Taxon Scaffold Gene1 Gene2 Consecutive Sep Code Strand1 Strand2 GNScore GNWithin GNAll GNMinus GOScore CAI CAI.Alm CBI COG COGanno COGfun Description nCAI nCAI.Alm nCBI nCOG nCOGanno nCOGfun nDescription COGsim forward forwardplus sumBias same bbfGNScore bbfGNMinus bbfGNWithin bbfGNAll bbfGOScore COGsimClass cfCOG pSame groupIndexD pSameD pOpLogistic pOpDistance pOp1 bOp1 pCAI pOp bOp pOp2 pSame pOpLogisticLike pOpLogisticM 351607 4476 1953679 1953680 1 404 Same + + 149.644478 -10.17140054 0 1.060639e+03 146.7 1.823952 3.105046 1.0113415 593 ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] L chromosomal replication initiator protein DnaA 1.936266 3.427610 1.1011969 592 DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] L DNA polymerase III, beta subunit L TRUE TRUE 1 TRUE 4.246295 4.1653251 0.5800496 1.013258 1.0237197 Y 2.6122461 0.9697851 31.96 0.10219876 0.9651942 0.1432083 0.75942249 TRUE 0.5 0.75942249 TRUE 0.38764068 0.9697851 0.8475856 0.9447242 351607 4476 1953680 1953681 1 13 Same + + 129.252594 10.68142318 0 9.593792e+02 146.7 1.936266 3.427610 1.1011969 592 DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] L DNA polymerase III, beta subunit 1.790198 3.135031 1.0523910 1195 Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair] L DNA replication and repair protein RecF L TRUE TRUE 2 TRUE 4.260626 4.1030587 2.1794797 1.013258 1.0237197 Y 2.6122461 0.9846787 13.45 0.68705227 0.9826177 0.7632369 0.99200682 TRUE 0.5 0.99200682 TRUE 0.94036425 0.9846787 0.8777869 0.9716092 351607 4476 1953681 1953682 1 -10 Same + + 1.791759 30.80008668 0 3.421112e+01 NA 1.790198 3.135031 1.0523910 1195 Recombinational DNA repair ATPase (RecF pathway) [DNA replication, recombination, and repair] L DNA replication and repair protein RecF 1.910944 3.318839 1.0294992 5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives [General function prediction only] R protein of unknown function DUF721 TRUE TRUE 3 TRUE 2.380119 2.5324922 3.0208304 1.013258 0.8255205 U 0.7711970 0.9426407 0.76 0.87579553 0.9320228 0.9119225 0.98976230 TRUE 0.5 0.98976230 TRUE 0.96432583 0.9426407 0.7931139 0.8974466 351607 4476 1953682 1953683 1 248 Same + + 1.791759 17.08419474 0 3.065207e+01 NA 1.910944 3.318839 1.0294992 5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives [General function prediction only] R protein of unknown function DUF721 1.539542 2.557470 0.9155547 187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] L DNA gyrase, B subunit TRUE TRUE 4 TRUE 2.380119 2.4276892 2.3947122 1.013258 0.8255205 U 0.7711970 0.9237598 29.67 0.13897855 0.9078000 0.1915971 0.61378827 TRUE 0.5 0.61378827 TRUE 0.33296565 0.9237598 0.7556539 0.8658070 351607 4476 1953683 1953684 1 39 Same + + 80.685732 28.87678959 0 3.228934e+02 5.0 1.539542 2.557470 0.9155547 187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] L DNA gyrase, B subunit 1.579025 2.661069 0.9400008 188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair] L DNA gyrase, A subunit L TRUE TRUE 5 TRUE 4.259444 3.6092611 2.8787966 1.013258 3.1692029 Y 2.6122461 0.9896202 17.36 0.61244655 0.9882828 0.6988320 0.99255335 TRUE 0.5 0.99255335 TRUE 0.92598875 0.9896202 0.8878571 0.9806833 351607 4476 1953684 1953685 1 95 Same + + 2.197225 3.44982875 0 8.855879e+00 NA 1.579025 2.661069 0.9400008 188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair] L DNA gyrase, A subunit 1.640543 2.847411 1.0386724 - - - hypothetical protein TRUE TRUE 6 TRUE 2.503465 1.7506052 1.7796955 1.013258 0.8255205 U 0.7711970 0.8899880 22.72 0.38398461 0.8619100 0.4778807 0.79552813 TRUE 0.5 0.79552813 TRUE 0.58058184 0.8899880 0.6895105 0.8115995 351607 4476 1953685 1377539 1 71 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.640543 2.847411 1.0386724 - - - hypothetical protein NA NA NA TRUE TRUE 7 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 20.55 0.47761939 0.3364722 0.5731102 0.31677387 FALSE 0.5 0.31677387 FALSE 0.19563558 0.6273706 0.2101176 0.4727201 351607 4476 1377539 1377540 1 188 Same + + 0.000000 0.00000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 8 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 27.80 0.18094010 0.3364722 0.2449265 0.10073843 FALSE 0.5 0.10073843 FALSE 0.05550341 0.6273706 0.2101176 0.4727201 351607 4476 1377540 1953686 1 233 Same + + 0.000000 0.00000000 0 0.000000e+00 NA NA NA NA 2.041291 3.744054 1.1360960 - - - hypothetical protein TRUE TRUE 9 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 29.26 0.14712237 0.3364722 0.2021006 0.08043829 FALSE 0.5 0.08043829 FALSE 0.04387400 0.6273706 0.2101176 0.4727201 351607 4476 1953686 1953687 1 29 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 2.041291 3.744054 1.1360960 - - - hypothetical protein 1.969001 3.604267 1.1627391 - - - hypothetical protein TRUE TRUE 10 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 16.23 0.65397198 0.3364722 0.7351048 0.48937394 FALSE 0.5 0.48937394 FALSE 0.33455121 0.6273706 0.2101176 0.4727201 351607 4476 1953687 1953688 1 -3 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.969001 3.604267 1.1627391 - - - hypothetical protein 2.317113 4.169127 1.1053208 - - - hypothetical protein TRUE TRUE 11 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 4.46 0.83976334 0.3364722 0.8849946 0.72659456 TRUE 0.5 0.72659456 TRUE 0.58230716 0.6273706 0.2101176 0.4727201 351607 4476 1953690 1953691 1 4 Same + + 0.000000 5.46188453 0 7.563114e+00 NA 1.687417 2.823894 1.0109800 652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] O Peptidylprolyl isomerase 1.641472 2.863899 1.0028723 705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) [General function prediction only] R Rhomboid family protein TRUE TRUE 12 TRUE 0.614643 1.6938717 1.9350490 1.013258 0.8255205 U 0.7711970 0.7919889 10.55 0.62407175 0.7065909 0.7090968 0.79991306 TRUE 0.5 0.79991306 TRUE 0.62744606 0.7919889 0.5036021 0.6696881 351607 4476 1953693 1953694 1 -3 Same + + 0.000000 2.33838281 0 2.338383e+00 NA 1.762263 3.087409 1.0543256 3879 Uncharacterized protein conserved in bacteria [Function unknown] S protein of unknown function DUF881 1.572960 2.670485 0.9546906 3764 Sortase (surface protein transpeptidase) [Cell envelope biogenesis, outer membrane] M sortase family protein TRUE TRUE 13 TRUE 0.614643 1.3912576 1.6331651 1.013258 0.8255205 U 0.7711970 0.7541677 4.46 0.83976334 0.6358526 0.8849946 0.90148869 TRUE 0.5 0.90148869 TRUE 0.80083942 0.7541677 0.4341548 0.6202911 351607 4476 1953694 1953695 1 5 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.572960 2.670485 0.9546906 3764 Sortase (surface protein transpeptidase) [Cell envelope biogenesis, outer membrane] M sortase family protein 1.592811 2.918217 1.0955212 - - - hypothetical protein TRUE TRUE 14 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 10.96 0.64096174 0.3364722 0.7238570 0.47514187 FALSE 0.5 0.47514187 FALSE 0.32198255 0.6273706 0.2101176 0.4727201 351607 4476 1953695 1953696 1 83 Same + + 0.000000 0.89381788 0 8.938179e-01 NA 1.592811 2.918217 1.0955212 - - - hypothetical protein 1.784098 2.997657 0.9927317 512 Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] EH glutamine amidotransferase of anthranilate synthase TRUE TRUE 15 TRUE 0.614643 1.2500799 1.4150033 1.013258 0.8255205 U 0.7711970 0.7283176 21.79 0.42499813 0.5832775 0.5204500 0.50848768 TRUE 0.5 0.50848768 TRUE 0.31852677 0.7283176 0.3873982 0.5880529 351607 4476 1953697 1953698 1 -3 Same - - 13.002498 -6.64091205 0 9.174552e+00 7.0 1.715233 2.990888 1.0381372 515 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] RTKL serine/threonine protein kinase 1.618106 2.799763 0.9753261 768 Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane] M Peptidoglycan glycosyltransferase - FALSE TRUE 15 TRUE 3.573594 1.7687346 0.5111898 1.013258 3.0882322 N 0.8991512 0.9055575 4.46 0.83976334 0.8834915 0.8849946 0.97545476 TRUE 0.5 0.97545476 TRUE 0.93087929 0.9055575 0.7198680 0.8362215 351607 4476 1953698 1953699 1 -3 Same - - 22.343867 41.86925296 0 9.533871e+01 146.7 1.618106 2.799763 0.9753261 768 Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane] M Peptidoglycan glycosyltransferase 1.559663 2.765289 0.9948066 772 Bacterial cell division membrane protein [Cell division and chromosome partitioning] D cell cycle protein - FALSE TRUE 14 TRUE 3.871819 3.0261803 3.5889568 1.013258 1.0237197 N 0.8991512 0.9796880 4.46 0.83976334 0.9768383 0.8849946 0.99549606 TRUE 0.5 0.99549606 TRUE 0.97171512 0.9796880 0.8676418 0.9625234 351607 4476 1953699 1953700 1 -3 Same - - 2.415914 33.53547177 0 3.595139e+01 146.7 1.559663 2.765289 0.9948066 772 Bacterial cell division membrane protein [Cell division and chromosome partitioning] D cell cycle protein 1.729259 3.020198 1.0263718 631 Serine/threonine protein phosphatase [Signal transduction mechanisms] T protein serine/threonine phosphatases - FALSE TRUE 13 TRUE 2.631244 2.5841151 3.1541695 1.013258 1.0237197 N 0.8991512 0.9540624 4.46 0.83976334 0.9462105 0.8849946 0.98926928 TRUE 0.5 0.98926928 TRUE 0.95873423 0.9540624 0.8159450 0.9170759 351607 4476 1953700 1953701 1 47 Same - - 2.415914 33.53547177 0 3.595139e+01 NA 1.729259 3.020198 1.0263718 631 Serine/threonine protein phosphatase [Signal transduction mechanisms] T protein serine/threonine phosphatases 1.981085 3.443350 1.0702510 - - - FHA domain containing protein FALSE TRUE 12 TRUE 2.631244 2.5841151 3.1541695 1.013258 0.8255205 U 0.7711970 0.9516406 18.27 0.56290172 0.9432307 0.6540934 0.95535164 TRUE 0.5 0.95535164 TRUE 0.84684620 0.9516406 0.8110932 0.9128823 351607 4476 1953701 1953702 1 9 Same - - 20.783219 16.50774176 0 4.519419e+01 NA 1.981085 3.443350 1.0702510 - - - FHA domain containing protein 1.556069 2.698307 0.9797614 1716 FOG: FHA domain [Signal transduction mechanisms] T FHA domain containing protein FALSE TRUE 11 TRUE 3.833542 2.7233594 2.3854628 1.013258 0.8255205 U 0.7711970 0.9605377 12.11 0.68617927 0.9541041 0.7625030 0.97847362 TRUE 0.5 0.97847362 TRUE 0.91376471 0.9605377 0.8289461 0.9283734 351607 4476 1953703 1953704 1 29 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.650978 2.808781 0.9649633 - - - Kelch repeat-containing protein 2.138939 3.870524 1.1763426 2217 Cation transport ATPase [Inorganic ion transport and metabolism] P heavy metal translocating P-type ATPase FALSE TRUE 10 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 16.23 0.65397198 0.3364722 0.7351048 0.48937394 FALSE 0.5 0.48937394 FALSE 0.33455121 0.6273706 0.2101176 0.4727201 351607 4476 1953704 1953705 1 597 Same - - 0.000000 -0.46575734 0 -4.960827e-01 NA 2.138939 3.870524 1.1763426 2217 Cation transport ATPase [Inorganic ion transport and metabolism] P heavy metal translocating P-type ATPase 1.810737 3.287813 1.0895815 4315 Uncharacterized protein conserved in bacteria [Function unknown] S Secreted repeat of unknown function FALSE TRUE 9 TRUE 0.614643 0.3432017 0.4238468 1.013258 0.8255205 U 0.7711970 0.5746115 32.82 0.09150134 0.1729770 0.1288343 0.02063100 FALSE 0.5 0.02063100 FALSE 0.01363542 0.5746115 0.1206897 0.4183648 351607 4476 1953705 1953706 1 192 Same - - 0.000000 -0.80511142 0 -8.051114e-01 NA 1.810737 3.287813 1.0895815 4315 Uncharacterized protein conserved in bacteria [Function unknown] S Secreted repeat of unknown function 1.620777 2.742809 0.9691295 - - - protein of unknown function DUF75 FALSE TRUE 8 TRUE 0.614643 0.3380438 0.4045566 1.013258 0.8255205 U 0.7711970 0.5721853 27.97 0.17659028 0.1647333 0.2394882 0.04058034 FALSE 0.5 0.04058034 FALSE 0.02753508 0.5721853 0.1166286 0.4159532 351607 4476 1953708 1953709 1 31 Same - - 0.000000 -4.39075949 0 -7.725943e+00 146.7 1.617953 2.688743 0.9509601 388 Predicted amidohydrolase [General function prediction only] R Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1.804221 3.121767 1.0428247 508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] C catalytic domain of components of various dehydrogenase complexes FALSE TRUE 7 TRUE 0.614643 0.4677080 0.4645986 1.013258 1.0237197 U 0.7711970 0.5922431 16.52 0.64701211 0.2308563 0.7291009 0.35490411 FALSE 0.5 0.35490411 FALSE 0.24489444 0.5922431 0.1503368 0.4361172 351607 4476 1953709 1953710 1 25 Same - - 9.703083 13.69637634 0 1.012460e+02 146.7 1.804221 3.121767 1.0428247 508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] C catalytic domain of components of various dehydrogenase complexes 1.505614 2.534241 0.9225156 22 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] C Transketolase, central region C FALSE TRUE 6 TRUE 3.439838 3.0520535 2.2913278 1.013258 1.0237197 Y 2.6122461 0.9727224 15.59 0.66629820 0.9686727 0.7456649 0.98406112 TRUE 0.5 0.98406112 TRUE 0.92085371 0.9727224 0.8535242 0.9499722 351607 4476 1953710 1953711 1 1 Same - - 79.413425 31.25985816 0 6.146506e+02 146.7 1.505614 2.534241 0.9225156 22 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] C Transketolase, central region 1.569907 2.622142 0.9537849 1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] C Pyruvate dehydrogenase (acetyl-transferring) C FALSE TRUE 5 TRUE 4.256985 3.9143093 3.0497526 1.013258 1.0237197 Y 2.6122461 0.9889429 8.94 0.63892674 0.9875097 0.7220881 0.99290285 TRUE 0.5 0.99290285 TRUE 0.93251268 0.9889429 0.8864754 0.9794350 351607 4476 1953711 1953712 1 296 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.569907 2.622142 0.9537849 1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] C Pyruvate dehydrogenase (acetyl-transferring) 2.016949 3.487089 1.0902724 - - - hypothetical protein FALSE TRUE 4 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 30.78 0.11946221 0.3364722 0.1661173 0.06436905 FALSE 0.5 0.06436905 FALSE 0.03483255 0.6273706 0.2101176 0.4727201 351607 4476 1953712 1953713 1 292 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 2.016949 3.487089 1.0902724 - - - hypothetical protein 1.630027 2.793185 0.9521779 79 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism] E histidinol-phosphate aminotransferase FALSE TRUE 3 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 30.66 0.12140636 0.3364722 0.1686753 0.06548328 FALSE 0.5 0.06548328 FALSE 0.03545488 0.6273706 0.2101176 0.4727201 351607 4476 1377570 1377571 1 154 Same + + 0.000000 0.00000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 3 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 26.34 0.22214143 0.3364722 0.2954424 0.12649778 FALSE 0.5 0.12649778 FALSE 0.07060407 0.6273706 0.2101176 0.4727201 351607 4476 1377571 1953714 1 169 Same + + 0.000000 0.00000000 0 0.000000e+00 NA NA NA NA 2.111369 3.600342 1.0732720 1715 Restriction endonuclease [Defense mechanisms] V restriction endonuclease TRUE TRUE 4 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 27.26 0.19549332 0.3364722 0.2629738 0.10970495 FALSE 0.5 0.10970495 FALSE 0.06071549 0.6273706 0.2101176 0.4727201 351607 4476 1953715 1953716 1 130 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 2.389929 4.136474 1.0947596 - - - hypothetical protein 3.068663 5.247212 1.1993754 - - - hypothetical protein FALSE TRUE 4 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 25.13 0.26014786 0.3364722 0.3405002 0.15132383 FALSE 0.5 0.15132383 FALSE 0.08553476 0.6273706 0.2101176 0.4727201 351607 4476 1953719 1953720 1 142 Same + + 0.000000 0.00000000 0 0.000000e+00 146.7 1.657649 2.935465 1.0423397 38 Chloride channel protein EriC [Inorganic ion transport and metabolism] P Cl- channel, voltage-gated family protein 1.727688 2.943700 1.0131971 1765 Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones] O OsmC family protein - TRUE TRUE 4 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 N 0.8991512 0.6398865 25.68 0.24191354 0.3713011 0.3190627 0.15857674 FALSE 0.5 0.15857674 FALSE 0.08776535 0.6398865 0.2316508 0.4861761 351607 4476 1953720 1953721 1 131 Same + + 0.000000 0.00000000 0 0.000000e+00 146.7 1.727688 2.943700 1.0131971 1765 Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones] O OsmC family protein 1.627067 2.779502 0.9904197 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] R alpha/beta hydrolase fold TRUE TRUE 5 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 U 0.7711970 0.6321473 25.20 0.25768923 0.3499276 0.3376287 0.15744388 FALSE 0.5 0.15744388 FALSE 0.08838708 0.6321473 0.2183213 0.4778293 351607 4476 1953721 1953722 1 107 Same + + 0.000000 0.00000000 0 0.000000e+00 146.7 1.627067 2.779502 0.9904197 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] R alpha/beta hydrolase fold 2.102323 3.871880 1.1215740 1846 Transcriptional regulators [Transcription] K transcriptional regulator, MarR family TRUE TRUE 6 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 U 0.7711970 0.6321473 23.65 0.33369037 0.3499276 0.4237479 0.21233653 FALSE 0.5 0.21233653 FALSE 0.12270966 0.6321473 0.2183213 0.4778293 351607 4476 1953722 1953723 1 -16 Same + + 0.000000 0.00000000 0 0.000000e+00 146.7 2.102323 3.871880 1.1215740 1846 Transcriptional regulators [Transcription] K transcriptional regulator, MarR family 1.652219 2.971757 1.0329936 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 - TRUE TRUE 7 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 N 0.8991512 0.6398865 0.31 0.87677880 0.3713011 0.9126483 0.80777772 TRUE 0.5 0.80777772 TRUE 0.68206115 0.6398865 0.2316508 0.4861761 351607 4476 1953723 1953724 1 115 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.652219 2.971757 1.0329936 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 1.715166 2.943482 0.9954907 - - - hypothetical protein TRUE TRUE 8 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 24.15 0.30452407 0.3364722 0.3913331 0.18169559 FALSE 0.5 0.18169559 FALSE 0.10432536 0.6273706 0.2101176 0.4727201 351607 4476 1953726 1953727 1 121 Same + + 0.000000 -2.36195173 0 -2.831893e+00 146.7 1.494814 2.437757 0.8620738 4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only] MR Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein 1.668500 2.905990 1.0211068 4097 Predicted ferric reductase [Inorganic ion transport and metabolism] P oxidoreductase FAD/NAD(P)-binding domain protein - TRUE TRUE 9 TRUE 0.614643 0.3706996 0.4180532 1.013258 1.0237197 N 0.8991512 0.5889402 24.45 0.28855427 0.2202775 0.3732541 0.10280257 FALSE 0.5 0.10280257 FALSE 0.06424314 0.5889402 0.1447650 0.4327609 351607 4476 1953727 1953728 1 11 Same + + 1.945910 3.05842123 0 6.950242e+00 146.7 1.668500 2.905990 1.0211068 4097 Predicted ferric reductase [Inorganic ion transport and metabolism] P oxidoreductase FAD/NAD(P)-binding domain protein 1.852252 3.340611 1.1241325 - - - FMN-binding domain protein TRUE TRUE 10 TRUE 2.410339 1.6732741 1.7397703 1.013258 1.0237197 U 0.7711970 0.8841727 12.82 0.68951817 0.8536543 0.7653076 0.92833713 TRUE 0.5 0.92833713 TRUE 0.82397605 0.8841727 0.6782309 0.8025598 351607 4476 1953728 1953729 1 9 Same + + 1.945910 2.51555628 0 6.407377e+00 146.7 1.852252 3.340611 1.1241325 - - - FMN-binding domain protein 1.721298 3.015345 1.0160390 1477 Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism] H ApbE family lipoprotein TRUE TRUE 11 TRUE 2.410339 1.6356398 1.6474295 1.013258 1.0237197 U 0.7711970 0.8788439 12.11 0.68617927 0.8459933 0.7625030 0.92314264 TRUE 0.5 0.92314264 TRUE 0.81474220 0.8788439 0.6679231 0.7943497 351607 4476 1953730 1953731 1 163 Same - - 0.000000 -9.23528039 0 -1.543018e+01 146.7 1.364294 2.246665 0.8087681 422 Thiamine biosynthesis protein ThiC [Coenzyme metabolism] H thiamine biosynthesis protein ThiC 1.517705 2.542022 0.9142953 598 Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] P Mg2+ transporter protein, CorA family protein - FALSE TRUE 11 TRUE 0.614643 0.5491371 0.5645986 1.013258 1.0237197 N 0.8991512 0.6161108 26.89 0.20611154 0.3039294 0.2759999 0.10181845 FALSE 0.5 0.10181845 FALSE 0.05770273 0.6161108 0.1908509 0.4608035 351607 4476 1953731 1953732 1 4 Same - - 0.000000 -3.79523075 0 -3.795231e+00 NA 1.517705 2.542022 0.9142953 598 Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] P Mg2+ transporter protein, CorA family protein 1.611350 2.784576 0.9976663 - - - hypothetical protein FALSE TRUE 10 TRUE 0.614643 0.3859220 0.4500486 1.013258 0.8255205 U 0.7711970 0.5802853 10.55 0.62407175 0.1919862 0.7090968 0.28286613 FALSE 0.5 0.28286613 FALSE 0.19904276 0.5802853 0.1302041 0.4240336 351607 4476 1953732 1953733 1 -3 Same - - 0.000000 12.23543953 0 1.223544e+01 NA 1.611350 2.784576 0.9976663 - - - hypothetical protein 1.801298 3.099437 1.0108942 - - - hypothetical protein FALSE TRUE 9 TRUE 0.614643 1.8672091 2.2290388 1.013258 0.8255205 U 0.7711970 0.8196623 4.46 0.83976334 0.7542137 0.8849946 0.94145780 TRUE 0.5 0.94145780 TRUE 0.86740766 0.8196623 0.5552143 0.7076257 351607 4476 1953733 1953734 1 2 Same - - 0.000000 -3.39064245 0 -3.390642e+00 NA 1.801298 3.099437 1.0108942 - - - hypothetical protein 1.558129 2.673711 0.9442592 2208 Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] TK response regulator receiver modulated serine phosphatase FALSE TRUE 8 TRUE 0.614643 0.3820597 0.4444426 1.013258 0.8255205 U 0.7711970 0.5794254 9.64 0.62396977 0.1891291 0.7090071 0.27903629 FALSE 0.5 0.27903629 FALSE 0.19694004 0.5794254 0.1287605 0.4231718 351607 4476 1953735 1953736 1 -3 Same + + 0.000000 25.23431721 0 2.523432e+01 NA 1.629950 2.829221 0.9805485 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K RNA polymerase, sigma-24 subunit, ECF subfamily 1.712781 3.137184 1.0866034 - - - putative transmembrane anti-sigma factor TRUE TRUE 8 TRUE 0.614643 2.2760326 2.6407452 1.013258 0.8255205 U 0.7711970 0.8590674 4.46 0.83976334 0.8167304 0.8849946 0.95894098 TRUE 0.5 0.95894098 TRUE 0.89918999 0.8590674 0.6299001 0.7644772 351607 4476 1953736 1953737 1 446 Same + + 0.000000 -7.67764533 0 -7.771171e+00 NA 1.712781 3.137184 1.0866034 - - - putative transmembrane anti-sigma factor 1.416469 2.326798 0.8511212 2897 Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] P Thiosulfate sulfurtransferase TRUE TRUE 9 TRUE 0.614643 0.4705427 0.5258175 1.013258 0.8255205 U 0.7711970 0.5940008 32.32 0.09753998 0.2364380 0.1369652 0.03238402 FALSE 0.5 0.03238402 FALSE 0.01919414 0.5940008 0.1533055 0.4379093 351607 4476 1953737 1953738 1 0 Same + + 0.000000 26.09464253 0 2.609464e+01 NA 1.416469 2.326798 0.8511212 2897 Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] P Thiosulfate sulfurtransferase 1.725266 2.933575 1.0823399 - - - protein of unknown function DUF1416 TRUE TRUE 10 TRUE 0.614643 2.2973008 2.6939626 1.013258 0.8255205 U 0.7711970 0.8625765 7.97 0.67109322 0.8220207 0.7497479 0.90406511 TRUE 0.5 0.90406511 TRUE 0.78140253 0.8625765 0.6366202 0.7697101 351607 4476 1953738 1953739 1 470 Same + + 0.000000 -3.03769420 0 -3.037694e+00 NA 1.725266 2.933575 1.0823399 - - - protein of unknown function DUF1416 1.636177 2.854797 1.0284429 735 Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] P ferric uptake regulator, Fur family TRUE TRUE 11 TRUE 0.614643 0.3744292 0.4346004 1.013258 0.8255205 U 0.7711970 0.5778577 32.48 0.09555418 0.1838987 0.1342962 0.02325325 FALSE 0.5 0.02325325 FALSE 0.01501991 0.5778577 0.1261303 0.4216031 351607 4476 1953739 1953740 1 -3 Same + + 0.000000 6.01593177 0 4.104668e+00 146.7 1.636177 2.854797 1.0284429 735 Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism] P ferric uptake regulator, Fur family 1.727817 2.948619 0.9999163 354 Predicted aminomethyltransferase related to GcvT [General function prediction only] R glycine cleavage T protein (aminomethyl transferase) TRUE TRUE 12 TRUE 0.614643 1.5140750 1.9645109 1.013258 1.0237197 U 0.7711970 0.7893802 4.46 0.83976334 0.7019295 0.8849946 0.92504616 TRUE 0.5 0.92504616 TRUE 0.83910125 0.7893802 0.4987720 0.6661921 351607 4476 1953741 1953742 1 111 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.844643 3.228228 1.0829659 1490 D-Tyr-tRNAtyr deacylase [Translation, ribosomal structure and biogenesis] J D-tyrosyl-tRNA(Tyr) deacylase 1.846407 3.241798 1.0858369 - - - hypothetical protein FALSE TRUE 12 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 23.91 0.31829062 0.3364722 0.4067290 0.19143790 FALSE 0.5 0.19143790 FALSE 0.11047926 0.6273706 0.2101176 0.4727201 351607 4476 1953745 1953746 1 -13 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.598670 2.865311 1.0151445 1396 Predicted transcriptional regulators [Transcription] K transcriptional regulator, XRE family 1.741978 3.095569 1.0468139 - - - hypothetical protein TRUE TRUE 12 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 0.48 0.87647901 0.3364722 0.9124270 0.78252573 TRUE 0.5 0.78252573 TRUE 0.65368689 0.6273706 0.2101176 0.4727201 351607 4476 1953746 1953747 1 10 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.741978 3.095569 1.0468139 - - - hypothetical protein 1.802846 3.118908 1.0437094 667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] C aldo/keto reductase TRUE TRUE 13 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 12.45 0.68882816 0.3364722 0.7647285 0.52886565 TRUE 0.5 0.52886565 TRUE 0.37061720 0.6273706 0.2101176 0.4727201 351607 4476 1953747 1953748 1 8 Same + + 0.000000 -0.67722590 0 -6.772259e-01 NA 1.802846 3.118908 1.0437094 667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] C aldo/keto reductase 1.691298 3.034085 1.1079168 - - - hypothetical protein TRUE TRUE 14 TRUE 0.614643 0.3386337 0.4066009 1.013258 0.8255205 U 0.7711970 0.5724455 11.83 0.68019111 0.1656207 0.7574564 0.29685119 FALSE 0.5 0.29685119 FALSE 0.21996282 0.5724455 0.1170639 0.4162114 351607 4476 1953748 1953749 1 23 Same + + 0.000000 -2.39743054 0 -2.397431e+00 NA 1.691298 3.034085 1.1079168 - - - hypothetical protein 1.739887 3.016529 1.0248246 2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 [General function prediction only] R Appr-1-p processing domain protein TRUE TRUE 15 TRUE 0.614643 0.3607032 0.4187799 1.013258 0.8255205 U 0.7711970 0.5752368 15.19 0.67212762 0.1750905 0.7506268 0.30319134 FALSE 0.5 0.30319134 FALSE 0.22127386 0.5752368 0.1217371 0.4189875 351607 4476 1953751 1953752 1 64 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.694091 2.970171 1.0538526 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M glycosyl transferase, group 1 1.807022 3.081507 1.0998743 - - - hypothetical protein TRUE TRUE 16 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 19.99 0.49835452 0.3364722 0.5932826 0.33500426 FALSE 0.5 0.33500426 FALSE 0.20902733 0.6273706 0.2101176 0.4727201 351607 4476 1953752 1953753 1 155 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.807022 3.081507 1.0998743 - - - hypothetical protein 1.536465 2.601838 0.9562848 588 Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] G phosphoglycerate mutase 1 family TRUE TRUE 17 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 26.40 0.22039404 0.3364722 0.2933359 0.12538147 FALSE 0.5 0.12538147 FALSE 0.06994152 0.6273706 0.2101176 0.4727201 351607 4476 1953754 1953755 1 10 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.897136 3.359845 1.0694027 - - - hypothetical protein 1.813767 3.212705 1.0839031 - - - hypothetical protein FALSE TRUE 17 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 12.45 0.68882816 0.3364722 0.7647285 0.52886565 TRUE 0.5 0.52886565 TRUE 0.37061720 0.6273706 0.2101176 0.4727201 351607 4476 1953756 1953757 1 245 Same + + 30.347038 0.00000000 0 3.242511e+01 NA 1.715866 2.917019 1.0123423 1329 Transcriptional regulators, similar to M. xanthus CarD [Transcription] K transcriptional regulator, CarD family 1.432659 2.538140 0.9426360 4956 Integral membrane protein (PIN domain superfamily) [General function prediction only] R PilT protein domain protein TRUE TRUE 17 TRUE 4.004093 2.4797125 0.7388830 1.013258 0.8255205 U 0.7711970 0.9221699 29.57 0.14091543 0.9057149 0.1941020 0.61175479 TRUE 0.5 0.61175479 TRUE 0.33278067 0.9221699 0.7525152 0.8631874 351607 4476 1953757 1953758 1 -3 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.432659 2.538140 0.9426360 4956 Integral membrane protein (PIN domain superfamily) [General function prediction only] R PilT protein domain protein 1.688551 2.974172 1.0309300 1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] I 4-diphosphocytidyl-2C-methyl-D-erythritol synthase TRUE TRUE 18 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 4.46 0.83976334 0.3364722 0.8849946 0.72659456 TRUE 0.5 0.72659456 TRUE 0.58230716 0.6273706 0.2101176 0.4727201 351607 4476 1953758 1953759 1 -3 Same + + 6.445720 28.02700652 0 3.447273e+01 4.0 1.688551 2.974172 1.0309300 1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] I 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1.506464 2.680864 1.0064761 245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Lipid metabolism] I 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase I TRUE TRUE 19 TRUE 3.209120 2.5515279 2.8197449 1.013258 3.2001089 Y 2.6122461 0.9780415 4.46 0.83976334 0.9749186 0.8849946 0.99511503 TRUE 0.5 0.99511503 TRUE 0.97091294 0.9780415 0.8643002 0.9595429 351607 4476 1953759 1953760 1 43 Same + + 41.920832 18.13046286 0 2.228517e+01 146.7 1.506464 2.680864 1.0064761 245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Lipid metabolism] I 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1.740119 2.966324 0.9969188 215 Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J cysteinyl-tRNA synthetase - TRUE TRUE 20 TRUE 4.130138 2.1956978 2.4413313 1.013258 1.0237197 N 0.8991512 0.9627756 17.83 0.58661966 0.9568074 0.6757137 0.96916970 TRUE 0.5 0.96916970 TRUE 0.87656315 0.9627756 0.8334489 0.9323066 351607 4476 1953760 1953761 1 29 Same + + 56.859569 33.02785742 0 2.318817e+02 146.7 1.740119 2.966324 0.9969188 215 Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J cysteinyl-tRNA synthetase 1.774514 3.167165 1.0658333 566 rRNA methylases [Translation, ribosomal structure and biogenesis] J RNA methyltransferase, TrmH family, group 3 J TRUE TRUE 21 TRUE 4.208083 3.4341178 3.1264831 1.013258 1.0237197 Y 2.6122461 0.9875685 16.23 0.65397198 0.9859375 0.7351048 0.99250967 TRUE 0.5 0.99250967 TRUE 0.93488238 0.9875685 0.8836729 0.9769063 351607 4476 1953763 1953764 1 166 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.717893 2.969391 0.9809005 - - - hypothetical protein 1.987125 3.646044 1.1896699 - - - hypothetical protein FALSE TRUE 21 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 27.13 0.19916428 0.3364722 0.2674906 0.11198923 FALSE 0.5 0.11198923 FALSE 0.06205081 0.6273706 0.2101176 0.4727201 351607 4476 1953764 1953765 1 88 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.987125 3.646044 1.1896699 - - - hypothetical protein 1.829842 3.114186 1.0542375 - - - hypothetical protein FALSE TRUE 20 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 22.05 0.41374730 0.3364722 0.5089088 0.26355918 FALSE 0.5 0.26355918 FALSE 0.15806293 0.6273706 0.2101176 0.4727201 351607 4476 1953765 1953766 1 288 Same - - 0.000000 -1.40375424 0 -1.403754e+00 NA 1.829842 3.114186 1.0542375 - - - hypothetical protein 1.791025 3.071384 1.0589188 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family FALSE TRUE 19 TRUE 0.614643 0.3422184 0.4038786 1.013258 0.8255205 U 0.7711970 0.5723920 30.59 0.12255811 0.1654383 0.1701886 0.02694261 FALSE 0.5 0.02694261 FALSE 0.01816681 0.5723920 0.1169743 0.4161583 351607 4476 1953766 1953767 1 134 Same - - 19.932443 38.13455219 0 6.300218e+01 146.7 1.791025 3.071384 1.0589188 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family 1.903047 3.352128 1.0847590 642 Signal transduction histidine kinase [Signal transduction mechanisms] T histidine kinase T FALSE TRUE 18 TRUE 3.822855 2.8574811 3.4060759 1.013258 1.0237197 Y 2.6122461 0.9848705 25.30 0.25425563 0.9828386 0.3336087 0.95128095 TRUE 0.5 0.95128095 TRUE 0.71079303 0.9848705 0.8781773 0.9719599 351607 4476 1953768 1953769 1 97 Same + + 57.896866 -13.39292412 0 -2.535295e+01 NA 1.771242 3.083505 1.0323314 704 Phosphate uptake regulator [Inorganic ion transport and metabolism] P phosphate uptake regulator, PhoU 1.985004 3.514832 1.1064722 226 ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism] P phosphate ABC transporter, periplasmic phosphate-binding protein P TRUE TRUE 18 TRUE 4.212393 0.5677951 0.6071412 1.013258 0.8255205 Y 2.6122461 0.9213241 22.89 0.37609167 0.9046028 0.4695288 0.85110278 TRUE 0.5 0.85110278 TRUE 0.64496100 0.9213241 0.7508466 0.8617967 351607 4476 1953769 1953770 1 8 Same + + 121.597156 34.76751705 0 6.242618e+02 6.0 1.985004 3.514832 1.1064722 226 ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism] P phosphate ABC transporter, periplasmic phosphate-binding protein 2.066114 3.705399 1.1447552 573 ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism] P phosphate ABC transporter, inner membrane subunit PstC P TRUE TRUE 19 TRUE 4.264021 3.9243856 3.2230946 1.013258 3.1310056 Y 2.6122461 0.9917854 11.83 0.68019111 0.9907471 0.7574564 0.99562809 TRUE 0.5 0.99562809 TRUE 0.94628572 0.9917854 0.8922772 0.9846838 351607 4476 1953770 1953771 1 -3 Same + + 211.920600 38.88657439 0 1.131885e+03 6.0 2.066114 3.705399 1.1447552 573 ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism] P phosphate ABC transporter, inner membrane subunit PstC 1.699427 3.072670 1.0764649 581 ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism] P phosphate ABC transporter, inner membrane subunit PstA P TRUE TRUE 20 TRUE 4.173378 4.2071183 3.4410443 1.013258 3.1310056 Y 2.6122461 0.9928140 4.46 0.83976334 0.9919142 0.8849946 0.99844697 TRUE 0.5 0.99844697 TRUE 0.97796280 0.9928140 0.8943789 0.9865897 351607 4476 1953771 1953772 1 -7 Same + + 192.489446 26.38197163 0 9.857618e+02 6.0 1.699427 3.072670 1.0764649 581 ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism] P phosphate ABC transporter, inner membrane subunit PstA 1.879909 3.179527 1.0509539 1117 ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] P phosphate ABC transporter, ATPase subunit P TRUE TRUE 21 TRUE 4.204708 4.1134010 2.7242103 1.013258 3.1310056 Y 2.6122461 0.9900486 1.12 0.87456119 0.9887712 0.9110107 0.99837381 TRUE 0.5 0.99837381 TRUE 0.98235934 0.9900486 0.8887313 0.9814737 351607 4476 1953773 1953774 1 28 Same - - 0.000000 0.00000000 0 0.000000e+00 146.7 1.855604 3.232322 1.0483790 1680 Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms] V beta-lactamase 1.605482 2.831529 0.9887934 2199 FOG: GGDEF domain [Signal transduction mechanisms] T diguanylate cyclase - FALSE TRUE 21 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 N 0.8991512 0.6398865 16.07 0.65742907 0.3713011 0.7380760 0.53126392 TRUE 0.5 0.53126392 TRUE 0.36652467 0.6398865 0.2316508 0.4861761 351607 4476 1953775 1953776 1 23 Same + + 0.000000 3.79660402 0 3.796604e+00 NA 1.690120 2.983078 1.0699768 - - - hypothetical protein 1.931156 3.596801 1.1119492 - - - hypothetical protein TRUE TRUE 21 TRUE 0.614643 1.4981755 1.8049671 1.013258 0.8255205 U 0.7711970 0.7731181 15.19 0.67212762 0.6721613 0.7506268 0.80780344 TRUE 0.5 0.80780344 TRUE 0.64401751 0.7731181 0.4687958 0.6446996 351607 4476 1953776 1953777 1 10 Same + + 0.000000 0.67578248 0 6.757825e-01 NA 1.931156 3.596801 1.1119492 - - - hypothetical protein 1.822953 3.231496 1.0714419 1877 Trehalose-6-phosphatase [Carbohydrate transport and metabolism] G HAD-superfamily hydrolase, subfamily IIB TRUE TRUE 22 TRUE 0.614643 1.2292178 1.3923804 1.013258 0.8255205 U 0.7711970 0.7252021 12.45 0.68882816 0.5766880 0.7647285 0.75097862 TRUE 0.5 0.75097862 TRUE 0.57755321 0.7252021 0.3818013 0.5842472 351607 4476 1953777 1953778 1 605 Same + + 0.000000 -4.12489259 0 -4.412389e+00 146.7 1.822953 3.231496 1.0714419 1877 Trehalose-6-phosphatase [Carbohydrate transport and metabolism] G HAD-superfamily hydrolase, subfamily IIB 1.560234 2.638589 0.9246480 498 Threonine synthase [Amino acid transport and metabolism] E threonine synthase - TRUE TRUE 23 TRUE 0.614643 0.3999407 0.4582016 1.013258 1.0237197 N 0.8991512 0.5951501 32.86 0.09103912 0.2400698 0.1282101 0.03067032 FALSE 0.5 0.03067032 FALSE 0.01807414 0.5951501 0.1552478 0.4390831 351607 4476 1953778 1953779 1 199 Same + + 0.000000 -4.65098568 0 -1.296294e+00 146.7 1.560234 2.638589 0.9246480 498 Threonine synthase [Amino acid transport and metabolism] E threonine synthase 1.358624 2.286785 0.7919594 459 Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] O chaperonin GroEL - TRUE TRUE 24 TRUE 0.614643 0.3409027 0.4693691 1.013258 1.0237197 N 0.8991512 0.5924380 28.22 0.17039396 0.2314768 0.2317059 0.05825914 FALSE 0.5 0.05825914 FALSE 0.03515415 0.5924380 0.1506659 0.4363157 351607 4476 1953781 1953782 1 196 Same + + 0.000000 -2.99644701 0 -2.996447e+00 NA 1.767170 3.117239 1.0626504 3142 Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism] P CutC family protein 1.499028 2.576986 0.9682067 1278 Cold shock proteins [Transcription] K cold-shock DNA-binding domain protein - TRUE TRUE 25 TRUE 0.614643 0.3736674 0.4335860 1.013258 0.8255205 N 0.8991512 0.5858318 28.12 0.17284394 0.2102131 0.2347880 0.05268776 FALSE 0.5 0.05268776 FALSE 0.03277351 0.5858318 0.1395290 0.4296154 351607 4476 1953783 1953784 1 -3 Same - - 18.920239 4.62010740 0 4.065142e+01 NA 1.480531 2.569431 0.9409409 2107 Predicted periplasmic solute-binding protein [General function prediction only] R protein of unknown function DUF191 1.518657 2.662266 0.9693362 775 Nucleoside phosphorylase [Nucleotide transport and metabolism] F hypothetical protein FALSE TRUE 25 TRUE 3.793847 2.6481972 1.8705282 1.013258 0.8255205 U 0.7711970 0.9491918 4.46 0.83976334 0.9402021 0.8849946 0.98800967 TRUE 0.5 0.98800967 TRUE 0.95614118 0.9491918 0.8061932 0.9086592 351607 4476 1953784 1953785 1 -3 Same - - 0.000000 -1.54649738 0 4.189380e+00 NA 1.518657 2.662266 0.9693362 775 Nucleoside phosphorylase [Nucleotide transport and metabolism] F hypothetical protein 1.715092 3.056038 1.0499275 - - - major facilitator superfamily MFS_1 FALSE TRUE 24 TRUE 0.614643 1.5220847 0.4058114 1.013258 0.8255205 U 0.7711970 0.6492163 4.46 0.83976334 0.3963903 0.8849946 0.77485649 TRUE 0.5 0.77485649 TRUE 0.63320657 0.6492163 0.2477832 0.4963538 351607 4476 1953786 1953787 1 248 Same + + 0.000000 -3.12996138 0 -1.586095e+00 NA 1.690979 2.962294 1.0251928 - - - hypothetical protein 1.633604 3.014411 1.0658442 1846 Transcriptional regulators [Transcription] K transcriptional regulator, MarR family TRUE TRUE 24 TRUE 0.614643 0.3450759 0.4370291 1.013258 0.8255205 U 0.7711970 0.5761570 29.67 0.13897855 0.1781922 0.1915971 0.03381524 FALSE 0.5 0.03381524 FALSE 0.02219293 0.5761570 0.1232790 0.4199049 351607 4476 1953787 1953788 1 6 Same + + 2.944439 6.14099765 0 7.857055e+00 146.7 1.633604 3.014411 1.0658442 1846 Transcriptional regulators [Transcription] K transcriptional regulator, MarR family 1.755511 3.134050 1.0856946 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 - TRUE TRUE 25 TRUE 2.797405 1.7057311 1.9699006 1.013258 1.0237197 N 0.8991512 0.9122679 11.28 0.65690447 0.8925658 0.7376256 0.94085247 TRUE 0.5 0.94085247 TRUE 0.84017711 0.9122679 0.7330234 0.8470261 351607 4476 1953788 1953789 1 111 Same + + 0.000000 -2.61830808 0 -4.470941e-01 146.7 1.755511 3.134050 1.0856946 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 1.716151 3.029759 1.0031150 1514 2'-5' RNA ligase [Translation, ribosomal structure and biogenesis] J 2'-5' RNA ligase - TRUE TRUE 26 TRUE 0.614643 0.3494886 0.4248851 1.013258 1.0237197 N 0.8991512 0.5882630 23.91 0.31829062 0.2180940 0.4067290 0.11522499 FALSE 0.5 0.11522499 FALSE 0.07261804 0.5882630 0.1436236 0.4320746 351607 4476 1953790 1953791 1 5 Same - - 0.000000 -0.46575734 0 -4.657573e-01 146.7 1.519436 2.580208 0.9374408 667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] C aldo/keto reductase 1.550855 2.831234 0.9962093 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 - FALSE TRUE 26 TRUE 0.614643 0.3475256 0.4238468 1.013258 1.0237197 N 0.8991512 0.5880219 10.96 0.64096174 0.2173153 0.7238570 0.33140443 FALSE 0.5 0.33140443 FALSE 0.22982843 0.5880219 0.1432173 0.4318303 351607 4476 1953791 1953792 1 38 Same - - 0.000000 -0.95499233 0 -1.489765e+00 146.7 1.550855 2.831234 0.9962093 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 1.541364 2.612775 0.9261605 1932 Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism] HE putative phosphoserine aminotransferase - FALSE TRUE 25 TRUE 0.614643 0.3431851 0.4025679 1.013258 1.0237197 N 0.8991512 0.5854585 17.25 0.61811343 0.2089972 0.7038465 0.29955192 FALSE 0.5 0.29955192 FALSE 0.20703308 0.5854585 0.1389006 0.4292385 351607 4476 1953792 1953793 1 161 Same - - 0.000000 0.34188661 0 -1.362842e-01 146.7 1.541364 2.612775 0.9261605 1932 Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism] HE putative phosphoserine aminotransferase 1.683091 2.938033 1.0314699 372 Citrate synthase [Energy production and conversion] C Citrate (Si)-synthase - FALSE TRUE 24 TRUE 0.614643 0.3634918 1.3561382 1.013258 1.0237197 N 0.8991512 0.6837929 26.75 0.21021230 0.4834015 0.2809989 0.19939742 FALSE 0.5 0.19939742 FALSE 0.10599814 0.6837929 0.3081804 0.5352108 351607 4476 1953795 1953796 1 102 Same - - 0.000000 -0.80677003 0 -8.254622e-01 NA 1.763432 2.997450 1.0343172 - - - hypothetical protein 1.841829 3.093588 1.0240596 1573 Uracil-DNA glycosylase [DNA replication, recombination, and repair] L phage SPO1 DNA polymerase-related protein FALSE TRUE 23 TRUE 0.614643 0.3379537 0.4043350 1.013258 0.8255205 U 0.7711970 0.5721553 23.27 0.35593177 0.1646311 0.4479563 0.09821369 FALSE 0.5 0.09821369 FALSE 0.06796968 0.5721553 0.1165784 0.4159235 351607 4476 1953797 1953798 1 36 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.920597 3.533504 1.1537431 - - - O-antigen polymerase 1.843217 3.286831 1.0892384 - - - hypothetical protein TRUE TRUE 23 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 16.98 0.63084993 0.3364722 0.7150419 0.46426337 FALSE 0.5 0.46426337 FALSE 0.31252269 0.6273706 0.2101176 0.4727201 351607 4476 1953798 1953799 1 45 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.843217 3.286831 1.0892384 - - - hypothetical protein 1.474915 2.508393 0.9438240 - - - hypothetical protein TRUE TRUE 24 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 18.03 0.57555365 0.3364722 0.6656735 0.40745204 FALSE 0.5 0.40745204 FALSE 0.26509175 0.6273706 0.2101176 0.4727201 351607 4476 1953799 1953800 1 7 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.474915 2.508393 0.9438240 - - - hypothetical protein 1.850420 3.475222 1.0957306 - - - hypothetical protein TRUE TRUE 25 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 11.56 0.67008715 0.3364722 0.7488924 0.50738042 TRUE 0.5 0.50738042 TRUE 0.35077435 0.6273706 0.2101176 0.4727201 351607 4476 1953800 1953801 1 60 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.850420 3.475222 1.0957306 - - - hypothetical protein 1.737083 3.044409 1.0581334 - - - hypothetical protein TRUE TRUE 26 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 19.62 0.51102959 0.3364722 0.6054580 0.34639354 FALSE 0.5 0.34639354 FALSE 0.21753474 0.6273706 0.2101176 0.4727201 351607 4476 1953804 1953805 1 326 Same + + 0.000000 0.00000000 0 0.000000e+00 146.7 1.641330 2.956244 1.0272784 840 Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] NT methyl-accepting chemotaxis sensory transducer 2.014451 3.577304 1.1214599 1472 Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] G glycoside hydrolase, family 3 domain protein - TRUE TRUE 27 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 N 0.8991512 0.6398865 31.26 0.11205265 0.3713011 0.1563277 0.06935867 FALSE 0.5 0.06935867 FALSE 0.03665164 0.6398865 0.2316508 0.4861761 351607 4476 1953807 1953808 1 125 Same + + 25.317306 4.86016115 0 8.881991e+01 62.0 1.430568 2.379471 0.7870310 1653 ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism] G extracellular solute-binding protein, family 1 1.629460 2.750537 0.9720797 1175 ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism] G binding-protein-dependent transport systems inner membrane component G TRUE TRUE 28 TRUE 3.931273 3.0004544 1.8901192 1.013258 1.5954103 Y 2.6122461 0.9747155 24.71 0.27632847 0.9710210 0.3592518 0.92750835 TRUE 0.5 0.92750835 TRUE 0.69686467 0.9747155 0.8575586 0.9535481 351607 4476 1953808 1953809 1 108 Same + + 51.384609 17.20396912 0 3.138504e+02 62.0 1.629460 2.750537 0.9720797 1175 ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism] G binding-protein-dependent transport systems inner membrane component 1.758164 2.910767 0.9816621 395 ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism] G binding-protein-dependent transport systems inner membrane component G TRUE TRUE 29 TRUE 4.184282 3.5996603 2.3978008 1.013258 1.5954103 Y 2.6122461 0.9844491 23.73 0.32893004 0.9823531 0.4185097 0.96464648 TRUE 0.5 0.96464648 TRUE 0.77803663 0.9844491 0.8773197 0.9711896 351607 4476 1953809 1953810 1 -3 Same + + 13.355800 5.16148812 0 3.001845e+01 146.7 1.758164 2.910767 0.9816621 395 ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism] G binding-protein-dependent transport systems inner membrane component 1.785591 2.962247 1.0072139 2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] G Beta-glucosidase G TRUE TRUE 30 TRUE 3.584183 2.4019573 1.9164602 1.013258 1.0237197 Y 2.6122461 0.9641651 4.46 0.83976334 0.9584797 0.8849946 0.99180200 TRUE 0.5 0.99180200 TRUE 0.96398138 0.9641651 0.8362474 0.9347565 351607 4476 1953813 1953814 1 168 Same - - 0.000000 -1.18689212 0 -1.414028e+00 NA 1.804353 2.957178 0.9831380 3828 Uncharacterized protein conserved in bacteria [Function unknown] S hypothetical protein 1.852251 3.234022 1.0761733 1926 Predicted phosphoribosyltransferases [General function prediction only] R phosphoribosyltransferase FALSE TRUE 30 TRUE 0.614643 0.3426204 0.4024051 1.013258 0.8255205 U 0.7711970 0.5722599 27.23 0.19633471 0.1649878 0.2640104 0.04604766 FALSE 0.5 0.04604766 FALSE 0.03128284 0.5722599 0.1167534 0.4160272 351607 4476 1953815 1953816 1 212 Same + + 0.000000 -3.49451797 0 -4.732752e+00 146.7 1.754857 2.949865 0.9901515 1064 Zn-dependent alcohol dehydrogenases [General function prediction only] R Alcohol dehydrogenase GroES domain protein 1.609004 2.758090 0.9930891 3408 Glycogen debranching enzyme [Carbohydrate transport and metabolism] G Amylo-alpha-1,6-glucosidase TRUE TRUE 30 TRUE 0.614643 0.4070817 0.4456151 1.013258 1.0237197 U 0.7711970 0.5861984 28.62 0.16097170 0.2114056 0.2197915 0.04891638 FALSE 0.5 0.04891638 FALSE 0.03032192 0.5861984 0.1401461 0.4299857 351607 4476 1953816 1953817 1 286 Same + + 32.580537 5.69264738 0 7.378539e+01 146.7 1.609004 2.758090 0.9930891 3408 Glycogen debranching enzyme [Carbohydrate transport and metabolism] G Amylo-alpha-1,6-glucosidase 1.628302 2.776890 0.9644409 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M glycosyl transferase, group 1 - TRUE TRUE 31 TRUE 4.034885 2.9325759 1.9510810 1.013258 1.0237197 N 0.8991512 0.9607518 30.56 0.12305575 0.9543632 0.1708420 0.74583559 TRUE 0.5 0.74583559 TRUE 0.40550213 0.9607518 0.8293765 0.9287489 351607 4476 1953818 1953819 1 128 Same - - 0.000000 0.00000000 0 0.000000e+00 146.7 1.793138 3.146350 1.0338375 3764 Sortase (surface protein transpeptidase) [Cell envelope biogenesis, outer membrane] M peptidase C60, sortase A and B 1.848835 3.349472 1.1056846 - - - hypothetical protein FALSE TRUE 31 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 U 0.7711970 0.6321473 24.89 0.26896680 0.3499276 0.3507517 0.16531130 FALSE 0.5 0.16531130 FALSE 0.09318541 0.6321473 0.2183213 0.4778293 351607 4476 1953819 1953820 1 168 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.848835 3.349472 1.1056846 - - - hypothetical protein 1.668218 3.119826 1.1202594 - - - hypothetical protein FALSE TRUE 30 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 27.23 0.19633471 0.3364722 0.2640104 0.11022769 FALSE 0.5 0.11022769 FALSE 0.06102080 0.6273706 0.2101176 0.4727201 351607 4476 1953821 1953822 1 236 Same + + 0.000000 0.00000000 0 0.000000e+00 146.7 1.829902 3.242283 1.0847990 1609 Transcriptional regulators [Transcription] K transcriptional regulator, LacI family 1.843438 3.350197 1.0994920 2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only] PR Rieske (2Fe-2S) domain protein - TRUE TRUE 30 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 N 0.8991512 0.6398865 29.36 0.14508614 0.3713011 0.1994814 0.09109711 FALSE 0.5 0.09109711 FALSE 0.04867517 0.6398865 0.2316508 0.4861761 351607 4476 1953822 1953823 1 399 Same + + 0.000000 0.00000000 0 0.000000e+00 146.7 1.843438 3.350197 1.0994920 2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only] PR Rieske (2Fe-2S) domain protein 1.706507 2.810269 0.9586653 - - - hypothetical protein TRUE TRUE 31 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 U 0.7711970 0.6321473 31.92 0.10273309 0.3499276 0.1439226 0.05805387 FALSE 0.5 0.05805387 FALSE 0.03098746 0.6321473 0.2183213 0.4778293 351607 4476 1953823 1953824 1 11 Same + + 0.000000 0.00000000 0 0.000000e+00 146.7 1.706507 2.810269 0.9586653 - - - hypothetical protein 2.191633 3.906094 1.1599271 1250 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] I 3-hydroxybutyryl-CoA dehydrogenase TRUE TRUE 32 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 U 0.7711970 0.6321473 12.82 0.68951817 0.3499276 0.7653076 0.54450939 TRUE 0.5 0.54450939 TRUE 0.38281704 0.6321473 0.2183213 0.4778293 351607 4476 1953824 1953825 1 277 Same + + 0.000000 -1.38794107 0 -1.546228e+00 146.7 2.191633 3.906094 1.1599271 1250 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] I 3-hydroxybutyryl-CoA dehydrogenase 1.664314 2.883044 1.0174300 667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] C aldo/keto reductase - TRUE TRUE 33 TRUE 0.614643 0.3444129 0.4035799 1.013258 1.0237197 N 0.8991512 0.5856484 30.31 0.12729855 0.2096159 0.1764010 0.03724430 FALSE 0.5 0.03724430 FALSE 0.02304841 0.5856484 0.1392202 0.4294302 351607 4476 1953826 1953827 1 150 Same - - 0.000000 -0.88801111 0 -8.880111e-01 NA 1.882438 3.242772 1.0676964 - - - hypothetical protein 1.873129 3.304925 1.0740828 1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism] H UbiA prenyltransferase FALSE TRUE 33 TRUE 0.614643 0.3378488 0.4034573 1.013258 0.8255205 U 0.7711970 0.5720536 26.10 0.22918199 0.1642837 0.3038985 0.05521983 FALSE 0.5 0.05521983 FALSE 0.03769412 0.5720536 0.1164082 0.4158225 351607 4476 1953829 1953830 1 -3 Same - - 0.000000 6.30128861 0 6.301289e+00 146.7 1.904585 3.428609 1.1148808 - - - hypothetical protein 1.729134 3.010911 0.9992084 1131 ABC-type multidrug transport system, ATPase component [Defense mechanisms] V ABC transporter related FALSE TRUE 32 TRUE 0.614643 1.6299206 1.9807108 1.013258 1.0237197 U 0.7711970 0.7957700 4.46 0.83976334 0.7132931 0.8849946 0.92876690 TRUE 0.5 0.92876690 TRUE 0.84539495 0.7957700 0.5106139 0.6747794 351607 4476 1953830 1377691 1 599 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.729134 3.010911 0.9992084 1131 ABC-type multidrug transport system, ATPase component [Defense mechanisms] V ABC transporter related NA NA NA FALSE TRUE 31 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 32.84 0.09126985 0.3364722 0.1285217 0.04846276 FALSE 0.5 0.04846276 FALSE 0.02602206 0.6273706 0.2101176 0.4727201 351607 4476 1377691 1953831 1 702 Same - - 0.000000 0.00000000 0 0.000000e+00 NA NA NA NA 1.768590 2.933859 0.9399552 788 Formyltetrahydrofolate hydrolase [Nucleotide transport and metabolism] F formyltetrahydrofolate deformylase FALSE TRUE 30 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 32.98 0.08967048 0.3364722 0.1263603 0.04757425 FALSE 0.5 0.04757425 FALSE 0.02553393 0.6273706 0.2101176 0.4727201 351607 4476 1953833 1953834 1 164 Same - - 0.000000 2.47598302 0 3.696274e+00 NA 1.793425 3.066750 1.0176738 1970 Large-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] M large conductance mechanosensitive channel protein 1.842689 3.292102 1.1010682 - - - hypothetical protein FALSE TRUE 29 TRUE 0.614643 1.4902854 1.6402866 1.013258 0.8255205 U 0.7711970 0.7597347 27.00 0.20290005 0.6467069 0.2720726 0.31784967 FALSE 0.5 0.31784967 FALSE 0.16910286 0.7597347 0.4442991 0.6273920 351607 4476 1953834 1953835 1 108 Same - - 0.000000 -4.08068681 0 -4.390362e+00 NA 1.842689 3.292102 1.1010682 - - - hypothetical protein 1.725257 2.908670 1.0080087 5 Purine nucleoside phosphorylase [Nucleotide transport and metabolism] F S-methyl-5-thioadenosine phosphorylase FALSE TRUE 28 TRUE 0.614643 0.3984599 0.4564339 1.013258 0.8255205 U 0.7711970 0.5818066 23.73 0.32893004 0.1970199 0.4185097 0.10735448 FALSE 0.5 0.10735448 FALSE 0.06979734 0.5818066 0.1327594 0.4255606 351607 4476 1953836 1953837 1 15 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.719373 3.021614 1.0334930 465 ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] O ATP-dependent metalloprotease FtsH 1.544967 2.639062 0.9496126 71 Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones] O heat shock protein Hsp20 O TRUE TRUE 28 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 Y 2.6122461 0.7314466 13.95 0.68341915 0.5898391 0.7601795 0.75636078 TRUE 0.5 0.75636078 TRUE 0.58295757 0.7314466 0.3930276 0.5918922 351607 4476 1953838 1953839 1 97 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.695691 3.039736 1.0845230 2331 Uncharacterized protein conserved in bacteria [Function unknown] S putative regulatory protein, FmdB family 1.856175 3.115082 1.0561718 - - - hypothetical protein FALSE TRUE 28 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 22.89 0.37609167 0.3364722 0.4695288 0.23411386 FALSE 0.5 0.23411386 FALSE 0.13819218 0.6273706 0.2101176 0.4727201 351607 4476 1953839 1953840 1 90 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.856175 3.115082 1.0561718 - - - hypothetical protein 1.651202 2.997595 1.0538952 3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] P sodium/hydrogen exchanger FALSE TRUE 27 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 22.17 0.40850746 0.3364722 0.5034988 0.25937984 FALSE 0.5 0.25937984 FALSE 0.15520392 0.6273706 0.2101176 0.4727201 351607 4476 1953840 1953841 1 -3 Same - - 3.465736 -8.60758300 0 -1.494658e+01 146.7 1.651202 2.997595 1.0538952 3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] P sodium/hydrogen exchanger 1.732007 3.058209 1.0389470 212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism] H 5-formyltetrahydrofolate cyclo-ligase - FALSE TRUE 26 TRUE 2.889648 0.5482270 0.5534853 1.013258 1.0237197 N 0.8991512 0.8083727 4.46 0.83976334 0.7351793 0.8849946 0.93568763 TRUE 0.5 0.93568763 TRUE 0.85729277 0.8083727 0.5340761 0.6919581 351607 4476 1953842 1953843 1 138 Same + + 0.000000 1.78763575 0 1.787636e+00 146.7 1.636258 2.892651 1.0238711 2199 FOG: GGDEF domain [Signal transduction mechanisms] T diguanylate cyclase 1.516334 2.550645 0.9233956 1210 UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] M UTP-glucose-1-phosphate uridylyltransferase - TRUE TRUE 26 TRUE 0.614643 1.3276126 1.5359654 1.013258 1.0237197 N 0.8991512 0.7529844 25.53 0.24666729 0.6335249 0.3246831 0.36144501 FALSE 0.5 0.36144501 FALSE 0.19938325 0.7529844 0.4320022 0.6187892 351607 4476 1953843 1953844 1 -3 Same + + 4.127134 28.12709465 0 1.947953e+01 146.7 1.516334 2.550645 0.9233956 1210 UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] M UTP-glucose-1-phosphate uridylyltransferase 1.574632 2.754441 0.9758593 303 Molybdopterin biosynthesis enzyme [Coenzyme metabolism] H molybdenum cofactor synthesis domain - TRUE TRUE 27 TRUE 2.975376 2.1172136 2.8266513 1.013258 1.0237197 N 0.8991512 0.9482465 4.46 0.83976334 0.9390288 0.8849946 0.98776220 TRUE 0.5 0.98776220 TRUE 0.95563301 0.9482465 0.8043032 0.9070336 351607 4476 1953844 1953845 1 -3 Same + + 58.768436 6.06988659 0 2.362749e+02 9.0 1.574632 2.754441 0.9758593 303 Molybdopterin biosynthesis enzyme [Coenzyme metabolism] H molybdenum cofactor synthesis domain 1.675505 2.964536 1.0457109 315 Molybdenum cofactor biosynthesis enzyme [Coenzyme metabolism] H molybdenum cofactor biosynthesis protein C H TRUE TRUE 28 TRUE 4.216551 3.4481225 1.9672045 1.013258 2.9761616 Y 2.6122461 0.9832604 4.46 0.83976334 0.9809812 0.8849946 0.99631427 TRUE 0.5 0.99631427 TRUE 0.97344118 0.9832604 0.8749012 0.9690192 351607 4476 1953845 1953846 1 136 Same + + 68.415085 26.80636976 0 1.990353e+02 9.0 1.675505 2.964536 1.0457109 315 Molybdenum cofactor biosynthesis enzyme [Coenzyme metabolism] H molybdenum cofactor biosynthesis protein C 1.594377 2.822658 1.0450754 521 Molybdopterin biosynthesis enzymes [Coenzyme metabolism] H molybdenum cofactor synthesis domain H TRUE TRUE 29 TRUE 4.239289 3.3508239 2.7411116 1.013258 2.9761616 Y 2.6122461 0.9878405 25.37 0.25190317 0.9862490 0.3308477 0.96023955 TRUE 0.5 0.96023955 TRUE 0.72002772 0.9878405 0.8842274 0.9774063 351607 4476 1953846 1953847 1 152 Same + + 0.000000 -0.85003608 0 -3.880265e+00 146.7 1.594377 2.822658 1.0450754 521 Molybdopterin biosynthesis enzymes [Coenzyme metabolism] H molybdenum cofactor synthesis domain 1.697932 3.015325 1.0300017 1670 Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis] J GCN5-related N-acetyltransferase - TRUE TRUE 30 TRUE 0.614643 0.3872448 0.4038103 1.013258 1.0237197 N 0.8991512 0.5885166 26.18 0.22682318 0.2189125 0.3010711 0.07597378 FALSE 0.5 0.07597378 FALSE 0.04704874 0.5885166 0.1440511 0.4323316 351607 4476 1953847 1953848 1 288 Same + + 0.000000 2.78029737 0 2.780297e+00 NA 1.697932 3.015325 1.0300017 1670 Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis] J GCN5-related N-acetyltransferase 1.737580 3.109605 1.0856574 - - - hypothetical protein TRUE TRUE 31 TRUE 0.614643 1.4336232 1.6955973 1.013258 0.8255205 U 0.7711970 0.7613503 30.59 0.12255811 0.6498271 0.1701886 0.20584651 FALSE 0.5 0.20584651 FALSE 0.10154072 0.7613503 0.4472480 0.6294635 351607 4476 1377710 1953849 1 101 Same - - 0.000000 0.00000000 0 0.000000e+00 NA NA NA NA 1.542517 2.636778 0.9355956 4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones] O glycosyl transferase, family 39 FALSE TRUE 31 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 23.20 0.35986247 0.3364722 0.4521898 0.22183296 FALSE 0.5 0.22183296 FALSE 0.13008838 0.6273706 0.2101176 0.4727201 351607 4476 1953849 1953850 1 11 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.542517 2.636778 0.9355956 4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones] O glycosyl transferase, family 39 1.519868 2.660697 0.9624235 - - - hypothetical protein FALSE TRUE 30 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 12.82 0.68951817 0.3364722 0.7653076 0.52966817 TRUE 0.5 0.52966817 TRUE 0.37136887 0.6273706 0.2101176 0.4727201 351607 4476 1953851 1953852 1 210 Same + + 26.266442 -9.81301923 0 8.198728e+01 146.7 1.780390 3.199942 1.1040612 313 Predicted methyltransferases [General function prediction only] R Protein of unknown function UPF0011 1.619828 2.736336 0.9667113 143 Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J methionyl-tRNA synthetase TRUE TRUE 30 TRUE 3.953292 2.9663831 0.5753380 1.013258 1.0237197 U 0.7711970 0.9263659 28.57 0.16211666 0.9112022 0.2212445 0.66504085 TRUE 0.5 0.66504085 TRUE 0.38096084 0.9263659 0.7608037 0.8701155 351607 4476 1953852 1953853 1 -3 Same + + 83.746914 15.56152483 0 3.346564e+02 NA 1.619828 2.736336 0.9667113 143 Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J methionyl-tRNA synthetase 1.735383 2.933850 1.0021322 84 Mg-dependent DNase [DNA replication, recombination, and repair] L hydrolase, TatD family - TRUE TRUE 31 TRUE 4.266007 3.6285083 2.3548101 1.013258 0.8255205 N 0.8991512 0.9745346 4.46 0.83976334 0.9708083 0.8849946 0.99429513 TRUE 0.5 0.99429513 TRUE 0.96919031 0.9745346 0.8571923 0.9532231 351607 4476 1953853 1953854 1 232 Same + + 3.258097 23.09883483 0 3.313347e+01 NA 1.735383 2.933850 1.0021322 84 Mg-dependent DNase [DNA replication, recombination, and repair] L hydrolase, TatD family 1.960594 3.405129 1.0931881 3583 Uncharacterized protein conserved in bacteria [Function unknown] S G5 domain protein TRUE TRUE 32 TRUE 2.847637 2.5060070 2.5655008 1.013258 0.8255205 U 0.7711970 0.9421862 29.22 0.14794608 0.9314511 0.2031588 0.70232506 TRUE 0.5 0.70232506 TRUE 0.39830926 0.9421862 0.7922081 0.8966732 351607 4476 1953854 1953855 1 121 Same + + 3.258097 25.10088269 0 3.517212e+01 146.7 1.960594 3.405129 1.0931881 3583 Uncharacterized protein conserved in bacteria [Function unknown] S G5 domain protein 1.842679 3.220753 1.0602647 30 Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] J dimethyladenosine transferase TRUE TRUE 33 TRUE 2.847637 2.5668274 2.6374428 1.013258 1.0237197 U 0.7711970 0.9458252 24.45 0.28855427 0.9360129 0.3732541 0.85576257 TRUE 0.5 0.85576257 TRUE 0.61787715 0.9458252 0.7994665 0.9028817 351607 4476 1953855 1953856 1 285 Same + + 0.000000 0.00000000 0 0.000000e+00 146.7 1.842679 3.220753 1.0602647 30 Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] J dimethyladenosine transferase 1.839313 3.280115 1.0373420 3509 Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] Q esterase, PHB depolymerase family - TRUE TRUE 34 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 N 0.8991512 0.6398865 30.53 0.12355582 0.3713011 0.1714983 0.07685832 FALSE 0.5 0.07685832 FALSE 0.04076965 0.6398865 0.2316508 0.4861761 351607 4476 1953856 1953857 1 591 Same + + 0.000000 0.00000000 0 0.000000e+00 10.0 1.839313 3.280115 1.0373420 3509 Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] Q esterase, PHB depolymerase family 1.712695 3.011316 0.9949239 3693 Beta-1,4-xylanase [Carbohydrate transport and metabolism] G glycoside hydrolase, family 10 - TRUE TRUE 35 TRUE 0.614643 0.6402337 0.7388830 1.013258 2.8770518 N 0.8991512 0.6827509 32.80 0.09173359 0.4809080 0.1291478 0.08556312 FALSE 0.5 0.08556312 FALSE 0.04270044 0.6827509 0.3063460 0.5340128 351607 4476 1953857 1953858 1 130 Same + + 0.000000 0.00000000 0 0.000000e+00 146.7 1.712695 3.011316 0.9949239 3693 Beta-1,4-xylanase [Carbohydrate transport and metabolism] G glycoside hydrolase, family 10 1.946814 3.465819 1.1313085 1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism] I 4-diphosphocytidyl-2C-methyl-D-erythritol kinase - TRUE TRUE 36 TRUE 0.614643 0.6402337 0.7388830 1.013258 1.0237197 N 0.8991512 0.6398865 25.13 0.26014786 0.3713011 0.3405002 0.17195435 FALSE 0.5 0.17195435 FALSE 0.09584976 0.6398865 0.2316508 0.4861761 351607 4476 1953859 1953860 1 194 Same - - 0.000000 1.44716867 0 5.967047e-01 146.7 2.122289 3.685439 1.1176446 1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription] K RNA polymerase, sigma-24 subunit, ECF subfamily 2.236968 3.976327 1.1815716 451 Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] MG NAD-dependent epimerase/dehydratase - FALSE TRUE 36 TRUE 0.614643 1.2248694 1.5025951 1.013258 1.0237197 N 0.8991512 0.7449278 28.03 0.17508145 0.6174791 0.2375970 0.25518041 FALSE 0.5 0.25518041 FALSE 0.13197764 0.7449278 0.4173767 0.6086306 351607 4476 1953861 1953862 1 78 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.863523 3.232893 1.0859838 604 NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] CR Alcohol dehydrogenase, zinc-binding domain protein 2.080431 3.646141 1.1304471 - - - hypothetical protein TRUE TRUE 36 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 21.32 0.44509930 0.3364722 0.5408196 0.28914356 FALSE 0.5 0.28914356 FALSE 0.17585187 0.6273706 0.2101176 0.4727201 351607 4476 1953863 1953864 1 24 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 2.100384 3.676268 1.1237062 - - - hypothetical protein 1.648072 2.962724 1.0439841 672 High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism] P iron permease FTR1 TRUE TRUE 37 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 15.37 0.66966838 0.3364722 0.7485361 0.50690710 TRUE 0.5 0.50690710 TRUE 0.35034322 0.6273706 0.2101176 0.4727201 351607 4476 1953864 1953865 1 62 Same + + 6.429719 5.02465805 0 1.278124e+02 NA 1.648072 2.962724 1.0439841 672 High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism] P iron permease FTR1 1.883487 3.263770 1.0547396 2822 Predicted periplasmic lipoprotein involved in iron transport [Inorganic ion transport and metabolism] P protein of unknown function DUF451 P TRUE TRUE 38 TRUE 3.196887 3.1525894 1.9006254 1.013258 0.8255205 Y 2.6122461 0.9646016 19.82 0.50422624 0.9590040 0.5989374 0.95966348 TRUE 0.5 0.95966348 TRUE 0.83941875 0.9646016 0.8371269 0.9355272 351607 4476 1953865 1953866 1 18 Same + + 6.429719 12.73425267 0 1.505363e+02 NA 1.883487 3.263770 1.0547396 2822 Predicted periplasmic lipoprotein involved in iron transport [Inorganic ion transport and metabolism] P protein of unknown function DUF451 1.829983 3.178814 1.0697722 2837 Predicted iron-dependent peroxidase [Inorganic ion transport and metabolism] P Tat-translocated enzyme P TRUE TRUE 39 TRUE 3.196887 3.2327555 2.2555888 1.013258 0.8255205 Y 2.6122461 0.9702153 14.46 0.67964674 0.9657050 0.7569966 0.98353647 TRUE 0.5 0.98353647 TRUE 0.92234777 0.9702153 0.8484548 0.9454912 351607 4476 1953866 1953867 1 171 Same + + 0.000000 -8.54342289 0 -8.543423e+00 NA 1.829983 3.178814 1.0697722 2837 Predicted iron-dependent peroxidase [Inorganic ion transport and metabolism] P Tat-translocated enzyme 1.616125 2.796882 0.9829869 1321 Mn-dependent transcriptional regulator [Transcription] K iron (metal) dependent repressor, DtxR family - TRUE TRUE 40 TRUE 0.614643 0.4859391 0.5520341 1.013258 0.8255205 N 0.8991512 0.6058110 27.34 0.19326653 0.2731019 0.2602270 0.08257497 FALSE 0.5 0.08257497 FALSE 0.04782288 0.6058110 0.1733135 0.4500562 351607 4476 1953867 1953868 1 106 Same + + 0.000000 -5.55644290 0 -5.641000e+00 146.7 1.616125 2.796882 0.9829869 1321 Mn-dependent transcriptional regulator [Transcription] K iron (metal) dependent repressor, DtxR family 1.657009 2.921624 1.0386705 1131 ABC-type multidrug transport system, ATPase component [Defense mechanisms] V ABC transporter related - TRUE TRUE 41 TRUE 0.614643 0.4258904 0.4852323 1.013258 1.0237197 N 0.8991512 0.5997259 23.54 0.34022458 0.2543915 0.4309051 0.14961551 FALSE 0.5 0.14961551 FALSE 0.09125283 0.5997259 0.1629911 0.4437743 351607 4476 1953868 1953869 1 73 Same + + 10.506601 6.60952562 0 9.574293e+01 NA 1.657009 2.921624 1.0386705 1131 ABC-type multidrug transport system, ATPase component [Defense mechanisms] V ABC transporter related 1.789488 3.140154 1.0681687 - - - ABC-2 type transporter TRUE TRUE 42 TRUE 3.475713 3.0304823 2.0106500 1.013258 0.8255205 U 0.7711970 0.9506484 20.77 0.46854379 0.9420054 0.5641798 0.93472666 TRUE 0.5 0.93472666 TRUE 0.78888667 0.9506484 0.8091071 0.9111691 351607 4476 1953869 1953870 1 85 Same + + 11.308800 3.55141309 0 3.488932e+01 NA 1.789488 3.140154 1.0681687 - - - ABC-2 type transporter 1.690597 3.120221 1.1001789 4585 Signal transduction histidine kinase [Signal transduction mechanisms] T putative signal transduction histidine kinase TRUE TRUE 43 TRUE 3.497855 2.5553468 1.7872512 1.013258 0.8255205 U 0.7711970 0.9392891 21.89 0.42068568 0.9277939 0.5160383 0.90320254 TRUE 0.5 0.90320254 TRUE 0.72782815 0.9392891 0.7864386 0.8917573 351607 4476 1953870 1953871 1 -3 Same + + 14.774536 4.70521529 0 7.321940e+01 37.0 1.690597 3.120221 1.1001789 4585 Signal transduction histidine kinase [Signal transduction mechanisms] T putative signal transduction histidine kinase 1.719953 3.070060 1.0404824 2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, LuxR family T TRUE TRUE 44 TRUE 3.638278 2.9283686 1.8796531 1.013258 2.4222771 Y 2.6122461 0.9730890 4.46 0.83976334 0.9691054 0.8849946 0.99395379 TRUE 0.5 0.99395379 TRUE 0.96847457 0.9730890 0.8542660 0.9506290 351607 4476 1953873 1953874 1 102 Same + + 0.000000 -4.59500422 0 -4.684068e+00 NA 1.577694 2.753094 0.9643626 1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH [Signal transduction mechanisms] T PhoH family protein 1.626986 2.800365 0.9802567 791 Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane] M NLP/P60 protein - TRUE TRUE 45 TRUE 0.614643 0.4044878 0.4669629 1.013258 0.8255205 N 0.8991512 0.5914394 23.27 0.35593177 0.2282930 0.4479563 0.14051237 FALSE 0.5 0.14051237 FALSE 0.08821016 0.5914394 0.1489802 0.4352992 351607 4476 1953876 1953877 1 147 Same + + 0.000000 32.19790467 0 3.219790e+01 NA 1.654257 3.028594 1.0731660 2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane] M D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1.712712 2.934409 0.9811010 5282 Uncharacterized conserved protein [Function unknown] S hypothetical protein TRUE TRUE 46 TRUE 0.614643 2.4722346 3.0971146 1.013258 0.8255205 U 0.7711970 0.8872080 25.91 0.23485572 0.8579768 0.3106764 0.64964837 TRUE 0.5 0.64964837 TRUE 0.39930818 0.8872080 0.6841143 0.8072676 351607 4476 1953877 1953878 1 137 Same + + 0.000000 28.82138670 0 2.872786e+01 NA 1.712712 2.934409 0.9811010 5282 Uncharacterized conserved protein [Function unknown] S hypothetical protein 1.668308 3.016168 1.0438733 37 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control [Cell division and chromosome partitioning] D tRNA(Ile)-lysidine synthetase TRUE TRUE 47 TRUE 0.614643 2.3618935 2.8683185 1.013258 0.8255205 U 0.7711970 0.8734074 25.45 0.24926197 0.8380810 0.3277414 0.63215351 TRUE 0.5 0.63215351 TRUE 0.38920111 0.8734074 0.6574342 0.7860447 351607 4476 1953878 1953879 1 115 Same + + 6.915723 26.92155643 0 3.807731e+01 146.7 1.668308 3.016168 1.0438733 37 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control [Cell division and chromosome partitioning] D tRNA(Ile)-lysidine synthetase 1.429364 2.474662 0.9241320 634 Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism] F hypoxanthine phosphoribosyltransferase - TRUE TRUE 48 TRUE 3.281630 2.6131076 2.7546824 1.013258 1.0237197 N 0.8991512 0.9586313 24.15 0.30452407 0.9517912 0.3913331 0.89631724 TRUE 0.5 0.89631724 TRUE 0.67382614 0.9586313 0.8251141 0.9250344 351607 4476 1953879 1953880 1 405 Same + + 38.286689 3.07630857 0 2.605996e+02 146.7 1.429364 2.474662 0.9241320 634 Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism] F hypoxanthine phosphoribosyltransferase 1.438988 2.417754 0.8657211 465 ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] O ATP-dependent metalloprotease FtsH - TRUE TRUE 49 TRUE 4.107852 3.4950562 1.7472087 1.013258 1.0237197 N 0.8991512 0.9641920 31.98 0.10193286 0.9585119 0.1428527 0.72393106 TRUE 0.5 0.72393106 TRUE 0.36703277 0.9641920 0.8363015 0.9348039 351607 4476 1953880 1953881 1 3 Same + + 2.197225 38.46266473 0 2.412004e+01 146.7 1.438988 2.417754 0.8657211 465 ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] O ATP-dependent metalloprotease FtsH 1.631937 2.741239 0.9733161 302 GTP cyclohydrolase I [Coenzyme metabolism] H GTP cyclohydrolase I - TRUE TRUE 50 TRUE 2.503465 2.2373772 3.4215919 1.013258 1.0237197 N 0.8991512 0.9526571 10.07 0.61817085 0.9444831 0.7038973 0.96496495 TRUE 0.5 0.96496495 TRUE 0.87569301 0.9526571 0.8131288 0.9146402 351607 4476 1953881 1953882 1 167 Same + + 0.000000 -2.04153913 0 -2.261555e+00 NA 1.631937 2.741239 0.9733161 302 GTP cyclohydrolase I [Coenzyme metabolism] H GTP cyclohydrolase I 1.583899 2.771687 0.9927339 2898 Uncharacterized conserved protein [Function unknown] S protein of unknown function DUF470 TRUE TRUE 51 TRUE 0.614643 0.3572081 0.4118608 1.013258 0.8255205 U 0.7711970 0.5742572 27.19 0.19746193 0.1717775 0.2653978 0.04855360 FALSE 0.5 0.04855360 FALSE 0.03249131 0.5742572 0.1200963 0.4180121 351607 4476 1953882 1953883 1 2 Same + + 0.000000 -0.57551057 0 6.581779e-01 NA 1.583899 2.771687 0.9927339 2898 Uncharacterized conserved protein [Function unknown] S protein of unknown function DUF470 1.539490 2.689531 0.9592070 294 Dihydropteroate synthase and related enzymes [Coenzyme metabolism] H dihydropteroate synthase TRUE TRUE 52 TRUE 0.614643 1.2270417 0.4091255 1.013258 0.8255205 U 0.7711970 0.6309408 9.64 0.62396977 0.3465480 0.7090071 0.46808962 FALSE 0.5 0.46808962 FALSE 0.31405314 0.6309408 0.2162474 0.4765357 351607 4476 1953883 1953884 1 -3 Same + + 14.507657 2.94754538 0 2.899665e+01 3.0 1.539490 2.689531 0.9592070 294 Dihydropteroate synthase and related enzymes [Coenzyme metabolism] H dihydropteroate synthase 1.541415 2.675109 0.9876131 801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism] H 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase H TRUE TRUE 53 TRUE 3.630063 2.3691442 1.7286536 1.013258 3.2269548 Y 2.6122461 0.9691677 4.46 0.83976334 0.9644603 0.8849946 0.99301782 TRUE 0.5 0.99301782 TRUE 0.96651615 0.9691677 0.8463384 0.9436244 351607 4476 1953884 1953885 1 -3 Same + + 0.000000 2.94754538 0 2.947545e+00 NA 1.541415 2.675109 0.9876131 801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism] H 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1.597559 2.836422 1.0275722 - - - hypothetical protein TRUE TRUE 54 TRUE 0.614643 1.4591189 1.7286536 1.013258 0.8255205 U 0.7711970 0.7652453 4.46 0.83976334 0.6572956 0.8849946 0.90951551 TRUE 0.5 0.90951551 TRUE 0.81357758 0.7652453 0.4543668 0.6344776 351607 4476 1953885 1953886 1 76 Same + + 0.000000 -11.79254650 0 -1.179255e+01 NA 1.597559 2.836422 1.0275722 - - - hypothetical protein 1.650811 2.978801 1.0521647 5495 Uncharacterized conserved protein [Function unknown] S hypothetical protein TRUE TRUE 55 TRUE 0.614643 0.5304719 0.6012271 1.013258 0.8255205 U 0.7711970 0.6059200 21.09 0.45489072 0.2734335 0.5506272 0.23899442 FALSE 0.5 0.23899442 FALSE 0.14906396 0.6059200 0.1734986 0.4501691 351607 4476 1953886 1953887 1 -3 Same + + 24.902540 26.37074754 0 5.557183e+01 146.7 1.650811 2.978801 1.0521647 5495 Uncharacterized conserved protein [Function unknown] S hypothetical protein 1.427661 2.445478 0.9166544 414 Panthothenate synthetase [Coenzyme metabolism] H pantoate--beta-alanine ligase TRUE TRUE 56 TRUE 3.928077 2.8040956 2.7208384 1.013258 1.0237197 U 0.7711970 0.9684157 4.46 0.83976334 0.9635653 0.8849946 0.99283663 TRUE 0.5 0.99283663 TRUE 0.96613775 0.9684157 0.8448199 0.9422866 351607 4476 1953887 1953888 1 3 Same + + 91.281919 19.00226737 0 5.628631e+02 146.7 1.427661 2.445478 0.9166544 414 Panthothenate synthetase [Coenzyme metabolism] H pantoate--beta-alanine ligase 1.814421 3.093677 1.0563762 853 Aspartate 1-decarboxylase [Coenzyme metabolism] H aspartate 1-decarboxylase H TRUE TRUE 57 TRUE 4.267891 3.8591503 2.4696024 1.013258 1.0237197 Y 2.6122461 0.9856182 10.07 0.61817085 0.9836991 0.7038973 0.98986819 TRUE 0.5 0.98986819 TRUE 0.92211092 0.9856182 0.8796996 0.9733284 351607 4476 1953888 1953889 1 195 Same + + 19.912335 -5.14804314 0 -9.767035e-01 146.7 1.814421 3.093677 1.0563762 853 Aspartate 1-decarboxylase [Coenzyme metabolism] H aspartate 1-decarboxylase 1.511851 2.682369 0.9479805 29 Aspartate oxidase [Coenzyme metabolism] H L-aspartate oxidase H TRUE TRUE 58 TRUE 3.819269 0.3381430 0.4799367 1.013258 1.0237197 Y 2.6122461 0.8997178 28.07 0.17408319 0.8754844 0.2363445 0.59709737 TRUE 0.5 0.59709737 TRUE 0.33870500 0.8997178 0.7084546 0.8269139 351607 4476 1953889 1953890 1 9 Same + + 93.261223 33.69746739 0 4.564184e+02 8.0 1.511851 2.682369 0.9479805 29 Aspartate oxidase [Coenzyme metabolism] H L-aspartate oxidase 1.713072 3.015995 1.0353885 157 Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism] H nicotinate-nucleotide pyrophosphorylase H TRUE TRUE 59 TRUE 4.268098 3.7600004 3.1745670 1.013258 3.0420286 Y 2.6122461 0.9911611 12.11 0.68617927 0.9900377 0.7625030 0.99541902 TRUE 0.5 0.99541902 TRUE 0.94701656 0.9911611 0.8910023 0.9835288 351607 4476 1953890 1953891 1 27 Same + + 52.679342 1.26281625 0 8.706205e+00 146.7 1.713072 3.015995 1.0353885 157 Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism] H nicotinate-nucleotide pyrophosphorylase 1.735539 2.969802 1.0312647 1521 Putative transcriptional regulator, homolog of Bvg accessory factor [Transcription] K putative transcriptional acitvator, Baf family - TRUE TRUE 60 TRUE 4.187669 1.7475937 1.4938180 1.013258 1.0237197 N 0.8991512 0.9391692 15.91 0.66062845 0.9276421 0.7408191 0.96147339 TRUE 0.5 0.96147339 TRUE 0.87742485 0.9391692 0.7862001 0.8915544 351607 4476 1953891 1953892 1 33 Same + + 23.360241 8.74820709 0 -3.018403e-01 146.7 1.735539 2.969802 1.0312647 1521 Putative transcriptional regulator, homolog of Bvg accessory factor [Transcription] K putative transcriptional acitvator, Baf family 1.603080 2.749477 0.9711923 1190 Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] J lysyl-tRNA synthetase - TRUE TRUE 61 TRUE 3.895418 0.3540099 2.0910768 1.013258 1.0237197 N 0.8991512 0.9237057 16.70 0.64168042 0.9077291 0.7244811 0.94628657 TRUE 0.5 0.94628657 TRUE 0.84697679 0.9237057 0.7555469 0.8657176 351607 4476 1953892 1953893 1 9 Same + + 0.000000 -8.67181699 0 -8.882617e+00 146.7 1.603080 2.749477 0.9711923 1190 Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] J lysyl-tRNA synthetase 1.731046 2.921608 0.9849796 1246 N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] E GCN5-related N-acetyltransferase - TRUE TRUE 62 TRUE 0.614643 0.4920341 0.5542136 1.013258 1.0237197 N 0.8991512 0.6113178 12.11 0.68617927 0.2897131 0.7625030 0.47141601 FALSE 0.5 0.47141601 FALSE 0.32827873 0.6113178 0.1826796 0.4557842 351607 4476 1953893 1953894 1 463 Same + + 0.000000 -6.66660362 0 -6.666604e+00 NA 1.731046 2.921608 0.9849796 1246 N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] E GCN5-related N-acetyltransferase 1.683097 2.990199 1.0686636 - - - putative Lsr2-like protein TRUE TRUE 63 TRUE 0.614643 0.4467791 0.5118065 1.013258 0.8255205 U 0.7711970 0.5909377 32.42 0.09629286 0.2266896 0.1352896 0.03028911 FALSE 0.5 0.03028911 FALSE 0.01819181 0.5909377 0.1481338 0.4347891 351607 4476 1953898 1953899 1 -3 Same + + 20.874342 0.00000000 0 1.449167e+01 37.0 1.547753 2.720888 0.9831630 2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms] NT response regulator receiver modulated CheB methylesterase 1.636540 2.842672 0.9945303 1352 Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] NT MCP methyltransferase, CheR-type NT TRUE TRUE 64 TRUE 3.837081 1.9367077 0.7388830 1.013258 2.4222771 Y 2.6122461 0.9477593 4.46 0.83976334 0.9384232 0.8849946 0.98763428 TRUE 0.5 0.98763428 TRUE 0.95537049 0.9477593 0.8033296 0.9061968 351607 4476 1953899 1953900 1 112 Same + + 2.871680 0.00000000 0 2.871680e+00 37.0 1.636540 2.842672 0.9945303 1352 Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] NT MCP methyltransferase, CheR-type 1.772644 3.153435 1.0935677 835 Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms] NT CheW protein NT TRUE TRUE 65 TRUE 2.765500 1.4437699 0.7388830 1.013258 2.4222771 Y 2.6122461 0.9093412 24.00 0.31305346 0.8886246 0.4008924 0.78429703 TRUE 0.5 0.78429703 TRUE 0.54859254 0.9093412 0.7272804 0.8422992 351607 4476 1953900 1953901 1 80 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.772644 3.153435 1.0935677 835 Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms] NT CheW protein 1.501212 2.568856 0.9068929 - - - protein of unknown function DUF1222 TRUE TRUE 66 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 21.46 0.43913217 0.3364722 0.5348060 0.28419641 FALSE 0.5 0.28419641 FALSE 0.17237307 0.6273706 0.2101176 0.4727201 351607 4476 1953901 1953902 1 11 Same + + 0.000000 -5.04504539 0 -5.045045e+00 NA 1.501212 2.568856 0.9068929 - - - protein of unknown function DUF1222 1.827995 3.171237 1.0656129 - - - hypothetical protein TRUE TRUE 67 TRUE 0.614643 0.4134877 0.4773528 1.013258 0.8255205 U 0.7711970 0.5850486 12.82 0.68951817 0.2076604 0.7653076 0.36790415 FALSE 0.5 0.36790415 FALSE 0.26262632 0.5850486 0.1382108 0.4288248 351607 4476 1953904 1953905 1 101 Same + + 38.073164 27.63331024 0 1.556429e+02 146.7 1.671459 2.980119 1.0278885 1066 Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] O DNA repair protein RadA 1.529806 2.684432 0.9659988 1623 Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] R protein of unknown function DUF147 TRUE TRUE 68 TRUE 4.105540 3.2417427 2.7853778 1.013258 1.0237197 U 0.7711970 0.9745957 23.20 0.35986247 0.9708801 0.4521898 0.94934916 TRUE 0.5 0.94934916 TRUE 0.77157271 0.9745957 0.8573160 0.9533328 351607 4476 1953905 1953906 1 8 Same + + 0.000000 -0.91451925 0 -1.153999e+00 146.7 1.529806 2.684432 0.9659988 1623 Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] R protein of unknown function DUF147 1.494677 2.522460 0.9062895 4992 Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] E aminotransferase class-III TRUE TRUE 69 TRUE 0.614643 0.3394343 0.4030370 1.013258 1.0237197 U 0.7711970 0.5771221 11.83 0.68019111 0.1814346 0.7574564 0.32038399 FALSE 0.5 0.32038399 FALSE 0.23286497 0.5771221 0.1248968 0.4208681 351607 4476 1953907 1953908 1 47 Same - - 0.000000 -5.12284775 0 -5.327957e+00 146.7 1.567395 2.697029 0.9561451 1 Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism] H glutamate-1-semialdehyde-2,1-aminomutase 1.388648 2.373624 0.8798130 - - - phosphoesterase FALSE TRUE 69 TRUE 0.614643 0.4184577 0.4788980 1.013258 1.0237197 U 0.7711970 0.5905074 18.27 0.56290172 0.2253118 0.6540934 0.27248950 FALSE 0.5 0.27248950 FALSE 0.18210775 0.5905074 0.1474077 0.4343517 351607 4476 1953908 1953909 1 291 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.388648 2.373624 0.8798130 - - - phosphoesterase 1.604334 2.671239 0.9501072 - - - hypothetical protein FALSE TRUE 68 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 30.62 0.12206290 0.3364722 0.1695381 0.06586007 FALSE 0.5 0.06586007 FALSE 0.03566548 0.6273706 0.2101176 0.4727201 351607 4476 1953909 1953910 1 3 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.604334 2.671239 0.9501072 - - - hypothetical protein 1.644827 2.830871 0.9434131 1011 Predicted hydrolase (HAD superfamily) [General function prediction only] R HAD-superfamily hydrolase, subfamily IA, variant 3 FALSE TRUE 67 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 10.07 0.61817085 0.3364722 0.7038973 0.45084335 FALSE 0.5 0.45084335 FALSE 0.30102433 0.6273706 0.2101176 0.4727201 351607 4476 1953910 1953911 1 0 Same - - 0.000000 -1.32422547 0 -2.249009e+00 146.7 1.644827 2.830871 0.9434131 1011 Predicted hydrolase (HAD superfamily) [General function prediction only] R HAD-superfamily hydrolase, subfamily IA, variant 3 1.591533 2.732251 0.9854732 113 Delta-aminolevulinic acid dehydratase [Coenzyme metabolism] H Porphobilinogen synthase FALSE TRUE 66 TRUE 0.614643 0.3566537 0.4031278 1.013258 1.0237197 U 0.7711970 0.5782824 7.97 0.67109322 0.1853184 0.7497479 0.31700100 FALSE 0.5 0.31700100 FALSE 0.22863502 0.5782824 0.1268427 0.4220278 351607 4476 1953911 1953912 1 83 Same - - 43.469151 25.96209319 0 6.104047e+01 5.0 1.591533 2.732251 0.9854732 113 Delta-aminolevulinic acid dehydratase [Coenzyme metabolism] H Porphobilinogen synthase 1.463563 2.519622 0.9060121 1587 Uroporphyrinogen-III synthase [Coenzyme metabolism] H Uroporphyrinogen III synthase HEM4 H FALSE TRUE 65 TRUE 4.136527 2.8286455 2.6805914 1.013258 3.1692029 Y 2.6122461 0.9852810 21.79 0.42499813 0.9833112 0.5204500 0.97755312 TRUE 0.5 0.97755312 TRUE 0.84301416 0.9852810 0.8790130 0.9727111 351607 4476 1953912 1953913 1 -3 Same - - 60.405157 27.93645697 0 1.105831e+02 146.7 1.463563 2.519622 0.9060121 1587 Uroporphyrinogen-III synthase [Coenzyme metabolism] H Uroporphyrinogen III synthase HEM4 1.502499 2.665671 0.9793682 181 Porphobilinogen deaminase [Coenzyme metabolism] H porphobilinogen deaminase H FALSE TRUE 64 TRUE 4.224407 3.1042397 2.8128496 1.013258 1.0237197 Y 2.6122461 0.9845312 4.46 0.83976334 0.9824478 0.8849946 0.99660257 TRUE 0.5 0.99660257 TRUE 0.97405051 0.9845312 0.8774868 0.9713396 351607 4476 1953913 1953914 1 -3 Same - - 111.380590 26.82168949 0 3.002662e+02 7.0 1.502499 2.665671 0.9793682 181 Porphobilinogen deaminase [Coenzyme metabolism] H porphobilinogen deaminase 1.459526 2.556136 0.9265557 373 Glutamyl-tRNA reductase [Coenzyme metabolism] H glutamyl-tRNA reductase H FALSE TRUE 63 TRUE 4.266682 3.5709488 2.7445001 1.013258 3.0882322 Y 2.6122461 0.9888210 4.46 0.83976334 0.9873703 0.8849946 0.99756523 TRUE 0.5 0.99756523 TRUE 0.97608941 0.9888210 0.8862267 0.9792104 351607 4476 1953914 1953915 1 -3 Same - - 0.000000 1.84745106 0 1.847451e+00 126.0 1.459526 2.556136 0.9265557 373 Glutamyl-tRNA reductase [Coenzyme metabolism] H glutamyl-tRNA reductase 1.535028 2.661993 0.9574754 2344 AT-rich DNA-binding protein [General function prediction only] R CoA-binding domain protein FALSE TRUE 62 TRUE 0.614643 1.3500983 1.5517873 1.013258 1.0080055 U 0.7711970 0.7488846 4.46 0.83976334 0.6254027 0.8849946 0.89743210 TRUE 0.5 0.89743210 TRUE 0.79451464 0.7488846 0.4245527 0.6136050 351607 4476 1953915 1953916 1 128 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.535028 2.661993 0.9574754 2344 AT-rich DNA-binding protein [General function prediction only] R CoA-binding domain protein 1.562291 2.704459 0.9809478 - - - hypothetical protein FALSE TRUE 61 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 24.89 0.26896680 0.3364722 0.3507517 0.15723769 FALSE 0.5 0.15723769 FALSE 0.08914760 0.6273706 0.2101176 0.4727201 351607 4476 1953916 1953917 1 30 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.562291 2.704459 0.9809478 - - - hypothetical protein 1.663015 2.854646 1.0607486 - - - glutaredoxin 2 FALSE TRUE 60 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 16.37 0.65072669 0.3364722 0.7323090 0.48579871 FALSE 0.5 0.48579871 FALSE 0.33137305 0.6273706 0.2101176 0.4727201 351607 4476 1953919 1953920 1 125 Same - - 0.000000 9.31233994 0 9.312340e+00 NA 1.369632 2.238032 1.0117346 - - - Protein of unknown function DUF1713 1.525774 2.647057 1.0167738 - - - DNA binding domain, excisionase family FALSE TRUE 59 TRUE 0.614643 1.7839220 2.1193177 1.013258 0.8255205 U 0.7711970 0.8088988 24.71 0.27632847 0.7360781 0.3592518 0.51572873 TRUE 0.5 0.51572873 TRUE 0.30527938 0.8088988 0.5350586 0.6926823 351607 4476 1953920 1953921 1 276 Same - - 0.000000 0.84218276 0 8.421828e-01 NA 1.525774 2.647057 1.0167738 - - - DNA binding domain, excisionase family 1.633328 2.771661 0.9986424 - - - hypothetical protein FALSE TRUE 58 TRUE 0.614643 1.2423539 1.4057045 1.013258 0.8255205 U 0.7711970 0.7270858 30.27 0.12799354 0.5806790 0.1773096 0.16892634 FALSE 0.5 0.16892634 FALSE 0.08421435 0.7270858 0.3851844 0.5865463 351607 4476 1953921 1953922 1 14 Same - - 0.000000 -0.07233649 0 -7.233649e-02 NA 1.633328 2.771661 0.9986424 - - - hypothetical protein 1.555455 2.645290 0.9609699 123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] BQ histone deacetylase superfamily FALSE TRUE 57 TRUE 0.614643 0.3684079 0.4388381 1.013258 0.8255205 U 0.7711970 0.5779113 13.71 0.68524379 0.1840778 0.7617160 0.32938142 FALSE 0.5 0.32938142 FALSE 0.23924473 0.5779113 0.1262201 0.4216567 351607 4476 1953922 1953923 1 -3 Same - - 3.258097 -4.09395018 0 -1.234244e+01 NA 1.555455 2.645290 0.9609699 123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] BQ histone deacetylase superfamily 1.591740 2.838773 0.9810614 345 Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] E pyrroline-5-carboxylate reductase - FALSE TRUE 56 TRUE 2.847637 0.5348310 0.4573144 1.013258 0.8255205 N 0.8991512 0.7949407 4.46 0.83976334 0.7118285 0.8849946 0.92829238 TRUE 0.5 0.92829238 TRUE 0.84458832 0.7949407 0.5090749 0.6736603 351607 4476 1953923 1953924 1 -3 Same - - 0.000000 -8.27505752 0 -8.921124e+00 146.7 1.591740 2.838773 0.9810614 345 Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] E pyrroline-5-carboxylate reductase 1.509469 2.641879 0.9568610 506 Proline dehydrogenase [Amino acid transport and metabolism] E Proline dehydrogenase E FALSE TRUE 55 TRUE 0.614643 0.4928050 0.5455924 1.013258 1.0237197 Y 2.6122461 0.7103027 4.46 0.83976334 0.5443753 0.8849946 0.86228956 TRUE 0.5 0.86228956 TRUE 0.74268685 0.7103027 0.3551477 0.5662760 351607 4476 1953924 1953925 1 90 Same - - 0.000000 -8.81571452 0 -7.395804e+00 146.7 1.509469 2.641879 0.9568610 506 Proline dehydrogenase [Amino acid transport and metabolism] E Proline dehydrogenase 1.468164 2.586630 0.9363580 1082 Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism] G Xylose isomerase domain protein TIM barrel - FALSE TRUE 54 TRUE 0.614643 0.4607564 0.5564092 1.013258 1.0237197 N 0.8991512 0.6095110 22.17 0.40850746 0.2842960 0.5034988 0.21527960 FALSE 0.5 0.21527960 FALSE 0.13133888 0.6095110 0.1796039 0.4539003 351607 4476 1953926 1953927 1 106 Same + + 0.000000 26.71489480 0 2.671489e+01 NA 1.504363 2.646741 0.9241961 406 Fructose-2,6-bisphosphatase [Carbohydrate transport and metabolism] G Phosphoglycerate mutase 1.586345 2.768153 1.0087225 1225 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] O Redoxin domain protein - TRUE TRUE 54 TRUE 0.614643 2.3186996 2.7377258 1.013258 0.8255205 N 0.8991512 0.8693752 23.54 0.34022458 0.8321487 0.4309051 0.71882468 TRUE 0.5 0.71882468 TRUE 0.48882854 0.8693752 0.6496726 0.7799310 351607 4476 1953927 1953928 1 -3 Same + + 21.038036 32.94000842 0 5.557070e+01 146.7 1.586345 2.768153 1.0087225 1225 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] O Redoxin domain protein 1.712821 3.109874 1.0715393 785 Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones] O cytochrome c biogenesis protein, transmembrane region O TRUE TRUE 55 TRUE 3.844124 2.8000189 3.1154501 1.013258 1.0237197 Y 2.6122461 0.9827248 4.46 0.83976334 0.9803620 0.8849946 0.99619233 TRUE 0.5 0.99619233 TRUE 0.97318363 0.9827248 0.8738120 0.9680427 351607 4476 1953928 1953929 1 -3 Same + + 14.363956 34.82070755 0 7.182103e+01 NA 1.712821 3.109874 1.0715393 785 Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones] O cytochrome c biogenesis protein, transmembrane region 1.713166 2.970372 1.0210673 1333 ResB protein required for cytochrome c biosynthesis [Posttranslational modification, protein turnover, chaperones] O ResB family protein O TRUE TRUE 56 TRUE 3.617667 2.9199665 3.2305996 1.013258 0.8255205 Y 2.6122461 0.9821455 4.46 0.83976334 0.9796915 0.8849946 0.99606016 TRUE 0.5 0.99606016 TRUE 0.97290460 0.9821455 0.8726343 0.9669876 351607 4476 1953929 1953930 1 -10 Same + + 0.000000 16.49234818 0 1.637374e+01 NA 1.713166 2.970372 1.0210673 1333 ResB protein required for cytochrome c biosynthesis [Posttranslational modification, protein turnover, chaperones] O ResB family protein 1.493035 2.665221 0.9581537 755 ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones] O cytochrome c assembly protein O TRUE TRUE 57 TRUE 0.614643 1.9946991 2.3823852 1.013258 0.8255205 Y 2.6122461 0.8906712 0.76 0.87579553 0.8628729 0.9119225 0.97795899 TRUE 0.5 0.97795899 TRUE 0.94032110 0.8906712 0.6908379 0.8126671 351607 4476 1953930 1953931 1 76 Same + + 0.000000 -0.75845939 0 1.736885e+00 NA 1.493035 2.665221 0.9581537 755 ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones] O cytochrome c assembly protein 1.532349 2.509755 0.9159408 43 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism] H UbiD family decarboxylases - TRUE TRUE 58 TRUE 0.614643 1.3194203 0.4052357 1.013258 0.8255205 N 0.8991512 0.6441152 21.09 0.45489072 0.3827628 0.5506272 0.34101661 FALSE 0.5 0.34101661 FALSE 0.20761683 0.6441152 0.2389542 0.4907734 351607 4476 1953931 1953932 1 59 Same + + 42.856526 6.40774316 0 4.989557e+01 NA 1.532349 2.509755 0.9159408 43 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism] H UbiD family decarboxylases 1.604328 2.810110 1.0141417 382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism] H 4-hydroxybenzoate polyprenyltransferase, putative H TRUE TRUE 59 TRUE 4.134412 2.7594833 1.9970028 1.013258 0.8255205 Y 2.6122461 0.9744257 19.49 0.51543734 0.9706802 0.6096648 0.97238795 TRUE 0.5 0.97238795 TRUE 0.86437724 0.9744257 0.8569718 0.9530274 351607 4476 1953932 1953933 1 -3 Same + + 36.724734 6.40774316 0 6.195727e+01 146.7 1.604328 2.810110 1.0141417 382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism] H 4-hydroxybenzoate polyprenyltransferase, putative 1.533247 2.749496 0.9798558 163 3-polyprenyl-4-hydroxybenzoate decarboxylase [Coenzyme metabolism] H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase H TRUE TRUE 60 TRUE 4.088944 2.8450973 1.9970028 1.013258 1.0237197 Y 2.6122461 0.9750296 4.46 0.83976334 0.9713903 0.8849946 0.99441155 TRUE 0.5 0.99441155 TRUE 0.96943464 0.9750296 0.8581949 0.9541128 351607 4476 1953935 1953936 1 -3 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.453673 2.379433 0.8721093 1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only] HR hypothetical protein 1.668842 3.011367 1.0676164 - - - hypothetical protein TRUE TRUE 61 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 4.46 0.83976334 0.3364722 0.8849946 0.72659456 TRUE 0.5 0.72659456 TRUE 0.58230716 0.6273706 0.2101176 0.4727201 351607 4476 1953936 1953937 1 -3 Same + + 0.000000 0.00000000 0 0.000000e+00 NA 1.668842 3.011367 1.0676164 - - - hypothetical protein 1.642513 2.903581 1.0104542 1427 Predicted periplasmic solute-binding protein [General function prediction only] R protein of unknown function DUF178 TRUE TRUE 62 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 4.46 0.83976334 0.3364722 0.8849946 0.72659456 TRUE 0.5 0.72659456 TRUE 0.58230716 0.6273706 0.2101176 0.4727201 351607 4476 1953937 1953938 1 96 Same + + 0.000000 -0.52372903 0 -5.237290e-01 NA 1.642513 2.903581 1.0104542 1427 Predicted periplasmic solute-binding protein [General function prediction only] R protein of unknown function DUF178 1.493215 2.664553 1.0148510 784 FOG: CheY-like receiver [Signal transduction mechanisms] T response regulator receiver protein TRUE TRUE 63 TRUE 0.614643 0.3414512 0.4123176 1.013258 0.8255205 U 0.7711970 0.5732511 22.80 0.38033572 0.1683633 0.4740261 0.11052448 FALSE 0.5 0.11052448 FALSE 0.07616173 0.5732511 0.1184120 0.4170117 351607 4476 1953938 1953939 1 183 Same + + 0.000000 -0.52372903 0 -5.237290e-01 146.7 1.493215 2.664553 1.0148510 784 FOG: CheY-like receiver [Signal transduction mechanisms] T response regulator receiver protein 1.501570 2.546217 0.9006101 1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only] HR hypothetical protein - TRUE TRUE 64 TRUE 0.614643 0.3414512 0.4123176 1.013258 1.0237197 N 0.8991512 0.5863863 27.65 0.18487021 0.2120164 0.2498225 0.05751322 FALSE 0.5 0.05751322 FALSE 0.03573804 0.5863863 0.1404625 0.4301756 351607 4476 1953939 1953940 1 -3 Same + + 0.000000 -0.64636626 0 -8.087928e-01 146.7 1.501570 2.546217 0.9006101 1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only] HR hypothetical protein 1.645859 2.818635 0.9597266 1816 Adenosine deaminase [Nucleotide transport and metabolism] F adenosine deaminase - TRUE TRUE 65 TRUE 0.614643 0.3379736 0.4076522 1.013258 1.0237197 N 0.8991512 0.5856562 4.46 0.83976334 0.2096413 0.8849946 0.58160836 TRUE 0.5 0.58160836 TRUE 0.45879273 0.5856562 0.1392334 0.4294381 351607 4476 1953940 1953941 1 -3 Same + + 6.305667 -5.72764381 0 -6.907188e+00 146.7 1.645859 2.818635 0.9597266 1816 Adenosine deaminase [Nucleotide transport and metabolism] F adenosine deaminase 1.336342 2.390931 0.9188446 2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] H ubiquinone/menaquinone biosynthesis methyltransferases - TRUE TRUE 66 TRUE 3.184613 0.4526672 0.4895918 1.013258 1.0237197 N 0.8991512 0.8192230 4.46 0.83976334 0.7534829 0.8849946 0.94124035 TRUE 0.5 0.94124035 TRUE 0.86702320 0.8192230 0.5543896 0.7070110 351607 4476 1953941 1953942 1 166 Same + + 0.000000 -1.87135972 0 -9.454406e-01 146.7 1.336342 2.390931 0.9188446 2226 Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] H ubiquinone/menaquinone biosynthesis methyltransferases 1.524462 2.646655 0.9690388 644 Dehydrogenases (flavoproteins) [Energy production and conversion] C geranylgeranyl reductase - TRUE TRUE 67 TRUE 0.614643 0.3380573 0.4092524 1.013258 1.0237197 N 0.8991512 0.5858330 27.13 0.19916428 0.2102169 0.2674906 0.06208561 FALSE 0.5 0.06208561 FALSE 0.03876440 0.5858330 0.1395309 0.4296166 351607 4476 1953942 1953943 1 108 Same + + 2.833213 -4.20571670 0 -8.639415e+00 146.7 1.524462 2.646655 0.9690388 644 Dehydrogenases (flavoproteins) [Energy production and conversion] C geranylgeranyl reductase 1.401107 2.259691 0.9298832 838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion] C NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C TRUE TRUE 68 TRUE 2.754836 0.4882097 0.4622763 1.013258 1.0237197 Y 2.6122461 0.8548097 23.73 0.32893004 0.8102533 0.4185097 0.67669591 TRUE 0.5 0.67669591 TRUE 0.44621015 0.8548097 0.6217618 0.7581663 351607 4476 1953943 1953944 1 4 Same + + 174.093314 24.44829084 0 7.540160e+02 11.0 1.401107 2.259691 0.9298832 838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion] C NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 1.461161 2.458790 0.9254528 377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases [Energy production and conversion] C NADH-quinone oxidoreductase, B subunit C TRUE TRUE 69 TRUE 4.225651 3.9953260 2.6341432 1.013258 2.7904363 Y 2.6122461 0.9890319 10.55 0.62407175 0.9876112 0.7090968 0.99250030 TRUE 0.5 0.99250030 TRUE 0.92850209 0.9890319 0.8866568 0.9795988 351607 4476 1953944 1953945 1 -3 Same + + 52.689600 15.09789181 0 1.998139e+02 11.0 1.461161 2.458790 0.9254528 377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases [Energy production and conversion] C NADH-quinone oxidoreductase, B subunit 1.664167 2.730984 0.9697369 852 NADH:ubiquinone oxidoreductase 27 kD subunit [Energy production and conversion] C NADH (or F420H2) dehydrogenase, subunit C C TRUE TRUE 70 TRUE 4.189339 3.3554182 2.3426256 1.013258 2.7904363 Y 2.6122461 0.9849680 4.46 0.83976334 0.9829510 0.8849946 0.99670134 TRUE 0.5 0.99670134 TRUE 0.97425939 0.9849680 0.8783759 0.9721384 351607 4476 1953945 1953946 1 43 Same + + 60.955662 19.74831137 0 2.301549e+02 146.7 1.664167 2.730984 0.9697369 852 NADH:ubiquinone oxidoreductase 27 kD subunit [Energy production and conversion] C NADH (or F420H2) dehydrogenase, subunit C 1.433084 2.348481 0.8491692 649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 [Energy production and conversion] C NADH dehydrogenase I, D subunit C TRUE TRUE 71 TRUE 4.225656 3.4294572 2.4917498 1.013258 1.0237197 Y 2.6122461 0.9837192 17.83 0.58661966 0.9815111 0.6757137 0.98689969 TRUE 0.5 0.98689969 TRUE 0.90917230 0.9837192 0.8758345 0.9698563 351607 4476 1953946 1953947 1 -3 Same + + 6.906755 26.33557686 0 5.533393e+01 146.7 1.433084 2.348481 0.8491692 649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 [Energy production and conversion] C NADH dehydrogenase I, D subunit 1.508790 2.581828 0.9132820 1905 NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion] C NADH-quinone oxidoreductase, E subunit C TRUE TRUE 72 TRUE 3.272052 2.7939116 2.7124206 1.013258 1.0237197 Y 2.6122461 0.9738489 4.46 0.83976334 0.9700011 0.8849946 0.99413346 TRUE 0.5 0.99413346 TRUE 0.96885120 0.9738489 0.8558039 0.9519917 351607 4476 1953947 1953948 1 -3 Same + + 6.906755 26.33557686 0 5.533393e+01 11.0 1.508790 2.581828 0.9132820 1905 NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion] C NADH-quinone oxidoreductase, E subunit 1.492178 2.493141 0.8951098 1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion] C NADH-quinone oxidoreductase, F subunit C TRUE TRUE 73 TRUE 3.272052 2.7939116 2.7124206 1.013258 2.7904363 Y 2.6122461 0.9781183 4.46 0.83976334 0.9750084 0.8849946 0.99513287 TRUE 0.5 0.99513287 TRUE 0.97095049 0.9781183 0.8644562 0.9596819 351607 4476 1953948 1953949 1 0 Same + + 96.534845 29.07018345 0 5.564409e+02 11.0 1.492178 2.493141 0.8951098 1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion] C NADH-quinone oxidoreductase, F subunit 1.513165 2.620030 0.9369871 1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [Energy production and conversion] C NADH-quinone oxidoreductase, chain G C TRUE TRUE 74 TRUE 4.268277 3.8541579 2.8892992 1.013258 2.7904363 Y 2.6122461 0.9899868 7.97 0.67109322 0.9887007 0.7497479 0.99443006 TRUE 0.5 0.99443006 TRUE 0.94211693 0.9899868 0.8886050 0.9813595 351607 4476 1953949 1953950 1 4 Same + + 66.200494 27.76844648 0 3.824060e+02 146.7 1.513165 2.620030 0.9369871 1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [Energy production and conversion] C NADH-quinone oxidoreductase, chain G 1.567786 2.700906 0.9418442 1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion] C respiratory-chain NADH dehydrogenase, subunit 1 C TRUE TRUE 75 TRUE 4.235025 3.7109814 2.7990917 1.013258 1.0237197 Y 2.6122461 0.9868485 10.55 0.62407175 0.9851121 0.7090968 0.99097844 TRUE 0.5 0.99097844 TRUE 0.92555623 0.9868485 0.8822055 0.9755840 351607 4476 1953950 1953951 1 -7 Same + + 15.611899 27.70626923 0 7.507871e+01 115.0 1.567786 2.700906 0.9418442 1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion] C respiratory-chain NADH dehydrogenase, subunit 1 1.544981 2.472838 0.8432552 1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion] C NADH-quinone oxidoreductase, chain I C TRUE TRUE 76 TRUE 3.662682 2.9410029 2.7922293 1.013258 1.1902920 Y 2.6122461 0.9797050 1.12 0.87456119 0.9768580 0.9110107 0.99661361 TRUE 0.5 0.99661361 TRUE 0.97859454 0.9797050 0.8676763 0.9625542 351607 4476 1953951 1953952 1 -3 Same + + 0.000000 25.55626373 0 2.555626e+01 146.7 1.544981 2.472838 0.8432552 1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion] C NADH-quinone oxidoreductase, chain I 1.482678 2.587404 0.9500483 839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Energy production and conversion] C NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 C TRUE TRUE 77 TRUE 0.614643 2.2831075 2.6639400 1.013258 1.0237197 Y 2.6122461 0.9106208 4.46 0.83976334 0.8903510 0.8849946 0.97704057 TRUE 0.5 0.97704057 TRUE 0.93401273 0.9106208 0.7297905 0.8443632 351607 4476 1953952 1953953 1 -3 Same + + 6.992096 27.84594742 0 5.501270e+01 11.0 1.482678 2.587404 0.9500483 839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Energy production and conversion] C NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 1.316205 2.302226 0.9657288 713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion] C NADH-ubiquinone oxidoreductase, chain 4L C TRUE TRUE 78 TRUE 3.295942 2.7837541 2.8059652 1.013258 2.7904363 Y 2.6122461 0.9791361 4.46 0.83976334 0.9761955 0.8849946 0.99536862 TRUE 0.5 0.99536862 TRUE 0.97144671 0.9791361 0.8665214 0.9615234 351607 4476 1953953 1953954 1 31 Same + + 199.103044 26.66035146 0 1.010895e+03 16.0 1.316205 2.302226 0.9657288 713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion] C NADH-ubiquinone oxidoreductase, chain 4L 1.463953 2.558847 0.9297573 1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism] CP proton-translocating NADH-quinone oxidoreductase, chain L C TRUE TRUE 79 TRUE 4.190779 4.1237575 2.7309625 1.013258 2.5901145 Y 2.6122461 0.9894810 16.52 0.64701211 0.9881239 0.7291009 0.99348566 TRUE 0.5 0.99348566 TRUE 0.93536123 0.9894810 0.8875730 0.9804266 351607 4476 1953954 1953955 1 6 Same + + 186.146655 29.09521999 0 1.046661e+03 5.0 1.463953 2.558847 0.9297573 1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion / Inorganic ion transport and metabolism] CP proton-translocating NADH-quinone oxidoreductase, chain L 1.385283 2.398389 0.8727153 1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion] C proton-translocating NADH-quinone oxidoreductase, chain M C TRUE TRUE 80 TRUE 4.209561 4.1601168 2.8945597 1.013258 3.1692029 Y 2.6122461 0.9909327 11.28 0.65690447 0.9897779 0.7376256 0.99463489 TRUE 0.5 0.99463489 TRUE 0.93967326 0.9909327 0.8905359 0.9831065 351607 4476 1953955 1953956 1 0 Same + + 125.133836 29.09521999 0 6.355932e+02 5.0 1.385283 2.398389 0.8727153 1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion] C proton-translocating NADH-quinone oxidoreductase, chain M 1.482766 2.617778 0.9492989 1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion] C proton-translocating NADH-quinone oxidoreductase, chain N C TRUE TRUE 81 TRUE 4.262689 3.9344764 2.8945597 1.013258 3.1692029 Y 2.6122461 0.9905745 7.97 0.67109322 0.9893702 0.7497479 0.99476190 TRUE 0.5 0.99476190 TRUE 0.94277737 0.9905745 0.8898046 0.9824446 351607 4476 1953956 1953957 1 36 Same + + 0.000000 1.04382185 0 -8.190741e+00 146.7 1.482766 2.617778 0.9492989 1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion] C proton-translocating NADH-quinone oxidoreductase, chain N 1.566083 2.768893 0.9906294 142 Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism] H Trans-hexaprenyltranstransferase - TRUE TRUE 82 TRUE 0.614643 0.4807104 1.4764158 1.013258 1.0237197 N 0.8991512 0.7019072 16.98 0.63084993 0.5255636 0.7150419 0.65434833 TRUE 0.5 0.65434833 TRUE 0.46841925 0.7019072 0.3402105 0.5563138 351607 4476 1953958 1953959 1 -3 Same - - 0.000000 0.00000000 0 0.000000e+00 NA 1.777863 3.065328 1.0331049 - - - hypothetical protein 1.479905 2.479014 0.8868680 1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion] C thiamine pyrophosphate enzyme domain protein TPP-binding FALSE TRUE 82 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 4.46 0.83976334 0.3364722 0.8849946 0.72659456 TRUE 0.5 0.72659456 TRUE 0.58230716 0.6273706 0.2101176 0.4727201 351607 4476 1953959 1953960 1 -3 Same - - 41.325700 26.31316143 0 1.266862e+02 146.7 1.479905 2.479014 0.8868680 1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion] C thiamine pyrophosphate enzyme domain protein TPP-binding 1.406654 2.367453 0.8413287 674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Energy production and conversion] C pyruvate flavodoxin/ferredoxin oxidoreductase domain protein C FALSE TRUE 81 TRUE 4.125802 3.1437622 2.7073783 1.013258 1.0237197 Y 2.6122461 0.9833007 4.46 0.83976334 0.9810278 0.8849946 0.99632344 TRUE 0.5 0.99632344 TRUE 0.97346055 0.9833007 0.8749832 0.9690927 351607 4476 1953960 1953961 1 54 Same - - 0.000000 -3.15032166 0 -3.150322e+00 NA 1.406654 2.367453 0.8413287 674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Energy production and conversion] C pyruvate flavodoxin/ferredoxin oxidoreductase domain protein 1.465853 2.725532 0.9418564 - - - Twin-arginine translocation pathway signal FALSE TRUE 80 TRUE 0.614643 0.3773562 0.4386360 1.013258 0.8255205 U 0.7711970 0.5784872 19.10 0.52890603 0.1860024 0.6224329 0.20416799 FALSE 0.5 0.20416799 FALSE 0.14059990 0.5784872 0.1271863 0.4222326 351607 4476 1953961 1953962 1 11 Same - - 0.000000 -3.15032166 0 -3.150322e+00 NA 1.465853 2.725532 0.9418564 - - - Twin-arginine translocation pathway signal 1.283771 2.109279 0.8256477 1666 Uncharacterized protein conserved in bacteria [Function unknown] S protein of unknown function DUF520 FALSE TRUE 79 TRUE 0.614643 0.3773562 0.4386360 1.013258 0.8255205 U 0.7711970 0.5784872 12.82 0.68951817 0.1860024 0.7653076 0.33663402 FALSE 0.5 0.33663402 FALSE 0.24449310 0.5784872 0.1271863 0.4222326 351607 4476 1377826 1377827 1 720 Same + + 0.000000 0.00000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 79 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 33.00 0.08944498 0.3364722 0.1260553 0.04744910 FALSE 0.5 0.04744910 FALSE 0.02546521 0.6273706 0.2101176 0.4727201 351607 4476 1377827 1377828 1 9 Same + + 0.000000 0.00000000 0 0.000000e+00 NA NA NA NA NA NA NA TRUE TRUE 80 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 12.11 0.68617927 0.3364722 0.7625030 0.52579249 TRUE 0.5 0.52579249 TRUE 0.36774583 0.6273706 0.2101176 0.4727201 351607 4476 1377828 1953963 1 192 Same + + 0.000000 0.00000000 0 0.000000e+00 NA NA NA NA 1.326018 1.983498 0.9007360 267 Ribosomal protein L33 [Translation, ribosomal structure and biogenesis] J ribosomal protein L33 TRUE TRUE 81 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 27.97 0.17659028 0.3364722 0.2394882 0.09808578 FALSE 0.5 0.09808578 FALSE 0.05397040 0.6273706 0.2101176 0.4727201 351607 4476 1953963 1953964 1 10 Same + + 0.000000 -0.32367354 0 2.475628e+00 NA 1.326018 1.983498 0.9007360 267 Ribosomal protein L33 [Translation, ribosomal structure and biogenesis] J ribosomal protein L33 1.412550 2.424528 0.9136450 - - - hypothetical protein TRUE TRUE 82 TRUE 0.614643 1.4085546 0.4346348 1.013258 0.8255205 U 0.7711970 0.6450185 12.45 0.68882816 0.3851918 0.7647285 0.58104813 TRUE 0.5 0.58104813 TRUE 0.41212080 0.6450185 0.2405162 0.4917588 351607 4476 1953964 1953965 1 87 Same + + 3.496508 13.93734026 0 1.743385e+01 NA 1.412550 2.424528 0.9136450 - - - hypothetical protein 1.723144 2.978717 1.0657437 2030 Acyl dehydratase [Lipid metabolism] I MaoC domain protein dehydratase TRUE TRUE 83 TRUE 2.900106 2.0175320 2.3033272 1.013258 0.8255205 U 0.7711970 0.9285085 21.99 0.41635522 0.9139849 0.5115931 0.88345243 TRUE 0.5 0.88345243 TRUE 0.69904899 0.9285085 0.7650426 0.8736717 351607 4476 1953965 1953966 1 177 Same + + 0.000000 -1.22997785 0 -1.267718e+00 146.7 1.723144 2.978717 1.0657437 2030 Acyl dehydratase [Lipid metabolism] I MaoC domain protein dehydratase 1.657923 2.928363 1.0205697 1309 Transcriptional regulator [Transcription] K transcriptional regulator, TetR family - TRUE TRUE 84 TRUE 0.614643 0.3403871 0.4025994 1.013258 1.0237197 N 0.8991512 0.5852759 27.49 0.18915763 0.2084018 0.2551448 0.05786265 FALSE 0.5 0.05786265 FALSE 0.03617588 0.5852759 0.1385933 0.4290541 351607 4476 1953966 1953967 1 137 Same + + 0.000000 -2.48981242 0 -2.812001e+00 146.7 1.657923 2.928363 1.0205697 1309 Transcriptional regulator [Transcription] K transcriptional regulator, TetR family 1.566008 2.711905 0.9727441 812 UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] M UDP-N-acetylenolpyruvoylglucosamine reductase - TRUE TRUE 85 TRUE 0.614643 0.3699774 0.4215821 1.013258 1.0237197 N 0.8991512 0.5892689 25.45 0.24926197 0.2213359 0.3277414 0.08623869 FALSE 0.5 0.08623869 FALSE 0.05343633 0.5892689 0.1453192 0.4330944 351607 4476 1377835 1953969 1 19 Same + + 0.000000 0.00000000 0 0.000000e+00 NA NA NA NA 1.568847 2.654095 1.0244369 690 Preprotein translocase subunit SecE [Intracellular trafficking and secretion] U preprotein translocase, SecE subunit TRUE TRUE 86 TRUE 0.614643 0.6402337 0.7388830 1.013258 0.8255205 U 0.7711970 0.6273706 14.66 0.67794964 0.3364722 0.7555619 0.51632162 TRUE 0.5 0.51632162 TRUE 0.35896679 0.6273706 0.2101176 0.4727201 351607 4476 1953969 1953970 1 97 Same + + 28.296849 13.29872345 0 7.475214e+01 146.7 1.568847 2.654095 1.0244369 690 Preprotein translocase subunit SecE [Intracellular trafficking and secretion] U preprotein translocase, SecE subunit 1.353778 2.262827 0.8462952 250 Transcription antiterminator [Transcription] K NusG antitermination factor - TRUE TRUE 87 TRUE 3.977676 2.9367873 2.2823566 1.013258 1.0237197 N 0.8991512 0.9651290 22.89 0.37609167 0.9596368 0.4695288 0.93477522 TRUE 0.5 0.93477522 TRUE 0.75743167 0.9651290 0.8381898 0.9364593 351607 4476 1953970 1953971 1 100 Same + + 250.292485 40.94757138 0 1.328725e+03 146.7 1.353778 2.262827 0.8462952 250 Transcription antiterminator [Transcription] K NusG antitermination factor 1.467158 2.373053 0.8356183 80 Ribosomal protein L11 [Translation, ribosomal structure and biogenesis] J ribosomal protein L11 - TRUE TRUE 88 TRUE 4.144955 4.3019716 3.5670412 1.013258 1.0237197 N 0.8991512 0.9870343 23.13 0.36371003 0.9853253 0.4563208 0.97460676 TRUE 0.5 0.97460676 TRUE 0.81120152 0.9870343 0.8825843 0.9759252 351607 4476 1953971 1953972 1 172 Same + + 306.416247 41.86925296 0 1.619402e+03 54.0 1.467158 2.373053 0.8356183 80 Ribosomal protein L11 [Translation, ribosomal structure and biogenesis] J ribosomal protein L11 1.410974 2.361712 0.8755345 81 Ribosomal protein L1 [Translation, ribosomal structure and biogenesis] J ribosomal protein L1 J TRUE TRUE 89 TRUE 4.099056 4.4194257 3.5889568 1.013258 1.8685628 Y 2.6122461 0.9925314 27.38 0.19216236 0.9915937 0.2588631 0.96558751 TRUE 0.5 0.96558751 TRUE 0.66688969 0.9925314 0.8938013 0.9860657 351607 4476 1953972 1953973 1 220 Same + + 251.025885 -12.64298345 0 1.264200e+03 54.0 1.410974 2.361712 0.8755345 81 Ribosomal protein L1 [Translation, ribosomal structure and biogenesis] J ribosomal protein L1 1.431834 2.600451 0.9685793 244 Ribosomal protein L10 [Translation, ribosomal structure and biogenesis] J ribosomal protein L10 J TRUE TRUE 90 TRUE 4.142606 4.2860844 0.6029076 1.013258 1.8685628 Y 2.6122461 0.9722111 28.98 0.15300127 0.9680687 0.2096364 0.84559533 TRUE 0.5 0.84559533 TRUE 0.51075119 0.9722111 0.8524899 0.9490568 351607 4476 1953973 1953974 1 58 Same + + 296.483369 39.11830132 0 1.613587e+03 40.0 1.431834 2.600451 0.9685793 244 Ribosomal protein L10 [Translation, ribosomal structure and biogenesis] J ribosomal protein L10 1.191852 2.039905 0.7752603 222 Ribosomal protein L7/L12 [Translation, ribosomal structure and biogenesis] J ribosomal protein L7/L12 J TRUE TRUE 91 TRUE 4.107241 4.4140509 3.4566521 1.013258 2.2689969 Y 2.6122461 0.9924199 19.39 0.51884147 0.9914673 0.6129041 0.99208215 TRUE 0.5 0.99208215 TRUE 0.90053436 0.9924199 0.8935735 0.9858591 351607 4476 1953974 1953975 1 377 Same + + 45.626276 -15.68633859 0 4.394280e+01 146.7 1.191852 2.039905 0.7752603 222 Ribosomal protein L7/L12 [Translation, ribosomal structure and biogenesis] J ribosomal protein L7/L12 1.254764 2.068470 0.6886365 85 DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription] K DNA-directed RNA polymerase, beta subunit - TRUE TRUE 92 TRUE 4.144829 2.7074124 0.6148782 1.013258 1.0237197 N 0.8991512 0.9304680 31.82 0.10408382 0.9165187 0.1457270 0.56052906 TRUE 0.5 0.56052906 TRUE 0.27880242 0.9304680 0.7689231 0.8769350 351607 4476 1953975 1953976 1 95 Same + + 50.795965 36.56228073 0 1.195167e+02 3.0 1.254764 2.068470 0.6886365 85 DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription] K DNA-directed RNA polymerase, beta subunit 1.282943 2.132316 0.7366279 86 DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] K DNA-directed RNA polymerase, beta' subunit K TRUE TRUE 93 TRUE 4.180829 3.1261563 3.3138412 1.013258 3.2269548 Y 2.6122461 0.9899431 22.72 0.38398461 0.9886509 0.4778807 0.98191697 TRUE 0.5 0.98191697 TRUE 0.83243735 0.9899431 0.8885159 0.9812789 351607 4476 1953976 1953977 1 491 Same + + 53.545302 -14.79808531 0 1.901286e+02 146.7 1.282943 2.132316 0.7366279 86 DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] K DNA-directed RNA polymerase, beta' subunit 1.490812 2.524827 0.9298990 48 Ribosomal protein S12 [Translation, ribosomal structure and biogenesis] J ribosomal protein S12 - TRUE TRUE 94 TRUE 4.192628 3.3187739 0.6131459 1.013258 1.0237197 N 0.8991512 0.9416394 32.56 0.09458035 0.9307626 0.1329856 0.58407237 TRUE 0.5 0.58407237 TRUE 0.28347934 0.9416394 0.7911185 0.8957436 351607 4476 1953977 1953978 1 0 Same + + 297.400519 38.59739158 0 1.611376e+03 8.0 1.490812 2.524827 0.9298990 48 Ribosomal protein S12 [Translation, ribosomal structure and biogenesis] J ribosomal protein S12 1.428686 2.474891 0.9156076 49 Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] J ribosomal protein S7 J TRUE TRUE 95 TRUE 4.104537 4.4086794 3.4254773 1.013258 3.0420286 Y 2.6122461 0.9928832 7.97 0.67109322 0.9919926 0.7497479 0.99605943 TRUE 0.5 0.99605943 TRUE 0.94536531 0.9928832 0.8945203 0.9867180 351607 4476 1953978 1953979 1 31 Same + + 269.303615 37.54090648 0 1.382044e+03 146.7 1.428686 2.474891 0.9156076 49 Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] J ribosomal protein S7 1.337669 2.192991 0.7812393 480 Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] J translation elongation factor G J TRUE TRUE 96 TRUE 4.125503 4.3391627 3.3674649 1.013258 1.0237197 Y 2.6122461 0.9909318 16.52 0.64701211 0.9897768 0.7291009 0.99439655 TRUE 0.5 0.99439655 TRUE 0.93715271 0.9909318 0.8905340 0.9831048 351607 4476 1953979 1953980 1 60 Same + + 152.070590 30.45538029 0 6.659508e+02 4.0 1.337669 2.192991 0.7812393 480 Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] J translation elongation factor G 1.309597 2.089738 0.7304274 50 GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] J translation elongation factor Tu J TRUE TRUE 97 TRUE 4.241260 3.9547017 2.9992509 1.013258 3.2001089 Y 2.6122461 0.9909922 19.62 0.51102959 0.9898455 0.6054580 0.99027961 TRUE 0.5 0.99027961 TRUE 0.89488107 0.9909922 0.8906573 0.9832164 351607 4476 1953980 1953981 1 109 Same + + 186.184108 -13.10257946 0 5.749911e+02 146.7 1.309597 2.089738 0.7304274 50 GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] J translation elongation factor Tu 1.344619 2.187057 0.8776036 51 Ribosomal protein S10 [Translation, ribosomal structure and biogenesis] J ribosomal protein S10 J TRUE TRUE 98 TRUE 4.207966 3.8741498 0.6054422 1.013258 1.0237197 Y 2.6122461 0.9671952 23.82 0.32359049 0.9621095 0.4126101 0.92393888 TRUE 0.5 0.92393888 TRUE 0.71880615 0.9671952 0.8423565 0.9401188 351607 4476 1953981 1953982 1 11 Same + + 253.340181 40.88842371 0 1.364847e+03 54.0 1.344619 2.187057 0.8776036 51 Ribosomal protein S10 [Translation, ribosomal structure and biogenesis] J ribosomal protein S10 1.518897 2.573554 0.9416337 87 Ribosomal protein L3 [Translation, ribosomal structure and biogenesis] J ribosomal protein L3 J TRUE TRUE 99 TRUE 4.140233 4.3232029 3.5511503 1.013258 1.8685628 Y 2.6122461 0.9923404 12.82 0.68951817 0.9913772 0.7653076 0.99609875 TRUE 0.5 0.99609875 TRUE 0.94901704 0.9923404 0.8934111 0.9857118 351607 4476 1953982 1953983 1 -3 Same + + 285.770211 39.08895559 0 1.520141e+03 40.0 1.518897 2.573554 0.9416337 87 Ribosomal protein L3 [Translation, ribosomal structure and biogenesis] J ribosomal protein L3 1.391406 2.370446 0.8677311 88 Ribosomal protein L4 [Translation, ribosomal structure and biogenesis] J ribosomal protein L4/L1e J TRUE TRUE 100 TRUE 4.117819 4.3711753 3.4527463 1.013258 2.2689969 Y 2.6122461 0.9923523 4.46 0.83976334 0.9913907 0.8849946 0.99834571 TRUE 0.5 0.99834571 TRUE 0.97774737 0.9923523 0.8934354 0.9857338 351607 4476 1953983 1953984 1 -19 Same + + 294.872452 37.08374222 0 1.551741e+03 146.7 1.391406 2.370446 0.8677311 88 Ribosomal protein L4 [Translation, ribosomal structure and biogenesis] J ribosomal protein L4/L1e 1.462522 2.381173 0.9199287 89 Ribosomal protein L23 [Translation, ribosomal structure and biogenesis] J Ribosomal protein L25/L23 J TRUE TRUE 101 TRUE 4.109921 4.3818736 3.3405899 1.013258 1.0237197 Y 2.6122461 0.9908704 0.16 0.87697217 0.9897070 0.9127910 0.99854313 TRUE 0.5 0.99854313 TRUE 0.98302657 0.9908704 0.8904087 0.9829913 351607 4476 1953984 1953985 1 34 Same + + 301.074073 38.35066289 0 1.521321e+03 146.7 1.462522 2.381173 0.9199287 89 Ribosomal protein L23 [Translation, ribosomal structure and biogenesis] J Ribosomal protein L25/L23 1.362973 2.292600 0.8416613 90 Ribosomal protein L2 [Translation, ribosomal structure and biogenesis] J ribosomal protein L2 J TRUE TRUE 102 TRUE 4.101808 4.3765228 3.4177091 1.013258 1.0237197 Y 2.6122461 0.9911297 16.79 0.63850953 0.9900020 0.7217252 0.99431497 TRUE 0.5 0.99431497 TRUE 0.93518822 0.9911297 0.8909381 0.9834707 351607 4476 1953985 1953986 1 13 Same + + 307.042758 39.20202476 0 1.588872e+03 54.0 1.362973 2.292600 0.8416613 90 Ribosomal protein L2 [Translation, ribosomal structure and biogenesis] J ribosomal protein L2 1.542984 2.510984 0.9842617 185 Ribosomal protein S19 [Translation, ribosomal structure and biogenesis] J ribosomal protein S19 J TRUE TRUE 103 TRUE 4.096280 4.4033114 3.4644713 1.013258 1.8685628 Y 2.6122461 0.9920693 13.45 0.68705227 0.9910696 0.7632369 0.99591236 TRUE 0.5 0.99591236 TRUE 0.94817367 0.9920693 0.8928573 0.9852096 351607 4476 1953986 1953987 1 -7 Same + + 0.000000 0.00000000 0 0.000000e+00 54.0 1.542984 2.510984 0.9842617 185 Ribosomal protein S19 [Translation, ribosomal structure and biogenesis] J ribosomal protein S19 1.406405 2.507712 0.9092836 91 Ribosomal protein L22 [Translation, ribosomal structure and biogenesis] J ribosomal p