0.761868442 9.963351e-01 TRUE 0.5 9.963351e-01 TRUE 9.703676e-01 0.9890939 0.88968093 0.9676848 334802 18387 2411323 2411324 1 96 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 342.7 2.426263 3.228949 0.9818387 - - - COG2801: Transposase and inactivated derivatives 2.772291 3.703599 0.9625385 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG2801: Transposase and inactivated derivatives FALSE FALSE 6 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 U 0.6970199 0.6195361 21.05625 0.476912589 0.18036720 0.418049335 1.671061e-01 FALSE 0.5 1.671061e-01 FALSE 1.509655e-01 0.6195361 0.16319661 0.3496633 334802 18387 2411325 2411326 1 1098 Same - - 0.0000000 -4.215246e+01 0 -4.215246e+01 NA 1.840038 2.518263 0.8336418 1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] MG COG1086: Predicted nucleoside-diphosphate sugar epimerases 1.963068 2.741782 1.0819450 - - - COG0451: Nucleoside-diphosphate-sugar epimerases TRUE FALSE 6 TRUE 0.4763389 0.2914702 0.18118414 0.8692997 0.6561433 U 0.6970199 0.5188613 39.72500 0.003605521 0.01756506 0.002843002 6.469257e-05 FALSE 0.5 6.469257e-05 FALSE 8.022789e-05 0.5188613 0.02169197 0.2625768 334802 18387 2411326 2411327 1 3566 Same - - 0.0000000 -1.981627e+01 0 -1.981627e+01 NA 1.963068 2.741782 1.0819450 - - - COG0451: Nucleoside-diphosphate-sugar epimerases 2.902076 3.900259 0.9839530 - - - COG0463: Glycosyltransferases involved in cell wall biogenesis TRUE FALSE 5 TRUE 0.4763389 0.2907552 0.21972653 0.8692997 0.6561433 U 0.6970199 0.5261642 40.36250 0.002797988 0.01756506 0.002205873 5.016336e-05 FALSE 0.5 5.016336e-05 FALSE 6.220984e-05 0.5261642 0.02169197 0.2682839 334802 18387 2411327 2411328 1 4 Same - - 2.3025851 1.204272e-01 0 6.817461e+00 NA 2.902076 3.900259 0.9839530 - - - COG0463: Glycosyltransferases involved in cell wall biogenesis 3.007491 4.026708 0.9899811 1216 Predicted glycosyltransferases [General function prediction only] R COG1216: Predicted glycosyltransferases TRUE FALSE 4 TRUE 1.0945572 1.3480705 0.90575081 0.8692997 0.6561433 U 0.6970199 0.7023455 6.75625 0.853227737 0.43436781 0.820799486 8.169909e-01 TRUE 0.5 8.169909e-01 TRUE 7.484350e-01 0.7023455 0.33852787 0.4379202 334802 18387 2411328 2411329 1 60 Same - - 2.3025851 1.204272e-01 0 2.187446e+00 NA 3.007491 4.026708 0.9899811 1216 Predicted glycosyltransferases [General function prediction only] R COG1216: Predicted glycosyltransferases 2.872663 3.888591 1.0052361 451 Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] MG COG0451: Nucleoside-diphosphate-sugar epimerases TRUE FALSE 3 TRUE 1.0945572 1.0136399 0.90575081 0.8692997 0.6561433 U 0.6970199 0.7082527 16.16250 0.732033725 0.45021730 0.682783776 6.910799e-01 TRUE 0.5 6.910799e-01 TRUE 5.960819e-01 0.7082527 0.35073743 0.4449278 334802 18387 2411329 2411330 1 2754 Same - - 0.0000000 -8.897460e+01 0 -9.695930e+01 342.7 2.872663 3.888591 1.0052361 451 Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] MG COG0451: Nucleoside-diphosphate-sugar epimerases 3.494865 4.826009 0.9912907 1682 ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] GM COG1682: ABC-type polysaccharide/polyol phosphate export systems, permease component MG TRUE FALSE 2 TRUE 0.4763389 0.2948093 0.04667025 0.8692997 0.8936492 Y 2.5176965 0.7218673 40.33750 0.002826095 0.48575849 0.002228046 2.669980e-03 FALSE 0.5 2.669980e-03 FALSE 1.724712e-03 0.7218673 0.37873054 0.4614874 334802 18387 2411330 2411331 1 108 Same - - 0.0000000 1.127998e-01 0 -3.572039e-01 342.7 3.494865 4.826009 0.9912907 1682 ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane] GM COG1682: ABC-type polysaccharide/polyol phosphate export systems, permease component 2.853105 3.814237 1.0323875 1091 dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] M COG1091: dTDP-4-dehydrorhamnose reductase M TRUE FALSE 1 TRUE 0.4763389 0.3695003 0.89668935 0.8692997 0.8936492 Y 2.5176965 0.8308434 22.79375 0.452555034 0.72826708 0.394431208 6.890101e-01 TRUE 0.5 6.890101e-01 TRUE 5.491093e-01 0.8308434 0.59566271 0.6185781 334802 18387 2411331 2411332 1 779 Same - - 4.0253517 -4.919274e+01 0 9.036309e+00 12.0 2.853105 3.814237 1.0323875 1091 dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] M COG1091: dTDP-4-dehydrorhamnose reductase 1.677442 2.225028 0.7661683 1209 dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] M COG1209: dTDP-glucose pyrophosphorylase M TRUE FALSE 0 TRUE 1.4262838 1.4367505 0.16235286 0.8692997 3.0319821 Y 2.5176965 0.9121565 38.87500 0.005069080 0.87146757 0.003998279 3.339071e-02 FALSE 0.5 3.339071e-02 FALSE 1.503038e-02 0.9121565 0.74969321 0.7741956 334802 18387 2411332 2411333 1 12 Same - - 121.6226988 -5.767008e+00 0 4.504599e+02 12.0 1.677442 2.225028 0.7661683 1209 dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] M COG1209: dTDP-glucose pyrophosphorylase 1.554894 2.079082 0.7473979 1088 dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] M COG1088: dTDP-D-glucose 4,6-dehydratase M TRUE FALSE -1 TRUE 3.6834550 3.2316862 0.30146102 0.8692997 3.0319821 Y 2.5176965 0.9699641 8.33125 0.850409367 0.95867077 0.817491615 9.924737e-01 TRUE 0.5 9.924737e-01 TRUE 9.711183e-01 0.9699641 0.85537863 0.9142577 334802 18387 2411335 2411336 1 15 Same - - 0.0000000 2.211668e+01 0 1.030894e+01 342.7 1.756389 2.438830 0.8445735 204 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] I COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1.414492 1.932905 0.6951055 44 Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism] F COG0044: Dihydroorotase and related cyclic amidohydrolases - TRUE FALSE -2 TRUE 0.4763389 1.4709440 2.59533716 0.8692997 0.8936492 N 0.6844676 0.8697373 8.95625 0.847706769 0.80010384 0.814324152 9.570439e-01 TRUE 0.5 9.570439e-01 TRUE 9.187555e-01 0.8697373 0.67014262 0.6879470 334802 18387 2411336 2411337 1 92 Same - - 111.5488852 2.193692e+01 0 4.304694e+02 342.7 1.414492 1.932905 0.6951055 44 Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism] F COG0044: Dihydroorotase and related cyclic amidohydrolases 1.465567 1.974513 0.7192199 540 Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism] F COG0540: Aspartate carbamoyltransferase, catalytic chain F TRUE FALSE -3 TRUE 3.6257598 3.2127973 2.58956426 0.8692997 0.8936492 Y 2.5176965 0.9863712 20.12500 0.501634897 0.98155878 0.442300382 9.816768e-01 TRUE 0.5 9.816768e-01 TRUE 8.854836e-01 0.9863712 0.88481877 0.9598344 334802 18387 2411337 2411338 1 81 Same - - 33.0865458 2.017868e+01 0 1.235484e+02 342.7 1.465567 1.974513 0.7192199 540 Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism] F COG0540: Aspartate carbamoyltransferase, catalytic chain 1.675677 2.319424 0.8348678 2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism] F COG2065: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase F TRUE FALSE -4 TRUE 3.0085971 2.4884691 2.50266992 0.8692997 0.8936492 Y 2.5176965 0.9811911 18.71875 0.592552207 0.97441519 0.533986341 9.822658e-01 TRUE 0.5 9.822658e-01 TRUE 9.109649e-01 0.9811911 0.87554992 0.9451291 334802 18387 2411338 2411339 1 -13 Same - - 15.0272229 2.030128e+01 0 7.005715e+01 342.7 1.675677 2.319424 0.8348678 2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism] F COG2065: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 1.723963 2.354497 0.8394324 816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair] L COG0816: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) - TRUE FALSE -5 TRUE 2.3849184 2.2441261 2.50890402 0.8692997 0.8936492 N 0.6844676 0.9408465 0.73125 0.806039826 0.91608599 0.766044520 9.784332e-01 TRUE 0.5 9.784332e-01 TRUE 9.441000e-01 0.9408465 0.80253062 0.8400425 334802 18387 2411339 2411340 1 -3 Same - - 31.3763013 2.244878e+01 0 3.183314e+02 NA 1.723963 2.354497 0.8394324 816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair] L COG0816: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 1.585621 2.166594 0.8254749 1678 Putative transcriptional regulator [Transcription] K COG1678: Putative transcriptional regulator - TRUE FALSE -6 TRUE 2.9792558 3.0618199 2.61501621 0.8692997 0.6561433 N 0.6844676 0.9520716 3.53125 0.841536177 0.93281140 0.807108744 9.866184e-01 TRUE 0.5 9.866184e-01 TRUE 9.610774e-01 0.9520716 0.82299588 0.8677068 334802 18387 2411340 2411341 1 206 Same - - 0.0000000 2.468855e+00 0 2.468855e+00 NA 1.585621 2.166594 0.8254749 1678 Putative transcriptional regulator [Transcription] K COG1678: Putative transcriptional regulator 2.045790 2.830447 0.9273614 - - - hypothetical protein TRUE FALSE -7 TRUE 0.4763389 1.0490590 1.57300329 0.8692997 0.6561433 U 0.6970199 0.7438249 29.19375 0.361937655 0.54033781 0.308885493 4.000489e-01 FALSE 0.5 4.000489e-01 FALSE 2.940931e-01 0.7438249 0.42345085 0.4894628 334802 18387 2411343 2411344 1 93 Same - - 117.0328500 2.436763e+01 0 5.887346e+02 15.0 1.496491 2.018110 0.6280501 459 Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] O COG0459: Chaperonin GroEL (HSP60 family) 2.113493 2.837813 0.8853576 234 Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones] O COG0234: Co-chaperonin GroES (HSP10) O TRUE FALSE -8 TRUE 3.6614136 3.3142175 2.80401499 0.8692997 2.9272499 Y 2.5176965 0.9950773 20.23750 0.497468227 0.99339734 0.438193217 9.933306e-01 TRUE 0.5 9.933306e-01 TRUE 8.994305e-01 0.9950773 0.90034287 0.9852385 334802 18387 2411344 2411345 1 590 Same - - 0.0000000 -2.413874e+01 0 -2.203593e-01 NA 2.113493 2.837813 0.8853576 234 Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones] O COG0234: Co-chaperonin GroES (HSP10) 2.022473 2.773558 0.9155301 - - - hypothetical protein TRUE FALSE -9 TRUE 0.4763389 0.3748841 0.21031152 0.8692997 0.6561433 U 0.6970199 0.5226015 37.53125 0.009001818 0.01756506 0.007106193 1.623800e-04 FALSE 0.5 1.623800e-04 FALSE 2.013694e-04 0.5226015 0.02169197 0.2654890 334802 18387 2411345 2411346 1 1211 Same - - 0.0000000 -1.924090e+01 0 -1.924090e+01 NA 2.022473 2.773558 0.9155301 - - - hypothetical protein 2.386681 3.244246 0.9705562 1733 Predicted transcriptional regulators [Transcription] K COG1733: Predicted transcriptional regulators TRUE FALSE -10 TRUE 0.4763389 0.2908084 0.22773361 0.8692997 0.6561433 U 0.6970199 0.5276758 39.91250 0.003346918 0.01756506 0.002638945 6.003724e-05 FALSE 0.5 6.003724e-05 FALSE 7.445470e-05 0.5276758 0.02169197 0.2694760 334802 18387 2411348 2411349 1 644 Same - - 0.0000000 -4.219384e+01 0 1.057326e-01 NA 2.227463 3.038485 0.9648474 - - - hypothetical protein 1.496211 1.979936 0.8049330 - - - COG3468: Type V secretory pathway, adhesin AidA TRUE FALSE -11 TRUE 0.4763389 0.5598447 0.18075374 0.8692997 0.6561433 U 0.6970199 0.5130839 38.02500 0.007237703 0.01756506 0.005711429 1.303301e-04 FALSE 0.5 1.303301e-04 FALSE 1.616251e-04 0.5130839 0.02169197 0.2581221 334802 18387 2411349 2411350 1 263 Same - - 0.0000000 4.339578e-01 0 4.339578e-01 NA 1.496211 1.979936 0.8049330 - - - COG3468: Type V secretory pathway, adhesin AidA 1.690705 2.231010 0.7745615 3047 Outer membrane protein W [Cell envelope biogenesis, outer membrane] M COG3047: Outer membrane protein W TRUE FALSE -12 TRUE 0.4763389 0.7528901 1.18286287 0.8692997 0.6561433 U 0.6970199 0.6889961 31.43125 0.155617966 0.39754922 0.126797980 1.084291e-01 FALSE 0.5 1.084291e-01 FALSE 7.673087e-02 0.6889961 0.31079275 0.4224634 334802 18387 2411350 2411351 1 78 Same - - 0.0000000 2.021412e+00 0 2.021412e+00 NA 1.690705 2.231010 0.7745615 3047 Outer membrane protein W [Cell envelope biogenesis, outer membrane] M COG3047: Outer membrane protein W 1.572002 2.086129 0.7206118 - - - hypothetical protein TRUE FALSE -13 TRUE 0.4763389 0.9859268 1.49983306 0.8692997 0.6561433 U 0.6970199 0.7341643 18.31875 0.620859367 0.51672702 0.563364117 6.364827e-01 TRUE 0.5 6.364827e-01 TRUE 5.259035e-01 0.7341643 0.40383993 0.4769551 334802 18387 2411351 2411352 1 93 Same - - 0.0000000 1.831122e+00 0 1.831122e+00 NA 1.572002 2.086129 0.7206118 - - - hypothetical protein 1.590666 2.076068 0.7054492 - - - hypothetical protein TRUE FALSE -14 TRUE 0.4763389 0.9612516 1.47900543 0.8692997 0.6561433 U 0.6970199 0.7314843 20.23750 0.497468227 0.51006646 0.438193217 5.075355e-01 TRUE 0.5 5.075355e-01 TRUE 3.959569e-01 0.7314843 0.39838161 0.4735415 334802 18387 2411352 2411353 1 702 Same - - 0.0000000 -8.413832e+01 0 2.038562e-01 NA 1.590666 2.076068 0.7054492 - - - hypothetical protein 2.382334 3.303576 0.9669030 1733 Predicted transcriptional regulators [Transcription] K COG1733: Predicted transcriptional regulators TRUE FALSE -15 TRUE 0.4763389 0.6886488 0.06495921 0.8692997 0.6561433 U 0.6970199 0.4884125 38.41875 0.006119895 0.01756506 0.004828196 1.100799e-04 FALSE 0.5 1.100799e-04 FALSE 1.365130e-04 0.4884125 0.02169197 0.2396758 334802 18387 2411354 2411355 1 182 Same + + 0.0000000 2.118244e-01 0 2.118244e-01 NA 1.632598 2.149471 0.7145972 491 Zn-dependent hydrolases, including glyoxylases [General function prediction only] R COG0491: Zn-dependent hydrolases, including glyoxylases 1.764351 2.417718 0.8901808 1396 Predicted transcriptional regulators [Transcription] K COG1396: Predicted transcriptional regulators FALSE FALSE -15 TRUE 0.4763389 0.7220677 1.11518611 0.8692997 0.6561433 U 0.6970199 0.6784719 27.96875 0.484108863 0.36750133 0.425079191 3.528495e-01 FALSE 0.5 3.528495e-01 FALSE 2.759037e-01 0.6784719 0.28878617 0.4106349 334802 18387 2411355 2411356 1 -3 Same + + 4.8362819 3.102286e+00 0 3.321964e+01 342.7 1.764351 2.417718 0.8901808 1396 Predicted transcriptional regulators [Transcription] K COG1396: Predicted transcriptional regulators 1.581546 2.136450 0.8216996 - - - COG0454: Histone acetyltransferase HPA2 and related acetyltransferases FALSE FALSE -14 TRUE 1.5703981 1.9597346 1.71372349 0.8692997 0.8936492 U 0.6970199 0.8541826 3.53125 0.841536177 0.77215937 0.807108744 9.473622e-01 TRUE 0.5 9.473622e-01 TRUE 9.044253e-01 0.8541826 0.64053558 0.6591909 334802 18387 2411356 2411357 1 350 Same + + 0.0000000 -8.429247e+01 0 -1.384046e-01 342.7 1.581546 2.136450 0.8216996 - - - COG0454: Histone acetyltransferase HPA2 and related acetyltransferases 1.514794 2.043804 0.7398225 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E COG1280: Putative threonine efflux protein FALSE FALSE -13 TRUE 0.4763389 0.3790454 0.06373226 0.8692997 0.8936492 U 0.6970199 0.5196961 33.86250 0.049015012 0.01756506 0.039025128 9.206641e-04 FALSE 0.5 9.206641e-04 FALSE 1.141518e-03 0.5196961 0.02169197 0.2632249 334802 18387 2411357 2411358 1 474 Same + + 0.0000000 -8.429247e+01 0 2.025220e-01 342.7 1.514794 2.043804 0.7398225 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E COG1280: Putative threonine efflux protein 1.370604 1.804055 0.6294026 584 Glycerophosphoryl diester phosphodiesterase [Energy production and conversion] C COG0584: Glycerophosphoryl diester phosphodiesterase - FALSE FALSE -12 TRUE 0.4763389 0.6830491 0.06373226 0.8692997 0.8936492 N 0.6844676 0.5117274 36.17500 0.016711516 0.01756506 0.013214013 3.037727e-04 FALSE 0.5 3.037727e-04 FALSE 3.766992e-04 0.5117274 0.02169197 0.2570838 334802 18387 2411358 2411359 1 130 Same + + 0.0000000 -8.774201e-01 0 -5.568167e+00 342.7 1.370604 1.804055 0.6294026 584 Glycerophosphoryl diester phosphodiesterase [Energy production and conversion] C COG0584: Glycerophosphoryl diester phosphodiesterase 1.508763 2.092472 0.7555961 - - - COG0477: Permeases of the major facilitator superfamily FALSE FALSE -11 TRUE 0.4763389 0.3061295 0.44044051 0.8692997 0.8936492 U 0.6970199 0.5915859 24.71250 0.510733299 0.07858454 0.451297144 8.175058e-02 FALSE 0.5 8.175058e-02 FALSE 1.062105e-01 0.5915859 0.10220266 0.3235348 334802 18387 2411359 2411360 1 491 Same + + 3.8712010 -9.688447e+01 0 -1.596741e+01 NA 1.508763 2.092472 0.7555961 - - - COG0477: Permeases of the major facilitator superfamily 1.572932 2.265998 0.8551561 730 Predicted permeases [General function prediction only] R COG0730: Predicted permeases FALSE FALSE -10 TRUE 1.4032811 0.2916315 0.03494117 0.8692997 0.6561433 U 0.6970199 0.6106210 36.45625 0.014686815 0.14891435 0.011608053 2.601270e-03 FALSE 0.5 2.601270e-03 FALSE 2.498074e-03 0.6106210 0.14384382 0.3411495 334802 18387 2411361 2411362 1 624 Same - - 0.0000000 -9.979250e+01 0 -2.082803e+00 342.7 1.352915 1.775104 0.6024819 2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] E COG2939: Carboxypeptidase C (cathepsin A) 1.412652 1.884598 0.6463824 - - - COG1073: Hydrolases of the alpha/beta superfamily TRUE FALSE -10 TRUE 0.4763389 0.3305231 0.03160608 0.8692997 0.8936492 U 0.6970199 0.5146460 37.87500 0.007727376 0.01756506 0.006098475 1.392151e-04 FALSE 0.5 1.392151e-04 FALSE 1.726432e-04 0.5146460 0.02169197 0.2593214 334802 18387 2411362 2411363 1 120 Same - - 0.0000000 1.625040e+00 0 1.401897e+00 NA 1.412652 1.884598 0.6463824 - - - COG1073: Hydrolases of the alpha/beta superfamily 1.288211 1.717910 0.7874933 - - - COG2823: Predicted periplasmic or secreted lipoprotein TRUE FALSE -11 TRUE 0.4763389 0.8815943 1.44036029 0.8692997 0.6561433 U 0.6970199 0.7270382 23.93125 0.481161090 0.49890837 0.422196698 4.800711e-01 FALSE 0.5 4.800711e-01 FALSE 3.715417e-01 0.7270382 0.38930910 0.4679310 334802 18387 2411364 2411365 1 98 Same + + 0.0000000 -2.001044e+00 0 -3.120149e+00 NA 1.570087 2.158178 0.7607676 2358 TRAP-type uncharacterized transport system, periplasmic component [General function prediction only] R COG1879: ABC-type sugar transport system, periplasmic component 1.512334 2.036277 0.7830324 3917 2-hydroxychromene-2-carboxylate isomerase [Secondary metabolites biosynthesis, transport, and catabolism] Q COG3917: 2-hydroxychromene-2-carboxylate isomerase FALSE FALSE -11 TRUE 0.4763389 0.3202998 0.38878023 0.8692997 0.6561433 U 0.6970199 0.5573381 21.73750 0.466798845 0.01756506 0.408209736 1.541130e-02 FALSE 0.5 1.541130e-02 FALSE 2.298268e-02 0.5573381 0.02616643 0.2936477 334802 18387 2411365 2411366 1 74 Same + + 0.0000000 1.335679e-01 0 -3.519400e-01 342.7 1.512334 2.036277 0.7830324 3917 2-hydroxychromene-2-carboxylate isomerase [Secondary metabolites biosynthesis, transport, and catabolism] Q COG3917: 2-hydroxychromene-2-carboxylate isomerase 1.502774 2.051046 0.7705797 583 Transcriptional regulator [Transcription] K COG0583: Transcriptional regulator - FALSE FALSE -10 TRUE 0.4763389 0.3698238 0.91657246 0.8692997 0.8936492 N 0.6844676 0.6725841 17.95000 0.643433058 0.35028087 0.587084341 4.931232e-01 FALSE 0.5 4.931232e-01 FALSE 4.080592e-01 0.6725841 0.27641988 0.4041499 334802 18387 2411367 2411368 1 260 Same - - 6.4614682 1.592630e+00 0 4.073212e+01 342.7 1.526765 2.173911 0.7848439 609 ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism] P COG0609: ABC-type Fe3+-siderophore transport system, permease component 1.629477 2.191836 0.7968994 614 ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism] P COG0614: ABC-type Fe3+-hydroxamate transport system, periplasmic component P TRUE FALSE -10 TRUE 1.7836846 2.0391276 1.43425344 0.8692997 0.8936492 Y 2.5176965 0.9270065 31.34375 0.162557187 0.89490694 0.132653972 6.230585e-01 TRUE 0.5 6.230585e-01 TRUE 4.036550e-01 0.9270065 0.77713786 0.8074446 334802 18387 2411368 2411369 1 33 Same - - 6.7799219 1.592630e+00 0 2.353517e+01 342.7 1.629477 2.191836 0.7968994 614 ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism] P COG0614: ABC-type Fe3+-hydroxamate transport system, periplasmic component 1.405046 1.953555 0.7480606 1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] PH COG1120: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components P TRUE FALSE -11 TRUE 1.8132649 1.8088535 1.43425344 0.8692997 0.8936492 Y 2.5176965 0.9293433 12.17500 0.818474155 0.89852724 0.780344129 9.755652e-01 TRUE 0.5 9.755652e-01 TRUE 9.415914e-01 0.9293433 0.78143787 0.8128364 334802 18387 2411369 2411370 1 48 Same - - 2.3513753 3.911193e-01 0 2.048734e+01 342.7 1.405046 1.953555 0.7480606 1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] PH COG1120: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 1.417404 1.910925 0.6700679 1629 Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism] P COG1629: Outer membrane receptor proteins, mostly Fe transport P TRUE FALSE -12 TRUE 1.1178121 1.7316556 1.17476395 0.8692997 0.8936492 Y 2.5176965 0.8831335 14.43125 0.790344008 0.82338145 0.748123538 9.461617e-01 TRUE 0.5 9.461617e-01 TRUE 8.959239e-01 0.8831335 0.69545187 0.7138884 334802 18387 2411370 2411371 1 665 Same - - 0.0000000 -8.611778e+01 0 -5.834155e+00 NA 1.417404 1.910925 0.6700679 1629 Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism] P COG1629: Outer membrane receptor proteins, mostly Fe transport 1.630706 2.121640 0.8583924 4460 Uncharacterized protein conserved in bacteria [Function unknown] S COG4460: Uncharacterized protein conserved in bacteria TRUE FALSE -13 TRUE 0.4763389 0.3048819 0.05464137 0.8692997 0.6561433 U 0.6970199 0.4946091 38.13750 0.006895014 0.01756506 0.005440609 1.241172e-04 FALSE 0.5 1.241172e-04 FALSE 1.539205e-04 0.4946091 0.02169197 0.2442232 334802 18387 2411371 2411372 1 185 Same - - 0.0000000 1.945538e-01 0 1.945538e-01 NA 1.630706 2.121640 0.8583924 4460 Uncharacterized protein conserved in bacteria [Function unknown] S COG4460: Uncharacterized protein conserved in bacteria 1.513885 2.076148 0.7700621 725 ABC-type molybdate transport system, periplasmic component [Inorganic ion transport and metabolism] P COG0725: ABC-type molybdate transport system, periplasmic component TRUE FALSE -14 TRUE 0.4763389 0.6727306 1.02676964 0.8692997 0.6561433 U 0.6970199 0.6646177 28.15625 0.469056836 0.32649511 0.410402456 2.998502e-01 FALSE 0.5 2.998502e-01 FALSE 2.365206e-01 0.6646177 0.25962479 0.3955221 334802 18387 2411372 2411373 1 383 Same - - 0.0000000 -8.529210e+01 0 -2.772154e+00 342.7 1.513885 2.076148 0.7700621 725 ABC-type molybdate transport system, periplasmic component [Inorganic ion transport and metabolism] P COG0725: ABC-type molybdate transport system, periplasmic component 1.485545 1.993168 0.6851811 4631 Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism] F COG4631: Xanthine dehydrogenase, molybdopterin-binding subunit B - TRUE FALSE -15 TRUE 0.4763389 0.3233792 0.05770137 0.8692997 0.8936492 N 0.6844676 0.5182203 34.55000 0.035308067 0.01756506 0.028029492 6.539536e-04 FALSE 0.5 6.539536e-04 FALSE 8.108797e-04 0.5182203 0.02169197 0.2620799 334802 18387 2411373 2411374 1 29 Same - - 29.6843064 1.882311e+01 0 1.794105e+02 3.0 1.485545 1.993168 0.6851811 4631 Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism] F COG4631: Xanthine dehydrogenase, molybdopterin-binding subunit B 1.357835 1.828306 0.6482010 4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism] F COG4630: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A F TRUE FALSE -16 TRUE 2.9259035 2.6735918 2.43076175 0.8692997 3.3522898 Y 2.5176965 0.9924157 11.60000 0.825872060 0.98980009 0.788895183 9.978320e-01 TRUE 0.5 9.978320e-01 TRUE 9.760128e-01 0.9924157 0.89560398 0.9773782 334802 18387 2411379 2411380 1 53 Same + + 0.0000000 2.090018e+00 0 2.090018e+00 342.7 1.686455 2.310923 0.8265523 583 Transcriptional regulator [Transcription] K COG0583: Transcriptional regulator 1.475418 2.020693 0.7484155 1052 Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] CHR COG1052: Lactate dehydrogenase and related dehydrogenases - FALSE FALSE -16 TRUE 0.4763389 0.9979863 1.51116086 0.8692997 0.8936492 N 0.6844676 0.7534588 15.09375 0.775230213 0.56328063 0.731002042 8.164638e-01 TRUE 0.5 8.164638e-01 TRUE 7.327684e-01 0.7534588 0.44290776 0.5022615 334802 18387 2411380 2411381 1 428 Same + + 1.3862944 -6.945924e+01 0 -8.642464e+00 342.7 1.475418 2.020693 0.7484155 1052 Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] CHR COG1052: Lactate dehydrogenase and related dehydrogenases 1.534659 2.094030 0.8176949 778 Nitroreductase [Energy production and conversion] C COG0778: Nitroreductase C FALSE FALSE -15 TRUE 0.7965372 0.2990214 0.12215989 0.8692997 0.8936492 Y 2.5176965 0.7646303 35.42500 0.023516849 0.58916108 0.018622051 3.338344e-02 FALSE 0.5 3.338344e-02 FALSE 2.053090e-02 0.7646303 0.46534580 0.5175267 334802 18387 2411381 2411382 1 182 Same + + 0.0000000 -1.071911e+00 0 -7.896426e-01 342.7 1.534659 2.094030 0.8176949 778 Nitroreductase [Energy production and conversion] C COG0778: Nitroreductase 1.351595 1.871029 0.6694890 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G COG2814: Arabinose efflux permease - FALSE FALSE -14 TRUE 0.4763389 0.3575032 0.43116162 0.8692997 0.8936492 N 0.6844676 0.5873583 27.96875 0.484108863 0.06234597 0.425079191 5.873063e-02 FALSE 0.5 5.873063e-02 FALSE 8.767352e-02 0.5873583 0.09289470 0.3197232 334802 18387 2411382 2411383 1 295 Same + + 0.0000000 -7.598283e+00 0 1.542870e+00 231.0 1.351595 1.871029 0.6694890 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G COG2814: Arabinose efflux permease 1.541065 2.160548 0.7609754 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G COG0477: Permeases of the major facilitator superfamily G FALSE FALSE -13 TRUE 0.4763389 0.9146675 0.28308447 0.8692997 1.6621857 Y 2.5176965 0.8026893 32.50625 0.090291856 0.67192305 0.072530858 1.689368e-01 FALSE 0.5 1.689368e-01 FALSE 1.046587e-01 0.8026893 0.54080314 0.5732415 334802 18387 2411384 2411385 1 -3 Same - - 19.5817494 9.769790e+00 0 1.009870e+02 342.7 1.400171 1.862294 0.6468879 179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Q COG0179: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 1.426526 1.868486 0.6547398 3508 Homogentisate 1,2-dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q COG3508: Homogentisate 1,2-dioxygenase Q TRUE FALSE -13 TRUE 2.6086856 2.4054989 2.16358422 0.8692997 0.8936492 Y 2.5176965 0.9705488 3.53125 0.841536177 0.95949978 0.807108744 9.921145e-01 TRUE 0.5 9.921145e-01 TRUE 9.693998e-01 0.9705488 0.85643202 0.9158329 334802 18387 2411385 2411386 1 25 Same - - 1.5260563 2.260243e+00 0 5.290614e-01 342.7 1.426526 1.868486 0.6547398 3508 Homogentisate 1,2-dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q COG3508: Homogentisate 1,2-dioxygenase 1.536262 2.105296 0.7333061 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G COG0477: Permeases of the major facilitator superfamily - TRUE FALSE -14 TRUE 0.8202908 0.7650616 1.54037396 0.8692997 0.8936492 N 0.6844676 0.7923507 10.98750 0.833240932 0.65022749 0.797445080 9.028072e-01 TRUE 0.5 9.028072e-01 TRUE 8.443078e-01 0.7923507 0.52045441 0.5575079 334802 18387 2411386 2411387 1 -3 Same - - 0.0000000 1.541397e+00 0 1.541397e+00 NA 1.536262 2.105296 0.7333061 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G COG0477: Permeases of the major facilitator superfamily 1.359813 1.923271 0.9293228 - - - hypothetical protein TRUE FALSE -15 TRUE 0.4763389 0.9130276 1.41925849 0.8692997 0.6561433 U 0.6970199 0.7233186 3.53125 0.841536177 0.48946811 0.807108744 8.358363e-01 TRUE 0.5 8.358363e-01 TRUE 7.662711e-01 0.7233186 0.38170246 0.4632871 334802 18387 2411387 2411388 1 43 Same - - 5.7300998 8.962270e+00 0 4.684014e+01 NA 1.359813 1.923271 0.9293228 - - - hypothetical protein 1.381732 1.860665 0.6405024 654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] HC COG0654: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases TRUE FALSE -16 TRUE 1.7132531 2.1064568 2.13354710 0.8692997 0.6561433 U 0.6970199 0.8857949 13.62500 0.801942109 0.82792214 0.761352011 9.511747e-01 TRUE 0.5 9.511747e-01 TRUE 9.044747e-01 0.8857949 0.70045934 0.7191784 334802 18387 2411388 2411389 1 20 Same - - 7.3395377 1.292158e+01 0 5.616675e+01 342.7 1.381732 1.860665 0.6405024 654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] HC COG0654: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 1.377863 1.851897 0.6822631 491 Zn-dependent hydrolases, including glyoxylases [General function prediction only] R COG0491: Zn-dependent hydrolases, including glyoxylases TRUE FALSE -17 TRUE 1.8614186 2.1656284 2.24559910 0.8692997 0.8936492 U 0.6970199 0.9093527 9.96250 0.842239624 0.86695603 0.807930139 9.720583e-01 TRUE 0.5 9.720583e-01 TRUE 9.395972e-01 0.9093527 0.74448807 0.7681077 334802 18387 2411391 2411392 1 501 Same - - 0.0000000 -8.499856e+01 0 -1.848441e+00 342.7 1.810181 2.373384 0.8358656 3791 Uncharacterized conserved protein [Function unknown] S COG3791: Uncharacterized conserved protein 1.636426 2.236830 0.8007039 1414 Transcriptional regulator [Transcription] K COG1414: Transcriptional regulator TRUE FALSE -18 TRUE 0.4763389 0.3340446 0.05841391 0.8692997 0.8936492 U 0.6970199 0.5196446 36.64375 0.013475361 0.01756506 0.010647809 2.441587e-04 FALSE 0.5 2.441587e-04 FALSE 3.027781e-04 0.5196446 0.02169197 0.2631848 334802 18387 2411395 2411396 1 124 Same + + 4.6249728 1.016527e+01 0 1.315804e+02 NA 1.819707 2.476372 0.9245737 4575 Uncharacterized conserved protein [Function unknown] S COG4575: Uncharacterized conserved protein 1.709351 2.443595 0.9396494 5393 Predicted membrane protein [Function unknown] S COG5393: Predicted membrane protein FALSE FALSE -18 TRUE 1.5264435 2.5171817 2.17399698 0.8692997 0.6561433 U 0.6970199 0.8750578 24.18750 0.492344035 0.80943419 0.433153318 8.046653e-01 TRUE 0.5 8.046653e-01 TRUE 6.735170e-01 0.8750578 0.68021538 0.6981153 334802 18387 2411396 2411397 1 104 Same + + 0.0000000 6.600513e+00 0 6.600513e+00 NA 1.709351 2.443595 0.9396494 5393 Predicted membrane protein [Function unknown] S COG5393: Predicted membrane protein 1.972154 2.743548 0.9952161 - - - hypothetical protein FALSE FALSE -17 TRUE 0.4763389 1.3357120 2.01976066 0.8692997 0.6561433 U 0.6970199 0.7990194 22.46250 0.457485900 0.66428599 0.399190570 6.252717e-01 TRUE 0.5 6.252717e-01 TRUE 4.910272e-01 0.7990194 0.53359251 0.5676028 334802 18387 2411398 2411399 1 71 Same - - 0.0000000 1.176520e+00 0 1.176520e+00 NA 2.409151 3.291741 1.0022483 4968 Tfp pilus assembly protein PilE [Cell motility and secretion / Intracellular trafficking and secretion] NU COG4968: Tfp pilus assembly protein PilE 2.574130 3.473097 1.0399605 - - - COG4726: Tfp pilus assembly protein PilX TRUE FALSE -17 TRUE 0.4763389 0.8375381 1.31106418 0.8692997 0.6561433 U 0.6970199 0.7079398 17.63125 0.658775283 0.44938427 0.603356505 6.117519e-01 TRUE 0.5 6.117519e-01 TRUE 5.097999e-01 0.7079398 0.35009157 0.4445539 334802 18387 2411399 2411400 1 93 Same - - 0.0000000 1.167218e+00 0 1.167218e+00 NA 2.574130 3.473097 1.0399605 - - - COG4726: Tfp pilus assembly protein PilX 2.641050 3.617441 0.9961298 4966 Tfp pilus assembly protein PilW [Cell motility and secretion / Intracellular trafficking and secretion] NU hypothetical protein TRUE FALSE -18 TRUE 0.4763389 0.8362741 1.30797575 0.8692997 0.6561433 U 0.6970199 0.7074778 20.23750 0.497468227 0.44815322 0.438193217 4.456500e-01 FALSE 0.5 4.456500e-01 FALSE 3.468402e-01 0.7074778 0.34913796 0.4440025 334802 18387 2411400 2411401 1 1150 Same - - 0.0000000 -1.064481e+02 0 -9.728473e+01 NA 2.641050 3.617441 0.9961298 4966 Tfp pilus assembly protein PilW [Cell motility and secretion / Intracellular trafficking and secretion] NU hypothetical protein 1.829933 2.471439 0.9075445 1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription] K COG1327: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - TRUE FALSE -19 TRUE 0.4763389 0.2948988 0.02783129 0.8692997 0.6561433 N 0.6844676 0.4882255 39.85000 0.003430986 0.01756506 0.002705278 6.155037e-05 FALSE 0.5 6.155037e-05 FALSE 7.633117e-05 0.4882255 0.02169197 0.2395395 334802 18387 2411401 2411402 1 7 Same - - 31.8532736 2.396216e+01 0 9.157019e+01 NA 1.829933 2.471439 0.9075445 1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription] K COG1327: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 1.327124 1.754248 0.6120430 112 Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism] E COG0112: Glycine/serine hydroxymethyltransferase - TRUE FALSE -20 TRUE 2.9816944 2.3622136 2.69687126 0.8692997 0.6561433 N 0.6844676 0.9573728 7.58125 0.852588820 0.94057380 0.820049177 9.891942e-01 TRUE 0.5 9.891942e-01 TRUE 9.664102e-01 0.9573728 0.83262065 0.8811747 334802 18387 2411403 2411404 1 106 Same + + 0.0000000 2.244555e+00 0 -1.607558e+01 342.7 1.432518 1.934110 0.7172458 4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] R COG4221: Short-chain alcohol dehydrogenase of unknown specificity 2.382300 3.137096 0.9172838 824 Predicted thioesterase [General function prediction only] R COG0824: Predicted thioesterase TRUE TRUE -20 TRUE 0.4763389 0.2915779 1.53611629 0.8692997 0.8936492 U 0.6970199 0.7689094 22.63750 0.454859840 0.59887508 0.396654478 5.547117e-01 TRUE 0.5 5.547117e-01 TRUE 4.290993e-01 0.7689094 0.47390538 0.5234987 334802 18387 2411404 2411405 1 177 Same + + 28.9952829 2.059381e+01 0 3.028710e+02 342.7 2.382300 3.137096 0.9172838 824 Predicted thioesterase [General function prediction only] R COG0824: Predicted thioesterase 1.705070 2.299680 0.8378090 811 Biopolymer transport proteins [Intracellular trafficking and secretion] U COG0811: Biopolymer transport proteins TRUE TRUE -19 TRUE 2.9018406 3.0272441 2.52310419 0.8692997 0.8936492 U 0.6970199 0.9520088 27.73750 0.499643568 0.93271882 0.440336479 9.326293e-01 TRUE 0.5 9.326293e-01 TRUE 8.226737e-01 0.9520088 0.82288158 0.8675487 334802 18387 2411405 2411406 1 65 Same + + 31.0240807 2.436763e+01 0 1.685520e+02 316.0 1.705070 2.299680 0.8378090 811 Biopolymer transport proteins [Intracellular trafficking and secretion] U COG0811: Biopolymer transport proteins 1.518263 2.072430 0.8632923 848 Biopolymer transport protein [Intracellular trafficking and secretion] U COG0848: Biopolymer transport protein U TRUE TRUE -18 TRUE 2.9670803 2.6455237 2.80401499 0.8692997 0.7296035 Y 2.5176965 0.9833541 16.74375 0.701912135 0.97740726 0.649774713 9.902790e-01 TRUE 0.5 9.902790e-01 TRUE 9.449765e-01 0.9833541 0.87942319 0.9512331 334802 18387 2411406 2411407 1 -3 Same + + 14.7759085 2.273572e+01 0 7.555352e+01 NA 1.518263 2.072430 0.8632923 848 Biopolymer transport protein [Intracellular trafficking and secretion] U COG0848: Biopolymer transport protein 1.654759 2.167296 0.7658526 - - - hypothetical protein TRUE TRUE -17 TRUE 2.3806514 2.2673951 2.63535629 0.8692997 0.6561433 U 0.6970199 0.9407292 3.53125 0.841536177 0.91590916 0.807108744 9.830055e-01 TRUE 0.5 9.830055e-01 TRUE 9.556609e-01 0.9407292 0.80231622 0.8397594 334802 18387 2411407 2411408 1 133 Same + + 20.1875546 7.307869e+00 0 1.036372e+02 NA 1.654759 2.167296 0.7658526 - - - hypothetical protein 1.878962 2.482954 0.8163460 823 Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] U COG0823: Periplasmic component of the Tol biopolymer transport system TRUE TRUE -16 TRUE 2.6426124 2.4142271 2.05797328 0.8692997 0.6561433 U 0.6970199 0.9206795 24.94375 0.514657740 0.88501275 0.455189777 8.908476e-01 TRUE 0.5 8.908476e-01 TRUE 7.758345e-01 0.9206795 0.76547002 0.7930675 334802 18387 2411408 2411409 1 18 Same + + 36.4063278 2.273572e+01 0 3.357708e+02 342.7 1.878962 2.482954 0.8163460 823 Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] U COG0823: Periplasmic component of the Tol biopolymer transport system 1.556178 2.097447 0.8029769 2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane] M COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins - TRUE TRUE -15 TRUE 3.0653089 3.0925133 2.63535629 0.8692997 0.8936492 N 0.6844676 0.9587743 9.59375 0.844357520 0.94261161 0.810404948 9.889020e-01 TRUE 0.5 9.889020e-01 TRUE 9.648948e-01 0.9587743 0.83516088 0.8847799 334802 18387 2411409 2411410 1 20 Same + + 24.8164413 2.255339e+01 0 2.598106e+02 342.7 1.556178 2.097447 0.8029769 2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane] M COG2885: Outer membrane protein and related peptidoglycan-associated (lipo)proteins 1.453725 1.903034 0.7379403 1729 Uncharacterized protein conserved in bacteria [Function unknown] S COG1729: Uncharacterized protein conserved in bacteria TRUE TRUE -14 TRUE 2.7973582 2.9189233 2.62314227 0.8692997 0.8936492 U 0.6970199 0.9533753 9.96250 0.842239624 0.93472833 0.807930139 9.870891e-01 TRUE 0.5 9.870891e-01 TRUE 9.618787e-01 0.9533753 0.82536518 0.8709943 334802 18387 2411410 2411411 1 598 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 342.7 1.453725 1.903034 0.7379403 1729 Uncharacterized protein conserved in bacteria [Function unknown] S COG1729: Uncharacterized protein conserved in bacteria 2.426263 3.228949 0.9818387 - - - COG2801: Transposase and inactivated derivatives TRUE TRUE -13 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 U 0.6970199 0.6195361 37.62500 0.008632410 0.18036720 0.006814042 1.912512e-03 FALSE 0.5 1.912512e-03 FALSE 1.695306e-03 0.6195361 0.16319661 0.3496633 334802 18387 2411411 2411412 1 96 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 342.7 2.426263 3.228949 0.9818387 - - - COG2801: Transposase and inactivated derivatives 2.772291 3.701254 0.9625385 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG2801: Transposase and inactivated derivatives TRUE TRUE -12 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 U 0.6970199 0.6195361 21.05625 0.476912589 0.18036720 0.418049335 1.671061e-01 FALSE 0.5 1.671061e-01 FALSE 1.509655e-01 0.6195361 0.16319661 0.3496633 334802 18387 2411412 2411413 1 73 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 NA 2.772291 3.701254 0.9625385 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG2801: Transposase and inactivated derivatives 2.263547 2.869442 0.8860194 - - - COG3464: Transposase and inactivated derivatives TRUE TRUE -11 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.6561433 U 0.6970199 0.5957476 17.85000 0.648720193 0.09434480 0.592678079 1.613410e-01 FALSE 0.5 1.613410e-01 FALSE 1.879074e-01 0.5957476 0.11134422 0.3273221 334802 18387 2411413 2411414 1 583 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 NA 2.263547 2.869442 0.8860194 - - - COG3464: Transposase and inactivated derivatives 1.470302 1.890511 0.6344992 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M COG3203: Outer membrane protein (porin) TRUE TRUE -10 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.6561433 U 0.6970199 0.5957476 37.44375 0.009362356 0.09434480 0.007391375 9.835536e-04 FALSE 0.5 9.835536e-04 FALSE 1.182743e-03 0.5957476 0.11134422 0.3273221 334802 18387 2411414 2411415 1 192 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 342.7 1.470302 1.890511 0.6344992 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M COG3203: Outer membrane protein (porin) 2.283535 3.050981 0.8869106 3464 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG3464: Transposase and inactivated derivatives - TRUE TRUE -9 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 N 0.6844676 0.6181039 28.54375 0.432457217 0.17537546 0.375145800 1.394541e-01 FALSE 0.5 1.394541e-01 FALSE 1.268212e-01 0.6181039 0.16009397 0.3482838 334802 18387 2411416 2411417 1 538 Same - - 1.7917595 -1.030102e+02 0 -1.667632e+01 342.7 1.721893 2.330901 0.8369276 782 Transcription elongation factor [Transcription] K COG0782: Transcription elongation factor 1.562856 2.086060 0.7060246 317 Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription] TK COG0317: Guanosine polyphosphate pyrophosphohydrolases/synthetases K FALSE TRUE -9 TRUE 0.9683039 0.2913776 0.02961445 0.8692997 0.8936492 Y 2.5176965 0.7682885 37.10625 0.010906977 0.59747228 0.008613646 1.610417e-02 FALSE 0.5 1.610417e-02 FALSE 9.787277e-03 0.7682885 0.47266457 0.5226278 334802 18387 2411417 2411418 1 67 Same - - 29.5449210 1.806695e+01 0 8.420127e+01 342.7 1.562856 2.086060 0.7060246 317 Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription] TK COG0317: Guanosine polyphosphate pyrophosphohydrolases/synthetases 1.805859 2.420387 1.0063192 1758 DNA-directed RNA polymerase, subunit K/omega [Transcription] K COG1758: DNA-directed RNA polymerase, subunit K/omega K FALSE TRUE -10 TRUE 2.9210816 2.3229201 2.39414638 0.8692997 0.8936492 Y 2.5176965 0.9789677 17.12500 0.682153862 0.97132583 0.628390204 9.864316e-01 TRUE 0.5 9.864316e-01 TRUE 9.357489e-01 0.9789677 0.87156418 0.9389082 334802 18387 2411418 2411419 1 61 Same - - 39.5724777 2.422879e+01 0 1.233502e+02 342.7 1.805859 2.420387 1.0063192 1758 DNA-directed RNA polymerase, subunit K/omega [Transcription] K COG1758: DNA-directed RNA polymerase, subunit K/omega 1.369514 1.835812 0.7256599 194 Guanylate kinase [Nucleotide transport and metabolism] F COG0194: Guanylate kinase - FALSE TRUE -11 TRUE 3.1326801 2.4866824 2.74601470 0.8692997 0.8936492 N 0.6844676 0.9650148 16.26875 0.726695446 0.95161363 0.676897414 9.812358e-01 TRUE 0.5 9.812358e-01 TRUE 9.361325e-01 0.9650148 0.84645019 0.9010654 334802 18387 2411419 2411420 1 7 Same - - 83.3343013 1.197472e+01 0 3.767793e+02 NA 1.369514 1.835812 0.7256599 194 Guanylate kinase [Nucleotide transport and metabolism] F COG0194: Guanylate kinase 1.316998 1.824530 0.6833310 1561 Uncharacterized stress-induced protein [Function unknown] S COG1561: Uncharacterized stress-induced protein FALSE TRUE -12 TRUE 3.4958661 3.1564893 2.22122034 0.8692997 0.6561433 U 0.6970199 0.9506858 7.58125 0.852588820 0.93076792 0.820049177 9.873028e-01 TRUE 0.5 9.873028e-01 TRUE 9.635479e-01 0.9506858 0.82047558 0.8642295 334802 18387 2411421 2411422 1 -3 Same + + 75.5286739 1.317191e+01 0 3.359232e+02 342.7 1.458009 1.970307 0.7333766 689 RNase PH [Translation, ribosomal structure and biogenesis] J COG0689: RNase PH 1.582397 2.140916 0.8058083 127 Xanthosine triphosphate pyrophosphatase [Nucleotide transport and metabolism] F COG0127: Xanthosine triphosphate pyrophosphatase - TRUE TRUE -12 TRUE 3.4584987 3.0986726 2.25305116 0.8692997 0.8936492 N 0.6844676 0.9553053 3.53125 0.841536177 0.93755666 0.807108744 9.876139e-01 TRUE 0.5 9.876139e-01 TRUE 9.625775e-01 0.9553053 0.82886998 0.8758905 334802 18387 2411422 2411423 1 -3 Same + + 30.2790617 2.288702e+01 0 3.803439e+02 342.7 1.582397 2.140916 0.8058083 127 Xanthosine triphosphate pyrophosphatase [Nucleotide transport and metabolism] F COG0127: Xanthosine triphosphate pyrophosphatase 1.586905 2.125386 0.7445340 635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] H COG0635: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - TRUE TRUE -11 TRUE 2.9476607 3.1627190 2.64760014 0.8692997 0.8936492 N 0.6844676 0.9564081 3.53125 0.841536177 0.93916761 0.807108744 9.879501e-01 TRUE 0.5 9.879501e-01 TRUE 9.630847e-01 0.9564081 0.83087105 0.8787040 334802 18387 2411423 2411424 1 2101 Same + + 0.0000000 -9.776684e+01 0 -9.776684e+01 342.7 1.586905 2.125386 0.7445340 635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] H COG0635: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 1.640436 2.230691 0.8776768 - - - hypothetical protein TRUE TRUE -10 TRUE 0.4763389 0.2949439 0.03355020 0.8692997 0.8936492 U 0.6970199 0.5157692 40.30000 0.002868750 0.01756506 0.002261694 5.143560e-05 FALSE 0.5 5.143560e-05 FALSE 6.378758e-05 0.5157692 0.02169197 0.2601861 334802 18387 2411424 2411425 1 449 Same + + 0.0000000 -7.992085e+01 0 1.286692e+00 342.7 1.640436 2.230691 0.8776768 - - - hypothetical protein 1.504878 2.050175 0.7165709 - - - COG0477: Permeases of the major facilitator superfamily TRUE TRUE -9 TRUE 0.4763389 0.8518752 0.08315490 0.8692997 0.8936492 U 0.6970199 0.5133376 35.81250 0.019727117 0.01756506 0.015608506 3.596716e-04 FALSE 0.5 3.596716e-04 FALSE 4.460118e-04 0.5133376 0.02169197 0.2583166 334802 18387 2411425 2411426 1 181 Same + + 0.0000000 1.535372e+00 0 1.535372e+00 NA 1.504878 2.050175 0.7165709 - - - COG0477: Permeases of the major facilitator superfamily 2.214619 3.177492 1.0894006 - - - hypothetical protein TRUE TRUE -8 TRUE 0.4763389 0.9093434 1.41845071 0.8692997 0.6561433 U 0.6970199 0.7232587 27.90000 0.489099067 0.48931537 0.429968051 4.784245e-01 FALSE 0.5 4.784245e-01 FALSE 3.713433e-01 0.7232587 0.38157991 0.4632127 334802 18387 2411429 2411430 1 191 Same - - 0.0000000 -1.639201e+00 0 1.337858e+00 NA 1.517309 2.126058 0.8681449 - - - hypothetical protein 1.930504 2.653737 0.9816339 851 Septum formation topological specificity factor [Cell division and chromosome partitioning] D COG0851: Septum formation topological specificity factor FALSE TRUE -8 TRUE 0.4763389 0.8607338 0.41061412 0.8692997 0.6561433 U 0.6970199 0.5500780 28.46875 0.440016341 0.01756506 0.382378088 1.385416e-02 FALSE 0.5 1.385416e-02 FALSE 1.712440e-02 0.5500780 0.02169197 0.2875909 334802 18387 2411430 2411431 1 13 Same - - 71.5053774 2.374859e+01 0 4.193120e+02 NA 1.930504 2.653737 0.9816339 851 Septum formation topological specificity factor [Cell division and chromosome partitioning] D COG0851: Septum formation topological specificity factor 1.289017 1.739266 0.6768133 2894 Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] D COG2894: Septum formation inhibitor-activating ATPase D FALSE TRUE -9 TRUE 3.4266554 3.2065142 2.67804579 0.8692997 0.6561433 Y 2.5176965 0.9844098 8.54375 0.849568674 0.97886276 0.816505843 9.961910e-01 TRUE 0.5 9.961910e-01 TRUE 9.767093e-01 0.9844098 0.88131201 0.9542311 334802 18387 2411431 2411432 1 74 Same - - 16.9664086 2.269877e+01 0 2.119128e+02 342.7 1.289017 1.739266 0.6768133 2894 Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] D COG2894: Septum formation inhibitor-activating ATPase 1.778715 2.423402 0.8474639 850 Septum formation inhibitor [Cell division and chromosome partitioning] D COG0850: Septum formation inhibitor D FALSE TRUE -10 TRUE 2.4996826 2.7647189 2.63244548 0.8692997 0.8936492 Y 2.5176965 0.9773100 17.95000 0.643433058 0.96901332 0.587084341 9.825878e-01 TRUE 0.5 9.825878e-01 TRUE 9.226452e-01 0.9773100 0.86858961 0.9343050 334802 18387 2411432 2411433 1 208 Same - - 0.0000000 2.625817e+00 0 2.625817e+00 342.7 1.778715 2.423402 0.8474639 850 Septum formation inhibitor [Cell division and chromosome partitioning] D COG0850: Septum formation inhibitor 1.662392 2.221997 0.8545900 - - - COG0454: Histone acetyltransferase HPA2 and related acetyltransferases FALSE TRUE -11 TRUE 0.4763389 1.0799015 1.59998542 0.8692997 0.8936492 U 0.6970199 0.7655900 29.31875 0.348118037 0.59134910 0.296151339 4.359103e-01 FALSE 0.5 4.359103e-01 FALSE 3.189849e-01 0.7655900 0.46726716 0.5188599 334802 18387 2411437 2411438 1 198 Same - - 18.4647880 1.172629e+00 0 2.246169e+02 342.7 1.317491 1.777375 0.6170220 2256 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] L COG2256: ATPase related to the helicase subunit of the Holliday junction resolvase 1.472390 1.921407 0.7178429 2834 Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane] M COG2834: Outer membrane lipoprotein-sorting protein - FALSE TRUE -12 TRUE 2.5660877 2.7993978 1.30874750 0.8692997 0.8936492 N 0.6844676 0.8704246 28.88125 0.396550296 0.80131551 0.341137178 7.260507e-01 TRUE 0.5 7.260507e-01 TRUE 5.731878e-01 0.8704246 0.67144532 0.6892507 334802 18387 2411438 2411439 1 58 Same - - 22.8468146 2.128489e+01 0 9.908054e+01 342.7 1.472390 1.921407 0.7178429 2834 Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane] M COG2834: Outer membrane lipoprotein-sorting protein 1.366101 1.877919 0.6566669 1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning] D COG1674: DNA segregation ATPase FtsK/SpoIIIE and related proteins - FALSE TRUE -13 TRUE 2.7181750 2.3950562 2.56195022 0.8692997 0.8936492 N 0.6844676 0.9511303 15.90000 0.744624653 0.93142401 0.696730113 9.753716e-01 TRUE 0.5 9.753716e-01 TRUE 9.305532e-01 0.9511303 0.82128416 0.8653429 334802 18387 2411440 2411441 1 271 Same + + 5.4398169 9.170670e-01 0 1.916947e+00 NA 1.239098 1.633253 0.5949663 492 Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] O COG0492: Thioredoxin reductase 1.524877 2.064845 0.7785117 2840 Uncharacterized protein conserved in bacteria [Function unknown] S COG2840: Uncharacterized protein conserved in bacteria TRUE TRUE -13 TRUE 1.6778573 0.9731137 1.25527264 0.8692997 0.6561433 U 0.6970199 0.8116302 31.73750 0.133077631 0.69023978 0.107898625 2.548755e-01 FALSE 0.5 2.548755e-01 FALSE 1.625057e-01 0.8116302 0.55831225 0.5872330 334802 18387 2411441 2411442 1 26 Same + + 0.0000000 4.131458e+00 0 2.898984e+00 NA 1.524877 2.064845 0.7785117 2840 Uncharacterized protein conserved in bacteria [Function unknown] S COG2840: Uncharacterized protein conserved in bacteria 1.378305 1.914367 0.7440695 2860 Predicted membrane protein [Function unknown] S COG2860: Predicted membrane protein TRUE TRUE -12 TRUE 0.4763389 1.1515573 1.81672218 0.8692997 0.6561433 U 0.6970199 0.7759025 11.16250 0.831237175 0.61451958 0.795116965 8.870315e-01 TRUE 0.5 8.870315e-01 TRUE 8.243093e-01 0.7759025 0.48785233 0.5334117 334802 18387 2411443 2411444 1 125 Same - - 10.1402973 7.116804e+00 0 7.788887e+01 342.7 1.261414 1.682473 0.5926621 3839 ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] G COG3839: ABC-type sugar transport systems, ATPase components 1.320111 1.768075 0.6563642 395 ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism] G COG0395: ABC-type sugar transport system, permease component G FALSE TRUE -12 TRUE 2.0973601 2.2824437 2.04888652 0.8692997 0.8936492 Y 2.5176965 0.9589465 24.24375 0.494710029 0.94286151 0.435478871 9.417108e-01 TRUE 0.5 9.417108e-01 TRUE 8.325434e-01 0.9589465 0.83547278 0.8852241 334802 18387 2411444 2411445 1 2 Same - - 28.0128442 7.108836e+00 0 1.464347e+02 259.0 1.320111 1.768075 0.6563642 395 ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism] G COG0395: ABC-type sugar transport system, permease component 1.342628 1.818947 0.7004282 1175 ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism] G COG1175: ABC-type sugar transport systems, permease components G FALSE TRUE -13 TRUE 2.8600131 2.5698184 2.04687031 0.8692997 1.4329445 Y 2.5176965 0.9770429 6.38125 0.852930914 0.96864007 0.820450883 9.944486e-01 TRUE 0.5 9.944486e-01 TRUE 9.744722e-01 0.9770429 0.86811022 0.9335662 334802 18387 2411445 2411446 1 253 Same - - 19.9827601 3.644343e+00 0 1.283080e+02 259.0 1.342628 1.818947 0.7004282 1175 ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism] G COG1175: ABC-type sugar transport systems, permease components 1.309490 1.697036 0.6011949 1653 ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism] G COG1653: ABC-type sugar transport system, periplasmic component G FALSE TRUE -14 TRUE 2.6290102 2.5027961 1.76805740 0.8692997 1.4329445 Y 2.5176965 0.9684570 31.00625 0.190907169 0.95652943 0.156765077 8.384989e-01 TRUE 0.5 8.384989e-01 TRUE 5.772535e-01 0.9684570 0.85266217 0.9102142 334802 18387 2411447 2411448 1 88 Same + + 58.3116065 4.554161e+00 0 2.832414e+02 342.7 1.254043 1.698970 0.5907569 364 Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] G COG0364: Glucose-6-phosphate 1-dehydrogenase 1.462279 1.999084 0.7536906 363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism] G COG0363: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase G TRUE TRUE -14 TRUE 3.3269495 2.9828342 1.85560919 0.8692997 0.8936492 Y 2.5176965 0.9731087 19.60625 0.529031795 0.96311733 0.469509650 9.670319e-01 TRUE 0.5 9.670319e-01 TRUE 8.743755e-01 0.9731087 0.86103995 0.9227702 334802 18387 2411448 2411449 1 41 Same + + 0.0000000 2.799316e+00 0 2.799316e+00 342.7 1.462279 1.999084 0.7536906 363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism] G COG0363: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 1.380635 1.837894 0.6124751 837 Glucokinase [Carbohydrate transport and metabolism] G COG0837: Glucokinase G TRUE TRUE -13 TRUE 0.4763389 1.1366200 1.66525952 0.8692997 0.8936492 Y 2.5176965 0.8917667 13.35000 0.805032182 0.83801231 0.764889702 9.552790e-01 TRUE 0.5 9.552790e-01 TRUE 9.106470e-01 0.8917667 0.71167075 0.7312191 334802 18387 2411449 2411450 1 471 Same + + 0.0000000 -8.806042e+01 0 -3.850771e+00 342.7 1.380635 1.837894 0.6124751 837 Glucokinase [Carbohydrate transport and metabolism] G COG0837: Glucokinase 1.400545 1.852122 0.6751017 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - TRUE TRUE -12 TRUE 0.4763389 0.3148618 0.04926303 0.8692997 0.8936492 N 0.6844676 0.5168042 36.10000 0.017296371 0.01756506 0.013678168 3.145876e-04 FALSE 0.5 3.145876e-04 FALSE 3.901094e-04 0.5168042 0.02169197 0.2609846 334802 18387 2411450 2411451 1 86 Same + + 3.6888795 1.715389e+00 0 1.645516e+01 316.0 1.400545 1.852122 0.6751017 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET COG0834: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 1.344313 1.893569 0.7735269 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E COG0765: ABC-type amino acid transport system, permease component E TRUE TRUE -11 TRUE 1.3775144 1.6393485 1.46248050 0.8692997 0.7296035 Y 2.5176965 0.9101426 19.43125 0.540568485 0.86822985 0.481074193 8.857483e-01 TRUE 0.5 8.857483e-01 TRUE 7.755269e-01 0.9101426 0.74595523 0.7698169 334802 18387 2411451 2411452 1 47 Same + + 0.0000000 2.198464e-01 0 -3.191501e-01 17.0 1.344313 1.893569 0.7735269 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E COG0765: ABC-type amino acid transport system, permease component 1.435024 1.964191 0.7317671 1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] E COG1126: ABC-type polar amino acid transport system, ATPase component E TRUE TRUE -10 TRUE 0.4763389 0.3707961 1.13806334 0.8692997 2.8379155 Y 2.5176965 0.9303087 14.28750 0.792825974 0.90001743 0.750947821 9.717900e-01 TRUE 0.5 9.717900e-01 TRUE 9.325497e-01 0.9303087 0.78321265 0.8150767 334802 18387 2411452 2411453 1 71 Same + + 0.0000000 1.711440e-01 0 -1.867476e+00 342.7 1.435024 1.964191 0.7317671 1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] E COG1126: ABC-type polar amino acid transport system, ATPase component 1.516714 2.071032 0.7528763 2515 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism] E COG2515: 1-aminocyclopropane-1-carboxylate deaminase E TRUE TRUE -9 TRUE 0.4763389 0.3332044 0.94534264 0.8692997 0.8936492 Y 2.5176965 0.8363853 17.63125 0.658775283 0.73891101 0.603356505 8.452939e-01 TRUE 0.5 8.452939e-01 TRUE 7.483642e-01 0.8363853 0.60636689 0.6279601 334802 18387 2411453 2411454 1 78 Same + + 0.0000000 -5.756756e-01 0 -5.756756e-01 NA 1.516714 2.071032 0.7528763 2515 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism] E COG2515: 1-aminocyclopropane-1-carboxylate deaminase 1.678272 2.236092 0.8557282 - - - COG0606: Predicted ATPase with chaperone activity TRUE TRUE -8 TRUE 0.4763389 0.3638802 0.45783604 0.8692997 0.6561433 U 0.6970199 0.5693008 18.31875 0.620859367 0.01756506 0.563364117 2.844501e-02 FALSE 0.5 2.844501e-02 FALSE 8.378553e-02 0.5693008 0.05289067 0.3038353 334802 18387 2411456 2411457 1 100 Same + + 0.0000000 4.677157e-01 0 4.677157e-01 NA 1.907823 2.596577 0.8987801 - - - hypothetical protein 1.557424 2.079450 0.8121622 - - - hypothetical protein TRUE TRUE -7 TRUE 0.4763389 0.7611603 1.19135322 0.8692997 0.6561433 U 0.6970199 0.6902230 22.02500 0.463222185 0.40099254 0.404741229 3.661641e-01 FALSE 0.5 3.661641e-01 FALSE 2.825433e-01 0.6902230 0.31335014 0.4238625 334802 18387 2411457 2411458 1 500 Same + + 0.0000000 -6.513582e+01 0 1.829788e+00 NA 1.557424 2.079450 0.8121622 - - - hypothetical protein 1.313861 1.751399 0.6357103 1 Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism] H COG0001: Glutamate-1-semialdehyde aminotransferase TRUE TRUE -6 TRUE 0.4763389 0.9604078 0.13477433 0.8692997 0.6561433 U 0.6970199 0.4958649 36.60625 0.013709270 0.01756506 0.010833175 2.484547e-04 FALSE 0.5 2.484547e-04 FALSE 3.081052e-04 0.4958649 0.02169197 0.2451516 334802 18387 2411458 2411459 1 29 Same + + 2.0794415 -6.098993e+00 0 -8.115199e+01 342.7 1.313861 1.751399 0.6357103 1 Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism] H COG0001: Glutamate-1-semialdehyde aminotransferase 1.348914 1.833443 0.6453723 117 Pyrimidine deaminase [Coenzyme metabolism] H COG1985: Pyrimidine reductase, riboflavin biosynthesis H TRUE TRUE -5 TRUE 1.0305953 0.2939713 0.29879179 0.8692997 0.8936492 Y 2.5176965 0.8076902 11.60000 0.825872060 0.68221803 0.788895183 9.105715e-01 TRUE 0.5 9.105715e-01 TRUE 8.531810e-01 0.8076902 0.55060651 0.5810223 334802 18387 2411459 2411460 1 15 Same + + 99.7713098 1.130208e+01 0 3.939727e+02 342.7 1.348914 1.833443 0.6453723 117 Pyrimidine deaminase [Coenzyme metabolism] H COG1985: Pyrimidine reductase, riboflavin biosynthesis 1.627585 2.234580 0.8260416 307 Riboflavin synthase alpha chain [Coenzyme metabolism] H COG0307: Riboflavin synthase alpha chain H TRUE TRUE -4 TRUE 3.5631755 3.1814483 2.20330688 0.8692997 0.8936492 Y 2.5176965 0.9812752 8.95625 0.847706769 0.97453181 0.814324152 9.953269e-01 TRUE 0.5 9.953269e-01 TRUE 9.751336e-01 0.9812752 0.87570065 0.9453655 334802 18387 2411460 2411461 1 463 Same + + 83.2155613 -9.785704e+01 0 3.921503e+02 342.7 1.627585 2.234580 0.8260416 307 Riboflavin synthase alpha chain [Coenzyme metabolism] H COG0307: Riboflavin synthase alpha chain 1.375477 1.856636 0.6698869 108 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism] H COG0108: 3,4-dihydroxy-2-butanone 4-phosphate synthase H TRUE TRUE -3 TRUE 3.4931892 3.1751985 0.03345936 0.8692997 0.8936492 Y 2.5176965 0.9070715 35.98125 0.018263284 0.86326499 0.014445787 1.051043e-01 FALSE 0.5 1.051043e-01 FALSE 5.034624e-02 0.9070715 0.74024781 0.7631978 334802 18387 2411461 2411462 1 80 Same + + 92.2262305 2.392933e+01 0 4.456304e+02 7.0 1.375477 1.856636 0.6698869 108 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism] H COG0108: 3,4-dihydroxy-2-butanone 4-phosphate synthase 1.534879 2.104347 0.7988239 54 Riboflavin synthase beta-chain [Coenzyme metabolism] H COG0054: Riboflavin synthase beta-chain H TRUE TRUE -2 TRUE 3.5388581 3.2295845 2.69333631 0.8692997 3.1892152 Y 2.5176965 0.9949242 18.55625 0.604376864 0.99319100 0.546209015 9.955323e-01 TRUE 0.5 9.955323e-01 TRUE 9.322480e-01 0.9949242 0.90007053 0.9847843 334802 18387 2411462 2411463 1 -3 Same + + 78.1563082 2.032561e+01 0 4.626113e+02 342.7 1.534879 2.104347 0.7988239 54 Riboflavin synthase beta-chain [Coenzyme metabolism] H COG0054: Riboflavin synthase beta-chain 1.476858 2.004983 0.8048280 781 Transcription termination factor [Transcription] K COG0781: Transcription termination factor - TRUE TRUE -1 TRUE 3.4718173 3.2485261 2.51174053 0.8692997 0.8936492 N 0.6844676 0.9627619 3.53125 0.841536177 0.94837719 0.807108744 9.898541e-01 TRUE 0.5 9.898541e-01 TRUE 9.659649e-01 0.9627619 0.84237861 0.8951418 334802 18387 2411463 2411464 1 65 Same + + 0.0000000 1.399630e+01 0 -4.294018e+01 342.7 1.476858 2.004983 0.8048280 781 Transcription termination factor [Transcription] K COG0781: Transcription termination factor 1.577491 2.149044 0.7753379 436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] E COG0436: Aspartate/tyrosine/aromatic aminotransferase - TRUE TRUE 0 TRUE 0.4763389 0.2915078 2.26907057 0.8692997 0.8936492 N 0.6844676 0.8521540 16.74375 0.701912135 0.76843974 0.649774713 8.865466e-01 TRUE 0.5 8.865466e-01 TRUE 8.049152e-01 0.8521540 0.63665678 0.6555435 334802 18387 2411466 2411467 1 62 Same + + 0.0000000 2.306839e+00 0 -8.132398e+00 NA 1.457163 1.954169 0.6959222 43 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism] H COG0043: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 1.582246 2.200642 0.8188118 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E COG1280: Putative threonine efflux protein - TRUE TRUE 1 TRUE 0.4763389 0.2996541 1.54720331 0.8692997 0.6561433 N 0.6844676 0.7510099 16.36875 0.721574924 0.55750442 0.671265954 7.655455e-01 TRUE 0.5 7.655455e-01 TRUE 6.688277e-01 0.7510099 0.43797129 0.4989766 334802 18387 2411468 2411469 1 192 Same - - 0.0000000 1.649130e-01 0 1.649130e-01 NA 1.450093 1.940700 0.7073255 1171 Threonine dehydratase [Amino acid transport and metabolism] E COG1171: Threonine dehydratase 2.033576 2.697882 0.9825032 - - - hypothetical protein FALSE TRUE 1 TRUE 0.4763389 0.6040048 0.93768766 0.8692997 0.6561433 U 0.6970199 0.6507340 28.54375 0.432457217 0.28364987 0.375145800 2.317847e-01 FALSE 0.5 2.317847e-01 FALSE 1.855595e-01 0.6507340 0.23018040 0.3808759 334802 18387 2411470 2411471 1 83 Same + + 0.0000000 -2.133646e+00 0 1.037569e+00 NA 1.747602 2.363836 0.8079077 5495 Uncharacterized conserved protein [Function unknown] S COG5495: Uncharacterized conserved protein 1.409920 2.052595 0.8138291 - - - COG0762: Predicted integral membrane protein TRUE TRUE 1 TRUE 0.4763389 0.8209992 0.38527078 0.8692997 0.6561433 U 0.6970199 0.5461570 18.98125 0.573042984 0.01756506 0.513972993 2.343421e-02 FALSE 0.5 2.343421e-02 FALSE 2.889952e-02 0.5461570 0.02169197 0.2843584 334802 18387 2411472 2411473 1 24 Same - - 8.8410143 3.545887e-01 0 2.749750e+01 NA 1.938441 2.580383 0.9250480 1993 Uncharacterized conserved protein [Function unknown] S COG1993: Uncharacterized conserved protein 1.831563 2.520746 0.9245181 239 Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning] D COG0239: Integral membrane protein possibly involved in chromosome condensation FALSE TRUE 1 TRUE 1.9905444 1.8591889 1.16524584 0.8692997 0.6561433 U 0.6970199 0.8146950 10.85625 0.834673313 0.69642590 0.799110801 9.205214e-01 TRUE 0.5 9.205214e-01 TRUE 8.673502e-01 0.8146950 0.56429527 0.5921139 334802 18387 2411475 2411476 1 232 Same - - 0.0000000 1.502730e-01 0 1.502730e-01 NA 1.768167 2.371959 0.8280910 - - - COG0500: SAM-dependent methyltransferases 2.085989 2.778597 0.9286852 846 NAD-dependent protein deacetylases, SIR2 family [Transcription] K COG0846: NAD-dependent protein deacetylases, SIR2 family FALSE TRUE 0 TRUE 0.4763389 0.5929733 0.92770397 0.8692997 0.6561433 U 0.6970199 0.6492259 30.29375 0.252484713 0.27888538 0.210190932 1.155358e-01 FALSE 0.5 1.155358e-01 FALSE 9.022322e-02 0.6492259 0.22696852 0.3793139 334802 18387 2411478 2411479 1 77 Same - - 0.0000000 4.317519e+00 0 4.317519e+00 NA 1.652660 2.252070 0.7621057 1968 Uncharacterized bacitracin resistance protein [Defense mechanisms] V COG1968: Uncharacterized bacitracin resistance protein 1.779169 2.383168 0.8492371 - - - hypothetical protein FALSE TRUE -1 TRUE 0.4763389 1.2315402 1.83184324 0.8692997 0.6561433 U 0.6970199 0.7767123 18.21250 0.627800577 0.61631285 0.570629978 7.304132e-01 TRUE 0.5 7.304132e-01 TRUE 6.178995e-01 0.7767123 0.48946392 0.5345721 334802 18387 2411480 2411481 1 82 Same + + 0.0000000 1.695364e+00 0 1.695364e+00 NA 1.469604 1.947591 0.6943906 635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] H COG0635: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 1.389128 1.842970 0.8298506 - - - hypothetical protein TRUE TRUE -1 TRUE 0.4763389 0.9427915 1.45836798 0.8692997 0.6561433 U 0.6970199 0.7287114 18.82500 0.584683134 0.50312332 0.525891178 5.877137e-01 TRUE 0.5 5.877137e-01 TRUE 4.765570e-01 0.7287114 0.39272576 0.4700347 334802 18387 2411481 2411482 1 134 Same + + 0.0000000 -1.043194e+01 0 -1.043194e+01 NA 1.389128 1.842970 0.8298506 - - - hypothetical protein 1.393244 1.897840 0.7428876 2518 Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] O COG2518: Protein-L-isoaspartate carboxylmethyltransferase TRUE TRUE 0 TRUE 0.4763389 0.2960707 0.25777013 0.8692997 0.6561433 U 0.6970199 0.5332344 25.03125 0.515179841 0.01756506 0.455708194 1.864448e-02 FALSE 0.5 1.864448e-02 FALSE 2.301907e-02 0.5332344 0.02169197 0.2738919 334802 18387 2411482 2411483 1 15 Same + + 4.8436620 1.756024e+01 0 3.039007e+01 342.7 1.393244 1.897840 0.7428876 2518 Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] O COG2518: Protein-L-isoaspartate carboxylmethyltransferase 1.531297 2.064667 0.8983783 607 Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] P COG0607: Rhodanese-related sulfurtransferase - TRUE TRUE 1 TRUE 1.5769795 1.9193725 2.37980970 0.8692997 0.8936492 N 0.6844676 0.9066511 8.95625 0.847706769 0.86258267 0.814324152 9.721759e-01 TRUE 0.5 9.721759e-01 TRUE 9.404712e-01 0.9066511 0.73946576 0.7622970 334802 18387 2411485 2411486 1 95 Same + + 19.5523079 1.342216e+01 0 1.657842e+02 NA 1.448087 1.902426 0.6605712 683 ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] E COG0683: ABC-type branched-chain amino acid transport systems, periplasmic component 1.475146 2.008384 0.7028861 559 Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism] E COG0559: Branched-chain amino acid ABC-type transport system, permease components E TRUE TRUE 2 TRUE 2.6064331 2.6343518 2.25624951 0.8692997 0.6561433 Y 2.5176965 0.9690795 20.41875 0.491755542 0.95741477 0.432575289 9.560496e-01 TRUE 0.5 9.560496e-01 TRUE 8.496191e-01 0.9690795 0.85378452 0.9118816 334802 18387 2411486 2411487 1 135 Same + + 19.6774710 1.849910e+01 0 1.680778e+02 259.0 1.475146 2.008384 0.7028861 559 Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism] E COG0559: Branched-chain amino acid ABC-type transport system, permease components 1.412461 1.925813 0.6978505 4177 ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism] E COG4177: ABC-type branched-chain amino acid transport system, permease component E TRUE TRUE 3 TRUE 2.6154499 2.6436595 2.41518917 0.8692997 1.4329445 Y 2.5176965 0.9800766 25.10625 0.515146142 0.97286838 0.455674729 9.744230e-01 TRUE 0.5 9.744230e-01 TRUE 8.800966e-01 0.9800766 0.87355260 0.9420041 334802 18387 2411487 2411488 1 -3 Same + + 34.2684572 1.516297e+01 0 2.457901e+02 342.7 1.412461 1.925813 0.6978505 4177 ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism] E COG4177: ABC-type branched-chain amino acid transport system, permease component 1.527422 2.074871 0.7294932 4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only] R COG4674: Uncharacterized ABC-type transport system, ATPase component TRUE TRUE 4 TRUE 3.0270215 2.8636792 2.29915740 0.8692997 0.8936492 U 0.6970199 0.9477111 3.53125 0.841536177 0.92636136 0.807108744 9.852521e-01 TRUE 0.5 9.852521e-01 TRUE 9.590241e-01 0.9477111 0.81505977 0.8568251 334802 18387 2411488 2411489 1 5 Same + + 34.2684572 1.429997e+01 0 2.421555e+02 342.7 1.527422 2.074871 0.7294932 4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only] R COG4674: Uncharacterized ABC-type transport system, ATPase component 1.506947 2.053951 0.7614993 410 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E COG0410: ABC-type branched-chain amino acid transport systems, ATPase component TRUE TRUE 5 TRUE 3.0270215 2.8577981 2.27549763 0.8692997 0.8936492 U 0.6970199 0.9468405 7.08750 0.853223210 0.92506646 0.820794169 9.862568e-01 TRUE 0.5 9.862568e-01 TRUE 9.620518e-01 0.9468405 0.81347319 0.8546733 334802 18387 2411489 2411490 1 251 Same + + 14.7370992 -1.985087e+00 0 4.114323e+01 342.7 1.506947 2.053951 0.7614993 410 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E COG0410: ABC-type branched-chain amino acid transport systems, ATPase component 1.608665 2.186351 0.7681841 829 Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones] O COG0829: Urease accessory protein UreH - TRUE TRUE 6 TRUE 2.3763890 2.0453263 0.38922001 0.8692997 0.8936492 N 0.6844676 0.7636121 30.91250 0.199093136 0.58683360 0.163783407 2.609415e-01 FALSE 0.5 2.609415e-01 FALSE 1.766790e-01 0.7636121 0.46330621 0.5161160 334802 18387 2411490 2411491 1 222 Same + + 29.8835775 1.396460e+00 0 1.564529e+02 7.0 1.608665 2.186351 0.7681841 829 Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones] O COG0829: Urease accessory protein UreH 1.854507 2.534514 0.9610628 831 Urea amidohydrolase (urease) gamma subunit [Amino acid transport and metabolism] E COG0831: Urea amidohydrolase (urease) gamma subunit - TRUE TRUE 7 TRUE 2.9331453 2.6047154 1.38159007 0.8692997 3.1892152 N 0.6844676 0.9582439 29.91875 0.285680717 0.94184112 0.239608683 8.662502e-01 TRUE 0.5 8.662502e-01 TRUE 6.680179e-01 0.9582439 0.83419976 0.8834133 334802 18387 2411491 2411492 1 90 Same + + 37.2360186 -1.046769e+00 0 2.770077e+02 3.0 1.854507 2.534514 0.9610628 831 Urea amidohydrolase (urease) gamma subunit [Amino acid transport and metabolism] E COG0831: Urea amidohydrolase (urease) gamma subunit 1.374176 1.841527 0.8358241 832 Urea amidohydrolase (urease) beta subunit [Amino acid transport and metabolism] E COG0832: Urea amidohydrolase (urease) beta subunit E TRUE TRUE 8 TRUE 3.0901608 2.9667799 0.43301030 0.8692997 3.3522898 Y 2.5176965 0.9683563 19.88750 0.512682953 0.95638613 0.453230087 9.584544e-01 TRUE 0.5 9.584544e-01 TRUE 8.587484e-01 0.9683563 0.85248062 0.9099448 334802 18387 2411492 2411493 1 101 Same + + 35.9367356 1.960604e+01 0 2.666443e+02 3.0 1.374176 1.841527 0.8358241 832 Urea amidohydrolase (urease) beta subunit [Amino acid transport and metabolism] E COG0832: Urea amidohydrolase (urease) beta subunit 1.309305 1.717233 0.5983406 804 Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism] E COG0804: Urea amidohydrolase (urease) alpha subunit E TRUE TRUE 9 TRUE 3.0529272 2.9368154 2.46432255 0.8692997 3.3522898 Y 2.5176965 0.9929217 22.14375 0.461737349 0.99048555 0.403303007 9.889262e-01 TRUE 0.5 9.889262e-01 TRUE 8.813875e-01 0.9929217 0.89650551 0.9788663 334802 18387 2411493 2411494 1 18 Same + + 14.3704434 1.034091e+01 0 1.108446e+02 3.0 1.309305 1.717233 0.5983406 804 Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism] E COG0804: Urea amidohydrolase (urease) alpha subunit 1.626557 2.205839 0.8063965 2371 Urease accessory protein UreE [Posttranslational modification, protein turnover, chaperones] O COG2371: Urease accessory protein UreE - TRUE TRUE 10 TRUE 2.3593855 2.4493752 2.17921398 0.8692997 3.3522898 N 0.6844676 0.9712266 9.59375 0.844357520 0.96045942 0.810404948 9.924685e-01 TRUE 0.5 9.924685e-01 TRUE 9.703140e-01 0.9712266 0.85765259 0.9176630 334802 18387 2411494 2411495 1 -13 Same + + 19.5409274 1.868833e+01 0 1.536713e+02 7.0 1.626557 2.205839 0.8063965 2371 Urease accessory protein UreE [Posttranslational modification, protein turnover, chaperones] O COG2371: Urease accessory protein UreE 1.452403 1.976987 0.7459721 830 Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones] O COG0830: Urease accessory protein UreF O TRUE TRUE 11 TRUE 2.6030566 2.5973419 2.42296833 0.8692997 3.1892152 Y 2.5176965 0.9904070 0.73125 0.806039826 0.98707253 0.766044520 9.968584e-01 TRUE 0.5 9.968584e-01 TRUE 9.716965e-01 0.9904070 0.89202348 0.9715012 334802 18387 2411495 2411496 1 31 Same + + 49.0056259 1.965549e+01 0 3.171640e+02 7.0 1.452403 1.976987 0.7459721 830 Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones] O COG0830: Urease accessory protein UreF 1.479641 1.975928 0.7316565 378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] OK COG0378: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase O TRUE TRUE 12 TRUE 3.2391933 3.0557020 2.46769288 0.8692997 3.1892152 Y 2.5176965 0.9930709 11.83125 0.822909728 0.99068741 0.785467195 9.979812e-01 TRUE 0.5 9.979812e-01 TRUE 9.758268e-01 0.9930709 0.89677112 0.9793054 334802 18387 2411497 2411498 1 38 Same - - 0.0000000 -1.043714e+00 0 -4.461310e+00 NA 1.458301 2.000852 0.7178437 1519 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] M COG1519: 3-deoxy-D-manno-octulosonic-acid transferase 1.392856 1.891358 0.6993960 - - - hypothetical protein FALSE TRUE 12 TRUE 0.4763389 0.3105557 0.43347303 0.8692997 0.6561433 U 0.6970199 0.5658813 12.90625 0.809784525 0.01756506 0.770341380 7.073116e-02 FALSE 0.5 7.073116e-02 FALSE 1.679566e-01 0.5658813 0.04526975 0.3008964 334802 18387 2411498 2411499 1 16 Same - - 1.3862944 -6.018817e-01 0 -1.342198e+00 NA 1.392856 1.891358 0.6993960 - - - hypothetical protein 1.573770 2.170774 0.7796699 859 ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] M COG0859: ADP-heptose:LPS heptosyltransferase FALSE TRUE 11 TRUE 0.7965372 0.3453291 0.45617799 0.8692997 0.6561433 U 0.6970199 0.6099152 9.14375 0.846773536 0.14638493 0.813231425 4.865721e-01 FALSE 0.5 4.865721e-01 FALSE 4.783290e-01 0.6099152 0.14230759 0.3404828 334802 18387 2411499 2411500 1 181 Same - - 0.0000000 4.453497e+00 0 -1.195078e+01 342.7 1.573770 2.170774 0.7796699 859 ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] M COG0859: ADP-heptose:LPS heptosyltransferase 1.330424 1.785355 0.6315728 1109 Phosphomannomutase [Carbohydrate transport and metabolism] G COG1109: Phosphomannomutase - FALSE TRUE 10 TRUE 0.4763389 0.2942340 1.84703386 0.8692997 0.8936492 N 0.6844676 0.8071360 27.90000 0.489099067 0.68108356 0.429968051 6.715371e-01 TRUE 0.5 6.715371e-01 TRUE 5.387041e-01 0.8071360 0.54952149 0.5801545 334802 18387 2411501 2411502 1 -3 Same + + 1.3862944 2.231484e+00 0 1.442545e+00 NA 1.494041 2.088734 0.7243619 2244 Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only] R COG2244: Membrane protein involved in the export of O-antigen and teichoic acid 1.654157 2.262937 0.8024868 1216 Predicted glycosyltransferases [General function prediction only] R COG0463: Glycosyltransferases involved in cell wall biogenesis TRUE TRUE 10 TRUE 0.7965372 0.8937878 1.53484058 0.8692997 0.6561433 U 0.6970199 0.7716856 3.53125 0.841536177 0.60511971 0.807108744 8.905670e-01 TRUE 0.5 8.905670e-01 TRUE 8.302570e-01 0.7716856 0.47944832 0.5274110 334802 18387 2411502 2411503 1 134 Same + + 0.0000000 2.231484e+00 0 1.681437e+00 NA 1.654157 2.262937 0.8024868 1216 Predicted glycosyltransferases [General function prediction only] R COG0463: Glycosyltransferases involved in cell wall biogenesis 1.413744 1.932102 0.7048294 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M COG0438: Glycosyltransferase TRUE TRUE 11 TRUE 0.4763389 0.9369622 1.53484058 0.8692997 0.6561433 U 0.6970199 0.7401114 25.03125 0.515179841 0.53133479 0.455708194 5.464263e-01 TRUE 0.5 5.464263e-01 TRUE 4.307507e-01 0.7401114 0.41592438 0.4846169 334802 18387 2411503 2411504 1 15 Same + + 4.1588831 9.342578e-01 0 -1.203830e+01 342.7 1.413744 1.932102 0.7048294 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M COG0438: Glycosyltransferase 1.405482 1.897831 0.6892765 1087 UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] M COG1087: UDP-glucose 4-epimerase M TRUE TRUE 12 TRUE 1.4549992 0.2941057 1.26132943 0.8692997 0.8936492 Y 2.5176965 0.9158113 8.95625 0.847706769 0.87730683 0.814324152 9.754909e-01 TRUE 0.5 9.754909e-01 TRUE 9.453256e-01 0.9158113 0.75646692 0.7822199 334802 18387 2411504 2411505 1 28 Same + + 2.7725887 -2.690494e+00 0 -3.359810e+01 342.7 1.405482 1.897831 0.6892765 1087 UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] M COG1087: UDP-glucose 4-epimerase 1.490904 2.034831 0.7123734 472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane] M COG0472: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase M TRUE TRUE 13 TRUE 1.2137023 0.2911286 0.36540253 0.8692997 0.8936492 Y 2.5176965 0.8294395 11.45000 0.827756997 0.72554801 0.791079138 9.270318e-01 TRUE 0.5 9.270318e-01 TRUE 8.750067e-01 0.8294395 0.59294606 0.6162261 334802 18387 2411505 2411506 1 373 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 342.7 1.490904 2.034831 0.7123734 472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [Cell envelope biogenesis, outer membrane] M COG0472: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 2.426263 3.228949 0.9818387 - - - COG2801: Transposase and inactivated derivatives TRUE TRUE 14 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 U 0.6970199 0.6195361 34.36250 0.038616981 0.18036720 0.030677983 8.761896e-03 FALSE 0.5 8.761896e-03 FALSE 7.772857e-03 0.6195361 0.16319661 0.3496633 334802 18387 2411506 2411507 1 96 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 342.7 2.426263 3.228949 0.9818387 - - - COG2801: Transposase and inactivated derivatives 2.772291 3.703599 0.9625385 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG2801: Transposase and inactivated derivatives TRUE TRUE 15 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 U 0.6970199 0.6195361 21.05625 0.476912589 0.18036720 0.418049335 1.671061e-01 FALSE 0.5 1.671061e-01 FALSE 1.509655e-01 0.6195361 0.16319661 0.3496633 334802 18387 2411507 2411508 1 280 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 NA 2.772291 3.703599 0.9625385 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG2801: Transposase and inactivated derivatives 2.131807 2.782825 0.9952562 - - - hypothetical protein TRUE TRUE 16 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.6561433 U 0.6970199 0.5957476 32.01250 0.115440352 0.09434480 0.093239505 1.341285e-02 FALSE 0.5 1.341285e-02 FALSE 1.608869e-02 0.5957476 0.11134422 0.3273221 334802 18387 2411509 2411510 1 21 Same - - 0.0000000 1.869420e-01 0 1.869420e-01 NA 2.237965 3.025135 0.9082339 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] R COG0596: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 2.154981 2.954836 0.9217518 - - - COG1263: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific FALSE TRUE 16 TRUE 0.4763389 0.6461303 0.98401239 0.8692997 0.6561433 U 0.6970199 0.6578654 10.18125 0.840801350 0.30588340 0.806251027 6.994682e-01 TRUE 0.5 6.994682e-01 TRUE 6.319379e-01 0.6578654 0.24533241 0.3883381 334802 18387 2411510 2411511 1 533 Same - - 0.0000000 -8.023203e+01 0 1.851303e-01 NA 2.154981 2.954836 0.9217518 - - - COG1263: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 1.618423 2.143870 0.9057892 1773 Rubredoxin [Energy production and conversion] C COG1773: Rubredoxin FALSE TRUE 15 TRUE 0.4763389 0.6360789 0.07779292 0.8692997 0.6561433 U 0.6970199 0.4919597 37.02500 0.011318134 0.01756506 0.008939134 2.046328e-04 FALSE 0.5 2.046328e-04 FALSE 2.537649e-04 0.4919597 0.02169197 0.2422720 334802 18387 2411512 2411513 1 168 Same + + 0.0000000 -1.677184e+00 0 -2.693201e+00 NA 1.883216 2.522504 0.8976011 - - - hypothetical protein 1.373735 1.878327 0.6428072 488 ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] R COG0488: ATPase components of ABC transporters with duplicated ATPase domains TRUE TRUE 15 TRUE 0.4763389 0.3239799 0.40566271 0.8692997 0.6561433 U 0.6970199 0.5604154 27.35000 0.515803995 0.01756506 0.456328114 1.869026e-02 FALSE 0.5 1.869026e-02 FALSE 3.514027e-02 0.5604154 0.03305809 0.2962434 334802 18387 2411513 2411514 1 254 Same + + 0.0000000 -8.150923e+00 0 -2.460481e+01 342.7 1.373735 1.878327 0.6428072 488 ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] R COG0488: ATPase components of ABC transporters with duplicated ATPase domains 1.355979 1.839759 0.6372519 187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] L COG0187: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit TRUE TRUE 16 TRUE 0.4763389 0.2906897 0.27978837 0.8692997 0.8936492 U 0.6970199 0.5621964 31.05000 0.187120461 0.01756506 0.153527085 4.098804e-03 FALSE 0.5 4.098804e-03 FALSE 8.776928e-03 0.5621964 0.03704109 0.2977535 334802 18387 2411514 2411515 1 59 Same + + 14.5447968 -2.007761e+00 0 5.236154e+01 5.0 1.355979 1.839759 0.6372519 187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] L COG0187: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 1.370896 1.856930 0.6252630 188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair] L COG0188: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit L TRUE TRUE 17 TRUE 2.3678780 2.1447068 0.38834068 0.8692997 3.2668449 Y 2.5176965 0.9544802 16.02500 0.738747978 0.93634888 0.690209824 9.765245e-01 TRUE 0.5 9.765245e-01 TRUE 9.312843e-01 0.9544802 0.82737201 0.8737930 334802 18387 2411515 2411516 1 717 Same + + 0.0000000 -9.111270e+01 0 -7.507999e+00 NA 1.370896 1.856930 0.6252630 188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair] L COG0188: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 1.475889 2.063535 0.8496783 5615 Predicted integral membrane protein [Function unknown] S COG5615: Predicted integral membrane protein TRUE TRUE 18 TRUE 0.4763389 0.3008689 0.04147928 0.8692997 0.6561433 U 0.6970199 0.4922010 38.48750 0.005946427 0.01756506 0.004691168 1.069413e-04 FALSE 0.5 1.069413e-04 FALSE 1.326210e-04 0.4922010 0.02169197 0.2424493 334802 18387 2411520 2411521 1 5 Same + + 1.8325815 3.310082e-01 0 2.761507e+00 342.7 1.502299 2.051225 0.7465246 - - - COG0477: Permeases of the major facilitator superfamily 1.592830 2.126409 0.7407143 624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] E COG0624: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases TRUE TRUE 19 TRUE 0.9913179 1.1067831 1.15512159 0.8692997 0.8936492 U 0.6970199 0.7528267 7.08750 0.853223210 0.56179322 0.820794169 8.816920e-01 TRUE 0.5 8.816920e-01 TRUE 8.213580e-01 0.7528267 0.44163412 0.5014115 334802 18387 2411521 2411522 1 311 Same + + 1.8325815 -6.182605e+01 0 1.877388e+00 NA 1.592830 2.126409 0.7407143 624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] E COG0624: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 1.697513 2.252312 0.7727398 123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] BQ COG0123: Deacetylases, including yeast histone deacetylase and acetoin utilization protein - TRUE TRUE 20 TRUE 0.9913179 0.9680187 0.14197122 0.8692997 0.6561433 N 0.6844676 0.5626214 32.95625 0.074051703 0.01756506 0.059277091 1.427820e-03 FALSE 0.5 1.427820e-03 FALSE 3.148334e-03 0.5626214 0.03799103 0.2981147 334802 18387 2411523 2411524 1 189 Same - - 0.0000000 8.252347e-01 0 2.799316e+00 342.7 1.583505 2.220603 0.7879812 2059 Chromate transport protein ChrA [Inorganic ion transport and metabolism] P COG2059: Chromate transport protein ChrA 1.407074 1.909726 0.6520079 5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms] T COG2200: FOG: EAL domain - TRUE FALSE 20 TRUE 0.4763389 1.1366200 1.24470576 0.8692997 0.8936492 N 0.6844676 0.7116519 28.38750 0.447974370 0.45921817 0.390019722 4.079736e-01 FALSE 0.5 4.079736e-01 FALSE 3.113059e-01 0.7116519 0.35774555 0.4490081 334802 18387 2411524 2411525 1 271 Same - - 0.0000000 -2.039729e+00 0 2.492580e+00 342.7 1.407074 1.909726 0.6520079 5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms] T COG2200: FOG: EAL domain 1.532344 2.052516 0.7153162 384 Predicted epimerase, PhzC/PhzF homolog [General function prediction only] R COG0384: Predicted epimerase, PhzC/PhzF homolog TRUE FALSE 19 TRUE 0.4763389 1.0553517 0.38658497 0.8692997 0.8936492 U 0.6970199 0.5661199 31.73750 0.133077631 0.01756506 0.107898625 2.737035e-03 FALSE 0.5 2.737035e-03 FALSE 7.314452e-03 0.5661199 0.04580193 0.3011007 334802 18387 2411525 2411526 1 5 Same - - 0.0000000 -4.042536e+00 0 -1.457803e+01 NA 1.532344 2.052516 0.7153162 384 Predicted epimerase, PhzC/PhzF homolog [General function prediction only] R COG0384: Predicted epimerase, PhzC/PhzF homolog 1.394693 1.892729 0.7985429 251 Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis] J COG0251: Putative translation initiation inhibitor, yjgF family TRUE FALSE 18 TRUE 0.4763389 0.2923591 0.33014392 0.8692997 0.6561433 U 0.6970199 0.5469365 7.08750 0.853223210 0.01756506 0.820794169 9.414745e-02 FALSE 0.5 9.414745e-02 FALSE 1.141763e-01 0.5469365 0.02169197 0.2849989 334802 18387 2411527 2411528 1 96 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 342.7 2.426263 3.235191 0.9770515 - - - COG2801: Transposase and inactivated derivatives 2.797224 3.736907 0.9636138 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG2801: Transposase and inactivated derivatives FALSE FALSE 18 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 U 0.6970199 0.6195361 21.05625 0.476912589 0.18036720 0.418049335 1.671061e-01 FALSE 0.5 1.671061e-01 FALSE 1.509655e-01 0.6195361 0.16319661 0.3496633 334802 18387 2411531 2411532 1 3 Same - - 10.1884994 2.368675e+01 0 2.532430e+02 342.7 1.537212 2.093389 0.7346119 761 Penicillin tolerance protein [Lipid metabolism / Cell envelope biogenesis, outer membrane] IM COG0761: Penicillin tolerance protein 1.683004 2.248356 0.8558847 1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones] O COG1047: FKBP-type peptidyl-prolyl cis-trans isomerases 2 - TRUE FALSE 18 TRUE 2.0993342 2.8853060 2.67452360 0.8692997 0.8936492 N 0.6844676 0.9363244 6.59375 0.853122781 0.90923483 0.820676214 9.831039e-01 TRUE 0.5 9.831039e-01 TRUE 9.573059e-01 0.9363244 0.79425336 0.8292132 334802 18387 2411533 2411534 1 330 Same + + 15.1873002 -4.606310e+01 0 1.607203e+02 342.7 1.527946 2.132283 0.8085102 2003 DNA repair proteins [DNA replication, recombination, and repair] L COG2003: DNA repair proteins 1.894551 2.538560 0.9522676 227 Ribosomal protein L28 [Translation, ribosomal structure and biogenesis] J COG0227: Ribosomal protein L28 - FALSE FALSE 18 TRUE 2.3934664 2.6213580 0.17506674 0.8692997 0.8936492 N 0.6844676 0.7251731 33.43750 0.059764097 0.49418694 0.047693284 5.847074e-02 FALSE 0.5 5.847074e-02 FALSE 3.834592e-02 0.7251731 0.38549687 0.4655969 334802 18387 2411534 2411535 1 18 Same + + 45.0029538 2.422130e+01 0 3.789314e+02 42.0 1.894551 2.538560 0.9522676 227 Ribosomal protein L28 [Translation, ribosomal structure and biogenesis] J COG0227: Ribosomal protein L28 1.772530 2.193068 0.9866339 267 Ribosomal protein L33 [Translation, ribosomal structure and biogenesis] J COG0267: Ribosomal protein L33 J FALSE FALSE 19 TRUE 3.2060017 3.1606417 2.73947577 0.8692997 2.4987141 Y 2.5176965 0.9922678 9.59375 0.844357520 0.98959968 0.810404948 9.980665e-01 TRUE 0.5 9.980665e-01 TRUE 9.789072e-01 0.9922678 0.89534053 0.9769439 334802 18387 2411535 2411536 1 162 Same + + 0.0000000 3.351737e+00 0 -4.193847e+01 342.7 1.772530 2.193068 0.9866339 267 Ribosomal protein L33 [Translation, ribosomal structure and biogenesis] J COG0267: Ribosomal protein L33 1.474098 1.978786 0.6926332 29 Aspartate oxidase [Coenzyme metabolism] H COG0029: Aspartate oxidase - FALSE FALSE 20 TRUE 0.4763389 0.2914334 1.74584272 0.8692997 0.8936492 N 0.6844676 0.7949546 26.98750 0.520946316 0.65574493 0.461442571 6.744153e-01 TRUE 0.5 6.744153e-01 TRUE 5.464366e-01 0.7949546 0.52558987 0.5614266 334802 18387 2411537 2411538 1 -3 Same - - 61.1120411 1.617894e+01 0 3.853884e+01 9.0 1.424589 1.955218 0.7416669 157 Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism] H COG0157: Nicotinate-nucleotide pyrophosphorylase 1.494775 2.014546 0.7251144 379 Quinolinate synthase [Coenzyme metabolism] H COG0379: Quinolinate synthase H TRUE FALSE 20 TRUE 3.3530214 2.0052697 2.32948175 0.8692997 3.1263973 Y 2.5176965 0.9931917 3.53125 0.841536177 0.99085094 0.807108744 9.982643e-01 TRUE 0.5 9.982643e-01 TRUE 9.788323e-01 0.9931917 0.89698636 0.9796614 334802 18387 2411538 2411539 1 169 Same - - 0.0000000 -8.532740e-01 0 -2.965009e+00 342.7 1.494775 2.014546 0.7251144 379 Quinolinate synthase [Coenzyme metabolism] H COG0379: Quinolinate synthase 1.433520 1.916851 0.6745090 1398 Fatty-acid desaturase [Lipid metabolism] I COG1398: Fatty-acid desaturase - TRUE FALSE 19 TRUE 0.4763389 0.3219099 0.44137325 0.8692997 0.8936492 N 0.6844676 0.5899647 27.41250 0.514040368 0.07238487 0.454576927 7.624863e-02 FALSE 0.5 7.624863e-02 FALSE 1.037441e-01 0.5899647 0.09863581 0.3220689 334802 18387 2411539 2411540 1 200 Same - - 1.6094379 -2.371580e+00 0 6.891770e+00 342.7 1.433520 1.916851 0.6745090 1398 Fatty-acid desaturase [Lipid metabolism] I COG1398: Fatty-acid desaturase 1.324353 1.831841 0.6292774 668 Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] M COG3264: Small-conductance mechanosensitive channel - TRUE FALSE 18 TRUE 0.8530640 1.3491998 0.37743263 0.8692997 0.8936492 N 0.6844676 0.6047480 28.98750 0.384837733 0.12768724 0.330165822 8.389012e-02 FALSE 0.5 8.389012e-02 FALSE 8.620833e-02 0.6047480 0.13104262 0.3356342 334802 18387 2411540 2411541 1 12 Same - - 1.7346011 -6.857750e-01 0 7.276303e+00 342.7 1.324353 1.831841 0.6292774 668 Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] M COG3264: Small-conductance mechanosensitive channel 1.383037 1.894024 0.6785184 144 tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] J COG0144: tRNA and rRNA cytosine-C5-methylases - TRUE FALSE 17 TRUE 0.9207019 1.3674012 0.45169067 0.8692997 0.8936492 N 0.6844676 0.6260790 8.33125 0.850409367 0.20288081 0.817491615 5.913212e-01 TRUE 0.5 5.913212e-01 TRUE 5.506601e-01 0.6260790 0.17733957 0.3560231 334802 18387 2411541 2411542 1 -3 Same - - 4.3412046 8.714591e+00 0 5.651052e+00 342.7 1.383037 1.894024 0.6785184 144 tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] J COG0144: tRNA and rRNA cytosine-C5-methylases 1.644051 2.232615 0.8213115 299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism] F COG0299: Folate-dependent phosphoribosylglycinamide formyltransferase PurN - TRUE FALSE 16 TRUE 1.4785624 1.2949802 2.12221579 0.8692997 0.8936492 N 0.6844676 0.8889167 3.53125 0.841536177 0.83321377 0.807108744 9.636761e-01 TRUE 0.5 9.636761e-01 TRUE 9.273920e-01 0.8889167 0.70632447 0.7254431 334802 18387 2411543 2411544 1 112 Same + + 38.2762764 2.423105e+01 0 2.997361e+02 342.7 1.412028 1.915545 0.7094696 196 FAD synthase [Coenzyme metabolism] H COG0196: FAD synthase 1.311528 1.744010 0.5736083 60 Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J COG0060: Isoleucyl-tRNA synthetase - FALSE FALSE 16 TRUE 3.1126285 3.0171176 2.75196601 0.8692997 0.8936492 N 0.6844676 0.9632492 23.23125 0.455832666 0.94907859 0.397593610 9.398047e-01 TRUE 0.5 9.398047e-01 TRUE 8.184014e-01 0.9632492 0.84325978 0.8964189 334802 18387 2411544 2411545 1 0 Same + + 85.3881132 2.436763e+01 0 3.900139e+02 342.7 1.311528 1.744010 0.5736083 60 Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J COG0060: Isoleucyl-tRNA synthetase 1.329001 1.785963 0.7261531 597 Lipoprotein signal peptidase [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU COG0597: Lipoprotein signal peptidase - FALSE FALSE 17 TRUE 3.5092683 3.1710357 2.80401499 0.8692997 0.8936492 N 0.6844676 0.9706928 5.86250 0.852170963 0.95970371 0.819558604 9.927688e-01 TRUE 0.5 9.927688e-01 TRUE 9.717994e-01 0.9706928 0.85669129 0.9162212 334802 18387 2411545 2411546 1 62 Same + + 0.0000000 2.843839e+00 0 -7.644604e+01 342.7 1.329001 1.785963 0.7261531 597 Lipoprotein signal peptidase [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU COG0597: Lipoprotein signal peptidase 1.397659 1.892394 0.6910637 452 Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism] H COG0452: Phosphopantothenoylcysteine synthetase/decarboxylase - FALSE FALSE 18 TRUE 0.4763389 0.2936274 1.68373970 0.8692997 0.8936492 N 0.6844676 0.7871447 16.36875 0.721574924 0.63908714 0.671265954 8.210814e-01 TRUE 0.5 8.210814e-01 TRUE 7.296717e-01 0.7871447 0.51016613 0.5497598 334802 18387 2411546 2411547 1 64 Same + + 41.2483077 -5.636131e-01 0 3.206763e+02 342.7 1.397659 1.892394 0.6910637 452 Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism] H COG0452: Phosphopantothenoylcysteine synthetase/decarboxylase 1.298066 1.753192 0.7503599 756 dUTPase [Nucleotide transport and metabolism] F COG0756: dUTPase - FALSE FALSE 19 TRUE 3.1553286 3.0638607 0.45878465 0.8692997 0.8936492 N 0.6844676 0.8244159 16.63125 0.707846973 0.71574282 0.656239211 8.591674e-01 TRUE 0.5 8.591674e-01 TRUE 7.722239e-01 0.8244159 0.58320915 0.6078914 334802 18387 2411548 2411549 1 165 Same - - 0.0000000 2.118244e-01 0 2.118244e-01 NA 1.551329 2.121483 0.7680921 4705 Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown] S COG4705: Uncharacterized membrane-anchored protein conserved in bacteria 1.732054 2.310140 0.8103017 - - - hypothetical protein TRUE FALSE 19 TRUE 0.4763389 0.7220677 1.11518611 0.8692997 0.6561433 U 0.6970199 0.6784719 27.18125 0.519191906 0.36750133 0.459696258 3.855289e-01 FALSE 0.5 3.855289e-01 FALSE 3.048132e-01 0.6784719 0.28878617 0.4106349 334802 18387 2411549 2411550 1 240 Same - - 0.0000000 0.000000e+00 0 0.000000e+00 NA 1.732054 2.310140 0.8103017 - - - hypothetical protein 2.772291 3.703599 0.9625385 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG2801: Transposase and inactivated derivatives TRUE FALSE 18 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.6561433 U 0.6970199 0.5957476 30.58750 0.227674756 0.09434480 0.188488965 2.979432e-02 FALSE 0.5 2.979432e-02 FALSE 3.562024e-02 0.5957476 0.11134422 0.3273221 334802 18387 2411550 2411551 1 96 Same - - 0.0000000 0.000000e+00 0 0.000000e+00 342.7 2.772291 3.703599 0.9625385 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG2801: Transposase and inactivated derivatives 2.426263 3.228949 0.9818387 - - - COG2801: Transposase and inactivated derivatives TRUE FALSE 17 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 U 0.6970199 0.6195361 21.05625 0.476912589 0.18036720 0.418049335 1.671061e-01 FALSE 0.5 1.671061e-01 FALSE 1.509655e-01 0.6195361 0.16319661 0.3496633 334802 18387 2411552 2411553 1 301 Same + + 0.0000000 -6.785793e+01 0 -4.003579e+00 NA 1.376931 1.774223 0.7748879 1430 Uncharacterized conserved protein [Function unknown] S COG1430: Uncharacterized conserved protein 1.331590 1.764001 0.6002195 480 Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] J COG0480: Translation elongation factors (GTPases) FALSE FALSE 17 TRUE 0.4763389 0.3135467 0.12731128 0.8692997 0.6561433 U 0.6970199 0.5081931 32.68125 0.083322562 0.01756506 0.066831757 1.622507e-03 FALSE 0.5 1.622507e-03 FALSE 2.011385e-03 0.5081931 0.02169197 0.2543919 334802 18388 2411555 2411556 1 725 Same + + 0.0000000 -8.114381e+01 0 -1.651142e+01 200.0 1.850702 2.490490 0.8572113 2188 Transcriptional regulators [Transcription] K COG2188: Transcriptional regulators 1.683224 2.317254 0.8214448 372 Citrate synthase [Energy production and conversion] C COG0372: Citrate synthase - FALSE FALSE 0 TRUE 0.4763389 0.2914255 0.07511590 0.8692997 1.8147981 N 0.6844676 0.6167799 38.51250 0.005884783 0.17074017 0.004642476 1.217334e-03 FALSE 0.5 1.217334e-03 FALSE 1.103112e-03 0.6167799 0.15722353 0.3470126 334802 18388 2411556 2411557 1 582 Same + + 0.0000000 -8.114381e+01 0 -2.971407e+00 342.7 1.683224 2.317254 0.8214448 372 Citrate synthase [Energy production and conversion] C COG0372: Citrate synthase 1.467968 2.026435 0.7184835 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G COG0477: Permeases of the major facilitator superfamily - FALSE FALSE 1 TRUE 0.4763389 0.3218136 0.07511590 0.8692997 0.8936492 N 0.6844676 0.5215478 37.40625 0.009521683 0.01756506 0.007517415 1.718462e-04 FALSE 0.5 1.718462e-04 FALSE 2.131080e-04 0.5215478 0.02169197 0.2646663 334802 18388 2411557 2411558 1 643 Same + + 0.0000000 -8.242127e+01 0 1.423106e+00 342.7 1.467968 2.026435 0.7184835 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G COG0477: Permeases of the major facilitator superfamily 1.429680 1.958165 0.7116819 2200 FOG: EAL domain [Signal transduction mechanisms] T COG2200: FOG: EAL domain - FALSE FALSE 2 TRUE 0.4763389 0.8883913 0.07117759 0.8692997 0.8936492 N 0.6844676 0.5087767 38.00625 0.007296804 0.01756506 0.005758139 1.314020e-04 FALSE 0.5 1.314020e-04 FALSE 1.629543e-04 0.5087767 0.02169197 0.2548351 334802 18388 2411559 2411560 1 524 Same - - 0.0000000 -8.317356e+01 0 1.107537e+00 342.7 1.855860 2.543269 0.9176833 - - - COG0500: SAM-dependent methyltransferases 1.719150 2.358709 0.8095096 1893 Ketopantoate reductase [Coenzyme metabolism] H COG1893: Ketopantoate reductase TRUE FALSE 2 TRUE 0.4763389 0.8282116 0.06889994 0.8692997 0.8936492 U 0.6970199 0.5111407 36.93125 0.011812917 0.01756506 0.009330899 2.136835e-04 FALSE 0.5 2.136835e-04 FALSE 2.649881e-04 0.5111407 0.02169197 0.2566356 334802 18388 2411560 2411561 1 16 Same - - 0.0000000 -4.263930e-01 0 -1.061181e+00 NA 1.719150 2.358709 0.8095096 1893 Ketopantoate reductase [Coenzyme metabolism] H COG1893: Ketopantoate reductase 1.589174 2.219200 0.8446473 4539 Predicted membrane protein [Function unknown] S COG4539: Predicted membrane protein TRUE FALSE 1 TRUE 0.4763389 0.3513672 0.46783806 0.8692997 0.6561433 U 0.6970199 0.5714190 9.14375 0.846773536 0.01756506 0.813231425 8.992048e-02 FALSE 0.5 8.992048e-02 FALSE 2.525012e-01 0.5714190 0.05760403 0.3056668 334802 18388 2411562 2411563 1 529 Same + + 0.0000000 -1.686291e+00 0 -1.320505e-01 342.7 1.741822 2.405419 0.8366892 664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] T COG0664: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 1.408832 1.942307 0.6904394 2059 Chromate transport protein ChrA [Inorganic ion transport and metabolism] P COG2059: Chromate transport protein ChrA - FALSE FALSE 1 TRUE 0.4763389 0.3795506 0.40476552 0.8692997 0.8936492 N 0.6844676 0.5820455 36.98750 0.011513385 0.04160499 0.009093722 5.053747e-04 FALSE 0.5 5.053747e-04 FALSE 1.027843e-03 0.5820455 0.08116668 0.3149834 334802 18388 2411564 2411565 1 96 Same - - 0.0000000 0.000000e+00 0 0.000000e+00 342.7 2.772291 3.701254 0.9625385 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG2801: Transposase and inactivated derivatives 2.426263 3.228949 0.9818387 - - - COG2801: Transposase and inactivated derivatives TRUE FALSE 1 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 U 0.6970199 0.6195361 21.05625 0.476912589 0.18036720 0.418049335 1.671061e-01 FALSE 0.5 1.671061e-01 FALSE 1.509655e-01 0.6195361 0.16319661 0.3496633 334802 18388 2411565 2411566 1 66 Same - - 0.0000000 0.000000e+00 0 0.000000e+00 NA 2.426263 3.228949 0.9818387 - - - COG2801: Transposase and inactivated derivatives 1.673501 2.244111 0.7404341 3666 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG3666: Transposase and inactivated derivatives TRUE FALSE 0 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.6561433 U 0.6970199 0.5957476 16.93750 0.691754869 0.09434480 0.638755203 1.894840e-01 FALSE 0.5 1.894840e-01 FALSE 2.194718e-01 0.5957476 0.11134422 0.3273221 334802 18388 2411566 2411567 1 161 Same - - 0.0000000 0.000000e+00 0 0.000000e+00 NA 1.673501 2.244111 0.7404341 3666 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG3666: Transposase and inactivated derivatives 1.412921 1.818774 0.6846056 605 Superoxide dismutase [Inorganic ion transport and metabolism] P COG0605: Superoxide dismutase - TRUE FALSE -1 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.6561433 N 0.6844676 0.5942845 26.92500 0.521102010 0.08882916 0.461597617 9.590666e-02 FALSE 0.5 9.590666e-02 FALSE 1.165515e-01 0.5942845 0.10813275 0.3259866 334802 18388 2411567 2411568 1 197 Same - - 1.7346011 1.972613e+01 0 -5.075798e+01 342.7 1.412921 1.818774 0.6846056 605 Superoxide dismutase [Inorganic ion transport and metabolism] P COG0605: Superoxide dismutase 1.549820 2.109589 0.7564416 1570 Exonuclease VII, large subunit [DNA replication, recombination, and repair] L COG1570: Exonuclease VII, large subunit - TRUE FALSE -2 TRUE 0.9207019 0.2920547 2.47331580 0.8692997 0.8936492 N 0.6844676 0.8946352 28.81875 0.403376211 0.84281099 0.347558620 7.837876e-01 TRUE 0.5 7.837876e-01 TRUE 6.314465e-01 0.8946352 0.71704371 0.7370880 334802 18388 2411569 2411570 1 -19 Same + + 22.4105084 1.885882e+01 0 1.437249e+02 342.7 1.634527 2.235930 0.7886681 1663 Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane] M COG1663: Tetraacyldisaccharide-1-P 4'-kinase 1.734058 2.339098 0.9650337 2835 Uncharacterized conserved protein [Function unknown] S COG2835: Uncharacterized conserved protein FALSE FALSE -2 TRUE 2.7066444 2.5588656 2.43243361 0.8692997 0.8936492 U 0.6970199 0.9456511 0.53125 0.802393502 0.92329340 0.761868442 9.799502e-01 TRUE 0.5 9.799502e-01 TRUE 9.458246e-01 0.9456511 0.81130434 0.8517444 334802 18388 2411570 2411571 1 174 Same + + 18.2208536 1.885882e+01 0 2.217667e+02 342.7 1.734058 2.339098 0.9650337 2835 Uncharacterized conserved protein [Function unknown] S COG2835: Uncharacterized conserved protein 1.562536 2.136189 0.7798370 1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane] M COG1212: CMP-2-keto-3-deoxyoctulosonic acid synthetase FALSE FALSE -1 TRUE 2.5571733 2.7897374 2.43243361 0.8692997 0.8936492 U 0.6970199 0.9403958 27.61250 0.506292162 0.91540609 0.446900761 9.173349e-01 TRUE 0.5 9.173349e-01 TRUE 8.056775e-01 0.9403958 0.80170648 0.8389552 334802 18388 2411571 2411572 1 215 Same + + 2.8977519 1.344659e+01 0 -2.973360e+01 342.7 1.562536 2.136189 0.7798370 1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane] M COG1212: CMP-2-keto-3-deoxyoctulosonic acid synthetase 1.353366 1.774596 0.6694812 563 Adenylate kinase and related kinases [Nucleotide transport and metabolism] F COG0563: Adenylate kinase and related kinases - FALSE FALSE 0 TRUE 1.2534948 0.2909220 2.25838329 0.8692997 0.8936492 N 0.6844676 0.8957079 29.65000 0.312554182 0.84459771 0.263748448 7.119017e-01 TRUE 0.5 7.119017e-01 TRUE 5.378162e-01 0.8957079 0.71905108 0.7392973 334802 18388 2411572 2411573 1 115 Same + + 0.0000000 0.000000e+00 0 0.000000e+00 342.7 1.353366 1.774596 0.6694812 563 Adenylate kinase and related kinases [Nucleotide transport and metabolism] F COG0563: Adenylate kinase and related kinases 1.895074 2.505488 0.7624251 3666 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG3666: Transposase and inactivated derivatives - FALSE FALSE 1 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 N 0.6844676 0.6181039 23.48750 0.463215530 0.17537546 0.404734781 1.550666e-01 FALSE 0.5 1.550666e-01 FALSE 1.412516e-01 0.6181039 0.16009397 0.3482838 334802 18388 2411575 2411576 1 -3 Same + + 68.9269499 1.724145e+01 0 3.751849e+02 NA 2.402025 3.240655 0.9466667 2127 Uncharacterized conserved protein [Function unknown] S COG2127: Uncharacterized conserved protein 1.368655 1.824499 0.6181156 542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] O COG0542: ATPases with chaperone activity, ATP-binding subunit FALSE FALSE 2 TRUE 3.4107982 3.1502664 2.36881539 0.8692997 0.6561433 U 0.6970199 0.9537714 3.53125 0.841536177 0.93530970 0.807108744 9.871435e-01 TRUE 0.5 9.871435e-01 TRUE 9.618683e-01 0.9537714 0.82608472 0.8719962 334802 18388 2411576 2411577 1 178 Same + + 0.0000000 2.801872e-02 0 2.801872e-02 342.7 1.368655 1.824499 0.6181156 542 ATPases with chaperone activity, ATP-binding subunit [Posttranslational modification, protein turnover, chaperones] O COG0542: ATPases with chaperone activity, ATP-binding subunit 1.564534 2.111275 0.8043080 - - - COG1113: Gamma-aminobutyrate permease and related permeases FALSE FALSE 3 TRUE 0.4763389 0.4973048 0.77362743 0.8692997 0.8936492 U 0.6970199 0.6472099 27.80000 0.495803938 0.27248202 0.436554964 2.691674e-01 FALSE 0.5 2.691674e-01 FALSE 2.197794e-01 0.6472099 0.22267109 0.3772348 334802 18388 2411578 2411579 1 96 Same - - 0.0000000 0.000000e+00 0 0.000000e+00 342.7 2.772291 3.701254 0.9625385 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L COG2801: Transposase and inactivated derivatives 2.426263 3.228949 0.9818387 - - - COG2801: Transposase and inactivated derivatives TRUE FALSE 3 TRUE 0.4763389 0.4320672 0.60901007 0.8692997 0.8936492 U 0.6970199 0.6195361 21.05625 0.476912589 0.18036720 0.418049335 1.671061e-01 FALSE 0.5 1.671061e-01 FALSE 1.509655e-01 0.6195361 0.16319661 0.3496633 334802 18388 2411581 2411582 1 9 Same - - 0.0000000 1.310863e+00 0 1.310863e+00 NA 1.867086 2.525737 0.8879355 - - - COG0454: Histone acetyltransferase HPA2 and related acetyltransferases 1.458301 1.963371 0.7159373 156 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism] H COG0156: 7-keto-8-aminopelargonate synthetase and related enzymes TRUE FALSE 2 TRUE 0.4763389 0.8579766 1.35392134 0.8692997 0.6561433 U 0.6970199 0.7142556 7.78125 0.852139790 0.46605488 0.819522010 8.341727e-01 TRUE 0.5 8.341727e-01 TRUE 7.666643e-01 0.7142556 0.36310512 0.4521578 334802 18388 2411582 2411583 1 65 Same - - 0.0000000 1.452514e+00 0 1.452514e+00 342.7 1.458301 1.963371 0.7159373 156 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism] H COG0156: 7-keto-8-aminopelargonate synthetase and related enzymes 1.782240 2.453005 0.8529259 774 UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] M COG0774: UDP-3-O-acyl-N-acetylglucosamine deacetylase - TRUE FALSE 1 TR