Taxon Scaffold Gene1 Gene2 Consecutive Sep Code Strand1 Strand2 GNScore GNWithin GNAll GNMinus GOScore CAI CAI.Alm CBI COG COGanno COGfun Description nCAI nCAI.Alm nCBI nCOG nCOGanno nCOGfun nDescription COGsim forward forwardplus sumBias same bbfGNScore bbfGNMinus bbfGNWithin bbfGNAll bbfGOScore COGsimClass cfCOG pSame groupIndexD pSameD pOpLogistic pOpDistance pOp1 bOp1 pCAI pOp bOp pOp2 pSame pOpLogisticLike pOpLogisticM 391038 44554 3014666 3014667 1 65 Same - - 0.0000000 1.80597154 0 -3.547196e+00 499 1.513878 2.129682 0.8653079 756 dUTPase [Nucleotide transport and metabolism] F deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 1.939265 2.791682 0.9092710 2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion] C luciferase-like - TRUE FALSE -1 TRUE 0.3665430 0.2186389 1.05931516 0.7100317 0.8706304 N 0.6100158 0.6854787 27.255 0.563828545 0.49976485 0.528204197 5.635972e-01 TRUE 0.5 5.635972e-01 TRUE 0.4425799190 0.6854787 0.38050322 0.4812735 391038 44554 3014667 3014668 1 74 Same - - 0.0000000 1.80597154 0 -1.961932e+00 499 1.939265 2.791682 0.9092710 2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion] C luciferase-like 1.791272 2.583232 0.8819420 452 Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism] H phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase - TRUE FALSE -2 TRUE 0.3665430 0.2219184 1.05931516 0.7100317 0.8706304 N 0.6100158 0.6854017 28.925 0.541126060 0.49958613 0.505274458 5.407150e-01 TRUE 0.5 5.407150e-01 TRUE 0.4199092189 0.6854017 0.38035946 0.4811843 391038 44554 3014668 3014669 1 -99 Same - - 0.0000000 7.41103322 0 -2.994948e+01 499 1.791272 2.583232 0.8819420 452 Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism] H phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1.528414 2.204884 0.7947165 597 Lipoprotein signal peptidase [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU lipoprotein signal peptidase - TRUE FALSE -3 TRUE 0.3665430 0.2194612 1.63741682 0.7100317 0.8706304 N 0.6100158 0.7535220 0.985 0.585498414 0.64338443 0.550232108 7.181839e-01 TRUE 0.5 7.181839e-01 TRUE 0.5898970379 0.7535220 0.50453815 0.5654913 391038 44554 3014669 3014670 1 0 Same - - 108.8614423 25.35270247 0 4.814823e+02 499 1.528414 2.204884 0.7947165 597 Lipoprotein signal peptidase [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU lipoprotein signal peptidase 1.468602 2.076411 0.7175522 60 Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J isoleucyl-tRNA synthetase - TRUE FALSE -4 TRUE 4.1547457 3.3780002 2.85034308 0.7100317 0.8706304 N 0.6100158 0.9871741 10.720 0.860484012 0.98583519 0.842312746 9.976758e-01 TRUE 0.5 9.976758e-01 TRUE 0.9802762502 0.9871741 0.88960327 0.9703840 391038 44554 3014670 3014671 1 -88 Same - - 40.3724162 25.07018836 0 3.551000e+02 499 1.468602 2.076411 0.7175522 60 Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J isoleucyl-tRNA synthetase 1.770227 2.548271 0.8875458 196 FAD synthase [Coenzyme metabolism] H riboflavin biosynthesis protein RibF - TRUE FALSE -5 TRUE 3.6269510 3.2656991 2.80846256 0.7100317 0.8706304 N 0.6100158 0.9807850 1.105 0.594744617 0.97864082 0.559673365 9.853463e-01 TRUE 0.5 9.853463e-01 TRUE 0.9148615699 0.9807850 0.87983616 0.9560037 391038 44554 3014671 3014672 1 -124 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 1.770227 2.548271 0.8875458 196 FAD synthase [Coenzyme metabolism] H riboflavin biosynthesis protein RibF 2.812822 4.041748 1.0450661 - - - conserved hypothetical protein TRUE FALSE -6 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 0.780 0.569287427 0.13879908 0.533740233 1.756132e-01 FALSE 0.5 1.756132e-01 FALSE 0.1683239404 0.5586823 0.13279174 0.3501931 391038 44554 3014673 3014674 1 -3 Same + + 6.0331514 12.08263997 0 1.077858e+01 499 1.963108 2.896752 0.9671572 299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism] F phosphoribosylglycinamide formyltransferase 1.714944 2.475725 0.8492753 144 tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] J Fmu (Sun) - TRUE TRUE -6 TRUE 1.7920658 1.5027213 2.12374419 0.7100317 0.8706304 N 0.6100158 0.9120240 7.290 0.846003258 0.89483385 0.826326610 9.790550e-01 TRUE 0.5 9.790550e-01 TRUE 0.9490236173 0.9120240 0.77214792 0.8152657 391038 44554 3014674 3014675 1 111 Same + + 1.1493846 4.83211806 0 1.122519e+01 NA 1.714944 2.475725 0.8492753 144 tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] J Fmu (Sun) 1.605209 2.334554 0.7903445 668 Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] M MscS Mechanosensitive ion channel - TRUE TRUE -5 TRUE 0.3751483 1.5246775 1.37898217 0.7100317 0.4836215 N 0.6100158 0.6724696 34.145 0.428528389 0.46899701 0.393735752 3.984257e-01 FALSE 0.5 3.984257e-01 FALSE 0.2931476935 0.6724696 0.35611020 0.4663931 391038 44554 3014675 3014676 1 201 Same + + 1.0334730 3.05277471 0 1.096707e+01 NA 1.605209 2.334554 0.7903445 668 Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] M MscS Mechanosensitive ion channel 1.891099 2.680926 0.8943881 1398 Fatty-acid desaturase [Lipid metabolism] I fatty acid desaturase - TRUE TRUE -4 TRUE 0.3432007 1.5170132 1.21629398 0.7100317 0.4836215 N 0.6100158 0.6458465 42.180 0.202143843 0.40216632 0.179944005 1.456175e-01 FALSE 0.5 1.456175e-01 FALSE 0.1002665288 0.6458465 0.30548399 0.4370421 391038 44554 3014676 3014677 1 132 Same + + 0.0000000 5.52513137 0 -1.071920e+00 499 1.891099 2.680926 0.8943881 1398 Fatty-acid desaturase [Lipid metabolism] I fatty acid desaturase 2.102042 3.026111 0.9796549 379 Quinolinate synthase [Coenzyme metabolism] H quinolinate synthetase complex, A subunit - TRUE TRUE -3 TRUE 0.3665430 0.2282731 1.44163169 0.7100317 0.8706304 N 0.6100158 0.7314286 36.670 0.368412066 0.59968135 0.335633705 4.663267e-01 FALSE 0.5 4.663267e-01 FALSE 0.3363402438 0.7314286 0.46490500 0.5369019 391038 44554 3014677 3014678 1 0 Same + + 100.8222721 19.30370142 0 1.433783e+02 8 2.102042 3.026111 0.9796549 379 Quinolinate synthase [Coenzyme metabolism] H quinolinate synthetase complex, A subunit 1.716514 2.512897 0.8652684 157 Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism] H nicotinate-nucleotide pyrophosphorylase H TRUE TRUE -2 TRUE 4.1099002 2.8832129 2.43068137 0.7100317 3.1686272 Y 2.3518872 0.9965959 10.720 0.860484012 0.99627605 0.842312746 9.993943e-01 TRUE 0.5 9.993943e-01 TRUE 0.9830607609 0.9965959 0.90393412 0.9920401 391038 44554 3014679 3014680 1 245 Same - - 0.0000000 8.36540923 0 -2.036194e+01 499 2.011642 2.903217 0.9396865 29 Aspartate oxidase [Coenzyme metabolism] H L-aspartate oxidase 1.408621 1.879559 0.9286253 267 Ribosomal protein L33 [Translation, ribosomal structure and biogenesis] J ribosomal protein L33 - FALSE TRUE -2 TRUE 0.3665430 0.2185681 1.73845020 0.7100317 0.8706304 N 0.6100158 0.7643617 44.660 0.106273478 0.66390273 0.093370181 1.902096e-01 FALSE 0.5 1.902096e-01 FALSE 0.1156530055 0.7643617 0.52376432 0.5799910 391038 44554 3014680 3014681 1 11 Same - - 55.2008614 24.78916276 0 4.288170e+02 50 1.408621 1.879559 0.9286253 267 Ribosomal protein L33 [Translation, ribosomal structure and biogenesis] J ribosomal protein L33 2.073552 2.954477 1.0049502 227 Ribosomal protein L28 [Translation, ribosomal structure and biogenesis] J ribosomal protein L28 J FALSE TRUE -3 TRUE 3.7850213 3.3382345 2.75816017 0.7100317 2.2601151 Y 2.3518872 0.9951091 14.810 0.820367786 0.99464154 0.798196948 9.988218e-01 TRUE 0.5 9.988218e-01 TRUE 0.9766801492 0.9951091 0.90167830 0.9885863 391038 44554 3014681 3014682 1 259 Same - - 14.6801419 -12.37529738 0 1.517034e+02 499 2.073552 2.954477 1.0049502 227 Ribosomal protein L28 [Translation, ribosomal structure and biogenesis] J ribosomal protein L28 1.878115 2.744099 0.9323894 2003 DNA repair proteins [DNA replication, recombination, and repair] L DNA repair protein RadC - FALSE TRUE -4 TRUE 2.7016017 2.9096836 0.10084365 0.7100317 0.8706304 N 0.6100158 0.8438874 45.350 0.085137198 0.79831597 0.074586014 2.691955e-01 FALSE 0.5 2.691955e-01 FALSE 0.1533363921 0.8438874 0.66057121 0.6970807 391038 44554 3014683 3014684 1 3 Same + + 8.4620664 23.41735483 0 1.665209e+02 499 2.232304 3.181648 0.9948893 1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones] O peptidylprolyl isomerase, FKBP-type 1.764497 2.533419 0.8683438 761 Penicillin tolerance protein [Lipid metabolism / Cell envelope biogenesis, outer membrane] IM hydroxymethylbutenyl pyrophosphate reductase - TRUE TRUE -4 TRUE 2.1684671 2.9540956 2.66013188 0.7100317 0.8706304 N 0.6100158 0.9415163 12.135 0.853282157 0.93227872 0.834353455 9.876639e-01 TRUE 0.5 9.876639e-01 TRUE 0.9633723856 0.9415163 0.81892165 0.8726657 391038 44554 3014684 3014685 1 539 Same + + 0.0000000 -9.13699014 0 7.482037e-01 NA 1.764497 2.533419 0.8683438 761 Penicillin tolerance protein [Lipid metabolism / Cell envelope biogenesis, outer membrane] IM hydroxymethylbutenyl pyrophosphate reductase 2.132696 3.035558 0.9496006 683 ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] E Extracellular ligand-binding receptor - TRUE TRUE -3 TRUE 0.3665430 0.5997898 0.10681600 0.7100317 0.4836215 N 0.6100158 0.5171681 50.675 0.008187683 0.01831895 0.007098971 1.540263e-04 FALSE 0.5 1.540263e-04 FALSE 0.0004032112 0.5171681 0.04658624 0.3131772 391038 44554 3014685 3014686 1 228 Same + + 31.8089628 3.22228402 0 7.036139e+01 NA 2.132696 3.035558 0.9496006 683 ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] E Extracellular ligand-binding receptor 1.516081 2.179302 0.7738692 559 Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism] E inner-membrane translocator E TRUE TRUE -2 TRUE 3.4625292 2.5376932 1.22778032 0.7100317 0.4836215 Y 2.3518872 0.9770912 43.830 0.135280767 0.97443859 0.119325755 8.564024e-01 TRUE 0.5 8.564024e-01 TRUE 0.5208136012 0.9770912 0.87417132 0.9477996 391038 44554 3014686 3014687 1 28 Same + + 113.8664252 23.77897374 0 4.686667e+02 453 1.516081 2.179302 0.7738692 559 Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism] E inner-membrane translocator 1.380711 1.974070 0.6871454 4177 ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism] E inner-membrane translocator E TRUE TRUE -1 TRUE 4.1772726 3.3684344 2.69106486 0.7100317 1.0709156 Y 2.3518872 0.9946621 19.890 0.715807722 0.99414926 0.685676325 9.976689e-01 TRUE 0.5 9.976689e-01 TRUE 0.9581993385 0.9946621 0.90099980 0.9875508 391038 44554 3014687 3014688 1 23 Same + + 110.0962617 24.18481626 0 3.995416e+02 499 1.380711 1.974070 0.6871454 4177 ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism] E inner-membrane translocator 1.535373 2.162925 0.7921040 411 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E ABC transporter related E TRUE TRUE 0 TRUE 4.1603709 3.3176519 2.71814444 0.7100317 0.8706304 Y 2.3518872 0.9943963 18.590 0.744260759 0.99385621 0.715948973 9.978804e-01 TRUE 0.5 9.978804e-01 TRUE 0.9634591229 0.9943963 0.90059609 0.9869354 391038 44554 3014688 3014689 1 0 Same + + 144.9416880 24.18481626 0 4.750869e+02 499 1.535373 2.162925 0.7921040 411 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E ABC transporter related 1.580506 2.233373 0.8297934 410 ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism] E ABC transporter related E TRUE TRUE 1 TRUE 4.2509662 3.3732156 2.71814444 0.7100317 0.8706304 Y 2.3518872 0.9947331 10.720 0.860484012 0.99422751 0.842312746 9.990595e-01 TRUE 0.5 9.990595e-01 TRUE 0.9825173376 0.9947331 0.90110762 0.9877152 391038 44554 3014690 3014691 1 -3 Same - - 2.6390573 5.81750246 0 4.387515e+00 499 3.286137 4.778006 1.0501765 456 Acetyltransferases [General function prediction only] R GCN5-related N-acetyltransferase 1.608911 2.237227 0.7812204 4992 Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] E acetylornithine and succinylornithine aminotransferases TRUE FALSE 1 TRUE 1.0182020 0.9318405 1.47528872 0.7100317 0.8706304 U 0.5172769 0.8004123 7.290 0.846003258 0.72814452 0.826326610 9.363637e-01 TRUE 0.5 9.363637e-01 TRUE 0.8863413652 0.8004123 0.58669296 0.6306175 391038 44554 3014691 3014692 1 331 Same - - 0.0000000 7.02226246 0 7.222722e+00 499 1.608911 2.237227 0.7812204 4992 Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] E acetylornithine and succinylornithine aminotransferases 1.488430 2.107957 0.7400388 543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] HC oxidoreductase FAD/NAD(P)-binding - TRUE FALSE 0 TRUE 0.3665430 1.1806306 1.59119629 0.7100317 0.8706304 N 0.6100158 0.7282434 47.605 0.036091259 0.59316183 0.031409728 5.176470e-02 FALSE 0.5 5.176470e-02 FALSE 0.0308062339 0.7282434 0.45914092 0.5328829 391038 44554 3014694 3014695 1 166 Same - - 0.0000000 8.20905189 0 8.209052e+00 NA 2.610299 3.719464 1.1062027 - - - conserved hypothetical protein 1.776602 2.570709 0.8926394 1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] J Pseudouridine synthase, Rsu TRUE FALSE -1 TRUE 0.3665430 1.2626135 1.71353416 0.7100317 0.4836215 U 0.5172769 0.7087466 39.650 0.301788532 0.55197923 0.272381425 3.474823e-01 FALSE 0.5 3.474823e-01 FALSE 0.2410578763 0.7087466 0.42358029 0.5088235 391038 44554 3014695 3014696 1 235 Same - - 0.0000000 -4.87333338 0 -5.446194e+00 499 1.776602 2.570709 0.8926394 1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis] J Pseudouridine synthase, Rsu 1.932116 2.842225 0.9665947 - - - conserved hypothetical protein TRUE FALSE -2 TRUE 0.3665430 0.2173453 0.12212132 0.7100317 0.8706304 U 0.5172769 0.5454767 44.185 0.122417086 0.09155614 0.107790099 1.386373e-02 FALSE 0.5 1.386373e-02 FALSE 0.0162124695 0.5454767 0.10565696 0.3381396 391038 44554 3014698 3014699 1 105 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA NA NA NA 1.884812 2.669335 0.9097901 635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] H oxygen-independent coproporphyrinogen III oxidase TRUE FALSE -3 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 33.450 0.443858402 0.13879908 0.408711274 1.139698e-01 FALSE 0.5 1.139698e-01 FALSE 0.1089011785 0.5586823 0.13279174 0.3501931 391038 44554 3014700 3014701 1 90 Same + + 0.0000000 -0.09897991 0 -9.897991e-02 NA 2.287072 3.198869 0.9950636 - - - protein of unknown function UPF0153 2.122850 3.075175 0.9844917 - - - conserved hypothetical protein FALSE FALSE -3 TRUE 0.3665430 0.2406602 0.20837529 0.7100317 0.4836215 U 0.5172769 0.5297813 31.395 0.490919648 0.03234315 0.455095435 3.122538e-02 FALSE 0.5 3.122538e-02 FALSE 0.0706373718 0.5297813 0.07305956 0.3241554 391038 44554 3014701 3014702 1 74 Same + + 0.0000000 10.08791485 0 1.008791e+01 NA 2.122850 3.075175 0.9844917 - - - conserved hypothetical protein 1.961461 2.821265 0.9366704 1968 Uncharacterized bacitracin resistance protein [Defense mechanisms] V putative undecaprenol kinase FALSE FALSE -2 TRUE 0.3665430 1.4567418 1.96318650 0.7100317 0.4836215 U 0.5172769 0.7338695 28.925 0.541126060 0.60463886 0.505274458 6.432982e-01 TRUE 0.5 6.432982e-01 TRUE 0.5104923566 0.7338695 0.46931333 0.5399987 391038 44554 3014703 3014704 1 255 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 1.745689 2.477337 0.8896751 220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] R tRNA (guanine-N(7)-)-methyltransferase NA NA NA TRUE FALSE -2 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 45.150 0.090973823 0.13879908 0.079762361 1.587351e-02 FALSE 0.5 1.587351e-02 FALSE 0.0150932517 0.5586823 0.13279174 0.3501931 391038 44554 3014704 3014705 1 79 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA NA NA NA 1.613927 2.379123 0.8713693 - - - protein of unknown function YGGT TRUE FALSE -3 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 29.740 0.525718451 0.13879908 0.489798055 1.515705e-01 FALSE 0.5 1.515705e-01 FALSE 0.1451035822 0.5586823 0.13279174 0.3501931 391038 44554 3014705 3014706 1 137 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 1.613927 2.379123 0.8713693 - - - protein of unknown function YGGT 2.151587 3.005003 0.9290139 - - - Ethyl tert-butyl ether degradation EthD TRUE FALSE -4 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 37.155 0.360624910 0.13879908 0.328179383 8.332890e-02 FALSE 0.5 8.332890e-02 FALSE 0.0795007282 0.5586823 0.13279174 0.3501931 391038 44554 3014706 3014707 1 75 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.151587 3.005003 0.9290139 - - - Ethyl tert-butyl ether degradation EthD 2.157304 3.231077 1.0720999 - - - hypothetical protein TRUE FALSE -5 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 29.095 0.538272981 0.13879908 0.502403447 1.581699e-01 FALSE 0.5 1.581699e-01 FALSE 0.1514716319 0.5586823 0.13279174 0.3501931 391038 44554 3014707 3014708 1 371 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.157304 3.231077 1.0720999 - - - hypothetical protein 2.683706 3.883427 1.1182926 - - - conserved hypothetical protein TRUE FALSE -6 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 48.480 0.024551339 0.13879908 0.021333564 4.040124e-03 FALSE 0.5 4.040124e-03 FALSE 0.0038392627 0.5586823 0.13279174 0.3501931 391038 44554 3014708 3014709 1 409 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.683706 3.883427 1.1182926 - - - conserved hypothetical protein 4.230257 5.894113 1.0864406 - - - hypothetical protein TRUE FALSE -7 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 49.210 0.017400141 0.13879908 0.015105111 2.845905e-03 FALSE 0.5 2.845905e-03 FALSE 0.0027042553 0.5586823 0.13279174 0.3501931 391038 44554 3014711 3014712 1 76 Same - - 0.0000000 8.49790381 0 4.404207e+00 NA 1.980500 2.866865 0.9818239 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E Lysine exporter protein (LYSE/YGGA) 1.649399 2.332586 0.8197428 43 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism] H UbiD family decarboxylases - TRUE FALSE -8 TRUE 0.3665430 0.9359498 1.75895510 0.7100317 0.4836215 N 0.6100158 0.7309603 29.270 0.535109885 0.59872626 0.499223234 6.320059e-01 TRUE 0.5 6.320059e-01 TRUE 0.4991638938 0.7309603 0.46405823 0.5363093 391038 44554 3014714 3014715 1 124 Same - - 0.0000000 16.34459415 0 -1.444760e+01 499 1.684821 2.460274 0.8675039 436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] E aminotransferase, class I and II 1.501392 2.174185 0.8609154 781 Transcription termination factor [Transcription] K NusB antitermination factor - TRUE FALSE -9 TRUE 0.3665430 0.2177974 2.33953078 0.7100317 0.8706304 N 0.6100158 0.8218295 35.860 0.387489036 0.76364101 0.353964596 6.714756e-01 TRUE 0.5 6.714756e-01 TRUE 0.5114836885 0.8218295 0.62335712 0.6625739 391038 44554 3014715 3014716 1 -3 Same - - 99.7034280 22.40928056 0 4.929625e+02 499 1.501392 2.174185 0.8609154 781 Transcription termination factor [Transcription] K NusB antitermination factor 1.463217 2.107131 0.7850910 54 Riboflavin synthase beta-chain [Coenzyme metabolism] H 6,7-dimethyl-8-ribityllumazine synthase - TRUE FALSE -10 TRUE 4.1071066 3.3875799 2.61127027 0.7100317 0.8706304 N 0.6100158 0.9847286 7.290 0.846003258 0.98309252 0.826326610 9.968792e-01 TRUE 0.5 9.968792e-01 TRUE 0.9770858321 0.9847286 0.88586952 0.9648511 391038 44554 3014716 3014717 1 90 Same - - 131.9869833 25.10354368 0 6.372186e+02 7 1.463217 2.107131 0.7850910 54 Riboflavin synthase beta-chain [Coenzyme metabolism] H 6,7-dimethyl-8-ribityllumazine synthase 1.502075 2.143547 0.7609751 108 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism] H 3,4-dihydroxy-2-butanone 4-phosphate synthase H TRUE FALSE -11 TRUE 4.2168623 3.4372954 2.81316570 0.7100317 3.2556870 Y 2.3518872 0.9973976 31.395 0.490919648 0.99715537 0.455095435 9.970505e-01 TRUE 0.5 9.970505e-01 TRUE 0.9019847086 0.9973976 0.90514961 0.9939082 391038 44554 3014717 3014718 1 115 Same - - 123.5803065 -38.36748001 0 5.763131e+02 499 1.502075 2.143547 0.7609751 108 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism] H 3,4-dihydroxy-2-butanone 4-phosphate synthase 1.652309 2.383666 0.8067093 307 Riboflavin synthase alpha chain [Coenzyme metabolism] H riboflavin synthase, alpha subunit H TRUE FALSE -12 TRUE 4.2055292 3.4228239 0.07277331 0.7100317 0.8706304 Y 2.3518872 0.9747248 34.680 0.416569957 0.97172965 0.382099060 9.608491e-01 TRUE 0.5 9.608491e-01 TRUE 0.8276164230 0.9747248 0.87053505 0.9425852 391038 44554 3014718 3014719 1 25 Same - - 146.5808668 14.11501333 0 5.773599e+02 499 1.652309 2.383666 0.8067093 307 Riboflavin synthase alpha chain [Coenzyme metabolism] H riboflavin synthase, alpha subunit 1.598773 2.316806 0.8298194 117 Pyrimidine deaminase [Coenzyme metabolism] H riboflavin biosynthesis protein RibD H TRUE FALSE -13 TRUE 4.2566655 3.4244303 2.24227941 0.7100317 0.8706304 Y 2.3518872 0.9930437 19.125 0.731874201 0.99236286 0.702738841 9.971885e-01 TRUE 0.5 9.971885e-01 TRUE 0.9602762240 0.9930437 0.89854110 0.9838112 391038 44554 3014719 3014720 1 40 Same - - 3.5835189 -1.88110739 0 -3.935832e+01 499 1.598773 2.316806 0.8298194 117 Pyrimidine deaminase [Coenzyme metabolism] H riboflavin biosynthesis protein RibD 1.630407 2.333093 0.8089205 1 Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism] H glutamate-1-semialdehyde-2,1-aminomutase H TRUE FALSE -14 TRUE 1.2443140 0.2200006 0.15464008 0.7100317 0.8706304 Y 2.3518872 0.8598104 22.590 0.657609446 0.82224118 0.624544126 8.988276e-01 TRUE 0.5 8.988276e-01 TRUE 0.8083371227 0.8598104 0.68709696 0.7230637 391038 44554 3014720 3014721 1 211 Same - - 0.0000000 0.16466460 0 1.646646e-01 NA 1.630407 2.333093 0.8089205 1 Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism] H glutamate-1-semialdehyde-2,1-aminomutase 1.971044 2.833758 0.9425087 - - - conserved hypothetical protein TRUE FALSE -15 TRUE 0.3665430 0.4771405 0.71730514 0.7100317 0.4836215 U 0.5172769 0.5966471 42.860 0.173536094 0.26296915 0.153872105 6.969631e-02 FALSE 0.5 6.969631e-02 FALSE 0.0526698063 0.5966471 0.20935218 0.3863947 391038 44554 3014723 3014724 1 -22 Same - - 0.0000000 9.29068083 0 9.290681e+00 499 1.884367 2.700034 0.8934703 837 Glucokinase [Carbohydrate transport and metabolism] G glucokinase 2.106714 3.128046 0.9840206 363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism] G 6-phosphogluconolactonase G TRUE FALSE -16 TRUE 0.3665430 1.4018856 1.88594593 0.7100317 0.8706304 Y 2.3518872 0.8845386 2.650 0.696822520 0.85768905 0.665618527 9.326696e-01 TRUE 0.5 9.326696e-01 TRUE 0.8600134653 0.8845386 0.72774061 0.7653293 391038 44554 3014726 3014727 1 506 Same - - 0.0000000 -1.73939148 0 1.931325e-01 NA 1.658280 2.384508 0.8408033 364 Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] G glucose-6-phosphate 1-dehydrogenase 3.327438 4.920956 0.9495902 - - - conserved hypothetical protein TRUE FALSE -17 TRUE 0.3665430 0.4909935 0.15962767 0.7100317 0.4836215 U 0.5172769 0.5158585 50.320 0.009902356 0.01831895 0.008587620 1.865992e-04 FALSE 0.5 1.865992e-04 FALSE 0.0004581715 0.5158585 0.04382327 0.3120503 391038 44554 3014730 3014731 1 -10 Same + + 21.9223276 11.79725167 0 1.264807e+02 453 1.727385 2.467473 0.8857763 1175 ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism] G binding-protein-dependent transport systems inner membrane component 1.487126 2.089178 0.7419235 395 ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism] G binding-protein-dependent transport systems inner membrane component G FALSE FALSE -17 TRUE 3.1440849 2.8248660 2.09503965 0.7100317 1.0709156 Y 2.3518872 0.9845994 3.570 0.742929284 0.98294719 0.714526634 9.940328e-01 TRUE 0.5 9.940328e-01 TRUE 0.9572430337 0.9845994 0.88567204 0.9645597 391038 44554 3014731 3014732 1 119 Same + + 7.3731135 12.08379673 0 8.804902e+01 499 1.487126 2.089178 0.7419235 395 ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism] G binding-protein-dependent transport systems inner membrane component 1.989134 2.776840 0.8548214 3839 ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] G ABC transporter related G FALSE FALSE -16 TRUE 1.9698951 2.6468188 2.12473885 0.7100317 0.8706304 Y 2.3518872 0.9626989 35.195 0.404492794 0.95775758 0.370386825 9.390257e-01 TRUE 0.5 9.390257e-01 TRUE 0.7963061186 0.9626989 0.85197109 0.9165763 391038 44554 3014733 3014734 1 16 Same - - 0.0000000 5.52808114 0 4.642980e+00 NA 3.174336 4.605993 1.0525255 2860 Predicted membrane protein [Function unknown] S protein of unknown function UPF0126 3.243743 4.746279 1.1335011 2840 Uncharacterized protein conserved in bacteria [Function unknown] S Smr protein/MutS2 TRUE FALSE -16 TRUE 0.3665430 0.9587443 1.44235661 0.7100317 0.4836215 U 0.5172769 0.6821377 16.630 0.786883552 0.49197507 0.761780045 7.814505e-01 TRUE 0.5 7.814505e-01 TRUE 0.6883157668 0.6821377 0.37425994 0.4774171 391038 44554 3014734 3014735 1 142 Same - - 2.4674181 7.82800135 0 9.986888e+00 NA 3.243743 4.746279 1.1335011 2840 Uncharacterized protein conserved in bacteria [Function unknown] S Smr protein/MutS2 1.491168 2.103299 0.7520075 492 Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] O thioredoxin reductase TRUE FALSE -17 TRUE 0.9587062 1.4511853 1.67078450 0.7100317 0.4836215 U 0.5172769 0.7842748 37.640 0.353681058 0.70011778 0.321546084 5.609359e-01 TRUE 0.5 5.609359e-01 TRUE 0.4092780006 0.7842748 0.55871453 0.6074837 391038 44554 3014736 3014737 1 37 Same + + 15.3821907 22.02428426 0 8.473108e+01 499 1.704776 2.466907 0.8622473 1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning] D cell divisionFtsK/SpoIIIE 1.668595 2.319435 0.7985560 2834 Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane] M outer membrane lipoprotein carrier protein LolA - FALSE FALSE -17 TRUE 2.7526525 2.6342528 2.58534037 0.7100317 0.8706304 N 0.6100158 0.9612382 22.040 0.669535281 0.95603659 0.636985899 9.778067e-01 TRUE 0.5 9.778067e-01 TRUE 0.9197078327 0.9612382 0.84970638 0.9134716 391038 44554 3014739 3014740 1 274 Same + + 0.0000000 0.00000000 0 0.000000e+00 499 1.874178 2.642775 0.8664022 10 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family [Amino acid transport and metabolism] E putative agmatinase 2.044053 2.945643 0.9683828 5010 Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] U TPR repeat - FALSE FALSE -16 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 N 0.6100158 0.5974727 45.875 0.070960603 0.26549406 0.062047189 2.686674e-02 FALSE 0.5 2.686674e-02 FALSE 0.0200166191 0.5974727 0.21099364 0.3872086 391038 44554 3014742 3014743 1 94 Same + + 13.9443084 -40.83459748 0 1.908019e+02 499 1.583989 2.271121 0.7923981 2256 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] L AAA ATPase, central region 1.611600 2.290312 0.8179265 172 Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J seryl-tRNA synthetase - FALSE FALSE -15 TRUE 2.6510771 3.0078731 0.07046877 0.7100317 0.8706304 N 0.6100158 0.8349081 31.990 0.477658878 0.78442168 0.441962247 7.689156e-01 TRUE 0.5 7.689156e-01 TRUE 0.6247694532 0.8349081 0.64548839 0.6828311 391038 44554 3014743 3014744 1 152 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.611600 2.290312 0.8179265 172 Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] J seryl-tRNA synthetase NA NA NA FALSE FALSE -14 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 38.495 0.338629080 0.13879908 0.307211653 7.622987e-02 FALSE 0.5 7.622987e-02 FALSE 0.0727019639 0.5586823 0.13279174 0.3501931 391038 44554 3014744 3014745 1 950 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA NA NA NA 2.147925 3.149620 1.0143926 642 Signal transduction histidine kinase [Signal transduction mechanisms] T PAS/PAC sensor signal transduction histidine kinase FALSE FALSE -13 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 52.090 0.003671149 0.13879908 0.003181072 5.935039e-04 FALSE 0.5 5.935039e-04 FALSE 0.0005638998 0.5586823 0.13279174 0.3501931 391038 44554 3014745 3014746 1 -3 Same + + 0.0000000 0.00000000 0 0.000000e+00 165 2.147925 3.149620 1.0143926 642 Signal transduction histidine kinase [Signal transduction mechanisms] T PAS/PAC sensor signal transduction histidine kinase 2.057933 3.041094 1.0022771 4566 Response regulator [Signal transduction mechanisms] T two component transcriptional regulator, LuxR family T FALSE FALSE -12 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 1.5911445 Y 2.3518872 0.8181281 7.290 0.846003258 0.75763914 0.826326610 9.449750e-01 TRUE 0.5 9.449750e-01 TRUE 0.8985004308 0.8181281 0.61705833 0.6569450 391038 44554 3014746 3014747 1 63 Same + + 0.0000000 0.54773018 0 5.477302e-01 93 2.057933 3.041094 1.0022771 4566 Response regulator [Signal transduction mechanisms] T two component transcriptional regulator, LuxR family 2.222497 3.241845 1.0067638 784 FOG: CheY-like receiver [Signal transduction mechanisms] T response regulator receiver protein T FALSE FALSE -11 TRUE 0.3665430 0.5754736 0.87126952 0.7100317 1.8485076 Y 2.3518872 0.8596936 26.890 0.569119492 0.82206891 0.533569793 8.592032e-01 TRUE 0.5 8.592032e-01 TRUE 0.7434430594 0.8596936 0.68690341 0.7228696 391038 44554 3014747 3014748 1 231 Same + + 0.0000000 0.00000000 0 0.000000e+00 499 2.222497 3.241845 1.0067638 784 FOG: CheY-like receiver [Signal transduction mechanisms] T response regulator receiver protein 1.563396 2.279035 0.7708811 845 Membrane-fusion protein [Cell envelope biogenesis, outer membrane] M efflux transporter, RND family, MFP subunit - FALSE FALSE -10 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 N 0.6100158 0.5974727 43.975 0.129947026 0.26549406 0.114537751 5.122068e-02 FALSE 0.5 5.122068e-02 FALSE 0.0384061840 0.5974727 0.21099364 0.3872086 391038 44554 3014748 3014749 1 50 Same + + 8.0472037 1.24986470 0 1.238811e+01 499 1.563396 2.279035 0.7708811 845 Membrane-fusion protein [Cell envelope biogenesis, outer membrane] M efflux transporter, RND family, MFP subunit 1.409669 2.012718 0.6158093 841 Cation/multidrug efflux pump [Defense mechanisms] V transporter, hydrophobe/amphiphile efflux-1 (HAE1) family - FALSE FALSE -9 TRUE 2.0985716 1.5920126 0.97606125 0.7100317 0.8706304 N 0.6100158 0.8685532 24.600 0.614931962 0.83500468 0.580375116 8.898894e-01 TRUE 0.5 8.898894e-01 TRUE 0.7896382846 0.8685532 0.70154270 0.7377332 391038 44554 3014749 3014750 1 2 Same + + 0.0000000 0.00000000 0 0.000000e+00 453 1.409669 2.012718 0.6158093 841 Cation/multidrug efflux pump [Defense mechanisms] V transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1.461400 2.112576 0.7063381 1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU RND efflux system, outer membrane lipoprotein, NodT family - FALSE FALSE -8 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 1.0709156 N 0.6100158 0.6112211 11.650 0.856276179 0.30653852 0.837660259 7.247899e-01 TRUE 0.5 7.247899e-01 TRUE 0.6506828378 0.6112211 0.23818476 0.4009380 391038 44554 3014750 3014751 1 73 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.461400 2.112576 0.7063381 1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU RND efflux system, outer membrane lipoprotein, NodT family 1.892604 2.709961 0.8964807 3008 Paraquat-inducible protein B [General function prediction only] R Mammalian cell entry related FALSE FALSE -7 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 28.745 0.543944268 0.13879908 0.508112701 1.612349e-01 FALSE 0.5 1.612349e-01 FALSE 0.1544306094 0.5586823 0.13279174 0.3501931 391038 44554 3014751 3014752 1 -3 Same + + 15.7961135 0.00000000 0 2.972920e+01 NA 1.892604 2.709961 0.8964807 3008 Paraquat-inducible protein B [General function prediction only] R Mammalian cell entry related 2.137496 3.198758 1.0594119 3009 Uncharacterized protein conserved in bacteria [Function unknown] S protein of unknown function DUF330 FALSE FALSE -6 TRUE 2.7817408 2.0700828 0.42558877 0.7100317 0.4836215 U 0.5172769 0.8665063 7.290 0.846003258 0.83203953 0.826326610 9.645570e-01 TRUE 0.5 9.645570e-01 TRUE 0.9270464945 0.8665063 0.69816809 0.7342724 391038 44554 3014753 3014754 1 69 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 1.798274 2.534604 0.8660439 2326 Uncharacterized conserved protein [Function unknown] S protein of unknown function DUF344 2.304099 3.269642 0.9866261 - - - hypothetical protein TRUE FALSE -6 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 27.975 0.554465406 0.13879908 0.518729083 1.670652e-01 FALSE 0.5 1.670652e-01 FALSE 0.1600618948 0.5586823 0.13279174 0.3501931 391038 44554 3014754 3014755 1 89 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.304099 3.269642 0.9866261 - - - hypothetical protein 3.973511 5.750530 1.1157854 - - - hypothetical protein TRUE FALSE -7 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 31.255 0.493972930 0.13879908 0.458126416 1.359422e-01 FALSE 0.5 1.359422e-01 FALSE 0.1300398358 0.5586823 0.13279174 0.3501931 391038 44554 3014755 3014756 1 277 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 3.973511 5.750530 1.1157854 - - - hypothetical protein 2.349131 3.381405 0.9933292 - - - conserved hypothetical protein TRUE FALSE -8 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 46.035 0.066973192 0.13879908 0.058529086 1.143651e-02 FALSE 0.5 1.143651e-02 FALSE 0.0108719400 0.5586823 0.13279174 0.3501931 391038 44554 3014757 3014758 1 210 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.973971 2.775019 1.0072039 - - - ABC phosphate transporter, periplasmic ligand binding protein 1.778375 2.519502 0.8695702 - - - putative polyhydroxybutyrate depolymerase FALSE FALSE -8 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 42.770 0.177289894 0.13879908 0.157281497 3.356539e-02 FALSE 0.5 3.356539e-02 FALSE 0.0319437137 0.5586823 0.13279174 0.3501931 391038 44554 3014758 3014759 1 27 Same + + 0.0000000 0.89174962 0 8.917496e-01 NA 1.778375 2.519502 0.8695702 - - - putative polyhydroxybutyrate depolymerase 1.925226 2.813231 0.9625433 - - - hypothetical protein FALSE FALSE -7 TRUE 0.3665430 0.6121455 0.92623999 0.7100317 0.4836215 U 0.5172769 0.6222599 19.620 0.721290425 0.33818092 0.691489792 5.694139e-01 TRUE 0.5 5.694139e-01 TRUE 0.4760131621 0.6222599 0.25982225 0.4122056 391038 44554 3014759 3014760 1 17 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.925226 2.813231 0.9625433 - - - hypothetical protein 2.235024 3.258331 1.0499664 - - - hypothetical protein FALSE FALSE -6 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 16.935 0.781252706 0.13879908 0.755691858 3.653266e-01 FALSE 0.5 3.653266e-01 FALSE 0.3535397855 0.5586823 0.13279174 0.3501931 391038 44554 3014761 3014762 1 -3 Same - - 20.3808277 4.68982463 0 1.310342e+02 32 1.632354 2.335150 0.8109373 1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism] G inner-membrane translocator 1.712568 2.524052 0.8584313 1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism] G inner-membrane translocator G TRUE FALSE -6 TRUE 3.0653754 2.8437564 1.36505202 0.7100317 2.4513191 Y 2.3518872 0.9831303 7.290 0.846003258 0.98129259 0.826326610 9.965418e-01 TRUE 0.5 9.965418e-01 TRUE 0.9765435508 0.9831303 0.88342609 0.9612542 391038 44554 3014762 3014763 1 -3 Same - - 20.8451333 5.77502625 0 1.268913e+02 32 1.712568 2.524052 0.8584313 1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism] G inner-membrane translocator 1.650108 2.369361 0.7806343 1129 ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] G ABC transporter related G TRUE FALSE -7 TRUE 3.0938683 2.8321233 1.46938937 0.7100317 2.4513191 Y 2.3518872 0.9844664 7.290 0.846003258 0.98279761 0.826326610 9.968240e-01 TRUE 0.5 9.968240e-01 TRUE 0.9769970642 0.9844664 0.88546881 0.9642599 391038 44554 3014763 3014764 1 61 Same - - 16.8561492 1.99913091 0 1.172661e+02 NA 1.650108 2.369361 0.7806343 1129 ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] G ABC transporter related 1.523814 2.154840 0.7680527 1879 ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism] G periplasmic binding protein/LacI transcriptional regulator G TRUE FALSE -8 TRUE 2.8472397 2.7930569 1.08593115 0.7100317 0.4836215 Y 2.3518872 0.9599866 26.550 0.574706192 0.95455793 0.539244258 9.659699e-01 TRUE 0.5 9.659699e-01 TRUE 0.8827001288 0.9599866 0.84776437 0.9108208 391038 44554 3014764 3014765 1 502 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 1.523814 2.154840 0.7680527 1879 ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism] G periplasmic binding protein/LacI transcriptional regulator 1.987194 2.707683 0.9356089 3809 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein TRUE FALSE -9 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 50.290 0.010060611 0.13879908 0.008725048 1.635261e-03 FALSE 0.5 1.635261e-03 FALSE 0.0015537748 0.5586823 0.13279174 0.3501931 391038 44554 3014765 3014766 1 72 Same - - 3.2188758 3.65895682 0 6.011265e+00 NA 1.987194 2.707683 0.9356089 3809 Uncharacterized protein conserved in bacteria [Function unknown] S conserved hypothetical protein 2.022497 2.985000 0.9806020 861 Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism] P Integral membrane protein TerC TRUE FALSE -10 TRUE 1.1438520 1.0718880 1.27385859 0.7100317 0.4836215 U 0.5172769 0.7754617 28.540 0.546943851 0.68431921 0.511136148 7.235267e-01 TRUE 0.5 7.235267e-01 TRUE 0.5895207601 0.7754617 0.54330486 0.5951762 391038 44554 3014767 3014768 1 125 Same + + 1.6863990 -1.21730815 0 1.846345e-02 NA 2.136883 3.113714 0.9631854 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family 2.143579 3.139084 1.0283536 - - - conserved hypothetical protein FALSE FALSE -10 TRUE 0.5888593 0.4686089 0.17756583 0.7100317 0.4836215 U 0.5172769 0.5607540 36.030 0.382809032 0.14600863 0.349458483 9.587715e-02 FALSE 0.5 9.587715e-02 FALSE 0.0896540011 0.5607540 0.13702472 0.3521085 391038 44554 3014770 3014771 1 -57 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 3.182357 4.516631 1.1385254 - - - hypothetical protein 2.273892 3.293069 1.0253581 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E Lysine exporter protein (LYSE/YGGA) FALSE FALSE -9 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 1.610 0.631608585 0.13879908 0.597568915 2.165007e-01 FALSE 0.5 2.165007e-01 FALSE 0.2079423556 0.5586823 0.13279174 0.3501931 391038 44554 3014771 3014772 1 315 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.273892 3.293069 1.0253581 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E Lysine exporter protein (LYSE/YGGA) 4.257287 6.049885 1.1510678 - - - hypothetical protein FALSE FALSE -8 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 47.120 0.044121650 0.13879908 0.038440008 7.384351e-03 FALSE 0.5 7.384351e-03 FALSE 0.0070183977 0.5586823 0.13279174 0.3501931 391038 44554 3014772 3014773 1 98 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 4.257287 6.049885 1.1510678 - - - hypothetical protein 1.952271 2.783031 0.9092725 4689 Acetoacetate decarboxylase [Secondary metabolites biosynthesis, transport, and catabolism] Q Acetoacetate decarboxylase FALSE FALSE -7 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 32.600 0.463531086 0.13879908 0.428025096 1.222348e-01 FALSE 0.5 1.222348e-01 FALSE 0.1168470788 0.5586823 0.13279174 0.3501931 391038 44554 3014773 3014774 1 67 Same + + 6.6086502 0.52677185 0 5.921072e+00 499 1.952271 2.783031 0.9092725 4689 Acetoacetate decarboxylase [Secondary metabolites biosynthesis, transport, and catabolism] Q Acetoacetate decarboxylase 1.618504 2.363322 0.8551401 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] QR 3-hydroxybutyrate dehydrogenase Q FALSE FALSE -6 TRUE 1.8689933 1.0659270 0.86783122 0.7100317 0.8706304 Y 2.3518872 0.9315506 27.615 0.559060182 0.91989101 0.523375599 9.357289e-01 TRUE 0.5 9.357289e-01 TRUE 0.8380605270 0.9315506 0.80321631 0.8528020 391038 44554 3014774 3014775 1 11 Same + + 0.0000000 0.52677185 0 5.267718e-01 499 1.618504 2.363322 0.8551401 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] QR 3-hydroxybutyrate dehydrogenase 1.843191 2.622019 0.8649848 1752 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] R Patatin FALSE FALSE -5 TRUE 0.3665430 0.5744021 0.86783122 0.7100317 0.8706304 U 0.5172769 0.6411071 14.810 0.820367786 0.38968737 0.798196948 7.446377e-01 TRUE 0.5 7.446377e-01 TRUE 0.6579564559 0.6411071 0.29637071 0.4319661 391038 44554 3014779 3014780 1 190 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.998392 2.844631 0.9085720 3550 Uncharacterized protein related to capsule biosynthesis enzymes [General function prediction only] R HipA-like 2.229196 3.199927 0.9610501 1051 ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] F NUDIX hydrolase FALSE FALSE -4 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 41.380 0.234948481 0.13879908 0.210094641 4.716106e-02 FALSE 0.5 4.716106e-02 FALSE 0.0449130469 0.5586823 0.13279174 0.3501931 391038 44554 3014781 3014782 1 59 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.206709 3.302803 1.0431581 - - - putative signal peptide transmembrane protein 2.297253 3.432582 1.1304886 - - - conserved hypothetical protein TRUE FALSE -4 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 26.175 0.581876157 0.13879908 0.546540351 1.831993e-01 FALSE 0.5 1.831993e-01 FALSE 0.1756622572 0.5586823 0.13279174 0.3501931 391038 44554 3014784 3014785 1 57 Same - - 0.0000000 0.00000000 0 -9.418862e-01 NA 2.293184 3.262771 0.9918846 708 Exonuclease III [DNA replication, recombination, and repair] L exodeoxyribonuclease III Xth 1.647394 2.406230 0.9239957 - - - conserved hypothetical protein TRUE FALSE -5 TRUE 0.3665430 0.2293628 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5616071 25.815 0.589376016 0.14896193 0.554188420 2.007875e-01 FALSE 0.5 2.007875e-01 FALSE 0.1878270877 0.5616071 0.13876591 0.3528992 391038 44554 3014786 3014787 1 -3 Same + + 20.5227898 9.81444348 0 3.346015e+01 NA 1.645954 2.401976 0.8574850 - - - conserved hypothetical protein 1.427564 2.079538 0.7340159 443 Molecular chaperone [Posttranslational modification, protein turnover, chaperones] O putative DnaK-related protein (molecular chaperone) FALSE FALSE -5 TRUE 3.0724848 2.1381725 1.94073915 0.7100317 0.4836215 U 0.5172769 0.9511855 7.290 0.846003258 0.94404981 0.826326610 9.893270e-01 TRUE 0.5 9.893270e-01 TRUE 0.9650511846 0.9511855 0.83406356 0.8924174 391038 44554 3014787 3014788 1 13 Same + + 25.8672271 8.77976778 0 7.197548e+01 NA 1.427564 2.079538 0.7340159 443 Molecular chaperone [Posttranslational modification, protein turnover, chaperones] O putative DnaK-related protein (molecular chaperone) 1.811780 2.651965 0.8900856 443 Molecular chaperone [Posttranslational modification, protein turnover, chaperones] O DnaK-related protein O FALSE FALSE -4 TRUE 3.2999200 2.5527282 1.81026861 0.7100317 0.4836215 Y 2.3518872 0.9814716 15.750 0.801913534 0.97941842 0.778081147 9.948360e-01 TRUE 0.5 9.948360e-01 TRUE 0.9676782757 0.9814716 0.88088765 0.9575374 391038 44554 3014789 3014790 1 103 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 1.765448 2.576495 0.9174185 589 Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] T UspA 1.720195 2.470671 0.8787030 2930 Uncharacterized conserved protein [Function unknown] S Twin-arginine translocation pathway signal TRUE FALSE -4 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 33.155 0.450507761 0.13879908 0.415227222 1.167143e-01 FALSE 0.5 1.167143e-01 FALSE 0.1115389962 0.5586823 0.13279174 0.3501931 391038 44554 3014790 3014791 1 113 Same - - 0.0000000 0.00000000 0 -8.701138e-02 NA 1.720195 2.470671 0.8787030 2930 Uncharacterized conserved protein [Function unknown] S Twin-arginine translocation pathway signal 1.733398 2.481860 0.8629251 - - - conserved hypothetical protein TRUE FALSE -5 TRUE 0.3665430 0.2410265 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5612943 34.400 0.422877493 0.14788006 0.388231969 1.128156e-01 FALSE 0.5 1.128156e-01 FALSE 0.1050904211 0.5612943 0.13812758 0.3526091 391038 44554 3014794 3014795 1 40 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.128433 3.042230 0.9926278 - - - conserved hypothetical protein 1.849649 2.605066 0.9437573 - - - putative regulatory protein, FmdB family FALSE FALSE -5 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 22.590 0.657609446 0.13879908 0.624544126 2.363779e-01 FALSE 0.5 2.363779e-01 FALSE 0.2272617413 0.5586823 0.13279174 0.3501931 391038 44554 3014795 3014796 1 85 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.849649 2.605066 0.9437573 - - - putative regulatory protein, FmdB family 1.827496 2.664806 0.8859836 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family FALSE FALSE -4 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 30.625 0.507436002 0.13879908 0.471522871 1.423931e-01 FALSE 0.5 1.423931e-01 FALSE 0.1362548254 0.5586823 0.13279174 0.3501931 391038 44554 3014796 3014797 1 105 Same + + 3.8890335 -1.09195047 0 2.040950e+00 NA 1.827496 2.664806 0.8859836 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family 1.782583 2.601299 0.9133687 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 - FALSE FALSE -3 TRUE 1.3459828 0.7129244 0.18087842 0.7100317 0.4836215 N 0.6100158 0.6982797 33.450 0.443858402 0.52892153 0.408711274 4.726020e-01 FALSE 0.5 4.726020e-01 FALSE 0.3513427513 0.6982797 0.40428920 0.4962782 391038 44554 3014798 3014799 1 58 Same - - 0.0000000 -1.27655473 0 3.271118e-01 499 1.802408 2.608829 0.8955237 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family 1.937323 2.827842 0.9357543 642 Signal transduction histidine kinase [Signal transduction mechanisms] T periplasmic sensor signal transduction histidine kinase T TRUE FALSE -3 TRUE 0.3665430 0.5132791 0.17314809 0.7100317 0.8706304 Y 2.3518872 0.7558358 25.965 0.586246245 0.64781362 0.550994773 7.227034e-01 TRUE 0.5 7.227034e-01 TRUE 0.5946178862 0.7558358 0.50865413 0.5685596 391038 44554 3014799 3014800 1 99 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 1.937323 2.827842 0.9357543 642 Signal transduction histidine kinase [Signal transduction mechanisms] T periplasmic sensor signal transduction histidine kinase 1.951972 2.817774 0.9808087 - - - conserved hypothetical protein TRUE FALSE -4 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 32.765 0.459607742 0.13879908 0.424164663 1.205510e-01 FALSE 0.5 1.205510e-01 FALSE 0.1152278146 0.5586823 0.13279174 0.3501931 391038 44554 3014801 3014802 1 55 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 3.099276 4.372752 1.1431310 - - - hypothetical protein 1.774633 2.617786 1.0396212 - - - hypothetical protein FALSE FALSE -4 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 25.470 0.596598423 0.13879908 0.561569336 1.924780e-01 FALSE 0.5 1.924780e-01 FALSE 0.1846454652 0.5586823 0.13279174 0.3501931 391038 44554 3014802 3014803 1 60 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.774633 2.617786 1.0396212 - - - hypothetical protein 1.949992 2.806887 0.9250126 - - - conserved hypothetical protein FALSE FALSE -3 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 26.365 0.578094169 0.13879908 0.542689941 1.808876e-01 FALSE 0.5 1.808876e-01 FALSE 0.1734254194 0.5586823 0.13279174 0.3501931 391038 44554 3014803 3014804 1 221 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.949992 2.806887 0.9250126 - - - conserved hypothetical protein 1.732585 2.528648 0.9018628 2175 Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q Taurine catabolism dioxygenase TauD/TfdA FALSE FALSE -2 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 43.455 0.149560893 0.13879908 0.132179126 2.756250e-02 FALSE 0.5 2.756250e-02 FALSE 0.0262229771 0.5586823 0.13279174 0.3501931 391038 44554 3014805 3014806 1 56 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.071483 2.946313 0.9547181 2214 DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] O heat shock protein DnaJ-like 1.946717 2.760284 0.8809632 - - - conserved hypothetical protein TRUE FALSE -2 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 25.680 0.592198354 0.13879908 0.557070854 1.896571e-01 FALSE 0.5 1.896571e-01 FALSE 0.1819135563 0.5586823 0.13279174 0.3501931 391038 44554 3014806 3014807 1 487 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 1.946717 2.760284 0.8809632 - - - conserved hypothetical protein 2.354374 3.282630 1.0620553 - - - conserved hypothetical protein TRUE FALSE -3 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 50.155 0.010800147 0.13879908 0.009367339 1.756565e-03 FALSE 0.5 1.756565e-03 FALSE 0.0016690441 0.5586823 0.13279174 0.3501931 391038 44554 3014807 3014808 1 174 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.354374 3.282630 1.0620553 - - - conserved hypothetical protein 1.642555 2.316420 0.8274208 226 ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism] P phosphate ABC transporter, periplasmic phosphate-binding protein TRUE FALSE -4 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 40.380 0.274100140 0.13879908 0.246438776 5.736640e-02 FALSE 0.5 5.736640e-02 FALSE 0.0546598331 0.5586823 0.13279174 0.3501931 391038 44554 3014808 3014809 1 197 Same - - 0.0000000 -1.46833707 0 -1.958912e+00 499 1.642555 2.316420 0.8274208 226 ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism] P phosphate ABC transporter, periplasmic phosphate-binding protein 1.888136 2.761938 0.8861316 1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism] KE transcriptional regulator, GntR family - TRUE FALSE -5 TRUE 0.3665430 0.2219373 0.16997979 0.7100317 0.8706304 N 0.6100158 0.5641330 41.890 0.214185493 0.15765382 0.190979763 4.853730e-02 FALSE 0.5 4.853730e-02 FALSE 0.0438128743 0.5641330 0.14391491 0.3552470 391038 44554 3014811 3014812 1 95 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 1.870918 2.684568 0.9082707 389 Nucleotidyltransferase/DNA polymerase involved in DNA repair [DNA replication, recombination, and repair] L UMUC-like DNA-repair protein 2.730209 3.980464 1.1239104 - - - conserved hypothetical protein TRUE FALSE -6 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 32.140 0.474237608 0.13879908 0.438581977 1.269232e-01 FALSE 0.5 1.269232e-01 FALSE 0.1213574277 0.5586823 0.13279174 0.3501931 391038 44554 3014812 3014813 1 431 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.730209 3.980464 1.1239104 - - - conserved hypothetical protein 1.693196 2.403634 0.8245141 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M porin, Gram-negative type TRUE FALSE -7 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 49.495 0.015124701 0.13879908 0.013125785 2.468960e-03 FALSE 0.5 2.468960e-03 FALSE 0.0023460276 0.5586823 0.13279174 0.3501931 391038 44554 3014813 3014814 1 68 Same - - 0.0000000 4.07377421 0 3.901924e+00 499 1.693196 2.403634 0.8245141 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M porin, Gram-negative type 1.619593 2.292514 0.7809389 1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] G glycoside hydrolase, family 31 - TRUE FALSE -8 TRUE 0.3665430 0.8893297 1.31244586 0.7100317 0.8706304 N 0.6100158 0.7014546 27.795 0.556758222 0.53598833 0.521046945 5.919949e-01 TRUE 0.5 5.919949e-01 TRUE 0.4662249749 0.7014546 0.41015568 0.5000569 391038 44554 3014814 3014815 1 24 Same - - 1.8458267 3.75100082 0 4.975523e+00 499 1.619593 2.292514 0.7809389 1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] G glycoside hydrolase, family 31 1.703434 2.448640 0.8610626 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 G TRUE FALSE -9 TRUE 0.6488127 0.9882381 1.28507870 0.7100317 0.8706304 Y 2.3518872 0.8746188 18.850 0.738165069 0.84370975 0.709441906 9.383440e-01 TRUE 0.5 9.383440e-01 TRUE 0.8742654120 0.8746188 0.71151585 0.7480845 391038 44554 3014818 3014819 1 142 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.790580 2.598570 0.9155003 - - - putative glutathione S-transferase 1.988224 2.912357 0.9923776 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E Lysine exporter protein (LYSE/YGGA) FALSE FALSE -9 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 37.640 0.353681058 0.13879908 0.321546084 8.104758e-02 FALSE 0.5 8.104758e-02 FALSE 0.0773153717 0.5586823 0.13279174 0.3501931 391038 44554 3014820 3014821 1 -90 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.162599 3.157334 0.9937318 2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism] G extracellular endo alpha-1 4 polygalactosaminidase or related polysaccharide hydrolase-like 1.739050 2.524801 0.8502528 5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms] T diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) - TRUE FALSE -9 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 N 0.6100158 0.5704861 1.070 0.592066673 0.17917549 0.556936316 2.405936e-01 FALSE 0.5 2.405936e-01 FALSE 0.2125639429 0.5704861 0.15682357 0.3611971 391038 44554 3014821 3014822 1 92 Same - - 0.0000000 0.00000000 0 0.000000e+00 499 1.739050 2.524801 0.8502528 5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms] T diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 1.938053 2.748726 0.8912402 121 Predicted glutamine amidotransferase [General function prediction only] R conserved hypothetical protein TRUE FALSE -10 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 U 0.5172769 0.5858723 31.670 0.484850015 0.22936366 0.449078008 2.188251e-01 FALSE 0.5 2.188251e-01 FALSE 0.1787654918 0.5858723 0.18783870 0.3758784 391038 44554 3014822 3014823 1 61 Same - - 0.0000000 0.19313247 0 1.931325e-01 499 1.938053 2.748726 0.8912402 121 Predicted glutamine amidotransferase [General function prediction only] R conserved hypothetical protein 2.021285 2.913259 0.9773237 2095 Multiple antibiotic transporter [Intracellular trafficking and secretion] U multiple antibiotic resistance (MarC)-related proteins TRUE FALSE -11 TRUE 0.3665430 0.4909935 0.74303559 0.7100317 0.8706304 U 0.5172769 0.6262548 26.550 0.574706192 0.34935718 0.539244258 4.204839e-01 FALSE 0.5 4.204839e-01 FALSE 0.3305493035 0.6262548 0.26761041 0.4163382 391038 44554 3014824 3014825 1 -3 Same + + 5.5759491 0.35779707 0 4.519575e+01 NA 2.101808 3.067666 1.0300560 - - - conserved hypothetical protein 1.828447 2.655562 0.9062185 591 Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] ER Na+/solute symporter FALSE FALSE -11 TRUE 1.6884299 2.3158730 0.81519200 0.7100317 0.4836215 U 0.5172769 0.7766831 7.290 0.846003258 0.68653017 0.826326610 9.232636e-01 TRUE 0.5 9.232636e-01 TRUE 0.8682849426 0.7766831 0.54544604 0.5968685 391038 44554 3014826 3014827 1 -3 Same - - 46.4600019 -20.27024522 0 4.626267e+01 40 2.072932 3.042154 0.8961766 2875 Precorrin-4 methylase [Coenzyme metabolism] H precorrin-4 C11-methyltransferase 1.940308 2.804295 0.8892772 2099 Precorrin-6x reductase [Coenzyme metabolism] H precorrin-6x reductase H TRUE FALSE -11 TRUE 3.7002424 2.3249258 0.08996403 0.7100317 2.3910360 Y 2.3518872 0.9788979 7.290 0.846003258 0.97649792 0.826326610 9.956381e-01 TRUE 0.5 9.956381e-01 TRUE 0.9750932185 0.9788979 0.87694374 0.9518024 391038 44554 3014827 3014828 1 -3 Same - - 35.0670608 7.47796888 0 6.172516e+01 40 1.940308 2.804295 0.8892772 2099 Precorrin-6x reductase [Coenzyme metabolism] H precorrin-6x reductase 1.654083 2.388323 0.8181841 1903 Cobalamin biosynthesis protein CbiD [Coenzyme metabolism] H cobalamin biosynthesis protein CbiD H TRUE FALSE -12 TRUE 3.5519143 2.4673233 1.64226356 0.7100317 2.3910360 Y 2.3518872 0.9902291 7.290 0.846003258 0.98924235 0.826326610 9.980244e-01 TRUE 0.5 9.980244e-01 TRUE 0.9789297639 0.9902291 0.89425938 0.9773464 391038 44554 3014828 3014829 1 0 Same - - 39.4867447 12.55999994 0 1.062836e+02 40 1.654083 2.388323 0.8181841 1903 Cobalamin biosynthesis protein CbiD [Coenzyme metabolism] H cobalamin biosynthesis protein CbiD 1.829675 2.675490 0.9072319 2242 Precorrin-6B methylase 2 [Coenzyme metabolism] H precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit H TRUE FALSE -13 TRUE 3.6113535 2.7457203 2.17084029 0.7100317 2.3910360 Y 2.3518872 0.9929144 10.720 0.860484012 0.99221997 0.842312746 9.987303e-01 TRUE 0.5 9.987303e-01 TRUE 0.9819834178 0.9929144 0.89834469 0.9835133 391038 44554 3014830 3014831 1 -19 Same + + 15.5523998 7.65875573 0 1.321191e+02 499 2.122678 3.091781 0.9648303 155 Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism] P precorrin-3B synthase 1.704994 2.513563 0.8897444 2082 Precorrin isomerase [Coenzyme metabolism] H Precorrin-8X methylmutase CbiC/CobH - FALSE FALSE -13 TRUE 2.7593502 2.8481257 1.65932501 0.7100317 0.8706304 N 0.6100158 0.9340304 2.835 0.706933907 0.92299820 0.676287149 9.665712e-01 TRUE 0.5 9.665712e-01 TRUE 0.9098686163 0.9340304 0.80713380 0.8576990 391038 44554 3014831 3014832 1 1 Same + + 69.8484397 6.87995489 0 1.177281e+02 40 1.704994 2.513563 0.8897444 2082 Precorrin isomerase [Coenzyme metabolism] H Precorrin-8X methylmutase CbiC/CobH 1.619103 2.383567 0.8374457 2243 Precorrin-2 methylase [Coenzyme metabolism] H precorrin-2 C20-methyltransferase H FALSE FALSE -12 TRUE 3.9332854 2.7973827 1.57708128 0.7100317 2.3910360 Y 2.3518872 0.9920948 11.340 0.857926271 0.99131290 0.839484015 9.985509e-01 TRUE 0.5 9.985509e-01 TRUE 0.9813588405 0.9920948 0.89709856 0.9816264 391038 44554 3014832 3014833 1 -3 Same + + 23.1881526 8.03647885 0 7.196702e+01 6 1.619103 2.383567 0.8374457 2243 Precorrin-2 methylase [Coenzyme metabolism] H precorrin-2 C20-methyltransferase 1.864710 2.783401 0.9461543 1010 Precorrin-3B methylase [Coenzyme metabolism] H precorrin-3B C17-methyltransferase H FALSE FALSE -11 TRUE 3.2044561 2.5513593 1.69307943 0.7100317 3.3461567 Y 2.3518872 0.9905388 7.290 0.846003258 0.98958662 0.826326610 9.980882e-01 TRUE 0.5 9.980882e-01 TRUE 0.9790325807 0.9905388 0.89473093 0.9780554 391038 44554 3014833 3014834 1 161 Same + + 0.0000000 0.00000000 0 0.000000e+00 499 1.864710 2.783401 0.9461543 1010 Precorrin-3B methylase [Coenzyme metabolism] H precorrin-3B C17-methyltransferase 1.545130 2.223861 0.8031923 - - - type IV pilus assembly PilZ FALSE FALSE -10 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 U 0.5172769 0.5858723 39.315 0.314450838 0.22936366 0.284312306 1.201194e-01 FALSE 0.5 1.201194e-01 FALSE 0.0959109388 0.5858723 0.18783870 0.3758784 391038 44554 3014835 3014836 1 52 Same - - 0.0000000 0.00000000 0 0.000000e+00 499 1.877740 2.709122 0.9070072 2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane] M OmpA/MotB 1.954343 2.841258 0.9690498 - - - Haemagluttinin motif TRUE FALSE -10 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 U 0.5172769 0.5858723 24.905 0.608488090 0.22936366 0.573753803 3.162744e-01 FALSE 0.5 3.162744e-01 FALSE 0.2644135023 0.5858723 0.18783870 0.3758784 391038 44554 3014836 3014837 1 453 Same - - 0.0000000 0.00000000 0 0.000000e+00 499 1.954343 2.841258 0.9690498 - - - Haemagluttinin motif 3.070435 4.410552 1.1330846 1240 Mg-chelatase subunit ChlD [Coenzyme metabolism] H magnesium chelatase subunit ChlD TRUE FALSE -11 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 U 0.5172769 0.5858723 49.830 0.012775041 0.22936366 0.011083168 3.836647e-03 FALSE 0.5 3.836647e-03 FALSE 0.0029839471 0.5858723 0.18783870 0.3758784 391038 44554 3014837 3014838 1 30 Same - - 1.6661333 6.31231656 0 2.792157e+01 499 3.070435 4.410552 1.1330846 1240 Mg-chelatase subunit ChlD [Coenzyme metabolism] H magnesium chelatase subunit ChlD 2.374591 3.504110 1.0188831 1239 Mg-chelatase subunit ChlI [Coenzyme metabolism] H magnesium chelatase, ChlI subunit H TRUE FALSE -12 TRUE 0.5740166 2.0294414 1.51940629 0.7100317 0.8706304 Y 2.3518872 0.8709930 20.340 0.706432021 0.83852074 0.675756851 9.259020e-01 TRUE 0.5 9.259020e-01 TRUE 0.8522086333 0.8709930 0.70555906 0.7418795 391038 44554 3014838 3014839 1 -3 Same - - 18.5965817 -19.78349248 0 2.817150e+01 499 2.374591 3.504110 1.0188831 1239 Mg-chelatase subunit ChlI [Coenzyme metabolism] H magnesium chelatase, ChlI subunit 1.841345 2.656285 0.8643855 1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases [Coenzyme metabolism] H cobaltochelatase, CobN subunit H TRUE FALSE -13 TRUE 2.9691309 2.0377654 0.09039697 0.7100317 0.8706304 Y 2.3518872 0.9468570 7.290 0.846003258 0.93881007 0.826326610 9.882748e-01 TRUE 0.5 9.882748e-01 TRUE 0.9633915424 0.9468570 0.82729678 0.8835159 391038 44554 3014839 3014840 1 11 Same - - 11.2108386 11.21478811 0 8.293374e+01 NA 1.841345 2.656285 0.8643855 1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases [Coenzyme metabolism] H cobaltochelatase, CobN subunit 1.727919 2.480404 0.8493128 523 Putative GTPases (G3E family) [General function prediction only] R cobalamin biosynthesis protein CobW TRUE FALSE -14 TRUE 2.4374744 2.6231118 2.03942161 0.7100317 0.4836215 U 0.5172769 0.9238102 14.810 0.820367786 0.91008494 0.798196948 9.788246e-01 TRUE 0.5 9.788246e-01 TRUE 0.9452922554 0.9238102 0.79094774 0.8377079 391038 44554 3014841 3014842 1 -3 Same + + 0.0000000 0.00000000 0 0.000000e+00 40 2.597909 3.757844 1.0729711 7 Uroporphyrinogen-III methylase [Coenzyme metabolism] H uroporphyrin-III C-methyltransferase 2.061098 2.992052 0.9679178 - - - cobalamin (vitamin B12) biosynthesis CbiG protein FALSE FALSE -14 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 2.3910360 U 0.5172769 0.6864209 7.290 0.846003258 0.50194811 0.826326610 8.470157e-01 TRUE 0.5 8.470157e-01 TRUE 0.7727018898 0.6864209 0.38226137 0.4823656 391038 44554 3014842 3014843 1 -3 Same + + 2.9704145 5.19928312 0 2.285992e+00 40 2.061098 2.992052 0.9679178 - - - cobalamin (vitamin B12) biosynthesis CbiG protein 1.465865 2.076685 0.7811748 2109 ATP:corrinoid adenosyltransferase [Coenzyme metabolism] H cob(I)alamin adenosyltransferase FALSE FALSE -13 TRUE 1.0767152 0.7407325 1.40931511 0.7100317 2.3910360 U 0.5172769 0.8643315 7.290 0.846003258 0.82887366 0.826326610 9.637802e-01 TRUE 0.5 9.637802e-01 TRUE 0.9258896406 0.8643315 0.69457756 0.7306130 391038 44554 3014843 3014844 1 4 Same + + 33.9676314 -0.30266603 0 1.356238e+02 40 1.465865 2.076685 0.7811748 2109 ATP:corrinoid adenosyltransferase [Coenzyme metabolism] H cob(I)alamin adenosyltransferase 1.730981 2.547218 0.8733330 1797 Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] H CobB/CobQ-like glutamine amidotransferase H FALSE FALSE -12 TRUE 3.5185642 2.8627165 0.20472642 0.7100317 2.3910360 Y 2.3518872 0.9760730 12.620 0.849881307 0.97327459 0.830600952 9.951731e-01 TRUE 0.5 9.951731e-01 TRUE 0.9748611908 0.9760730 0.87260737 0.9455520 391038 44554 3014844 3014845 1 -16 Same + + 8.1106712 -6.43752723 0 1.728807e+01 499 1.730981 2.547218 0.8733330 1797 Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] H CobB/CobQ-like glutamine amidotransferase 1.682804 2.459304 0.8900259 778 Nitroreductase [Energy production and conversion] C cob(II)yrinic acid a,c-diamide reductase - FALSE FALSE -11 TRUE 2.1120659 1.7763130 0.11532103 0.7100317 0.8706304 N 0.6100158 0.7980788 3.040 0.717633454 0.72416186 0.687611152 8.696597e-01 TRUE 0.5 8.696597e-01 TRUE 0.7801396766 0.7980788 0.58266609 0.6272233 391038 44554 3014846 3014847 1 863 Same - - 0.0000000 -3.62443889 0 -4.597526e+00 499 1.842512 2.667852 0.9167011 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family 1.944868 2.865740 0.9360721 1349 Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] KG transcriptional regulator, DeoR family K TRUE FALSE -11 TRUE 0.3665430 0.2176176 0.13340394 0.7100317 0.8706304 Y 2.3518872 0.7574804 51.980 0.003916877 0.65094525 0.003394109 7.279845e-03 FALSE 0.5 7.279845e-03 FALSE 0.0041017752 0.7574804 0.51157561 0.5707492 391038 44554 3014851 3014852 1 61 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.267929 3.230089 0.9805203 - - - long-chain acyl-CoA synthetases (AMP-forming) 2.222261 3.157945 0.9939648 - - - transposase IS3/IS911 TRUE FALSE -12 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 26.550 0.574706192 0.13879908 0.539244258 1.788407e-01 FALSE 0.5 1.788407e-01 FALSE 0.1714453211 0.5586823 0.13279174 0.3501931 391038 44554 3014852 3014853 1 1332 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.222261 3.157945 0.9939648 - - - transposase IS3/IS911 2.953370 4.255932 1.0559016 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family TRUE FALSE -13 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 52.400 0.003052003 0.13879908 0.002644360 4.931515e-04 FALSE 0.5 4.931515e-04 FALSE 0.0004685507 0.5586823 0.13279174 0.3501931 391038 44554 3014856 3014857 1 -7 Same + + 0.0000000 0.00000000 0 -2.566478e-01 499 2.847409 4.015021 1.0455745 1816 Adenosine deaminase [Nucleotide transport and metabolism] F adenosine deaminase 3.711545 5.344638 1.1996475 1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Energy production and conversion] C FMN-dependent alpha-hydroxy acid dehydrogenase - FALSE FALSE -13 TRUE 0.3665430 0.2371166 0.42558877 0.7100317 0.8706304 N 0.6100158 0.6001217 4.025 0.762080695 0.27354854 0.735039361 5.467204e-01 TRUE 0.5 5.467204e-01 TRUE 0.4691612137 0.6001217 0.21625375 0.3898282 391038 44554 3014857 3014858 1 365 Same + + 0.0000000 -0.97386058 0 -1.299644e+00 499 3.711545 5.344638 1.1996475 1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Energy production and conversion] C FMN-dependent alpha-hydroxy acid dehydrogenase 3.396877 4.810281 1.0995405 715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] P conserved hypothetical protein - FALSE FALSE -12 TRUE 0.3665430 0.2262239 0.18431167 0.7100317 0.8706304 N 0.6100158 0.5660807 48.300 0.026640886 0.16430318 0.023155749 5.352320e-03 FALSE 0.5 5.352320e-03 FALSE 0.0047273973 0.5660807 0.14787878 0.3570643 391038 44554 3014858 3014859 1 102 Same + + 0.0000000 0.00000000 0 -9.531018e-02 NA 3.396877 4.810281 1.0995405 715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] P conserved hypothetical protein 3.088216 4.430699 1.0961078 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family - FALSE FALSE -11 TRUE 0.3665430 0.2407300 0.42558877 0.7100317 0.4836215 N 0.6100158 0.5730895 33.080 0.452226129 0.18785695 0.416913121 1.603433e-01 FALSE 0.5 1.603433e-01 FALSE 0.1377155503 0.5730895 0.16209602 0.3636541 391038 44554 3014860 3014861 1 7 Same - - 0.0000000 0.00000000 0 0.000000e+00 4 3.002340 4.307259 1.0101395 - - - S-adenosyl-L-homocysteine hydrolase 2.703931 3.897608 1.1349378 - - - adenosylhomocysteinase TRUE FALSE -11 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 3.5321208 U 0.5172769 0.7523244 13.555 0.841286513 0.64108129 0.821134611 9.044685e-01 TRUE 0.5 9.044685e-01 TRUE 0.8425669348 0.7523244 0.50240524 0.5639088 391038 44554 3014861 3014862 1 63 Same - - 0.0000000 0.00000000 0 0.000000e+00 4 2.703931 3.897608 1.1349378 - - - adenosylhomocysteinase 3.067274 4.307482 1.0695533 - - - S-adenosyl-L-homocysteine hydrolase TRUE FALSE -12 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 3.5321208 U 0.5172769 0.7523244 26.890 0.569119492 0.64108129 0.533569793 7.023095e-01 TRUE 0.5 7.023095e-01 TRUE 0.5714772033 0.7523244 0.50240524 0.5639088 391038 44554 3014863 3014864 1 -3 Same + + 2.3136349 0.54773018 0 2.540457e+00 249 2.687108 3.916252 1.0960833 1042 Acyl-CoA synthetase (NDP forming) [Energy production and conversion] C CoA-binding 2.451659 3.459090 0.9892757 1024 Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] I Enoyl-CoA hydratase/isomerase - FALSE FALSE -12 TRUE 0.8841342 0.7642755 0.87126952 0.7100317 1.4866469 N 0.6100158 0.7644278 7.290 0.846003258 0.66402608 0.826326610 9.156670e-01 TRUE 0.5 9.156670e-01 TRUE 0.8580501882 0.7644278 0.52388113 0.5800805 391038 44554 3014864 3014865 1 46 Same + + 1.7272209 -0.86336833 0 -1.103565e+00 499 2.451659 3.459090 0.9892757 1024 Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] I Enoyl-CoA hydratase/isomerase 3.049134 4.359025 1.0916090 1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter related - FALSE FALSE -11 TRUE 0.6085585 0.2280820 0.18636237 0.7100317 0.8706304 N 0.6100158 0.6105377 23.945 0.628811904 0.30454178 0.594679651 4.258901e-01 FALSE 0.5 4.258901e-01 FALSE 0.3445770871 0.6105377 0.23683942 0.4002476 391038 44554 3014865 3014866 1 0 Same + + 22.4399565 4.90339000 0 3.854981e+01 499 3.049134 4.359025 1.0916090 1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter related 3.009603 4.281387 1.0355286 600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] P binding-protein-dependent transport systems inner membrane component P FALSE FALSE -10 TRUE 3.1705692 2.2215021 1.38458568 0.7100317 0.8706304 Y 2.3518872 0.9774680 10.720 0.860484012 0.97486871 0.842312746 9.958377e-01 TRUE 0.5 9.958377e-01 TRUE 0.9773113454 0.9774680 0.87474979 0.9486329 391038 44554 3014866 3014867 1 42 Same + + 0.0000000 -0.79600457 0 -1.688241e+00 NA 3.009603 4.281387 1.0355286 600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] P binding-protein-dependent transport systems inner membrane component 3.067751 4.453995 1.1208125 5496 Predicted thioesterase [General function prediction only] R hypothetical protein FALSE FALSE -9 TRUE 0.3665430 0.2239084 0.18847147 0.7100317 0.4836215 U 0.5172769 0.5273318 23.040 0.648028949 0.02278407 0.614580677 4.115990e-02 FALSE 0.5 4.115990e-02 FALSE 0.1183217511 0.5273318 0.06793786 0.3220055 391038 44554 3014867 3014868 1 13 Same + + 0.0000000 -0.73826762 0 -1.117352e+00 NA 3.067751 4.453995 1.1208125 5496 Predicted thioesterase [General function prediction only] R hypothetical protein 2.644412 3.794630 1.0337426 235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] G class II aldolase/adducin-like FALSE FALSE -8 TRUE 0.3665430 0.2279734 0.19063967 0.7100317 0.4836215 U 0.5172769 0.5275379 15.750 0.801913534 0.02359172 0.778081147 8.909887e-02 FALSE 0.5 8.909887e-02 FALSE 0.2290438253 0.5275379 0.06836913 0.3221861 391038 44554 3014868 3014869 1 -3 Same + + 0.0000000 1.39843909 0 1.303129e+00 NA 2.644412 3.794630 1.0337426 235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] G class II aldolase/adducin-like 3.184047 4.596367 1.1380703 111 Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] E D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding - FALSE FALSE -7 TRUE 0.3665430 0.6527525 1.00389107 0.7100317 0.4836215 N 0.6100158 0.6429557 7.290 0.846003258 0.39457672 0.826326610 7.816790e-01 TRUE 0.5 7.816790e-01 TRUE 0.7018150658 0.6429557 0.29992906 0.4339408 391038 44554 3014869 3014870 1 82 Same + + 0.0000000 0.00000000 0 -2.597549e-02 499 3.184047 4.596367 1.1380703 111 Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] E D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 3.070116 4.331746 1.0647160 1816 Adenosine deaminase [Nucleotide transport and metabolism] F adenosine deaminase - FALSE FALSE -6 TRUE 0.3665430 0.2424278 0.42558877 0.7100317 0.8706304 N 0.6100158 0.5999829 30.110 0.518151004 0.27312816 0.482221951 2.877836e-01 FALSE 0.5 2.877836e-01 FALSE 0.2285313323 0.5999829 0.21597832 0.3896906 391038 44554 3014871 3014872 1 264 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 3.139150 4.409786 1.1048793 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M porin, Gram-negative type 3.175973 4.567895 1.1095933 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family - TRUE FALSE -6 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 N 0.6100158 0.5704861 45.520 0.080364761 0.17917549 0.070359545 1.871854e-02 FALSE 0.5 1.871854e-02 FALSE 0.0159934049 0.5704861 0.15682357 0.3611971 391038 44554 3014873 3014874 1 0 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.821446 4.012883 1.0938512 2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion] C xenobiotic compound monooxygenase, DszA family, A subunit 2.749726 4.002523 1.0630287 1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only] R flavin reductase-like, FMN-binding FALSE FALSE -6 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 10.720 0.860484012 0.13879908 0.842312746 4.985039e-01 FALSE 0.5 4.985039e-01 FALSE 0.4857085673 0.5586823 0.13279174 0.3501931 391038 44554 3014874 3014875 1 98 Same + + 0.0000000 -1.21850090 0 -1.218501e+00 NA 2.749726 4.002523 1.0630287 1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only] R flavin reductase-like, FMN-binding 3.298699 4.799155 1.1246049 - - - conserved hypothetical protein FALSE FALSE -5 TRUE 0.3665430 0.2270823 0.17643340 0.7100317 0.4836215 U 0.5172769 0.5254883 32.600 0.463531086 0.01831895 0.428025096 1.586785e-02 FALSE 0.5 1.586785e-02 FALSE 0.0558518071 0.5254883 0.06407710 0.3203933 391038 44554 3014875 3014876 1 -3 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 3.298699 4.799155 1.1246049 - - - conserved hypothetical protein 2.958923 4.324048 1.1301991 591 Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] ER Na+/solute symporter FALSE FALSE -4 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 7.290 0.846003258 0.13879908 0.826326610 4.696103e-01 FALSE 0.5 4.696103e-01 FALSE 0.4568810272 0.5586823 0.13279174 0.3501931 391038 44554 3014876 3014877 1 20 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.958923 4.324048 1.1301991 591 Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] ER Na+/solute symporter 3.471041 4.943738 1.0983056 - - - hypothetical protein FALSE FALSE -3 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 17.800 0.762802713 0.13879908 0.735814994 3.413704e-01 FALSE 0.5 3.413704e-01 FALSE 0.3299547024 0.5586823 0.13279174 0.3501931 391038 44554 3014878 3014879 1 168 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 4.279104 6.107997 1.0745644 - - - C4-dicarboxylate transport protein 4.656225 6.676876 1.1807617 - - - putative c4-dicarboxylate transport transmembrane protein TRUE FALSE -3 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 39.765 0.297446751 0.13879908 0.268300145 6.387707e-02 FALSE 0.5 6.387707e-02 FALSE 0.0608831694 0.5586823 0.13279174 0.3501931 391038 44554 3014881 3014882 1 251 Same - - 0.0000000 -3.62443889 0 -3.691130e+00 NA 2.070027 2.918359 0.9300345 5042 Purine nucleoside permease [Nucleotide transport and metabolism] F purine nucleoside permease 1.780717 2.601355 0.8460724 53 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] P cation diffusion facilitator family transporter - TRUE FALSE -4 TRUE 0.3665430 0.2183554 0.13340394 0.7100317 0.4836215 N 0.6100158 0.5314122 44.950 0.097048508 0.03865890 0.085158545 4.303516e-03 FALSE 0.5 4.303516e-03 FALSE 0.0088202976 0.5314122 0.07646452 0.3255916 391038 44554 3014882 3014883 1 44 Same - - 0.0000000 0.00000000 0 -6.316285e-01 499 1.780717 2.601355 0.8460724 53 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] P cation diffusion facilitator family transporter 1.620986 2.367766 0.8562885 709 Selenophosphate synthase [Amino acid transport and metabolism] E selenide, water dikinase - TRUE FALSE -5 TRUE 0.3665430 0.2321590 0.42558877 0.7100317 0.8706304 N 0.6100158 0.6002513 23.565 0.636879623 0.27394071 0.603020882 3.982233e-01 FALSE 0.5 3.982233e-01 FALSE 0.3264532616 0.6002513 0.21651080 0.3899567 391038 44554 3014883 3014884 1 136 Same - - 0.0000000 -7.15894757 0 -1.282852e+01 499 1.620986 2.367766 0.8562885 709 Selenophosphate synthase [Amino acid transport and metabolism] E selenide, water dikinase 1.720514 2.481561 0.8611771 2902 NAD-specific glutamate dehydrogenase [Amino acid transport and metabolism] E NAD-glutamate dehydrogenase E TRUE FALSE -6 TRUE 0.3665430 0.2175575 0.11274222 0.7100317 0.8706304 Y 2.3518872 0.7552521 37.065 0.361957354 0.64669886 0.329453717 5.094192e-01 TRUE 0.5 5.094192e-01 TRUE 0.3690229492 0.7552521 0.50761643 0.5677842 391038 44554 3014884 3014885 1 277 Same - - 0.0000000 -0.69539860 0 -1.927640e+00 499 1.720514 2.481561 0.8611771 2902 NAD-specific glutamate dehydrogenase [Amino acid transport and metabolism] E NAD-glutamate dehydrogenase 1.933900 2.834184 0.9434336 2267 Lysophospholipase [Lipid metabolism] I alpha/beta hydrolase fold - TRUE FALSE -7 TRUE 0.3665430 0.2220134 0.19220843 0.7100317 0.8706304 N 0.6100158 0.5673287 46.035 0.066973192 0.16853992 0.058529086 1.434151e-02 FALSE 0.5 1.434151e-02 FALSE 0.0125490057 0.5673287 0.15041576 0.3582320 391038 44554 3014885 3014886 1 -3 Same - - 9.3413931 5.51256044 0 3.500695e+01 499 1.933900 2.834184 0.9434336 2267 Lysophospholipase [Lipid metabolism] I alpha/beta hydrolase fold 1.849663 2.647406 0.9162559 - - - Peptidase M14, carboxypeptidase A TRUE FALSE -8 TRUE 2.2515756 2.1615978 1.43945871 0.7100317 0.8706304 U 0.5172769 0.8970635 7.290 0.846003258 0.87489794 0.826326610 9.746319e-01 TRUE 0.5 9.746319e-01 TRUE 0.9422402282 0.8970635 0.74807578 0.7876817 391038 44554 3014887 3014888 1 95 Same + + 21.3960485 6.62282752 0 2.681344e+02 499 1.821484 2.609899 0.9095928 3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] P phosphonate ABC transporter, ATPase subunit 1.553500 2.189694 0.7940628 3221 ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism] P phosphonate ABC transporter, periplasmic phosphonate-binding protein P FALSE FALSE -8 TRUE 3.1296912 3.1430625 1.55225093 0.7100317 0.8706304 Y 2.3518872 0.9767283 32.140 0.474237608 0.97402398 0.438581977 9.712828e-01 TRUE 0.5 9.712828e-01 TRUE 0.8617804208 0.9767283 0.87361399 0.9469978 391038 44554 3014888 3014889 1 -3 Same + + 20.1387644 5.98149684 0 1.885526e+02 5 1.553500 2.189694 0.7940628 3221 ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism] P phosphonate ABC transporter, periplasmic phosphonate-binding protein 2.339160 3.488773 1.0189053 3639 ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism] P phosphonate ABC transporter, inner membrane subunit P FALSE FALSE -7 TRUE 3.0488224 3.0033716 1.49161302 0.7100317 3.4239331 Y 2.3518872 0.9877353 7.290 0.846003258 0.98646264 0.826326610 9.975082e-01 TRUE 0.5 9.975082e-01 TRUE 0.9780980104 0.9877353 0.89045924 0.9716587 391038 44554 3014889 3014890 1 136 Same + + 0.0000000 -3.75185531 0 -2.427148e+00 NA 2.339160 3.488773 1.0189053 3639 ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism] P phosphonate ABC transporter, inner membrane subunit 1.864692 2.755627 0.9531670 - - - conserved hypothetical protein FALSE FALSE -6 TRUE 0.3665430 0.2205650 0.12871424 0.7100317 0.4836215 U 0.5172769 0.5186936 37.065 0.361957354 0.01831895 0.329453717 1.047525e-02 FALSE 0.5 1.047525e-02 FALSE 0.0288742249 0.5186936 0.04980140 0.3144929 391038 44554 3014894 3014895 1 32 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.796933 2.558111 0.8352817 1012 NAD-dependent aldehyde dehydrogenases [Energy production and conversion] C succinic semialdehyde dehydrogenase 3.659088 5.317371 1.1341733 - - - hypothetical protein FALSE FALSE -5 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 20.910 0.694226462 0.13879908 0.662884540 2.678914e-01 FALSE 0.5 2.678914e-01 FALSE 0.2579705167 0.5586823 0.13279174 0.3501931 391038 44554 3014896 3014897 1 73 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.374765 3.477494 1.0475532 - - - conserved hypothetical protein 2.253886 3.261019 0.9558855 - - - Hemerythrin HHE cation binding region TRUE FALSE -5 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 28.745 0.543944268 0.13879908 0.508112701 1.612349e-01 FALSE 0.5 1.612349e-01 FALSE 0.1544306094 0.5586823 0.13279174 0.3501931 391038 44554 3014897 3014898 1 -25 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.253886 3.261019 0.9558855 - - - Hemerythrin HHE cation binding region 2.377769 3.632631 1.1014188 - - - hypothetical protein TRUE FALSE -6 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 2.525 0.689741255 0.13879908 0.658165969 2.637845e-01 FALSE 0.5 2.637845e-01 FALSE 0.2539628847 0.5586823 0.13279174 0.3501931 391038 44554 3014898 3014899 1 -3 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.377769 3.632631 1.1014188 - - - hypothetical protein 2.235506 3.380189 1.0735913 - - - hypothetical protein TRUE FALSE -7 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 7.290 0.846003258 0.13879908 0.826326610 4.696103e-01 FALSE 0.5 4.696103e-01 FALSE 0.4568810272 0.5586823 0.13279174 0.3501931 391038 44554 3014900 3014901 1 -3 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 1.745808 2.536859 0.9675935 - - - CsbD-like 3.336632 4.721709 1.0991653 - - - hypothetical protein FALSE FALSE -7 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 7.290 0.846003258 0.13879908 0.826326610 4.696103e-01 FALSE 0.5 4.696103e-01 FALSE 0.4568810272 0.5586823 0.13279174 0.3501931 391038 44554 3014902 3014903 1 62 Same - - 0.0000000 0.00000000 0 -1.201443e-01 NA 2.047288 2.951513 0.9278820 624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] E amidase, hydantoinase/carbamoylase family 2.452773 3.452660 0.9641813 - - - protein of unknown function DUF1130 TRUE FALSE -7 TRUE 0.3665430 0.2399813 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5613223 26.725 0.571736891 0.14797706 0.536227166 1.882204e-01 FALSE 0.5 1.882204e-01 FALSE 0.1763161826 0.5613223 0.13818479 0.3526351 391038 44554 3014903 3014904 1 108 Same - - 0.0000000 -2.49792379 0 -2.963168e+00 NA 2.452773 3.452660 0.9641813 - - - protein of unknown function DUF1130 2.228173 3.308239 1.0097217 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family TRUE FALSE -8 TRUE 0.3665430 0.2192505 0.14404651 0.7100317 0.4836215 U 0.5172769 0.5209703 33.780 0.436556953 0.01831895 0.401570519 1.425236e-02 FALSE 0.5 1.425236e-02 FALSE 0.0428251115 0.5209703 0.05459278 0.3164626 391038 44554 3014905 3014906 1 66 Same + + 0.0000000 0.70029891 0 2.682910e-01 NA 1.771720 2.564743 0.9043340 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] QR short-chain dehydrogenase/reductase SDR 2.210485 3.214529 1.0022362 1741 Pirin-related protein [General function prediction only] R Pirin-like FALSE FALSE -8 TRUE 0.3665430 0.5042691 0.90352748 0.7100317 0.4836215 U 0.5172769 0.6218957 27.425 0.561537841 0.33715479 0.525883724 3.944622e-01 FALSE 0.5 3.944622e-01 FALSE 0.3093439121 0.6218957 0.25911105 0.4118303 391038 44554 3014907 3014908 1 372 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 3.146072 4.430457 1.0910091 - - - hypothetical protein 2.670332 3.732208 1.0701271 - - - hypothetical protein TRUE FALSE -8 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 48.515 0.024160941 0.13879908 0.020993231 3.974552e-03 FALSE 0.5 3.974552e-03 FALSE 0.0037769382 0.5586823 0.13279174 0.3501931 391038 44554 3014908 3014909 1 25 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.670332 3.732208 1.0701271 - - - hypothetical protein 2.659839 3.781660 1.0105044 - - - hypothetical protein TRUE FALSE -9 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 19.125 0.731874201 0.13879908 0.702738841 3.055200e-01 FALSE 0.5 3.055200e-01 FALSE 0.2947666394 0.5586823 0.13279174 0.3501931 391038 44554 3014909 3014910 1 103 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.659839 3.781660 1.0105044 - - - hypothetical protein 2.905046 4.235783 1.1263882 1835 Predicted acyltransferases [Lipid metabolism] I acyltransferase 3 TRUE FALSE -10 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 33.155 0.450507761 0.13879908 0.415227222 1.167143e-01 FALSE 0.5 1.167143e-01 FALSE 0.1115389962 0.5586823 0.13279174 0.3501931 391038 44554 3014910 3014911 1 319 Same - - 0.0000000 0.00000000 0 0.000000e+00 499 2.905046 4.235783 1.1263882 1835 Predicted acyltransferases [Lipid metabolism] I acyltransferase 3 2.640136 3.826212 1.0630483 3391 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein TRUE FALSE -11 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 U 0.5172769 0.5858723 47.295 0.041078825 0.22936366 0.035774349 1.258949e-02 FALSE 0.5 1.258949e-02 FALSE 0.0098106132 0.5858723 0.18783870 0.3758784 391038 44554 3014911 3014912 1 186 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.640136 3.826212 1.0630483 3391 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein 2.285878 3.322652 0.9983415 - - - hypothetical protein TRUE FALSE -12 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 41.040 0.248479607 0.13879908 0.222610884 5.059234e-02 FALSE 0.5 5.059234e-02 FALSE 0.0481890459 0.5586823 0.13279174 0.3501931 391038 44554 3014916 3014917 1 107 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.878907 4.104446 1.0244138 - - - hypothetical protein 2.790723 3.860716 1.0702057 - - - hypothetical protein TRUE FALSE -13 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 33.675 0.438870415 0.13879908 0.403831459 1.119428e-01 FALSE 0.5 1.119428e-01 FALSE 0.1069534683 0.5586823 0.13279174 0.3501931 391038 44554 3014917 3014918 1 75 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.790723 3.860716 1.0702057 - - - hypothetical protein 1.962961 2.794931 0.9534160 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M porin, Gram-negative type TRUE FALSE -14 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 29.095 0.538272981 0.13879908 0.502403447 1.581699e-01 FALSE 0.5 1.581699e-01 FALSE 0.1514716319 0.5586823 0.13279174 0.3501931 391038 44554 3014918 3014919 1 313 Same - - 0.0000000 0.00000000 0 0.000000e+00 499 1.962961 2.794931 0.9534160 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M porin, Gram-negative type 1.825025 2.649022 0.8867770 329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane] EM dihydrodipicolinate synthetase M TRUE FALSE -15 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 Y 2.3518872 0.7853051 47.050 0.045386235 0.70194167 0.039548487 1.006940e-01 FALSE 0.5 1.006940e-01 FALSE 0.0571695258 0.7853051 0.56051008 0.6089375 391038 44554 3014919 3014920 1 58 Same - - 0.0000000 3.22252270 0 3.117162e+00 499 1.825025 2.649022 0.8867770 329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane] EM dihydrodipicolinate synthetase 1.843115 2.701137 0.9231925 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 - TRUE FALSE -16 TRUE 0.3665430 0.8164952 1.22874102 0.7100317 0.8706304 N 0.6100158 0.6927811 25.965 0.586246245 0.51652960 0.550994773 6.021931e-01 TRUE 0.5 6.021931e-01 TRUE 0.4795992663 0.6927811 0.39409835 0.4897882 391038 44554 3014920 3014921 1 100 Same - - 0.0000000 2.70227843 0 -1.746266e+00 499 1.843115 2.701137 0.9231925 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 1.934958 2.887618 0.9615949 524 Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] G ribokinase G TRUE FALSE -17 TRUE 0.3665430 0.2229467 1.17141777 0.7100317 0.8706304 Y 2.3518872 0.8514662 32.920 0.455939461 0.80981514 0.420559112 7.811036e-01 TRUE 0.5 7.811036e-01 TRUE 0.6332388965 0.8514662 0.67323156 0.7093317 391038 44554 3014922 3014923 1 186 Same + + 0.0000000 0.00000000 0 0.000000e+00 499 2.121893 3.111965 0.9955824 1609 Transcriptional regulators [Transcription] K transcriptional regulator, LacI family 1.952662 2.788464 0.9157431 826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones] O peptidase U32 - FALSE FALSE -17 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 N 0.6100158 0.5974727 41.040 0.248479607 0.26549406 0.222610884 1.067532e-01 FALSE 0.5 1.067532e-01 FALSE 0.0812350154 0.5974727 0.21099364 0.3872086 391038 44554 3014923 3014924 1 117 Same + + 0.0000000 0.00000000 0 -2.942395e-01 499 1.952662 2.788464 0.9157431 826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones] O peptidase U32 2.108573 3.071343 0.9800616 3899 Predicted ATPase [General function prediction only] R adenylate/guanylate cyclase FALSE FALSE -16 TRUE 0.3665430 0.2360208 0.42558877 0.7100317 0.8706304 U 0.5172769 0.5885739 34.900 0.411500692 0.23790531 0.377178086 1.791726e-01 FALSE 0.5 1.791726e-01 FALSE 0.1434652165 0.5885739 0.19324873 0.3784968 391038 44554 3014924 3014925 1 136 Same + + 0.0000000 0.00000000 0 0.000000e+00 499 2.108573 3.071343 0.9800616 3899 Predicted ATPase [General function prediction only] R adenylate/guanylate cyclase 2.727137 3.978094 1.1305764 2916 DNA-binding protein H-NS [General function prediction only] R Histone-like nucleoid-structuring protein H-NS FALSE FALSE -15 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 U 0.5172769 0.5858723 37.065 0.361957354 0.22936366 0.329453717 1.444530e-01 FALSE 0.5 1.444530e-01 FALSE 0.1159869548 0.5858723 0.18783870 0.3758784 391038 44554 3014925 3014926 1 111 Same + + 0.0000000 0.00000000 0 0.000000e+00 NA 2.727137 3.978094 1.1305764 2916 DNA-binding protein H-NS [General function prediction only] R Histone-like nucleoid-structuring protein H-NS 2.961045 4.411943 1.0720632 - - - conserved hypothetical protein FALSE FALSE -14 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 34.145 0.428528389 0.13879908 0.393735752 1.078245e-01 FALSE 0.5 1.078245e-01 FALSE 0.1029974052 0.5586823 0.13279174 0.3501931 391038 44554 3014929 3014930 1 23 Same - - 0.0000000 3.32157121 0 3.321571e+00 NA 3.338948 4.628772 1.0912653 - - - putative lipoprotein 2.681338 3.924403 1.0821018 - - - putative lipoprotein TRUE FALSE -14 TRUE 0.3665430 0.8369607 1.23934470 0.7100317 0.4836215 U 0.5172769 0.6588118 18.590 0.744260759 0.43538733 0.715948973 6.917534e-01 TRUE 0.5 6.917534e-01 TRUE 0.5893347828 0.6588118 0.33025830 0.4511556 391038 44554 3014930 3014931 1 332 Same - - 0.0000000 -5.09641388 0 -5.096414e+00 NA 2.681338 3.924403 1.0821018 - - - putative lipoprotein 3.263828 4.544947 1.1138251 5455 Predicted integral membrane protein [Function unknown] S integral membrane protein-like TRUE FALSE -15 TRUE 0.3665430 0.2174342 0.12041536 0.7100317 0.4836215 U 0.5172769 0.5175655 47.645 0.035483975 0.01831895 0.030878693 6.860488e-04 FALSE 0.5 6.860488e-04 FALSE 0.0018282197 0.5175655 0.04742418 0.3135196 391038 44554 3014932 3014933 1 89 Same + + 3.6635616 0.00000000 0 3.663562e+00 NA 2.271018 3.358247 0.9667407 - - - hypothetical protein 2.385677 3.499126 1.0343953 - - - hypothetical protein FALSE FALSE -15 TRUE 1.2627002 0.8632530 0.42558877 0.7100317 0.4836215 U 0.5172769 0.7016459 31.255 0.493972930 0.53641210 0.458126416 5.304117e-01 TRUE 0.5 5.304117e-01 TRUE 0.4046873203 0.7016459 0.41050876 0.5002853 391038 44554 3014934 3014935 1 283 Same - - 0.0000000 0.00000000 0 -5.264373e-02 499 2.691942 3.886262 1.0721506 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET extracellular solute-binding protein, family 3 2.441679 3.506813 1.0505745 664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] T cyclic nucleotide-binding protein T TRUE FALSE -15 TRUE 0.3665430 0.2415858 0.42558877 0.7100317 0.8706304 Y 2.3518872 0.7870768 46.250 0.061872809 0.70506660 0.054034527 1.361947e-01 FALSE 0.5 1.361947e-01 FALSE 0.0784900623 0.7870768 0.56359451 0.6114444 391038 44554 3014935 3014936 1 -159 Same - - 11.1854209 0.00000000 0 3.968707e+01 499 2.441679 3.506813 1.0505745 664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] T cyclic nucleotide-binding protein 2.036300 2.946781 0.9465321 492 Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] O response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase - TRUE FALSE -16 TRUE 2.4312178 2.2467673 0.42558877 0.7100317 0.8706304 N 0.6100158 0.8514086 0.540 0.549669117 0.80972847 0.513885369 8.385638e-01 TRUE 0.5 8.385638e-01 TRUE 0.7153954817 0.8514086 0.67313553 0.7092378 391038 44554 3014936 3014937 1 159 Same - - 0.0000000 0.00000000 0 0.000000e+00 499 2.036300 2.946781 0.9465321 492 Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] O response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2.296261 3.332141 1.0353774 664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] T cyclic nucleotide-binding protein - TRUE FALSE -17 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 N 0.6100158 0.5974727 39.095 0.322243872 0.26549406 0.291676205 1.466546e-01 FALSE 0.5 1.466546e-01 FALSE 0.1128028797 0.5974727 0.21099364 0.3872086 391038 44554 3014937 3014938 1 429 Same - - 0.0000000 0.00000000 0 0.000000e+00 499 2.296261 3.332141 1.0353774 664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] T cyclic nucleotide-binding protein 2.762572 4.035941 1.1204891 - - - conserved hypothetical protein TRUE FALSE -18 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 U 0.5172769 0.5858723 49.460 0.015389950 0.22936366 0.013356455 4.630548e-03 FALSE 0.5 4.630548e-03 FALSE 0.0036020403 0.5858723 0.18783870 0.3758784 391038 44554 3014938 3014939 1 77 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.762572 4.035941 1.1204891 - - - conserved hypothetical protein 2.178543 3.129348 1.1698671 - - - OsmC-like protein TRUE FALSE -19 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 29.420 0.532191799 0.13879908 0.496291929 1.549419e-01 FALSE 0.5 1.549419e-01 FALSE 0.1483562819 0.5586823 0.13279174 0.3501931 391038 44554 3014939 3014940 1 259 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.178543 3.129348 1.1698671 - - - OsmC-like protein 1.652097 2.372699 0.8571653 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] QR short-chain dehydrogenase/reductase SDR TRUE FALSE -20 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 45.350 0.085137198 0.13879908 0.074586014 1.477679e-02 FALSE 0.5 1.477679e-02 FALSE 0.0140496682 0.5586823 0.13279174 0.3501931 391038 44554 3014940 3014941 1 386 Same - - 0.0000000 -0.73826762 0 -7.491967e-01 499 1.652097 2.372699 0.8571653 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] QR short-chain dehydrogenase/reductase SDR 1.986588 2.886572 0.9515181 412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Q conserved hypothetical protein Q TRUE FALSE -21 TRUE 0.3665430 0.2309405 0.19063967 0.7100317 0.8706304 Y 2.3518872 0.7633218 48.795 0.021216471 0.66195962 0.018427517 4.071883e-02 FALSE 0.5 4.071883e-02 FALSE 0.0231175986 0.7633218 0.52192608 0.5785861 391038 44554 3014941 3014942 1 3 Same - - 3.2396392 4.68568562 0 3.000274e+01 NA 1.986588 2.886572 0.9515181 412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Q conserved hypothetical protein 2.782170 4.062100 1.1080405 - - - conserved hypothetical protein TRUE FALSE -22 TRUE 1.1544137 2.0773098 1.36297212 0.7100317 0.4836215 U 0.5172769 0.7667506 12.135 0.853282157 0.66834662 0.834353455 9.213836e-01 TRUE 0.5 9.213836e-01 TRUE 0.8667617460 0.7667506 0.52798230 0.5832299 391038 44554 3014942 3014943 1 137 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.782170 4.062100 1.1080405 - - - conserved hypothetical protein 2.917107 4.245660 1.1256085 1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit [Lipid metabolism] I methylmalonyl-CoA mutase, large subunit TRUE FALSE -23 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 37.155 0.360624910 0.13879908 0.328179383 8.332890e-02 FALSE 0.5 8.332890e-02 FALSE 0.0795007282 0.5586823 0.13279174 0.3501931 391038 44554 3014943 3014944 1 -3 Same - - 0.0000000 -0.53013060 0 -5.301306e-01 NA 2.917107 4.245660 1.1256085 1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit [Lipid metabolism] I methylmalonyl-CoA mutase, large subunit 2.286541 3.242199 0.9942122 - - - hypothetical protein TRUE FALSE -24 TRUE 0.3665430 0.2332907 0.19627904 0.7100317 0.4836215 U 0.5172769 0.5282165 7.290 0.846003258 0.02624685 0.826326610 1.289786e-01 FALSE 0.5 1.289786e-01 FALSE 0.2918643913 0.5282165 0.06978880 0.3227810 391038 44554 3014944 3014945 1 3 Same - - 2.3136349 3.06262624 0 5.376261e+00 NA 2.286541 3.242199 0.9942122 - - - hypothetical protein 1.854939 2.617655 0.8721850 2072 Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] P FAD dependent oxidoreductase TRUE FALSE -25 TRUE 0.8841342 1.0175657 1.21693008 0.7100317 0.4836215 U 0.5172769 0.7341799 12.135 0.853282157 0.60526712 0.834353455 8.991703e-01 TRUE 0.5 8.991703e-01 TRUE 0.8375250132 0.7341799 0.46987356 0.5403938 391038 44554 3014945 3014946 1 67 Same - - 13.3237029 3.75466962 0 1.839768e+01 NA 1.854939 2.617655 0.8721850 2072 Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] P FAD dependent oxidoreductase 1.990581 2.860830 0.9913970 - - - conserved hypothetical protein TRUE FALSE -26 TRUE 2.6184087 1.8122310 1.28706639 0.7100317 0.4836215 U 0.5172769 0.9071770 27.615 0.559060182 0.88844694 0.523375599 9.098925e-01 TRUE 0.5 9.098925e-01 TRUE 0.8044218569 0.9071770 0.76437467 0.8062206 391038 44554 3014946 3014947 1 24 Same - - 6.0513045 2.96164746 0 4.931649e+00 NA 1.990581 2.860830 0.9913970 - - - conserved hypothetical protein 2.128254 3.095121 0.9863913 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M glycosyl transferase, group 1 TRUE FALSE -27 TRUE 1.7938354 0.9832843 1.20393730 0.7100317 0.4836215 U 0.5172769 0.8453767 18.850 0.738165069 0.80059191 0.709441906 9.188222e-01 TRUE 0.5 9.188222e-01 TRUE 0.8472809165 0.8453767 0.66306409 0.6994718 391038 44554 3014947 3014948 1 -3 Same - - 2.3136349 2.96164746 0 4.610306e+00 499 2.128254 3.095121 0.9863913 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M glycosyl transferase, group 1 2.310408 3.400098 0.9975257 2144 Selenophosphate synthetase-related proteins [General function prediction only] R AIR synthase related protein-like TRUE FALSE -28 TRUE 0.8841342 0.9538815 1.20393730 0.7100317 0.8706304 U 0.5172769 0.7551692 7.290 0.846003258 0.64654033 0.826326610 9.094928e-01 TRUE 0.5 9.094928e-01 TRUE 0.8498557075 0.7551692 0.50746895 0.5676741 391038 44554 3014948 3014949 1 -3 Same - - 5.8971539 3.75466962 0 1.127779e+01 499 2.310408 3.400098 0.9975257 2144 Selenophosphate synthetase-related proteins [General function prediction only] R AIR synthase related protein-like 2.404578 3.457395 0.9769134 - - - GCN5-related N-acetyltransferase TRUE FALSE -29 TRUE 1.7744206 1.5270786 1.28706639 0.7100317 0.8706304 U 0.5172769 0.8562751 7.290 0.846003258 0.81700607 0.826326610 9.608262e-01 TRUE 0.5 9.608262e-01 TRUE 0.9215091244 0.8562751 0.68123182 0.7172141 391038 44554 3014949 3014950 1 3 Same - - 5.8971539 3.75466962 0 1.127779e+01 499 2.404578 3.457395 0.9769134 - - - GCN5-related N-acetyltransferase 1.898298 2.744520 0.8998494 2516 Biotin synthase-related enzyme [General function prediction only] R Radical SAM TRUE FALSE -30 TRUE 1.7744206 1.5270786 1.28706639 0.7100317 0.8706304 U 0.5172769 0.8562751 12.135 0.853282157 0.81700607 0.834353455 9.629157e-01 TRUE 0.5 9.629157e-01 TRUE 0.9255332609 0.8562751 0.68123182 0.7172141 391038 44554 3014950 3014951 1 -31 Same - - 12.8441299 3.75466962 0 3.343304e+01 499 1.898298 2.744520 0.8998494 2516 Biotin synthase-related enzyme [General function prediction only] R Radical SAM 1.826511 2.632311 0.8822485 388 Predicted amidohydrolase [General function prediction only] R Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TRUE FALSE -31 TRUE 2.5805768 2.1363301 1.28706639 0.7100317 0.8706304 U 0.5172769 0.9110800 2.185 0.669444175 0.89359530 0.636890685 9.444687e-01 TRUE 0.5 9.444687e-01 TRUE 0.8718680958 0.9110800 0.77063597 0.8134959 391038 44554 3014951 3014952 1 18 Same - - 12.8441299 3.75466962 0 3.343304e+01 NA 1.826511 2.632311 0.8822485 388 Predicted amidohydrolase [General function prediction only] R Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1.868998 2.615757 0.9027186 - - - conserved hypothetical protein TRUE FALSE -32 TRUE 2.5805768 2.1363301 1.28706639 0.7100317 0.4836215 U 0.5172769 0.9016579 17.165 0.776663436 0.88109070 0.750737423 9.626417e-01 TRUE 0.5 9.626417e-01 TRUE 0.9148586052 0.9016579 0.75549344 0.7960482 391038 44554 3014953 3014954 1 291 Same + + 0.0000000 0.00000000 0 0.000000e+00 499 2.437249 3.517750 1.0328543 1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism] KE transcriptional regulator, GntR family 1.775163 2.508502 0.8434211 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET extracellular solute-binding protein, family 3 E FALSE FALSE -32 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 Y 2.3518872 0.7853051 46.475 0.056846156 0.70194167 0.049610993 1.243006e-01 FALSE 0.5 1.243006e-01 FALSE 0.0713822220 0.7853051 0.56051008 0.6089375 391038 44554 3014954 3014955 1 22 Same + + 1.9661129 0.16466460 0 5.351451e+00 499 1.775163 2.508502 0.8434211 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET extracellular solute-binding protein, family 3 2.009227 2.941555 0.9804800 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E polar amino acid ABC transporter, inner membrane subunit E FALSE FALSE -31 TRUE 0.6797562 1.0157619 0.71730514 0.7100317 0.8706304 Y 2.3518872 0.8362146 18.305 0.751005236 0.78646185 0.723162374 9.174133e-01 TRUE 0.5 9.174133e-01 TRUE 0.8472088345 0.8362146 0.64768856 0.6848868 391038 44554 3014955 3014956 1 -3 Same + + 1.9661129 0.16466460 0 5.351451e+00 70 2.009227 2.941555 0.9804800 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E polar amino acid ABC transporter, inner membrane subunit 1.923180 2.804860 0.9404937 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E polar amino acid ABC transporter, inner membrane subunit E FALSE FALSE -30 TRUE 0.6797562 1.0157619 0.71730514 0.7100317 1.9489355 Y 2.3518872 0.8743425 7.290 0.846003258 0.84331595 0.826326610 9.672863e-01 TRUE 0.5 9.672863e-01 TRUE 0.9311276711 0.8743425 0.71106255 0.7476100 391038 44554 3014956 3014957 1 -3 Same + + 1.9661129 0.16466460 0 5.277343e+00 499 1.923180 2.804860 0.9404937 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E polar amino acid ABC transporter, inner membrane subunit 1.768399 2.572981 0.9119639 1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] E ABC transporter related E FALSE FALSE -29 TRUE 0.6797562 1.0074909 0.71730514 0.7100317 0.8706304 Y 2.3518872 0.8363380 7.290 0.846003258 0.78665414 0.826326610 9.529551e-01 TRUE 0.5 9.529551e-01 TRUE 0.9099804456 0.8363380 0.64789619 0.6850812 391038 44554 3014958 3014959 1 75 Same - - 0.0000000 -1.79011796 0 -1.790118e+00 NA 1.909329 2.730596 0.9130602 - - - Phytanoyl-CoA dioxygenase 1.939147 2.859663 0.9591520 154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] J Amidase TRUE FALSE -29 TRUE 0.3665430 0.2227420 0.15606070 0.7100317 0.4836215 U 0.5172769 0.5226308 29.095 0.538272981 0.01831895 0.502403447 2.129124e-02 FALSE 0.5 2.129124e-02 FALSE 0.0670654793 0.5226308 0.05808227 0.3179039 391038 44554 3014959 3014960 1 -45 Same - - 2.1400662 -1.57472689 0 4.700291e-01 NA 1.939147 2.859663 0.9591520 154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] J Amidase 1.681615 2.425240 0.9280597 - - - conserved hypothetical protein TRUE FALSE -30 TRUE 0.7799997 0.5670233 0.16644325 0.7100317 0.4836215 U 0.5172769 0.5917686 1.845 0.647607950 0.24790527 0.614143492 3.772412e-01 FALSE 0.5 3.772412e-01 FALSE 0.3143086895 0.5917686 0.19963245 0.3816089 391038 44554 3014960 3014961 1 -3 Same - - 0.0000000 0.16466460 0 1.646646e-01 NA 1.681615 2.425240 0.9280597 - - - conserved hypothetical protein 1.828815 2.706039 0.9218005 - - - putative alcohol dehydrogenase TRUE FALSE -31 TRUE 0.3665430 0.4771405 0.71730514 0.7100317 0.4836215 U 0.5172769 0.5966471 7.290 0.846003258 0.26296915 0.826326610 6.621743e-01 TRUE 0.5 6.621743e-01 TRUE 0.5926079476 0.5966471 0.20935218 0.3863947 391038 44554 3014961 3014962 1 3 Same - - 0.0000000 0.16466460 0 1.948259e-02 NA 1.828815 2.706039 0.9218005 - - - putative alcohol dehydrogenase 2.003487 2.889908 0.9433852 3427 Uncharacterized conserved protein [Function unknown] S carbon monoxide dehydrogenase subunit G TRUE FALSE -32 TRUE 0.3665430 0.4688050 0.71730514 0.7100317 0.4836215 U 0.5172769 0.5968656 12.135 0.853282157 0.26363801 0.834353455 6.755584e-01 TRUE 0.5 6.755584e-01 TRUE 0.6069160186 0.5968656 0.20978666 0.3866100 391038 44554 3014962 3014963 1 26 Same - - 0.0000000 0.16466460 0 1.646646e-01 NA 2.003487 2.889908 0.9433852 3427 Uncharacterized conserved protein [Function unknown] S carbon monoxide dehydrogenase subunit G 1.531660 2.205046 0.8419447 2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion] C (2Fe-2S)-binding protein TRUE FALSE -33 TRUE 0.3665430 0.4771405 0.71730514 0.7100317 0.4836215 U 0.5172769 0.5966471 19.395 0.725954311 0.26296915 0.696442487 4.859035e-01 FALSE 0.5 4.859035e-01 FALSE 0.4122570883 0.5966471 0.20935218 0.3863947 391038 44554 3014963 3014964 1 -3 Same - - 0.0000000 0.16466460 0 1.646646e-01 12 1.531660 2.205046 0.8419447 2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion] C (2Fe-2S)-binding protein 1.814884 2.619524 0.8833171 1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion] C molybdopterin dehydrogenase, FAD-binding C TRUE FALSE -34 TRUE 0.3665430 0.4771405 0.71730514 0.7100317 2.9504171 Y 2.3518872 0.8859137 7.290 0.846003258 0.85960231 0.826326610 9.711279e-01 TRUE 0.5 9.711279e-01 TRUE 0.9369156529 0.8859137 0.72998152 0.7677515 391038 44554 3014964 3014965 1 -3 Same - - 3.7471484 4.15005131 0 7.897200e+00 12 1.814884 2.619524 0.8833171 1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion] C molybdopterin dehydrogenase, FAD-binding 1.690595 2.430123 0.8271249 1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion] C aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding C TRUE FALSE -35 TRUE 1.2931483 1.2315695 1.31851226 0.7100317 2.9504171 Y 2.3518872 0.9534260 7.290 0.846003258 0.94674331 0.826326610 9.898642e-01 TRUE 0.5 9.898642e-01 TRUE 0.9659001364 0.9534260 0.83755879 0.8970635 391038 44554 3014965 3014966 1 21 Same - - 3.7471484 0.16466460 0 3.736460e+00 499 1.690595 2.430123 0.8271249 1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion] C aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 1.760761 2.499380 0.8692815 3964 Predicted amidohydrolase [General function prediction only] R amidohydrolase TRUE FALSE -36 TRUE 1.2931483 0.8734338 0.71730514 0.7100317 0.8706304 U 0.5172769 0.7611420 18.055 0.756894447 0.65786926 0.729472904 8.568710e-01 TRUE 0.5 8.568710e-01 TRUE 0.7699508533 0.7611420 0.51806854 0.5756507 391038 44554 3014967 3014968 1 82 Same + + 0.0000000 -1.54922473 0 -1.669369e+00 339 2.055652 2.980204 0.9804562 1846 Transcriptional regulators [Transcription] K transcriptional regulator, MarR family 1.960895 2.816051 0.9754727 1802 Transcriptional regulators [Transcription] K transcriptional regulator, GntR family K FALSE FALSE -36 TRUE 0.3665430 0.2239971 0.16755505 0.7100317 1.3380450 Y 2.3518872 0.7845554 30.110 0.518151004 0.70061498 0.482221951 7.156253e-01 TRUE 0.5 7.156253e-01 TRUE 0.5770235855 0.7845554 0.55920366 0.6078793 391038 44554 3014968 3014969 1 136 Same + + 0.0000000 -4.59829947 0 -5.155774e+00 499 1.960895 2.816051 0.9754727 1802 Transcriptional regulators [Transcription] K transcriptional regulator, GntR family 1.771156 2.549530 0.8821634 405 Gamma-glutamyltransferase [Amino acid transport and metabolism] E gamma-glutamyltranspeptidase - FALSE FALSE -35 TRUE 0.3665430 0.2174093 0.12392145 0.7100317 0.8706304 N 0.6100158 0.5576121 37.065 0.361957354 0.13505364 0.329453717 8.137019e-02 FALSE 0.5 8.137019e-02 FALSE 0.0785277011 0.5576121 0.13060245 0.3492062 391038 44554 3014969 3014970 1 -346 Same + + 0.0000000 0.00000000 0 0.000000e+00 499 1.771156 2.549530 0.8821634 405 Gamma-glutamyltransferase [Amino acid transport and metabolism] E gamma-glutamyltranspeptidase 2.087610 2.992200 0.9857117 2223 Nitrate/nitrite transporter [Inorganic ion transport and metabolism] P major facilitator superfamily MFS_1 - FALSE FALSE -34 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.8706304 N 0.6100158 0.5974727 0.190 0.519913909 0.26549406 0.483985398 2.813231e-01 FALSE 0.5 2.813231e-01 FALSE 0.2245668008 0.5974727 0.21099364 0.3872086 391038 44554 3014971 3014972 1 15 Same - - 3.4489288 -0.06961500 0 -2.733003e+00 499 1.787871 2.535083 0.8523112 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] R alpha/beta hydrolase fold 1.694794 2.493870 0.8488522 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 TRUE FALSE -34 TRUE 1.2021804 0.2196698 0.20868928 0.7100317 0.8706304 U 0.5172769 0.7034262 16.325 0.791920695 0.54034475 0.767235013 8.173167e-01 TRUE 0.5 8.173167e-01 TRUE 0.7287385283 0.7034262 0.41379226 0.5024151 391038 44554 3014972 3014973 1 59 Same - - 1.8803129 -4.82489426 0 2.019285e+01 499 1.694794 2.493870 0.8488522 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 1.549264 2.241263 0.7769311 119 Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism] E pyruvate carboxyltransferase - TRUE FALSE -35 TRUE 0.6650180 1.8554106 0.12284082 0.7100317 0.8706304 N 0.6100158 0.5689937 26.175 0.581876157 0.17416324 0.546540351 2.268956e-01 FALSE 0.5 2.268956e-01 FALSE 0.2018699542 0.5689937 0.15379673 0.3597936 391038 44554 3014973 3014974 1 19 Same - - 17.4956209 10.25210293 0 6.283632e+01 499 1.549264 2.241263 0.7769311 119 Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism] E pyruvate carboxyltransferase 1.547947 2.248255 0.7764528 4569 Acetaldehyde dehydrogenase (acetylating) [Secondary metabolites biosynthesis, transport, and catabolism] Q Semialdehyde dehydrogenase, NAD - binding - TRUE FALSE -36 TRUE 2.8929035 2.4807653 1.97259765 0.7100317 0.8706304 N 0.6100158 0.9514127 17.460 0.770411912 0.94432349 0.743999397 9.827331e-01 TRUE 0.5 9.827331e-01 TRUE 0.9441654099 0.9514127 0.83441818 0.8928873 391038 44554 3014974 3014975 1 18 Same - - 12.0973732 2.03971144 0 7.927003e+01 499 1.547947 2.248255 0.7764528 4569 Acetaldehyde dehydrogenase (acetylating) [Secondary metabolites biosynthesis, transport, and catabolism] Q Semialdehyde dehydrogenase, NAD - binding 1.549073 2.250400 0.8025249 3971 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism] Q Hydratase/decarboxylase Q TRUE FALSE -37 TRUE 2.5153624 2.6106107 1.09538785 0.7100317 0.8706304 Y 2.3518872 0.9553701 17.165 0.776663436 0.94907010 0.750737423 9.848032e-01 TRUE 0.5 9.848032e-01 TRUE 0.9482862141 0.9553701 0.84058735 0.9011160 391038 44554 3014975 3014976 1 4 Same - - 3.0296975 1.14888591 0 2.517056e+01 51 1.549073 2.250400 0.8025249 3971 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism] Q Hydratase/decarboxylase 1.789541 2.623677 0.8719291 - - - Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B TRUE FALSE -38 TRUE 1.0869660 1.9718058 0.96169601 0.7100317 2.2084098 U 0.5172769 0.8039002 12.620 0.849881307 0.73405427 0.830600952 9.398547e-01 TRUE 0.5 9.398547e-01 TRUE 0.8917564424 0.8039002 0.59270010 0.6357222 391038 44554 3014976 3014977 1 2 Same - - 4.9713553 1.14888591 0 4.808364e+01 51 1.789541 2.623677 0.8719291 - - - Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B 1.572257 2.245455 0.7680989 654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] HC monooxygenase, FAD-binding TRUE FALSE -39 TRUE 1.5797355 2.3535181 0.96169601 0.7100317 2.2084098 U 0.5172769 0.8508476 11.650 0.856276179 0.80888423 0.837660259 9.618553e-01 TRUE 0.5 9.618553e-01 TRUE 0.9243416747 0.8508476 0.67220058 0.7083240 391038 44554 3014979 3014980 1 12 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 2.368945 3.365937 1.0438325 - - - conserved Hypothetical protein Y25C1A.3 2.345608 3.394430 1.0010426 3900 Predicted periplasmic protein [Function unknown] S periplasmic protein-like TRUE FALSE -40 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 15.300 0.810682004 0.13879908 0.787625188 4.083350e-01 FALSE 0.5 4.083350e-01 FALSE 0.3960264535 0.5586823 0.13279174 0.3501931 391038 44554 3014980 3014981 1 -3 Same - - 3.6635616 0.00000000 0 3.663562e+00 NA 2.345608 3.394430 1.0010426 3900 Predicted periplasmic protein [Function unknown] S periplasmic protein-like 1.883550 2.627142 0.9452233 - - - hypothetical protein TRUE FALSE -41 TRUE 1.2627002 0.8632530 0.42558877 0.7100317 0.4836215 U 0.5172769 0.7016459 7.290 0.846003258 0.53641210 0.826326610 8.640682e-01 TRUE 0.5 8.640682e-01 TRUE 0.7927741564 0.7016459 0.41050876 0.5002853 391038 44554 3014981 3014982 1 861 Same - - 0.0000000 0.00000000 0 0.000000e+00 NA 1.883550 2.627142 0.9452233 - - - hypothetical protein 2.089755 3.036899 0.9446125 642 Signal transduction histidine kinase [Signal transduction mechanisms] T response regulator receiver sensor signal transduction histidine kinase TRUE FALSE -42 TRUE 0.3665430 0.3383488 0.42558877 0.7100317 0.4836215 U 0.5172769 0.5586823 51.970 0.003939938 0.13879908 0.003414103 6.371024e-04 FALSE 0.5 6.371024e-04 FALSE 0.0006053250 0.5586823 0.13279174 0.3501931 391038 44554 3014982 3014983 1 3 Same - - 0.0000000 0.66788568 0 6.678857e-01 64 2.089755 3.036899 0.9446125 642 Signal transduction histidine kinase [Signal transduction mechanisms] T response regulator receiver sensor signal transduction histidine kinase 1.797283 2.611451 0.8726876 642 Signal transduction histidine kinase [Signal transduction mechanisms] T multi-sensor hybrid histidine kinase T TRUE FALSE -43 TRUE 0.3665430 0.5932247 0.89375253 0.7100317 2.0441717 Y 2.3518872 0.8676289 12.135 0.853282157 0.83366744 0.834353455 9.668315e-01 TRUE 0.5 9.668315e-01 TRUE 0.9313727048 0.8676289 0.70001939 0.7361684 391038 44554 3014983 3014984 1 13 Same - - 0.0000000 0.66788568 0 6.678857e-01 94 1.797283 2.611451 0.8726876 642 Signal transduction histidine kinase [Signal transduction mechanisms] T multi-sensor hybrid histidine kinase 1.758934 2.553103 0.8682326 3899 Predicted ATPase [General function prediction only] R serine/threonine protein kinase TRUE FALSE -44 TRUE 0.3665430 0.5932247 0.89375253 0.7100317 1.8330368 U 0.5172769 0.7046645 15.750 0.801913534 0.54306832 0.778081147 8.279259e-01 TRUE 0.5 8.279259e-01 TRUE 0.7425729077 0.7046645 0.41607363 0.5039008 391038 44554 3014984 3014985 1 28 Same - - 0.0000000 0.66788568 0 3.355064e-01 499 1.758934 2.553103 0.8682326 3899 Predicted ATPase [General function prediction only] R serine/threonine protein kinase 1.595210 2.283315 0.8376461 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family TRUE FALSE -45 TRUE 0.3665430 0.5185870 0.89375253 0.7100317 0.8706304 U 0.5172769 0.6459835 19.890 0.715807722 0.40252435 0.685676325 6.292038e-01 TRUE 0.5 6.292038e-01 TRUE 0.5258973008 0.6459835 0.30574698 0.4371895 391038 44554 3014989 3014990 1 -3 Same - - 17.4736951 8.95871277 0 7.397819e+01 2 2.068236 3.017283 0.9585119 3276 Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] J selenocysteine-specific translation elongation factor 2.340247 3.457452 1.0702798 1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism] E L-seryl-tRNA selenium transferase - TRUE FALSE -46 TRUE 2.8906108 2.5664415 1.83150435 0.7100317 3.7876445 N 0.6100158 0.9763021 7.290 0.846003258 0.97353676 0.826326610 9.950764e-01 TRUE 0.5 9.950764e-01 TRUE 0.9741932660 0.9763021 0.87295942 0.9460573 391038 44554 3014990 3014991 1 -372 Same - - 4.9161645 8.66898361 0 5.992202e+01 NA 2.340247 3.457452 1.0702798 1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism] E L-seryl-tRNA selenium transferase 1.978794 2.866126 0.9383747 3058 Uncharacterized protein involved in formate dehydrogenase formation [Posttranslational modification, protein turnover, chaperones] O formate dehydrogenase accessory protein FdhE - TRUE FALSE -47 TRUE 1.5764254 2.4472414 1.78575592 0.7100317 0.4836215 N 0.6100158 0.8536994 0.160 0.517304982 0.81316459 0.481375986 8.234579e-01 TRUE 0.5 8.234579e-01 TRUE 0.6919044015 0.8536994 0.67694995 0.7129816 391038 44554 3014991 3014992 1 95 Same - - 16.6420485 7.40018714 0 1.621653e+02 NA 1.978794 2.866126 0.9383747 3058 Uncharacterized protein involved in formate dehydrogenase formation [Posttranslational modification, protein turnover, chaperones] O formate dehydrogenase accessory protein FdhE 1.889681 2.673815 0.8730278 2864 Cytochrome b subunit of formate dehydrogenase [Energy production and conversion] C formate dehydrogenase, gamma subunit - TRUE FALSE -48 TRUE 2.8381552 2.9437000 1.63499808 0.7100317 0.4836215 N 0.6100158 0.9291719 32.140 0.474237608 0.91689496 0.438581977 9.086902e-01 TRUE 0.5 9.086902e-01 TRUE 0.7824048749 0.9291719 0.79945268 0.8481329 391038 44554 3014992 3014993 1 -3 Same - - 38.2623374 11.49622407 0 1.484407e+02 3 1.889681 2.673815 0.8730278 2864 Cytochrome b subunit of formate dehydrogenase [Energy production and conversion] C formate dehydrogenase, gamma subunit 1.490175 2.068163 0.7521970 437 Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion] C formate dehydrogenase, beta subunit C TRUE FALSE -49 TRUE 3.6035690 2.8993736 2.06660916 0.7100317 3.6605680 Y 2.3518872 0.9946400 7.290 0.846003258 0.99412492 0.826326610 9.989254e-01 TRUE 0.5 9.989254e-01 TRUE 0.9803840030 0.9946400 0.90096626 0.9874996 391038 44554 3014993 3014994 1 10 Same - - 41.2260649 9.38674663 0 1.470504e+02 3 1.490175 2.068163 0.7521970 437 Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion] C formate dehydrogenase, beta subunit 1.609513 2.223517 0.7742019 - - - formate dehydrogenase, alpha subunit TRUE FALSE -50 TRUE 3.6425866 2.8949613 1.90193382 0.7100317 3.6605680 U 0.5172769 0.9853276 14.360 0.828796842 0.98376550 0.807422131 9.966027e-01 TRUE 0.5 9.966027e-01 TRUE 0.9743051318 0.9853276 0.88678452 0.9662029 391038 44554 3014994 3014995 1 13 Same - - 49.7435224 7.90893248 0 1.522577e+02 12 1.609513 2.223517 0.7742019 - - - formate dehydrogenase, alpha subunit 1.834811 2.576885 0.9008473 - - - Twin-arginine translocation pathway signal TRUE FALSE -51 TRUE 3.7531017 2.9141082 1.67489380 0.7100317 2.9504171 U 0.5172769 0.9811371 15.750 0.801913534 0.97903977 0.778081147 9.947394e-01 TRUE 0.5 9.947394e-01 TRUE 0.9675255456 0.9811371 0.88037551 0.9567899 391038 44554 3014996 3014997 1 395 Same + + 0.0000000 -3.62443889 0 3.577971e-01 499 1.782983 2.680999 0.9168933 1295 Predicted membrane protein [Function unknown] S putative ribonuclease BN 1.775932 2.471726 0.8131602 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M porin, Gram-negative type FALSE FALSE -51 TRUE 0.3665430 0.5397404 0.13340394 0.7100317 0.8706304 U 0.5172769 0.5383996 48.925 0.019953253 0.06528427 0.017327412 1.419969e-03 FALSE 0.5 1.419969e-03 FALSE 0.0020341832 0.5383996 0.09100571 0.3317889 391038 44554 3014998 3014999 1 -151 Same - - 0.0000000 1.28053140 0 1.280531e+00 NA 1.990214 2.857834 0.9331480 3484 Predicted proteasome-type protease [Posttranslational modification, protein turnover, chaperones] O proteasome-type protease-like 1.657550 2.416327 0.8513338 1305 Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism] E transglutaminase-like - TRUE FALSE -51 TRUE 0.3665430 0.6495611 0.98678801 0.7100317 0.4836215 N 0.6100158 0.6407334 0.570 0.552157812 0.38869563 0.516397834 4.394473e-01 FALSE 0.5 4.394473e-01 FALSE 0.3410312776 0.6407334 0.29565088 0.4315677 391038 44554 3014999 3015000 1 14 Same - - 31.6928015 3.75633182 0 2.044554e+02 NA 1.657550 2.416327 0.8513338 1305 Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism] E transglutaminase-like 1.774198 2.555368 0.8959065