Taxon Scaffold Gene1 Gene2 Consecutive Sep Code Strand1 Strand2 GNScore GNWithin GNAll GNMinus GOScore CAI CAI.Alm CBI COG COGanno COGfun Description nCAI nCAI.Alm nCBI nCOG nCOGanno nCOGfun nDescription COGsim forward forwardplus sumBias same bbfGNScore bbfGNMinus bbfGNWithin bbfGNAll bbfGOScore COGsimClass cfCOG pSame groupIndexD pSameD pOpLogistic pOpDistance pOp1 bOp1 pCAI pOp bOp pOp2 pSame pOpLogisticLike pOpLogisticM 395019 46419 3088149 3088150 1 1 Same - - 0.0000000 0.092373320 0 9.237332e-02 NA 3.128146 4.352301 1.0339881 - - - conserved hypothetical protein 3.721170 5.040346 1.0720414 - - - hypothetical protein TRUE FALSE 0 TRUE 0.092348959 -8.755689e-02 0.0049073936 0.447122 0.1714116 U 0.2267807 0.4671532 9.365 0.876338155 0.01428743 0.761055565 0.0931485365 FALSE 0.5 0.0931485365 FALSE 0.1357929607 0.4671532 0.02169197 0.2012397 395019 46419 3088151 3088152 1 16 Same + + 0.0000000 0.092373320 0 9.237332e-02 NA 2.630033 3.542306 1.0562495 - - - putative transposase 2.516454 3.498187 0.9620559 1484 DNA replication protein [DNA replication, recombination, and repair] L IstB domain protein ATP-binding protein FALSE FALSE 0 TRUE 0.092348959 -8.755689e-02 0.0049073936 0.447122 0.1714116 U 0.2267807 0.4671532 13.695 0.843689903 0.01428743 0.708108931 0.0725581786 FALSE 0.5 0.0725581786 FALSE 0.1068871759 0.4671532 0.02169197 0.2012397 395019 46419 3088157 3088158 1 565 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 4.984662 6.837092 1.1441522 - - - AAA ATPase 4.050767 5.656560 1.1080378 - - - hypothetical protein TRUE FALSE 0 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 39.100 0.020529991 0.01428743 0.009332734 0.0003037173 FALSE 0.5 0.0003037173 FALSE 0.0004645359 0.4609152 0.02169197 0.1972381 395019 46419 3088158 3088159 1 7 Same - - 0.0000000 0.092373320 0 9.237332e-02 NA 4.050767 5.656560 1.1080378 - - - hypothetical protein 4.311326 5.779263 1.0384907 - - - conserved hypothetical protein TRUE FALSE -1 TRUE 0.092348959 -8.755689e-02 0.0049073936 0.447122 0.1714116 U 0.2267807 0.4671532 11.165 0.872626477 0.01428743 0.754851666 0.0903309397 FALSE 0.5 0.0903309397 FALSE 0.1318730164 0.4671532 0.02169197 0.2012397 395019 46419 3088159 3088160 1 648 Same - - 0.0000000 -2.427748236 0 -2.427748e+00 NA 4.311326 5.779263 1.0384907 - - - conserved hypothetical protein 4.565162 6.296853 1.1187297 - - - hypothetical protein TRUE FALSE -2 TRUE 0.092348959 3.506214e-02 0.0057570124 0.447122 0.1714116 U 0.2267807 0.4681780 39.420 0.016936257 0.01428743 0.007683681 0.0002496498 FALSE 0.5 0.0002496498 FALSE 0.0003818505 0.4681780 0.02169197 0.2019022 395019 46419 3088161 3088162 1 952 Same + + 0.0000000 -2.427748236 0 9.237332e-02 NA 4.132252 5.427738 0.9871065 - - - conserved hypothetical protein 5.231874 7.197902 1.1259465 - - - hypothetical protein TRUE TRUE -2 TRUE 0.092348959 -8.755689e-02 0.0057570124 0.447122 0.1714116 U 0.2267807 0.4672792 39.910 0.012484690 0.01428743 0.005650106 0.0001832138 FALSE 0.5 0.0001832138 FALSE 0.0002802436 0.4672792 0.02169197 0.2013211 395019 46419 3088162 3088163 1 250 Same + + 0.0000000 0.092373320 0 9.237332e-02 NA 5.231874 7.197902 1.1259465 - - - hypothetical protein 4.724902 6.510540 1.1557060 1204 Superfamily II helicase [General function prediction only] R DEAD/DEAH box helicase domain protein TRUE TRUE -1 TRUE 0.092348959 -8.755689e-02 0.0049073936 0.447122 0.1714116 U 0.2267807 0.4671532 35.165 0.134924675 0.01428743 0.065508303 0.0022555925 FALSE 0.5 0.0022555925 FALSE 0.0034463675 0.4671532 0.02169197 0.2012397 395019 46419 3088165 3088166 1 -1185 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.579591 3.526110 0.9854616 111 Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] E D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 3.887477 5.213735 1.1163223 3386 Gluconolactonase [Carbohydrate transport and metabolism] G SMP-30/Gluconolaconase/LRE domain protein - TRUE TRUE 0 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 N 0.4361812 0.4848941 0.555 0.076155326 0.01428743 0.035726066 0.0011934016 FALSE 0.5 0.0011934016 FALSE 0.0018244489 0.4848941 0.02169197 0.2129173 395019 46419 3088166 3088167 1 -192 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 3.887477 5.213735 1.1163223 3386 Gluconolactonase [Carbohydrate transport and metabolism] G SMP-30/Gluconolaconase/LRE domain protein 2.473821 3.374518 0.9784389 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 G TRUE TRUE 1 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 Y 2.3800988 0.6969391 1.585 0.183443908 0.53078239 0.091711641 0.2026358079 FALSE 0.5 0.2026358079 FALSE 0.1623010933 0.6969391 0.46306270 0.3979000 395019 46419 3088167 3088168 1 47 Same + + 0.0000000 0.795179332 0 7.951793e-01 397.0 2.473821 3.374518 0.9784389 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 2.236144 3.033743 0.9311107 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M porin, Gram-negative type - TRUE TRUE 2 TRUE 0.092348959 8.726293e-02 0.3946637435 0.447122 1.0362192 N 0.4361812 0.6195314 19.580 0.660432776 0.33733379 0.466424973 0.4975062519 FALSE 0.5 0.4975062519 FALSE 0.4645398225 0.6195314 0.30846558 0.3187705 395019 46419 3088168 3088169 1 11 Same + + 0.0000000 0.795179332 0 7.951793e-01 413.4 2.236144 3.033743 0.9311107 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M porin, Gram-negative type 2.187868 3.006425 0.9320852 3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] R amidohydrolase 2 TRUE TRUE 3 TRUE 0.092348959 8.726293e-02 0.3946637435 0.447122 0.7427214 U 0.2267807 0.5730764 12.085 0.861776343 0.19614629 0.736992812 0.6033794282 TRUE 0.5 0.6033794282 TRUE 0.6156622056 0.5730764 0.20441164 0.2783675 395019 46419 3088169 3088170 1 -3 Same + + 0.0000000 0.795179332 0 7.951793e-01 413.4 2.187868 3.006425 0.9320852 3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] R amidohydrolase 2 2.087124 2.821372 0.8931282 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 TRUE TRUE 4 TRUE 0.092348959 8.726293e-02 0.3946637435 0.447122 0.7427214 U 0.2267807 0.5730764 6.530 0.827310285 0.19614629 0.682862366 0.5389526177 TRUE 0.5 0.5389526177 TRUE 0.5517483594 0.5730764 0.20441164 0.2783675 395019 46419 3088170 3088171 1 263 Same + + 0.0000000 0.000000000 0 0.000000e+00 326.0 2.087124 2.821372 0.8931282 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 3.463068 4.766189 1.0903341 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 G TRUE TRUE 5 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 1.4990229 Y 2.3800988 0.7809505 35.525 0.117935257 0.69733782 0.056686875 0.2355061505 FALSE 0.5 0.2355061505 FALSE 0.1722228817 0.7809505 0.60877721 0.5060563 395019 46419 3088171 3088172 1 3 Same + + 0.0000000 0.000000000 0 0.000000e+00 413.4 3.463068 4.766189 1.0903341 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 2.485727 3.394070 0.9432353 3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] R amidohydrolase 2 TRUE TRUE 6 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.7427214 U 0.2267807 0.5080040 9.960 0.878078019 0.01428743 0.763980564 0.0945219948 FALSE 0.5 0.0945219948 FALSE 0.2382499952 0.5080040 0.04162046 0.2288231 395019 46419 3088177 3088178 1 -3 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 3.501695 4.761204 1.0819800 - - - hypothetical protein 2.364074 3.249782 0.9595330 415 Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] L Deoxyribodipyrimidine photo-lyase FALSE TRUE 6 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 6.530 0.827310285 0.01428743 0.682862366 0.0649306360 FALSE 0.5 0.0649306360 FALSE 0.0960245029 0.4609152 0.02169197 0.1972381 395019 46419 3088178 3088179 1 259 Same - - 0.0000000 0.000000000 0 -6.369858e+00 413.4 2.364074 3.249782 0.9595330 415 Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] L Deoxyribodipyrimidine photo-lyase 2.031327 2.731835 0.8494870 1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] ER Alcohol dehydrogenase GroES domain protein - FALSE TRUE 5 TRUE 0.092348959 8.412064e-02 -0.0371130024 0.447122 0.7427214 N 0.4361812 0.5332863 35.410 0.123218326 0.05565778 0.059411041 0.0082148170 FALSE 0.5 0.0082148170 FALSE 0.0166349305 0.5332863 0.10743863 0.2471920 395019 46419 3088179 3088180 1 88 Same - - 0.0000000 0.000000000 0 -9.162658e-01 413.4 2.031327 2.731835 0.8494870 1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] ER Alcohol dehydrogenase GroES domain protein 1.798854 2.529300 0.8924763 4122 Predicted O-methyltransferase [General function prediction only] R O-methyltransferase, family 3 FALSE TRUE 4 TRUE 0.092348959 -7.452689e-03 -0.0371130024 0.447122 0.7427214 U 0.2267807 0.5086064 24.885 0.535596384 0.01428743 0.341391561 0.0164416743 FALSE 0.5 0.0164416743 FALSE 0.0495282875 0.5086064 0.04322947 0.2292487 395019 46419 3088183 3088184 1 189 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.758431 3.823841 1.0047101 - - - hypothetical protein 3.606202 4.955322 1.1233542 - - - hypothetical protein TRUE TRUE 4 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 32.780 0.271114241 0.01428743 0.143231857 0.0053624296 FALSE 0.5 0.0053624296 FALSE 0.0081799231 0.4609152 0.02169197 0.1972381 395019 46419 3088185 3088186 1 327 Same - - 0.0000000 -4.714573934 0 -4.714574e+00 NA 1.723287 2.378515 0.8944516 - - - hypothetical protein 1.696129 2.341167 0.8089808 1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU RND efflux system, outer membrane lipoprotein, NodT family FALSE TRUE 4 TRUE 0.092348959 6.663697e-02 0.0224583929 0.447122 0.1714116 U 0.2267807 0.4708875 37.010 0.062532661 0.01428743 0.029107529 0.0009659062 FALSE 0.5 0.0009659062 FALSE 0.0014768363 0.4708875 0.02169197 0.2036608 395019 46419 3088186 3088187 1 8 Same - - 9.9972121 1.831332067 0 2.444902e+01 397.0 1.696129 2.341167 0.8089808 1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU RND efflux system, outer membrane lipoprotein, NodT family 1.579497 2.178720 0.7433782 - - - drug resistance transporter, EmrB/QacA subfamily FALSE TRUE 3 TRUE 2.085077106 1.877316e+00 0.6484102694 0.447122 1.0362192 U 0.2267807 0.8441019 11.370 0.870353690 0.80071014 0.751076838 0.9642509642 TRUE 0.5 0.9642509642 TRUE 0.9415441007 0.8441019 0.70581804 0.6087553 395019 46419 3088191 3088192 1 229 Same - - 0.0000000 -1.638821985 0 7.773868e-01 NA 1.654447 2.330841 0.7946547 668 Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] M MscS Mechanosensitive ion channel 1.783144 2.492567 0.8496541 - - - luciferase family protein FALSE TRUE 2 TRUE 0.092348959 8.169082e-02 -0.0100784507 0.447122 0.1714116 U 0.2267807 0.4661718 34.415 0.174046690 0.01428743 0.086515678 0.0030450168 FALSE 0.5 0.0030450168 FALSE 0.0046506032 0.4661718 0.02169197 0.2006066 395019 46419 3088193 3088194 1 475 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 3.433701 4.672716 1.0705102 - - - hypothetical protein 1.545966 2.114354 0.7457991 846 NAD-dependent protein deacetylases, SIR2 family [Transcription] K Silent information regulator protein Sir2 TRUE TRUE 2 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 38.590 0.027580272 0.01428743 0.012587139 0.0004109322 FALSE 0.5 0.0004109322 FALSE 0.0006284854 0.4609152 0.02169197 0.1972381 395019 46419 3088194 3088195 1 -357 Same + + 0.0000000 0.097257154 0 -8.103362e-03 NA 1.545966 2.114354 0.7457991 846 NAD-dependent protein deacetylases, SIR2 family [Transcription] K Silent information regulator protein Sir2 2.714718 3.748431 1.0364273 - - - protein of unknown function DUF938 TRUE TRUE 3 TRUE 0.092348959 -4.106185e-02 0.0459175464 0.447122 0.1714116 U 0.2267807 0.4735798 1.240 0.139996830 0.01428743 0.068176581 0.0023539569 FALSE 0.5 0.0023539569 FALSE 0.0035964735 0.4735798 0.02169197 0.2054184 395019 46419 3088195 3088196 1 96 Same + + 0.0000000 0.097257154 0 9.725715e-02 NA 2.714718 3.748431 1.0364273 - - - protein of unknown function DUF938 1.396804 1.902693 0.6761950 362 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] G 6-phosphogluconate dehydrogenase, decarboxylating TRUE TRUE 4 TRUE 0.092348959 -6.522618e-02 0.0459175464 0.447122 0.1714116 U 0.2267807 0.4734024 25.930 0.513937754 0.01428743 0.322138709 0.0150944432 FALSE 0.5 0.0150944432 FALSE 0.0229075039 0.4734024 0.02169197 0.2053023 395019 46419 3088196 3088197 1 200 Same + + 0.0000000 5.004404964 0 5.004405e+00 NA 1.396804 1.902693 0.6761950 362 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] G 6-phosphogluconate dehydrogenase, decarboxylating 2.001511 2.709433 0.9687868 - - - conserved hypothetical protein TRUE TRUE 5 TRUE 0.092348959 7.167389e-01 1.2241112836 0.447122 0.1714116 U 0.2267807 0.6498424 33.295 0.239440306 0.41857353 0.123957442 0.1847663985 FALSE 0.5 0.1847663985 FALSE 0.1569505802 0.6498424 0.37160345 0.3478188 395019 46419 3088201 3088202 1 49 Same + + 0.0000000 5.012541706 0 2.869064e+00 NA 1.473514 2.000962 0.7104120 3038 Cytochrome B561 [Energy production and conversion] C cytochrome B561 2.363179 3.165322 0.9391497 - - - hypothetical protein TRUE TRUE 6 TRUE 0.092348959 3.913667e-01 1.2258424267 0.447122 0.1714116 U 0.2267807 0.6478946 19.850 0.649364972 0.41358148 0.454259027 0.5663734152 TRUE 0.5 0.5663734152 TRUE 0.5184773174 0.6478946 0.36765129 0.3458820 395019 46419 3088202 3088203 1 82 Same + + 1.5515439 5.179997182 0 2.025833e+01 NA 2.363179 3.165322 0.9391497 - - - hypothetical protein 1.640015 2.229249 0.7518150 1629 Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism] P TonB-dependent copper receptor TRUE TRUE 7 TRUE 0.100883806 1.742904e+00 1.2724824274 0.447122 0.1714116 U 0.2267807 0.6641983 24.260 0.544695239 0.45446258 0.349675366 0.4991509103 FALSE 0.5 0.4991509103 FALSE 0.4440008459 0.6641983 0.40030372 0.3624081 395019 46419 3088205 3088206 1 4 Same + + 14.9677267 5.480138188 0 2.517342e+01 413.4 1.813969 2.502649 0.8281300 1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] R Triacylglycerol lipase 1.769094 2.437514 0.8507755 5380 Lipase chaperone [Posttranslational modification, protein turnover, chaperones] O lipase chaperone TRUE TRUE 8 TRUE 2.537392574 1.893262e+00 1.3490449179 0.447122 0.7427214 U 0.2267807 0.9053596 10.330 0.878366564 0.88720372 0.764466705 0.9826990810 TRUE 0.5 0.9826990810 TRUE 0.9647612539 0.9053596 0.79128398 0.7332667 395019 46419 3088208 3088209 1 94 Same + + 2.2454267 5.179997182 0 1.486798e+01 413.4 1.375757 1.884613 0.6608665 3842 ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] E spermidine/putrescine ABC transporter ATPase subunit 1.437346 1.922291 0.6853470 687 Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism] E extracellular solute-binding protein, family 1 E TRUE TRUE 9 TRUE 0.390795800 1.556089e+00 1.2724824274 0.447122 0.7427214 Y 2.3800988 0.8822386 25.705 0.518209219 0.85596891 0.325884856 0.8647217458 TRUE 0.5 0.8647217458 TRUE 0.7729922929 0.8822386 0.75995193 0.6828314 395019 46419 3088209 3088210 1 -130 Same + + 2.5455313 8.520083630 0 1.170056e+01 397.0 1.437346 1.922291 0.6853470 687 Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism] E extracellular solute-binding protein, family 1 1.829294 2.521448 0.8379384 1176 ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism] E binding-protein-dependent transport systems inner membrane component E TRUE TRUE 10 TRUE 0.537084027 1.406818e+00 1.9004878652 0.447122 1.0362192 Y 2.3800988 0.9282905 1.860 0.223189079 0.91664487 0.114365630 0.7595898639 TRUE 0.5 0.7595898639 TRUE 0.5690851494 0.9282905 0.82131720 0.7881372 395019 46419 3088210 3088211 1 32 Same + + 2.0794415 1.641951036 0 9.598254e+00 397.0 1.829294 2.521448 0.8379384 1176 ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism] E binding-protein-dependent transport systems inner membrane component 1.436508 2.039355 0.7227651 1177 ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism] E binding-protein-dependent transport systems inner membrane component E TRUE TRUE 11 TRUE 0.338966464 1.265689e+00 0.6089455610 0.447122 1.0362192 Y 2.3800988 0.8427033 17.215 0.750231029 0.79858858 0.574471583 0.9225379967 TRUE 0.5 0.9225379967 TRUE 0.8770913066 0.8427033 0.70377190 0.6062304 395019 46419 3088211 3088212 1 347 Same + + 0.0000000 -6.811489253 0 6.850134e-01 397.0 1.436508 2.039355 0.7227651 1177 ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism] E binding-protein-dependent transport systems inner membrane component 1.867489 2.624374 0.8761006 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 - TRUE TRUE 12 TRUE 0.092348959 5.060582e-02 0.0336377986 0.447122 1.0362192 N 0.4361812 0.5674436 37.405 0.051679131 0.17745556 0.023907508 0.0116202101 FALSE 0.5 0.0116202101 FALSE 0.0127144974 0.5674436 0.19114652 0.2737739 395019 46419 3088213 3088214 1 12 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.532225 2.077108 0.7188915 - - - peptidase S8 and S53, subtilisin, kexin, sedolisin 4.191725 5.689495 1.2035179 - - - kinesin K39, putative FALSE TRUE 12 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 12.475 0.857812997 0.01428743 0.730570129 0.0804135376 FALSE 0.5 0.0804135376 FALSE 0.1179862827 0.4609152 0.02169197 0.1972381 395019 46419 3088215 3088216 1 -3 Same + + 12.7592679 0.852468906 0 5.934460e+01 NA 2.610281 3.624385 1.0543351 640 Predicted transcriptional regulators [Transcription] K transcriptional regulator, ArsR family 1.653143 2.307142 0.8548595 3832 Uncharacterized conserved protein [Function unknown] S Activator of Hsp90 ATPase 1 family protein TRUE TRUE 12 TRUE 2.375005732 2.430706e+00 0.4171333222 0.447122 0.1714116 U 0.2267807 0.8086319 6.530 0.827310285 0.74463706 0.682862366 0.9331986313 TRUE 0.5 0.9331986313 TRUE 0.8999618100 0.8086319 0.65251597 0.5483876 395019 46419 3088216 3088217 1 -3 Same + + 10.5114077 -7.142941504 0 8.046731e+00 NA 1.653143 2.307142 0.8548595 3832 Uncharacterized conserved protein [Function unknown] S Activator of Hsp90 ATPase 1 family protein 1.721266 2.319002 0.8412503 5649 Uncharacterized conserved protein [Function unknown] S conserved hypothetical protein TRUE TRUE 13 TRUE 2.145132902 1.151380e+00 0.0359481957 0.447122 0.1714116 U 0.2267807 0.7408194 6.530 0.827310285 0.62248912 0.682862366 0.8876352023 TRUE 0.5 0.8876352023 TRUE 0.8499298742 0.7408194 0.54174454 0.4509692 395019 46419 3088218 3088219 1 61 Same - - 0.9873867 4.897019227 0 -1.112703e+01 413.4 1.235238 1.664276 0.5245541 1048 Aconitase A [Energy production and conversion] C aconitate hydratase 1 1.792809 2.445364 0.8189821 2079 Uncharacterized protein involved in propionate catabolism [General function prediction only] R 2-methylcitrate dehydratase FALSE TRUE 13 TRUE -0.207664582 1.145076e-01 1.1926001439 0.447122 0.7427214 U 0.2267807 0.6469900 21.675 0.595646016 0.41125299 0.398343963 0.5071414823 TRUE 0.5 0.5071414823 TRUE 0.4593713527 0.6469900 0.36581115 0.3449860 395019 46419 3088219 3088220 1 -75 Same - - 0.0000000 6.956528183 0 6.956528e+00 NA 1.792809 2.445364 0.8189821 2079 Uncharacterized protein involved in propionate catabolism [General function prediction only] R 2-methylcitrate dehydratase 1.402459 1.886457 0.7970521 - - - conserved hypothetical protein FALSE TRUE 12 TRUE 0.092348959 1.067426e+00 1.7162470258 0.447122 0.1714116 U 0.2267807 0.7154132 2.295 0.293420860 0.57076310 0.157287148 0.3557492270 FALSE 0.5 0.3557492270 FALSE 0.2908674867 0.7154132 0.49691320 0.4194175 395019 46419 3088222 3088223 1 170 Same - - 1.0851893 14.327672585 0 2.030120e+01 413.4 1.612067 2.217763 0.8036194 2301 Citrate lyase beta subunit [Carbohydrate transport and metabolism] G HpcH/HpaI aldolase 1.349142 1.849897 0.6773479 39 Malate/lactate dehydrogenases [Energy production and conversion] C malate dehydrogenase - FALSE TRUE 11 TRUE -0.147818201 1.747511e+00 2.3238851652 0.447122 0.7427214 N 0.4361812 0.8110515 31.870 0.324398481 0.74861786 0.177503089 0.5884650525 TRUE 0.5 0.5884650525 TRUE 0.4782600009 0.8110515 0.65624747 0.5522756 395019 46419 3088224 3088225 1 172 Same + + 2.7392458 18.740759498 0 2.654162e+01 413.4 1.800002 2.510525 0.8368821 2188 Transcriptional regulators [Transcription] K transcriptional regulator, GntR family 2.166806 2.981946 0.8940278 2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Energy production and conversion] C succinate dehydrogenase, cytochrome b subunit - TRUE TRUE 11 TRUE 0.606279123 1.938263e+00 2.5174245322 0.447122 0.7427214 N 0.4361812 0.8799236 31.960 0.319408328 0.85275111 0.174189990 0.7310293213 TRUE 0.5 0.7310293213 TRUE 0.5935055126 0.8799236 0.75675462 0.6780270 395019 46419 3088225 3088226 1 5 Same + + 0.0000000 0.000000000 0 0.000000e+00 4.0 2.166806 2.981946 0.8940278 2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Energy production and conversion] C succinate dehydrogenase, cytochrome b subunit 1.713305 2.402326 0.9107585 2142 Succinate dehydrogenase, hydrophobic anchor subunit [Energy production and conversion] C succinate dehydrogenase, cytochrome b subunit C TRUE TRUE 12 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 3.5118509 Y 2.3800988 0.8739075 10.690 0.876772829 0.84430918 0.761785308 0.9747379395 TRUE 0.5 0.9747379395 TRUE 0.9548808362 0.8739075 0.74839323 0.6657381 395019 46419 3088226 3088227 1 4 Same + + 0.0000000 0.000000000 0 0.000000e+00 19.0 1.713305 2.402326 0.9107585 2142 Succinate dehydrogenase, hydrophobic anchor subunit [Energy production and conversion] C succinate dehydrogenase, cytochrome b subunit 1.265031 1.716395 0.5730202 1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] C succinate dehydrogenase, flavoprotein subunit C TRUE TRUE 13 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 2.7016095 Y 2.3800988 0.8413588 10.330 0.878366564 0.79654235 0.764466705 0.9658377479 TRUE 0.5 0.9658377479 TRUE 0.9444300619 0.8413588 0.70180065 0.6038148 395019 46419 3088227 3088228 1 22 Same + + 0.0000000 0.000000000 0 0.000000e+00 17.0 1.265031 1.716395 0.5730202 1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] C succinate dehydrogenase, flavoprotein subunit 1.279404 1.705609 0.6259370 479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion] C succinate dehydrogenase and fumarate reductase iron-sulfur protein C TRUE TRUE 14 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 2.8173318 Y 2.3800988 0.8463936 15.165 0.818474054 0.80417134 0.669586881 0.9487590268 TRUE 0.5 0.9487590268 TRUE 0.9166255325 0.8463936 0.70916122 0.6129201 395019 46419 3088228 3088229 1 86 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.279404 1.705609 0.6259370 479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion] C succinate dehydrogenase and fumarate reductase iron-sulfur protein 2.231418 3.130017 1.0342729 2938 Uncharacterized conserved protein [Function unknown] S protein of unknown function DUF339 TRUE TRUE 15 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 24.610 0.540037555 0.01428743 0.345420149 0.0167331181 FALSE 0.5 0.0167331181 FALSE 0.0253725254 0.4609152 0.02169197 0.1972381 395019 46419 3088229 3088230 1 54 Same + + 2.8618481 21.487200142 0 1.631065e+01 NA 2.231418 3.130017 1.0342729 2938 Uncharacterized conserved protein [Function unknown] S protein of unknown function DUF339 1.354354 1.795641 0.6143978 372 Citrate synthase [Energy production and conversion] C citrate synthase I TRUE TRUE 16 TRUE 0.667529492 1.611822e+00 2.6626288818 0.447122 0.1714116 U 0.2267807 0.8602438 20.605 0.623919426 0.82469720 0.427145245 0.8864236146 TRUE 0.5 0.8864236146 TRUE 0.8170315024 0.8602438 0.72911673 0.6388391 395019 46419 3088232 3088233 1 111 Same + + 0.0000000 -16.057117602 0 3.196946e+00 NA 1.830850 2.389833 0.8580950 346 Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism] E Glyoxalase/bleomycin resistance protein/dioxygenase 1.592191 2.152397 0.7340603 - - - protein of unknown function DUF1479 TRUE TRUE 17 TRUE 0.092348959 4.302212e-01 0.0704133500 0.447122 0.1714116 U 0.2267807 0.4806818 27.600 0.478640375 0.01428743 0.292097970 0.0131321195 FALSE 0.5 0.0131321195 FALSE 0.0199500327 0.4806818 0.02169197 0.2101040 395019 46419 3088233 3088234 1 278 Same + + 0.0000000 0.760095586 0 5.189335e-01 NA 1.592191 2.152397 0.7340603 - - - protein of unknown function DUF1479 1.563258 2.180317 0.8007125 1834 N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism] E Dimethylargininase TRUE TRUE 18 TRUE 0.092348959 1.160570e-02 0.3685776202 0.447122 0.1714116 U 0.2267807 0.5219783 35.940 0.100056018 0.01428743 0.047592027 0.0016089121 FALSE 0.5 0.0016089121 FALSE 0.0093726564 0.5219783 0.07842513 0.2388459 395019 46419 3088234 3088235 1 98 Same + + 1.6397433 0.760095586 0 -4.540958e-01 413.4 1.563258 2.180317 0.8007125 1834 N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism] E Dimethylargininase 1.571494 2.149180 0.8080214 1522 Transcriptional regulators [Transcription] K transcriptional regulator, AsnC family - TRUE TRUE 19 TRUE 0.183918378 -2.185010e-02 0.3685776202 0.447122 0.7427214 N 0.4361812 0.6039963 26.150 0.509940203 0.29253624 0.318654979 0.3008335346 FALSE 0.5 0.3008335346 FALSE 0.2826868138 0.6039963 0.27469338 0.3047367 395019 46419 3088239 3088240 1 49 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 3.983021 5.408527 1.0635363 - - - hypothetical protein 1.672285 2.299195 0.8140248 - - - conserved hypothetical protein TRUE TRUE 20 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 19.850 0.649364972 0.01428743 0.454259027 0.0261416637 FALSE 0.5 0.0261416637 FALSE 0.0394438915 0.4609152 0.02169197 0.1972381 395019 46419 3088240 3088241 1 34 Same + + 0.0000000 0.200270538 0 2.002705e-01 NA 1.672285 2.299195 0.8140248 - - - conserved hypothetical protein 2.126837 2.948034 0.9278513 - - - conserved hypothetical protein TRUE TRUE 21 TRUE 0.092348959 -3.067933e-02 0.1300410454 0.447122 0.1714116 U 0.2267807 0.4861626 17.480 0.741400903 0.01428743 0.563046790 0.0398976677 FALSE 0.5 0.0398976677 FALSE 0.0597700535 0.4861626 0.02169197 0.2137696 395019 46419 3088241 3088242 1 2 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.126837 2.948034 0.9278513 - - - conserved hypothetical protein 1.605373 2.126257 0.7348245 - - - phosphoesterase TRUE TRUE 22 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 9.590 0.876904728 0.01428743 0.762006878 0.0935919844 FALSE 0.5 0.0935919844 FALSE 0.1364088863 0.4609152 0.02169197 0.1972381 395019 46419 3088242 3088243 1 12 Same + + 0.0000000 0.000000000 0 0.000000e+00 413.4 1.605373 2.126257 0.7348245 - - - phosphoesterase 1.780485 2.389125 0.7935700 1858 Cytochrome c peroxidase [Inorganic ion transport and metabolism] P Di-haem cytochrome c peroxidase TRUE TRUE 23 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.7427214 U 0.2267807 0.5080040 12.475 0.857812997 0.01428743 0.730570129 0.0804135376 FALSE 0.5 0.0804135376 FALSE 0.2076072644 0.5080040 0.04162046 0.2288231 395019 46419 3088243 3088244 1 186 Same + + 0.0000000 0.000000000 0 -3.930036e+00 413.4 1.780485 2.389125 0.7935700 1858 Cytochrome c peroxidase [Inorganic ion transport and metabolism] P Di-haem cytochrome c peroxidase 1.418581 1.927585 0.6775698 65 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] E 3-isopropylmalate dehydratase, large subunit - TRUE TRUE 24 TRUE 0.092348959 5.688324e-02 -0.0371130024 0.447122 0.7427214 N 0.4361812 0.5330867 32.610 0.281542792 0.05490012 0.149751982 0.0222568579 FALSE 0.5 0.0222568579 FALSE 0.0448181572 0.5330867 0.10693228 0.2470428 395019 46419 3088244 3088245 1 4 Same + + 0.0000000 4.228121537 0 3.925352e+00 413.4 1.418581 1.927585 0.6775698 65 3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] E 3-isopropylmalate dehydratase, large subunit 2.080099 2.956164 1.1329386 - - - Entericidin EcnAB TRUE TRUE 25 TRUE 0.092348959 5.414901e-01 1.0535900314 0.447122 0.7427214 U 0.2267807 0.6682520 10.330 0.878366564 0.46431772 0.764466705 0.8622470485 TRUE 0.5 0.8622470485 TRUE 0.8328480332 0.6682520 0.40827421 0.3666310 395019 46419 3088245 3088246 1 65 Same + + 0.0000000 2.781511429 0 3.925352e+00 413.4 2.080099 2.956164 1.1329386 - - - Entericidin EcnAB 1.272227 1.654319 0.6160380 66 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] E 3-isopropylmalate dehydratase, small subunit TRUE TRUE 26 TRUE 0.092348959 5.414901e-01 0.8193578584 0.447122 0.7427214 U 0.2267807 0.6366296 22.300 0.580425254 0.38411150 0.383384659 0.4631634379 FALSE 0.5 0.4631634379 FALSE 0.4209888442 0.6366296 0.34451569 0.3348740 395019 46419 3088246 3088247 1 77 Same + + 90.8335383 26.175290168 0 1.557888e+02 8.0 1.272227 1.654319 0.6160380 66 3-isopropylmalate dehydratase small subunit [Amino acid transport and metabolism] E 3-isopropylmalate dehydratase, small subunit 1.243713 1.697401 0.5923237 473 Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] E 3-isopropylmalate dehydrogenase E TRUE TRUE 27 TRUE 4.087109456 2.873415e+00 3.1326644990 0.447122 3.2238980 Y 2.3800988 0.9975497 23.650 0.552211667 0.99734951 0.356608436 0.9978496380 TRUE 0.5 0.9978496380 TRUE 0.9225939601 0.9975497 0.90623556 0.9915248 395019 46419 3088247 3088248 1 313 Same + + 29.0234645 -46.942493806 0 8.601702e+01 281.0 1.243713 1.697401 0.5923237 473 Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] E 3-isopropylmalate dehydrogenase 1.298996 1.756547 0.6392056 136 Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] E aspartate-semialdehyde dehydrogenase E TRUE TRUE 28 TRUE 3.210337968 2.572431e+00 0.1414121545 0.447122 1.6223548 Y 2.3800988 0.9611426 36.665 0.073302590 0.95637602 0.034331508 0.6342546045 TRUE 0.5 0.6342546045 TRUE 0.3318905428 0.9611426 0.86263907 0.8766667 395019 46419 3088248 3088249 1 477 Same + + 3.9485035 -3.459576271 0 5.377006e+00 413.4 1.298996 1.756547 0.6392056 136 Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] E aspartate-semialdehyde dehydrogenase 1.973571 2.758523 0.8874794 - - - conserved hypothetical protein TRUE TRUE 29 TRUE 0.989967644 7.928897e-01 0.0148546311 0.447122 0.7427214 U 0.2267807 0.6414543 38.620 0.027116322 0.39686005 0.012372191 0.0180092877 FALSE 0.5 0.0180092877 FALSE 0.0150751308 0.6414543 0.35448321 0.3395488 395019 46419 3088249 3088250 1 -121 Same + + 0.0000000 0.000000000 0 0.000000e+00 413.4 1.973571 2.758523 0.8874794 - - - conserved hypothetical protein 4.222477 5.831159 1.1827869 135 Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism] E Phosphoribosylanthranilate isomerase TRUE TRUE 30 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.7427214 U 0.2267807 0.5080040 1.935 0.234726235 0.01428743 0.121154803 0.0044261098 FALSE 0.5 0.0044261098 FALSE 0.0131452062 0.5080040 0.04162046 0.2288231 395019 46419 3088250 3088251 1 59 Same + + 0.0000000 0.000000000 0 0.000000e+00 5.0 4.222477 5.831159 1.1827869 135 Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism] E Phosphoribosylanthranilate isomerase 1.386076 1.861436 0.6626180 133 Tryptophan synthase beta chain [Amino acid transport and metabolism] E tryptophan synthase, beta subunit E TRUE TRUE 31 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 3.4142311 Y 2.3800988 0.8703119 21.340 0.603969939 0.83920801 0.406683772 0.8883881367 TRUE 0.5 0.8883881367 TRUE 0.8154075290 0.8703119 0.74335944 0.6585259 395019 46419 3088251 3088252 1 8 Same + + 0.0000000 9.869390281 0 -7.551662e-01 413.4 1.386076 1.861436 0.6626180 133 Tryptophan synthase beta chain [Amino acid transport and metabolism] E tryptophan synthase, beta subunit 1.494508 2.011112 0.7336976 863 DNA modification methylase [DNA replication, recombination, and repair] L DNA methylase N-4/N-6 domain protein - TRUE TRUE 32 TRUE 0.092348959 -1.212389e-02 2.0348333827 0.447122 0.7427214 N 0.4361812 0.7965228 11.370 0.870353690 0.72435070 0.751076838 0.9463553230 TRUE 0.5 0.9463553230 TRUE 0.9206986920 0.7965228 0.63362237 0.5293946 395019 46419 3088252 3088253 1 91 Same + + 0.0000000 9.869390281 0 -5.452000e-01 413.4 1.494508 2.011112 0.7336976 863 DNA modification methylase [DNA replication, recombination, and repair] L DNA methylase N-4/N-6 domain protein 1.625784 2.261313 0.8142008 159 Tryptophan synthase alpha chain [Amino acid transport and metabolism] E tryptophan synthase, alpha subunit - TRUE TRUE 33 TRUE 0.092348959 -1.828112e-02 2.0348333827 0.447122 0.7427214 N 0.4361812 0.7964934 25.395 0.524652520 0.72430072 0.331582614 0.7435659683 TRUE 0.5 0.7435659683 TRUE 0.6561715149 0.7964934 0.63357608 0.5293495 395019 46419 3088253 3088254 1 64 Same + + 61.5159748 26.100208012 0 2.106721e+02 413.4 1.625784 2.261313 0.8142008 159 Tryptophan synthase alpha chain [Amino acid transport and metabolism] E tryptophan synthase, alpha subunit 1.387249 1.885095 0.7070960 777 Acetyl-CoA carboxylase beta subunit [Lipid metabolism] I acetyl-CoA carboxylase, carboxyl transferase, beta subunit - TRUE TRUE 34 TRUE 3.834832549 3.010645e+00 3.0881001559 0.447122 0.7427214 N 0.4361812 0.9842567 22.160 0.583855337 0.98274056 0.386723571 0.9876369906 TRUE 0.5 0.9876369906 TRUE 0.9194758132 0.9842567 0.89057480 0.9472742 395019 46419 3088254 3088255 1 102 Same + + 69.9824042 7.445847147 0 4.398975e+02 413.4 1.387249 1.885095 0.7070960 777 Acetyl-CoA carboxylase beta subunit [Lipid metabolism] I acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1.663267 2.277672 0.7706213 285 Folylpolyglutamate synthase [Coenzyme metabolism] H FolC bifunctional protein - TRUE TRUE 35 TRUE 3.938614800 3.382287e+00 1.7907413351 0.447122 0.7427214 N 0.4361812 0.9686469 26.575 0.502231357 0.96507361 0.311996827 0.9653732140 TRUE 0.5 0.9653732140 TRUE 0.8728030876 0.9686469 0.87180890 0.8987672 395019 46419 3088255 3088256 1 30 Same + + 6.3430882 26.175290168 0 1.606940e+02 NA 1.663267 2.277672 0.7706213 285 Folylpolyglutamate synthase [Coenzyme metabolism] H FolC bifunctional protein 1.997492 2.746314 0.9238817 3147 Uncharacterized protein conserved in bacteria [Function unknown] S Sporulation domain protein TRUE TRUE 36 TRUE 1.532514755 2.887201e+00 3.1326644990 0.447122 0.1714116 U 0.2267807 0.9314815 16.820 0.764891635 0.92062698 0.593863869 0.9741834555 TRUE 0.5 0.9741834555 TRUE 0.9389562771 0.9314815 0.82541736 0.7961958 395019 46419 3088256 3088257 1 7 Same + + 6.3430882 26.175290168 0 1.507334e+02 NA 1.997492 2.746314 0.9238817 3147 Uncharacterized protein conserved in bacteria [Function unknown] S Sporulation domain protein 1.859964 2.625535 0.8705773 1286 Uncharacterized membrane protein, required for colicin V production [General function prediction only] R Colicin V production protein TRUE TRUE 37 TRUE 1.532514755 2.855735e+00 3.1326644990 0.447122 0.1714116 U 0.2267807 0.9314223 11.165 0.872626477 0.92055341 0.754851666 0.9875594296 TRUE 0.5 0.9875594296 TRUE 0.9700363462 0.9314223 0.82534152 0.7960454 395019 46419 3088257 3088258 1 53 Same + + 29.4683793 26.175290168 0 3.270598e+02 413.4 1.859964 2.625535 0.8705773 1286 Uncharacterized membrane protein, required for colicin V production [General function prediction only] R Colicin V production protein 1.363657 1.838807 0.6542331 34 Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] F amidophosphoribosyltransferase TRUE TRUE 38 TRUE 3.241812137 3.256256e+00 3.1326644990 0.447122 0.7427214 U 0.2267807 0.9769665 20.440 0.628882002 0.97455991 0.432341961 0.9848290118 TRUE 0.5 0.9848290118 TRUE 0.9267363492 0.9769665 0.88186187 0.9241781 395019 46419 3088258 3088259 1 233 Same + + 11.8332095 16.987783918 0 4.128382e+01 413.4 1.363657 1.838807 0.6542331 34 Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] F amidophosphoribosyltransferase 1.343889 1.833061 0.6635074 626 Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism] E O-succinylhomoserine sulfhydrylase - TRUE TRUE 39 TRUE 2.267571176 2.193640e+00 2.4421089794 0.447122 0.7427214 N 0.4361812 0.9461551 34.570 0.165590347 0.93859251 0.081890517 0.7520623946 TRUE 0.5 0.7520623946 TRUE 0.5178207157 0.9461551 0.84402950 0.8347002 395019 46419 3088260 3088261 1 -13 Same - - 0.0000000 0.189630474 0 1.896305e-01 54.0 1.545181 2.156716 0.7703690 1089 GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] M NAD-dependent epimerase/dehydratase 2.503125 3.442103 0.9452265 1089 GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] M GDP-mannose 4,6-dehydratase M FALSE TRUE 39 TRUE 0.092348959 -4.387533e-02 0.0900908036 0.447122 2.1885989 Y 2.3800988 0.8286456 3.645 0.527820608 0.77686602 0.334405025 0.7955797217 TRUE 0.5 0.7955797217 TRUE 0.7065707805 0.8286456 0.68295591 0.5815334 395019 46419 3088262 3088263 1 10 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 3.537059 4.834306 0.9421134 - - - apical junction molecule protein 1, isoform a, putative 6.961966 9.016736 1.0882974 - - - hypothetical protein TRUE TRUE 39 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 11.775 0.865472190 0.01428743 0.743030248 0.0852954313 FALSE 0.5 0.0852954313 FALSE 0.1248395475 0.4609152 0.02169197 0.1972381 395019 46419 3088267 3088268 1 -3 Same + + 0.0000000 4.016806250 0 4.016806e+00 413.4 1.577794 2.213443 0.7568781 2244 Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only] R polysaccharide biosynthesis protein 1.525253 2.113519 0.7190562 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M glycosyl transferase, group 1 TRUE TRUE 40 TRUE 0.092348959 5.490591e-01 1.0164960239 0.447122 0.7427214 U 0.2267807 0.6633853 6.530 0.827310285 0.45247174 0.682862366 0.7983469461 TRUE 0.5 0.7983469461 TRUE 0.7605671910 0.6633853 0.39869831 0.3615668 395019 46419 3088270 3088271 1 230 Same + + 0.0000000 1.736785351 0 1.736785e+00 NA 1.544081 2.231513 1.0767377 - - - conserved hypothetical protein 1.560208 2.181529 0.7929217 1210 UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] M UTP-glucose-1-phosphate uridylyltransferase GalU TRUE TRUE 41 TRUE 0.092348959 2.356982e-01 0.6285664256 0.447122 0.1714116 U 0.2267807 0.5620375 34.470 0.171025813 0.15916472 0.084857964 0.0375853630 FALSE 0.5 0.0375853630 FALSE 0.0428421015 0.5620375 0.17827587 0.2694230 395019 46419 3088274 3088275 1 290 Same - - 0.0000000 -32.289989574 0 -9.766071e+00 413.4 1.663075 2.278380 0.8904786 3865 Uncharacterized protein conserved in bacteria [Function unknown] S 3-demethylubiquinone-9 3-methyltransferase 1.583211 2.096086 0.6778400 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M porin, Gram-negative type FALSE TRUE 41 TRUE 0.092348959 1.073573e-01 0.1165412781 0.447122 0.7427214 U 0.2267807 0.5322892 36.255 0.087734611 0.05186736 0.041433850 0.0052335448 FALSE 0.5 0.0052335448 FALSE 0.0111460014 0.5322892 0.10490718 0.2464473 395019 46419 3088275 3088276 1 442 Same - - 0.0000000 -52.474999179 0 5.110133e+00 413.4 1.583211 2.096086 0.6778400 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M porin, Gram-negative type 1.634609 2.281398 0.7773642 1295 Predicted membrane protein [Function unknown] S putative ribonuclease BN FALSE TRUE 40 TRUE 0.092348959 7.336956e-01 0.1494422460 0.447122 0.7427214 U 0.2267807 0.5417468 38.280 0.032766092 0.08725720 0.014997331 0.0032280616 FALSE 0.5 0.0032280616 FALSE 0.0049794535 0.5417468 0.12871179 0.2535797 395019 46419 3088279 3088280 1 11 Same + + 37.2528027 7.277531006 0 1.694066e+02 3.0 1.399209 1.862017 0.6256807 - - - formate dehydrogenase, alpha subunit 1.484815 1.988957 0.7085680 437 Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion] C formate dehydrogenase, beta subunit TRUE TRUE 40 TRUE 3.448334351 2.901018e+00 1.7680746630 0.447122 3.6543981 U 0.2267807 0.9819990 12.085 0.861776343 0.98022005 0.736992812 0.9967738385 TRUE 0.5 0.9967738385 TRUE 0.9801489864 0.9819990 0.88788597 0.9400361 395019 46419 3088280 3088281 1 -3 Same + + 36.0704669 8.941880404 0 1.765618e+02 3.0 1.484815 1.988957 0.7085680 437 Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion] C formate dehydrogenase, beta subunit 1.474251 2.015591 0.7443361 2864 Cytochrome b subunit of formate dehydrogenase [Energy production and conversion] C formate dehydrogenase, gamma subunit C TRUE TRUE 41 TRUE 3.405079644 2.920810e+00 1.9447460070 0.447122 3.6543981 Y 2.3800988 0.9937609 6.530 0.827310285 0.99322548 0.682862366 0.9985782897 TRUE 0.5 0.9985782897 TRUE 0.9777755158 0.9937609 0.90180138 0.9786197 395019 46419 3088281 3088282 1 98 Same + + 15.3845012 3.248313713 0 1.441909e+02 NA 1.474251 2.015591 0.7443361 2864 Cytochrome b subunit of formate dehydrogenase [Energy production and conversion] C formate dehydrogenase, gamma subunit 1.712781 2.377099 0.8239622 3058 Uncharacterized protein involved in formate dehydrogenase formation [Posttranslational modification, protein turnover, chaperones] O formate dehydrogenase accessory protein FdhE - TRUE TRUE 42 TRUE 2.562343428 2.834196e+00 0.8852296658 0.447122 0.1714116 N 0.4361812 0.8733500 26.150 0.509940203 0.84352091 0.318654979 0.8486983525 TRUE 0.5 0.8486983525 TRUE 0.7550436612 0.8733500 0.74761445 0.6646133 395019 46419 3088282 3088283 1 77 Same + + 6.2822273 7.173206097 0 5.307105e+01 NA 1.712781 2.377099 0.8239622 3058 Uncharacterized protein involved in formate dehydrogenase formation [Posttranslational modification, protein turnover, chaperones] O formate dehydrogenase accessory protein FdhE 1.600049 2.272590 0.7934875 1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism] E L-seryl-tRNA(Sec) selenium transferase - TRUE TRUE 43 TRUE 1.521338671 2.353293e+00 1.7469641024 0.447122 0.1714116 N 0.4361812 0.8651356 23.650 0.552211667 0.83178968 0.356608436 0.8591169962 TRUE 0.5 0.8591169962 TRUE 0.7747311739 0.8651356 0.73606408 0.6483122 395019 46419 3088283 3088284 1 -3 Same + + 49.0913963 7.438801382 0 2.112962e+02 2.0 1.600049 2.272590 0.7934875 1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism] E L-seryl-tRNA(Sec) selenium transferase 1.670223 2.323443 0.7898261 3276 Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis] J selenocysteine-specific translation elongation factor - TRUE TRUE 44 TRUE 3.679961485 3.014666e+00 1.7864796635 0.447122 3.7868824 N 0.4361812 0.9863543 6.530 0.827310285 0.98507196 0.682862366 0.9968467292 TRUE 0.5 0.9968467292 TRUE 0.9756155957 0.9863543 0.89306532 0.9540693 395019 46419 3088285 3088286 1 111 Same - - 0.0000000 0.000000000 0 0.000000e+00 413.4 2.054236 2.826087 0.8765509 1752 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] R Patatin 1.910981 2.624647 0.8422390 513 Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] LKJ ATP-dependent DNA helicase, RecQ family FALSE TRUE 44 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.7427214 U 0.2267807 0.5080040 27.600 0.478640375 0.01428743 0.292097970 0.0131321195 FALSE 0.5 0.0131321195 FALSE 0.0383409099 0.5080040 0.04162046 0.2288231 395019 46419 3088291 3088292 1 182 Same + + 2.7515353 0.518108103 0 1.457049e+00 413.4 1.684875 2.363738 0.8418713 1609 Transcriptional regulators [Transcription] K transcriptional regulator, LacI family 1.550857 2.121659 0.7308354 129 Dihydroxyacid dehydratase/phosphogluconate dehydratase [Amino acid transport and metabolism / Carbohydrate transport and metabolism] EG Dihydroxy-acid dehydratase - TRUE TRUE 44 TRUE 0.611695654 1.968528e-01 0.2469061599 0.447122 0.7427214 N 0.4361812 0.6435783 32.445 0.291460179 0.40241169 0.156035249 0.2169160898 FALSE 0.5 0.2169160898 FALSE 0.1871415886 0.6435783 0.35884319 0.3416256 395019 46419 3088292 3088293 1 25 Same + + 4.4228486 -0.094222560 0 2.034118e+00 413.4 1.550857 2.121659 0.7308354 129 Dihydroxyacid dehydratase/phosphogluconate dehydratase [Amino acid transport and metabolism / Carbohydrate transport and metabolism] EG Dihydroxy-acid dehydratase 1.556453 2.151872 0.7331533 3970 Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only] R conserved hypothetical protein TRUE TRUE 45 TRUE 1.099350354 2.730352e-01 -0.0264482008 0.447122 0.7427214 U 0.2267807 0.6460716 15.685 0.805563855 0.40888225 0.650607987 0.7413219262 TRUE 0.5 0.7413219262 TRUE 0.7033149840 0.6460716 0.36393978 0.3440784 395019 46419 3088294 3088295 1 296 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.594702 3.594124 1.0124836 - - - conserved hypothetical protein 1.384708 1.914229 0.6789525 2233 Xanthine/uracil permeases [Nucleotide transport and metabolism] F uracil-xanthine permease FALSE TRUE 45 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 36.395 0.082603880 0.01428743 0.038895349 0.0013034098 FALSE 0.5 0.0013034098 FALSE 0.0019925114 0.4609152 0.02169197 0.1972381 395019 46419 3088296 3088297 1 -153 Same + + 0.0000000 2.388279779 0 2.388280e+00 413.4 1.968053 2.686646 0.8451555 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 1.964068 2.740999 0.8766866 554 Glycerol kinase [Energy production and conversion] C carbohydrate kinase, FGGY - TRUE TRUE 45 TRUE 0.092348959 3.295542e-01 0.7542976486 0.447122 0.7427214 N 0.4361812 0.6483940 1.710 0.200985570 0.41486440 0.101572625 0.1513518031 FALSE 0.5 0.1513518031 FALSE 0.1280747450 0.6483940 0.36866604 0.3463777 395019 46419 3088297 3088298 1 19 Same + + 0.0000000 2.388279779 0 2.388280e+00 413.4 1.964068 2.740999 0.8766866 554 Glycerol kinase [Energy production and conversion] C carbohydrate kinase, FGGY 1.498914 2.090702 0.7180627 578 Glycerol-3-phosphate dehydrogenase [Energy production and conversion] C FAD dependent oxidoreductase C TRUE TRUE 46 TRUE 0.092348959 3.295542e-01 0.7542976486 0.447122 0.7427214 Y 2.3800988 0.8183479 14.495 0.830895618 0.76047994 0.688316838 0.9397607142 TRUE 0.5 0.9397607142 TRUE 0.9079200572 0.8183479 0.66741380 0.5641954 395019 46419 3088298 3088299 1 -3 Same + + 14.6432955 1.584843128 0 2.880207e+01 371.0 1.498914 2.090702 0.7180627 578 Glycerol-3-phosphate dehydrogenase [Energy production and conversion] C FAD dependent oxidoreductase 1.536360 2.127762 0.7174586 277 FAD/FMN-containing dehydrogenases [Energy production and conversion] C FAD linked oxidase domain protein C TRUE TRUE 47 TRUE 2.500183156 1.991972e+00 0.5987960938 0.447122 1.3442439 Y 2.3800988 0.9517501 6.530 0.827310285 0.94529675 0.682862366 0.9880648343 TRUE 0.5 0.9880648343 TRUE 0.9647475960 0.9517501 0.85102328 0.8500407 395019 46419 3088299 3088300 1 6 Same + + 1.8082888 1.595834377 0 -2.284739e+00 413.4 1.536360 2.127762 0.7174586 277 FAD/FMN-containing dehydrogenases [Energy production and conversion] C FAD linked oxidase domain protein 1.477500 2.065628 0.8102156 1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription] K glycerol-3-phosphate responsive antiterminator - TRUE TRUE 48 TRUE 0.253199905 2.716280e-02 0.6021726236 0.447122 0.7427214 N 0.4361812 0.6458311 10.980 0.874461909 0.40826007 0.757913395 0.8277603240 TRUE 0.5 0.8277603240 TRUE 0.7990831712 0.6458311 0.36344901 0.3438411 395019 46419 3088300 3088301 1 35 Same + + 0.0000000 0.837089914 0 7.830227e-01 413.4 1.477500 2.065628 0.8102156 1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription] K glycerol-3-phosphate responsive antiterminator 1.949445 2.633084 0.8888464 1359 Uncharacterized conserved protein [Function unknown] S Antibiotic biosynthesis monooxygenase TRUE TRUE 49 TRUE 0.092348959 8.545743e-02 0.4058016152 0.447122 0.7427214 U 0.2267807 0.5746858 17.655 0.736285486 0.20141933 0.556513701 0.4132136024 FALSE 0.5 0.4132136024 FALSE 0.4233072809 0.5746858 0.20817489 0.2796915 395019 46419 3088301 3088302 1 -3 Same + + 0.0000000 -0.181359544 0 -2.867201e-01 413.4 1.949445 2.633084 0.8888464 1359 Uncharacterized conserved protein [Function unknown] S Antibiotic biosynthesis monooxygenase 1.463565 2.073879 0.7637642 1454 Alcohol dehydrogenase, class IV [Energy production and conversion] C iron-containing alcohol dehydrogenase TRUE TRUE 50 TRUE 0.092348959 -2.808860e-02 -0.0257959448 0.447122 0.7427214 U 0.2267807 0.5101393 6.530 0.827310285 0.01428743 0.682862366 0.0649306360 FALSE 0.5 0.0649306360 FALSE 0.1921972718 0.5101393 0.04731401 0.2303343 395019 46419 3088305 3088306 1 263 Same - - 0.0000000 -6.612400871 0 9.075254e-02 NA 1.662791 2.266828 0.8040935 715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] P aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein 1.709661 2.338864 0.8883468 2343 Uncharacterized protein conserved in bacteria [Function unknown] S protein of unknown function DUF427 FALSE TRUE 50 TRUE 0.092348959 -9.103667e-02 0.0320751762 0.447122 0.1714116 U 0.2267807 0.4711580 35.525 0.117935257 0.01428743 0.056686875 0.0019342216 FALSE 0.5 0.0019342216 FALSE 0.0029558408 0.4711580 0.02169197 0.2038369 395019 46419 3088308 3088309 1 175 Same - - 0.0000000 -2.868165825 0 -3.738440e+00 2.0 1.624407 2.243810 0.7934354 2175 Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q Taurine dioxygenase 1.620879 2.261371 0.8047765 2175 Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q Taurine dioxygenase Q FALSE TRUE 49 TRUE 0.092348959 5.559707e-02 0.0109311859 0.447122 3.7868824 Y 2.3800988 0.8869216 32.070 0.313227006 0.86242677 0.170116541 0.7408744136 TRUE 0.5 0.7408744136 TRUE 0.5993935220 0.8869216 0.76638575 0.6926819 395019 46419 3088309 3088310 1 84 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.620879 2.261371 0.8047765 2175 Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q Taurine dioxygenase 7.543218 10.342016 1.2209867 - - - conserved hypothetical protein FALSE TRUE 48 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 24.395 0.542990013 0.01428743 0.348113875 0.0169299047 FALSE 0.5 0.0169299047 FALSE 0.0256682617 0.4609152 0.02169197 0.1972381 395019 46419 3088310 3088311 1 -910 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 7.543218 10.342016 1.2209867 - - - conserved hypothetical protein 1.485468 2.047938 0.7443587 1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter related FALSE TRUE 47 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 0.710 0.088078410 0.01428743 0.041604488 0.0013980036 FALSE 0.5 0.0013980036 FALSE 0.0021370090 0.4609152 0.02169197 0.1972381 395019 46419 3088311 3088312 1 40 Same - - 8.4424696 2.876896331 0 1.114029e+01 413.4 1.485468 2.047938 0.7443587 1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter related 1.630463 2.289312 0.8252904 600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] P binding-protein-dependent transport systems inner membrane component P FALSE TRUE 46 TRUE 1.871438208 1.379163e+00 0.8365779598 0.447122 0.7427214 Y 2.3800988 0.9283563 18.395 0.711199269 0.91672725 0.525350694 0.9644255296 TRUE 0.5 0.9644255296 TRUE 0.9188698950 0.9283563 0.82140193 0.7883023 395019 46419 3088312 3088313 1 34 Same - - 3.5332810 3.635640794 0 1.191507e+01 397.0 1.630463 2.289312 0.8252904 600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] P binding-protein-dependent transport systems inner membrane component 1.451345 2.073979 0.7726108 600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] P binding-protein-dependent transport systems inner membrane component P FALSE TRUE 45 TRUE 0.867518164 1.422133e+00 0.9533720008 0.447122 1.0362192 Y 2.3800988 0.8982921 17.480 0.741400903 0.87782671 0.563046790 0.9537028320 TRUE 0.5 0.9537028320 TRUE 0.9112967810 0.8982921 0.78182099 0.7173599 395019 46419 3088313 3088314 1 14 Same - - 3.5332810 4.505139364 0 7.737918e+00 397.0 1.451345 2.073979 0.7726108 600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] P binding-protein-dependent transport systems inner membrane component 1.402579 1.902263 0.6797613 715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism] P ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein P FALSE TRUE 44 TRUE 0.867518164 1.123522e+00 1.1033347800 0.447122 1.0362192 Y 2.3800988 0.9054177 13.190 0.850392442 0.88728024 0.718686682 0.9781388051 TRUE 0.5 0.9781388051 TRUE 0.9556734967 0.9054177 0.79136140 0.7333994 395019 46419 3088319 3088320 1 0 Same + + 0.0000000 0.104333596 0 1.043336e-01 NA 4.240838 5.621427 1.1091689 - - - hypothetical protein 1.544159 2.091111 0.7899457 - - - conserved hypothetical protein TRUE TRUE 44 TRUE 0.092348959 -5.267904e-02 0.0718024715 0.447122 0.1714116 U 0.2267807 0.4773399 8.905 0.875024512 0.01428743 0.758854277 0.0921342080 FALSE 0.5 0.0921342080 FALSE 0.1343830750 0.4773399 0.02169197 0.2078902 395019 46419 3088321 3088322 1 406 Same - - 0.0000000 -2.066224628 0 3.816170e-01 NA 1.818945 2.437550 0.8167995 - - - conserved hypothetical protein 1.546370 2.127446 0.7535983 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 FALSE TRUE 44 TRUE 0.092348959 -1.326917e-02 -0.0037340735 0.447122 0.1714116 U 0.2267807 0.4664164 38.060 0.036902413 0.01428743 0.016929824 0.0005550693 FALSE 0.5 0.0005550693 FALSE 0.0008488659 0.4664164 0.02169197 0.2007643 395019 46419 3088324 3088325 1 128 Same - - 0.0000000 0.000000000 0 0.000000e+00 413.4 1.584857 2.200175 0.7617035 1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion] C aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 5.647196 7.653989 1.1916149 1335 Amidases related to nicotinamidase [Secondary metabolites biosynthesis, transport, and catabolism] Q isochorismatase hydrolase - FALSE TRUE 43 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.7427214 N 0.4361812 0.5320150 28.995 0.445521061 0.05082275 0.265317693 0.0412477626 FALSE 0.5 0.0412477626 FALSE 0.0854829576 0.5320150 0.10421029 0.2462429 395019 46419 3088325 3088326 1 -1723 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 5.647196 7.653989 1.1916149 1335 Amidases related to nicotinamidase [Secondary metabolites biosynthesis, transport, and catabolism] Q isochorismatase hydrolase 1.426141 1.950432 0.6997341 - - - conserved hypothetical protein FALSE TRUE 42 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 0.200 0.053770649 0.01428743 0.024904592 0.0008229912 FALSE 0.5 0.0008229912 FALSE 0.0012584195 0.4609152 0.02169197 0.1972381 395019 46419 3088326 3088327 1 37 Same - - 1.4490953 5.910256843 0 4.294907e+00 NA 1.426141 1.950432 0.6997341 - - - conserved hypothetical protein 1.506818 2.080141 0.8065541 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] R alpha/beta hydrolase fold FALSE TRUE 41 TRUE -0.003423999 5.880975e-01 1.4406199238 0.447122 0.1714116 U 0.2267807 0.6661790 17.965 0.726891057 0.45929288 0.544675516 0.6933262485 TRUE 0.5 0.6933262485 TRUE 0.6435792343 0.6661790 0.40420544 0.3644656 395019 46419 3088327 3088328 1 28 Same - - 1.4490953 5.864262200 0 1.214181e+01 NA 1.506818 2.080141 0.8065541 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] R alpha/beta hydrolase fold 1.465193 2.064076 0.7705768 3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism] Q Asp/Glu racemase FALSE TRUE 40 TRUE -0.003423999 1.434720e+00 1.4293045896 0.447122 0.1714116 U 0.2267807 0.6702114 16.375 0.781940023 0.46903847 0.617105847 0.7600590190 TRUE 0.5 0.7600590190 TRUE 0.7153968809 0.6702114 0.41210600 0.3686888 395019 46419 3088329 3088330 1 217 Same + + 1.4490953 7.809897752 0 6.069385e+00 371.0 1.470334 2.016027 0.6957305 654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] HC Salicylate 1-monooxygenase 1.668215 2.247877 0.8139385 2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion] C (2Fe-2S)-binding domain protein C TRUE TRUE 40 TRUE -0.003423999 9.200755e-01 1.8394153103 0.447122 1.3442439 Y 2.3800988 0.9101146 33.960 0.199813193 0.89343057 0.100906904 0.6767355046 TRUE 0.5 0.6767355046 TRUE 0.4959673137 0.9101146 0.79759515 0.7442253 395019 46419 3088330 3088331 1 -10 Same + + 0.0000000 4.613981915 0 4.613982e+00 95.0 1.668215 2.247877 0.8139385 2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion] C (2Fe-2S)-binding domain protein 1.752633 2.393014 0.8087528 2010 Cytochrome c, mono- and diheme variants [Energy production and conversion] C cytochrome c, class I C TRUE TRUE 41 TRUE 0.092348959 6.457028e-01 1.1275306874 0.447122 1.9388042 Y 2.3800988 0.8939593 3.870 0.563632738 0.87200468 0.367302356 0.8979562537 TRUE 0.5 0.8979562537 TRUE 0.8173138681 0.8939593 0.77597019 0.7078263 395019 46419 3088331 3088332 1 142 Same + + 0.0000000 0.183849798 0 1.838498e-01 NA 1.752633 2.393014 0.8087528 2010 Cytochrome c, mono- and diheme variants [Energy production and conversion] C cytochrome c, class I 2.363992 3.291531 0.9932937 - - - hypothetical protein TRUE TRUE 42 TRUE 0.092348959 -4.665843e-02 0.0840076965 0.447122 0.1714116 U 0.2267807 0.4791983 30.125 0.411759909 0.01428743 0.239318277 0.0100440574 FALSE 0.5 0.0100440574 FALSE 0.0152835448 0.4791983 0.02169197 0.2091193 395019 46419 3088333 3088334 1 12 Same - - 4.4832972 1.307105829 0 5.082609e+00 19.0 1.676552 2.292078 0.8225616 2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] I 3-hydroxyisobutyrate dehydrogenase 1.417867 1.927053 0.6606515 1012 NAD-dependent aldehyde dehydrogenases [Energy production and conversion] C methylmalonate-semialdehyde dehydrogenase - FALSE TRUE 42 TRUE 1.127892434 7.275045e-01 0.5284322981 0.447122 2.7016095 N 0.4361812 0.8461265 12.475 0.857812997 0.80376893 0.730570129 0.9611066438 TRUE 0.5 0.9611066438 TRUE 0.9362355600 0.8461265 0.70877221 0.6124330 395019 46419 3088338 3088339 1 132 Same - - 0.0000000 0.000000000 0 -2.966384e+00 413.4 1.612238 2.217002 0.8258628 1011 Predicted hydrolase (HAD superfamily) [General function prediction only] R haloacid dehalogenase, type II 1.465518 2.034780 0.7619353 2207 AraC-type DNA-binding domain-containing proteins [Transcription] K transcriptional regulator, AraC family FALSE TRUE 41 TRUE 0.092348959 4.714646e-02 -0.0371130024 0.447122 0.7427214 U 0.2267807 0.5090082 29.335 0.437710587 0.01428743 0.259189640 0.0111572778 FALSE 0.5 0.0111572778 FALSE 0.0348279504 0.5090082 0.04430135 0.2295329 395019 46419 3088343 3088344 1 54 Same - - 0.0000000 1.421658176 0 1.421658e+00 40.0 1.518671 2.103632 0.7912518 3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] T response regulator receiver modulated diguanylate cyclase 1.405618 1.942532 0.7336476 2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms] NT response regulator receiver modulated CheB methylesterase T FALSE TRUE 40 TRUE 0.092348959 1.909333e-01 0.5491231882 0.447122 2.5164424 Y 2.3800988 0.8770380 20.605 0.623919426 0.84871647 0.427145245 0.9029803505 TRUE 0.5 0.9029803505 TRUE 0.8347359100 0.8770380 0.75275366 0.6720977 395019 46419 3088344 3088345 1 474 Same - - 0.0000000 -16.896370085 0 -1.756623e+00 NA 1.405618 1.942532 0.7336476 2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms] NT response regulator receiver modulated CheB methylesterase 1.556417 2.216588 0.9893188 - - - conserved hypothetical protein FALSE TRUE 39 TRUE 0.092348959 1.465873e-02 0.0751374972 0.447122 0.1714116 U 0.2267807 0.4783303 38.575 0.027814685 0.01428743 0.012695784 0.0004145233 FALSE 0.5 0.0004145233 FALSE 0.0006339764 0.4783303 0.02169197 0.2085446 395019 46419 3088348 3088349 1 19 Same + + 14.4503001 -0.761319859 0 4.170431e+01 NA 1.373635 1.890346 0.6933151 3817 Predicted membrane protein [Function unknown] S protein of unknown function DUF979 1.470367 2.049110 0.7382802 - - - conserved hypothetical protein TRUE TRUE 39 TRUE 2.469373661 2.203990e+00 -0.0173423779 0.447122 0.1714116 U 0.2267807 0.7733751 14.495 0.830895618 0.68380370 0.688316838 0.9139852512 TRUE 0.5 0.9139852512 TRUE 0.8789719706 0.7733751 0.59646151 0.4951203 395019 46419 3088353 3088354 1 408 Same + + 1.9459101 -6.501548687 0 -4.239491e+00 413.4 1.531130 2.139500 0.7545054 2223 Nitrate/nitrite transporter [Inorganic ion transport and metabolism] P major facilitator superfamily MFS_1 1.489123 1.999166 0.7025705 665 Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] E FAD dependent oxidoreductase - TRUE TRUE 40 TRUE 0.297058616 6.092754e-02 0.0317166899 0.447122 0.7427214 N 0.4361812 0.5710242 38.070 0.036705816 0.18937934 0.016837770 0.0088235200 FALSE 0.5 0.0088235200 FALSE 0.0094126218 0.5710242 0.19959574 0.2766867 395019 46419 3088354 3088355 1 192 Same + + 0.0000000 -1.040675345 0 -1.934905e-01 413.4 1.489123 1.999166 0.7025705 665 Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] E FAD dependent oxidoreductase 1.535246 2.159856 0.7613340 1113 Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] E amino acid permease-associated region E TRUE TRUE 41 TRUE 0.092348959 -3.250797e-02 -0.0141930869 0.447122 0.7427214 Y 2.3800988 0.7382258 32.965 0.259675584 0.61737186 0.136180654 0.3614104894 FALSE 0.5 0.3614104894 FALSE 0.2893888114 0.7382258 0.53725610 0.4476377 395019 46419 3088355 3088356 1 52 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.535246 2.159856 0.7613340 1113 Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] E amino acid permease-associated region 7.737816 10.622259 1.1974318 - - - conserved hypothetical protein TRUE TRUE 42 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 20.255 0.634716336 0.01428743 0.438507390 0.0245669240 FALSE 0.5 0.0245669240 FALSE 0.0370983681 0.4609152 0.02169197 0.1972381 395019 46419 3088356 3088357 1 -2956 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 7.737816 10.622259 1.1974318 - - - conserved hypothetical protein 1.489994 1.992774 0.6633509 243 Anaerobic dehydrogenases, typically selenocysteine-containing [Energy production and conversion] C molybdopterin oxidoreductase TRUE TRUE 43 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 0.020 0.044747132 0.01428743 0.020619669 0.0006785095 FALSE 0.5 0.0006785095 FALSE 0.0010375749 0.4609152 0.02169197 0.1972381 395019 46419 3088357 3088358 1 17 Same + + 16.8121549 9.956852417 0 5.696340e+01 413.4 1.489994 1.992774 0.6633509 243 Anaerobic dehydrogenases, typically selenocysteine-containing [Energy production and conversion] C molybdopterin oxidoreductase 1.458630 1.955347 0.7277114 437 Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion] C 4Fe-4S ferredoxin, iron-sulfur binding domain protein C TRUE TRUE 44 TRUE 2.660124489 2.399951e+00 2.0561527494 0.447122 0.7427214 Y 2.3800988 0.9770487 13.955 0.839807507 0.97465282 0.702048258 0.9950637965 TRUE 0.5 0.9950637965 TRUE 0.9751061491 0.9770487 0.88196061 0.9244341 395019 46419 3088358 3088359 1 67 Same + + 14.5569873 8.543373794 0 5.293831e+01 413.4 1.458630 1.955347 0.7277114 437 Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion] C 4Fe-4S ferredoxin, iron-sulfur binding domain protein 1.597333 2.224505 0.7708894 3302 DMSO reductase anchor subunit [General function prediction only] R DMSO reductase anchor subunit (DmsC) TRUE TRUE 45 TRUE 2.481675849 2.351507e+00 1.9019546409 0.447122 0.7427214 U 0.2267807 0.9289392 22.510 0.575195220 0.91745658 0.378329160 0.9376936893 TRUE 0.5 0.9376936893 TRUE 0.8622467505 0.9289392 0.82215224 0.7897666 395019 46419 3088361 3088362 1 -108 Same + + 21.3832329 4.544673186 0 1.366427e+02 413.4 1.498295 2.054213 0.7027176 714 MoxR-like ATPases [General function prediction only] R Cobaltochelatase 1.806598 2.516884 0.8281219 - - - Cobaltochelatase TRUE TRUE 46 TRUE 2.920586131 2.810786e+00 1.1143001588 0.447122 0.7427214 U 0.2267807 0.9133926 1.995 0.244148274 0.89768562 0.126773225 0.7391779177 TRUE 0.5 0.7391779177 TRUE 0.5666682960 0.9133926 0.80192036 0.7519041 395019 46419 3088363 3088364 1 -3 Same - - 1.5260563 2.882729214 0 7.760049e+00 NA 1.485916 2.084388 0.7727909 - - - protein of unknown function DUF81 1.765373 2.455349 0.8329246 280 Phosphotransacetylase [Energy production and conversion] C phosphate acetyltransferase FALSE TRUE 46 TRUE 0.071018923 1.126043e+00 0.8375391651 0.447122 0.1714116 U 0.2267807 0.5959025 6.530 0.827310285 0.26827094 0.682862366 0.6372089356 TRUE 0.5 0.6372089356 TRUE 0.6232781507 0.5959025 0.25669886 0.2976389 395019 46419 3088364 3088365 1 -52 Same - - 2.7080502 2.469166895 0 7.417601e+00 413.4 1.765373 2.455349 0.8329246 280 Phosphotransacetylase [Energy production and conversion] C phosphate acetyltransferase 1.332125 1.780230 0.6153899 28 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] EH thiamine pyrophosphate enzyme domain protein TPP-binding - FALSE TRUE 45 TRUE 0.588321078 1.100941e+00 0.7676864426 0.447122 0.7427214 N 0.4361812 0.7140081 2.640 0.353189254 0.56779487 0.197059386 0.4177079075 FALSE 0.5 0.4177079075 FALSE 0.3480674116 0.7140081 0.49437641 0.4177403 395019 46419 3088365 3088366 1 137 Same - - 2.7080502 -5.477335578 0 -6.941287e+00 413.4 1.332125 1.780230 0.6153899 28 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] EH thiamine pyrophosphate enzyme domain protein TPP-binding 1.604132 2.171687 0.8177676 - - - protein of unknown function DUF1486 FALSE TRUE 44 TRUE 0.588321078 8.978645e-02 0.0282928261 0.447122 0.7427214 U 0.2267807 0.5862556 29.690 0.427777904 0.23847449 0.251496093 0.1896963555 FALSE 0.5 0.1896963555 FALSE 0.1866594642 0.5862556 0.23488306 0.2893630 395019 46419 3088366 3088367 1 185 Same - - 3.2188758 -3.620072865 0 -4.227526e+00 413.4 1.604132 2.171687 0.8177676 - - - protein of unknown function DUF1486 1.477010 2.001173 0.6806612 1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism] KE transcriptional regulator, GntR family FALSE TRUE 43 TRUE 0.767894265 6.037578e-02 0.0156992344 0.447122 0.7427214 U 0.2267807 0.6079524 32.565 0.284267818 0.30416135 0.151470347 0.1479275756 FALSE 0.5 0.1479275756 FALSE 0.1357430263 0.6079524 0.28338805 0.3082584 395019 46419 3088368 3088369 1 28 Same + + 0.0000000 0.104333596 0 1.043336e-01 413.4 1.814834 2.604668 0.9751420 - - - conserved hypothetical protein 1.418028 1.943865 0.6729443 1012 NAD-dependent aldehyde dehydrogenases [Energy production and conversion] C aldehyde dehydrogenase TRUE TRUE 43 TRUE 0.092348959 -5.267904e-02 0.0718024715 0.447122 0.7427214 U 0.2267807 0.5244742 16.375 0.781940023 0.02166114 0.617105847 0.0735545210 FALSE 0.5 0.0735545210 FALSE 0.2496053880 0.5244742 0.08488705 0.2406695 395019 46419 3088371 3088372 1 1388 Same + + 0.0000000 -18.751386457 0 -1.875139e+01 NA 1.491309 2.064799 0.7171413 - - - putative CheA signal transduction histidine kinases 1.436901 1.980335 0.6816668 - - - conserved hypothetical protein TRUE TRUE 44 TRUE 0.092348959 1.503707e-01 0.0817341965 0.447122 0.1714116 U 0.2267807 0.4803082 40.180 0.010499555 0.01428743 0.004746484 0.0001537772 FALSE 0.5 0.0001537772 FALSE 0.0002352210 0.4803082 0.02169197 0.2098557 395019 46419 3088372 3088373 1 31 Same + + 0.0000000 1.638698129 0 1.638698e+00 NA 1.436901 1.980335 0.6816668 - - - conserved hypothetical protein 1.420677 1.988443 0.8554680 784 FOG: CheY-like receiver [Signal transduction mechanisms] T response regulator receiver protein TRUE TRUE 45 TRUE 0.092348959 2.221627e-01 0.6080974912 0.447122 0.1714116 U 0.2267807 0.5589358 17.015 0.757504455 0.14851062 0.584025372 0.3526788932 FALSE 0.5 0.3526788932 FALSE 0.3915697891 0.5589358 0.17082883 0.2669518 395019 46419 3088373 3088374 1 79 Same + + 0.0000000 -14.028896739 0 -1.408154e+01 413.4 1.420677 1.988443 0.8554680 784 FOG: CheY-like receiver [Signal transduction mechanisms] T response regulator receiver protein 1.528884 2.133699 0.7958099 1024 Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] I Enoyl-CoA hydratase/isomerase - TRUE TRUE 46 TRUE 0.092348959 1.279812e-01 0.0626618059 0.447122 0.7427214 N 0.4361812 0.5483650 23.950 0.548436296 0.11129578 0.353115801 0.1320196339 FALSE 0.5 0.1320196339 FALSE 0.1709080543 0.5483650 0.14510016 0.2586646 395019 46419 3088375 3088376 1 -318 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 6.704074 9.034187 1.2417036 - - - conserved hypothetical protein 1.446830 1.990109 0.7231390 787 Alanine racemase [Cell envelope biogenesis, outer membrane] M alanine racemase FALSE TRUE 46 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 1.310 0.148200651 0.01428743 0.072526661 0.0025154914 FALSE 0.5 0.0025154914 FALSE 0.0038429442 0.4609152 0.02169197 0.1972381 395019 46419 3088377 3088378 1 325 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.402378 1.935318 0.8090689 3686 Predicted membrane protein [Function unknown] S membrane protein-like 2.082180 2.840702 0.9313872 - - - ABC transporter related TRUE TRUE 46 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 36.960 0.064017496 0.01428743 0.029823936 0.0009903860 FALSE 0.5 0.0009903860 FALSE 0.0015142455 0.4609152 0.02169197 0.1972381 395019 46419 3088378 3088379 1 19 Same + + 0.0000000 0.000000000 0 0.000000e+00 413.4 2.082180 2.840702 0.9313872 - - - ABC transporter related 1.534174 2.093400 0.7512521 - - - peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase TRUE TRUE 47 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.7427214 U 0.2267807 0.5080040 14.495 0.830895618 0.01428743 0.688316838 0.0664840156 FALSE 0.5 0.0664840156 FALSE 0.1758582881 0.5080040 0.04162046 0.2288231 395019 46419 3088379 3088380 1 15 Same + + 0.0000000 3.474846434 0 3.474846e+00 413.4 1.534174 2.093400 0.7512521 - - - peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 1.514140 2.077262 0.7485754 161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism] H aminotransferase class-III TRUE TRUE 48 TRUE 0.092348959 4.771481e-01 0.9300648924 0.447122 0.7427214 U 0.2267807 0.6513129 13.455 0.847017855 0.42232250 0.713342724 0.8018907972 TRUE 0.5 0.8018907972 TRUE 0.7683064803 0.6513129 0.37457783 0.3492876 395019 46419 3088380 3088381 1 65 Same + + 0.0000000 5.886349774 0 5.409825e+00 413.4 1.514140 2.077262 0.7485754 161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism] H aminotransferase class-III 1.835841 2.534720 0.8545242 - - - Carboxymuconolactone decarboxylase TRUE TRUE 49 TRUE 0.092348959 7.993860e-01 1.4343274899 0.447122 0.7427214 U 0.2267807 0.7180231 22.300 0.580425254 0.57624548 0.383384659 0.6529198796 TRUE 0.5 0.6529198796 TRUE 0.5819916028 0.7180231 0.50160878 0.4225508 395019 46419 3088381 3088382 1 126 Same + + 0.0000000 -11.235385339 0 -1.157419e+01 413.4 1.835841 2.534720 0.8545242 - - - Carboxymuconolactone decarboxylase 1.694346 2.249521 0.7503796 3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases [Posttranslational modification, protein turnover, chaperones] O Aspartyl/Asparaginyl beta-hydroxylase TRUE TRUE 50 TRUE 0.092348959 1.163159e-01 0.0507080719 0.447122 0.7427214 U 0.2267807 0.5225811 28.850 0.448560924 0.01428743 0.267721672 0.0116529862 FALSE 0.5 0.0116529862 FALSE 0.0660514761 0.5225811 0.07998874 0.2392853 395019 46419 3088382 3088383 1 124 Same + + 0.0000000 0.572543093 0 5.725431e-01 NA 1.694346 2.249521 0.7503796 3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases [Posttranslational modification, protein turnover, chaperones] O Aspartyl/Asparaginyl beta-hydroxylase 2.299515 3.206623 0.9939951 - - - conserved hypothetical protein TRUE TRUE 51 TRUE 0.092348959 1.955245e-02 0.2719150117 0.447122 0.1714116 U 0.2267807 0.5076557 28.700 0.451626568 0.01428743 0.270156884 0.0117965046 FALSE 0.5 0.0117965046 FALSE 0.0337530335 0.5076557 0.04068936 0.2285772 395019 46419 3088384 3088385 1 119 Same - - 44.0591115 17.667552267 0 3.733947e+02 NA 1.334305 1.843567 0.6379499 3634 Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] O FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1.271661 1.687920 0.6881752 450 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] O alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen O FALSE TRUE 51 TRUE 3.572389102 3.319007e+00 2.4804676671 0.447122 0.1714116 Y 2.3800988 0.9871702 28.300 0.459980917 0.98597612 0.276849085 0.9835759949 TRUE 0.5 0.9835759949 TRUE 0.8778456863 0.9871702 0.89403207 0.9567308 395019 46419 3088387 3088388 1 161 Same - - 0.0000000 0.097257154 0 9.725715e-02 NA 1.750410 2.434147 0.8081200 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family 3.138564 4.459956 0.9859375 - - - conserved hypothetical protein FALSE TRUE 50 TRUE 0.092348959 -6.522618e-02 0.0459175464 0.447122 0.1714116 U 0.2267807 0.4734024 31.340 0.352632542 0.01428743 0.196673943 0.0078335736 FALSE 0.5 0.0078335736 FALSE 0.0119338616 0.4734024 0.02169197 0.2053023 395019 46419 3088389 3088390 1 316 Same + + 1.4490953 0.584503368 0 2.033599e+00 NA 1.494982 1.988517 0.7071312 683 ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] E Extracellular ligand-binding receptor 1.418662 1.916040 0.7393644 - - - conserved hypothetical protein TRUE TRUE 50 TRUE -0.003423999 2.719818e-01 0.2823006394 0.447122 0.1714116 U 0.2267807 0.4979178 36.750 0.070534310 0.01428743 0.032982593 0.0010987364 FALSE 0.5 0.0010987364 FALSE 0.0016798108 0.4979178 0.02169197 0.2217812 395019 46419 3088390 3088391 1 -7 Same + + 0.0000000 0.584503368 0 5.845034e-01 NA 1.418662 1.916040 0.7393644 - - - conserved hypothetical protein 1.511445 2.092048 0.7419974 624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] E amidase, hydantoinase/carbamoylase family TRUE TRUE 51 TRUE 0.092348959 2.418842e-02 0.2823006394 0.447122 0.1714116 U 0.2267807 0.5092359 4.290 0.624990617 0.01428743 0.428263312 0.0235867925 FALSE 0.5 0.0235867925 FALSE 0.0726689544 0.5092359 0.04490842 0.2296941 395019 46419 3088394 3088395 1 -3 Same - - 0.0000000 0.676876689 0 6.768767e-01 NA 1.448351 1.961424 0.7141067 - - - conserved hypothetical protein 1.490798 2.076308 0.7128564 449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] M glucosamine--fructose-6-phosphate aminotransferase, isomerizing FALSE TRUE 51 TRUE 0.092348959 4.493631e-02 0.3215370337 0.447122 0.1714116 U 0.2267807 0.5152280 6.530 0.827310285 0.01428743 0.682862366 0.0649306360 FALSE 0.5 0.0649306360 FALSE 0.2366556870 0.5152280 0.06078015 0.2339649 395019 46419 3088395 3088396 1 91 Same - - 0.0000000 0.751958845 0 7.519588e-01 NA 1.490798 2.076308 0.7128564 449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] M glucosamine--fructose-6-phosphate aminotransferase, isomerizing 1.954250 2.681948 0.8993237 - - - conserved hypothetical protein FALSE TRUE 50 TRUE 0.092348959 6.232235e-02 0.3495579988 0.447122 0.1714116 U 0.2267807 0.5195235 25.395 0.524652520 0.01428743 0.331582614 0.0157460494 FALSE 0.5 0.0157460494 FALSE 0.0789193394 0.5195235 0.07203704 0.2370623 395019 46419 3088396 3088397 1 -22 Same - - 0.0000000 0.751958845 0 7.519588e-01 NA 1.954250 2.681948 0.8993237 - - - conserved hypothetical protein 1.542990 2.109627 0.7239960 1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] M glycosyl transferase, family 2 FALSE TRUE 49 TRUE 0.092348959 6.232235e-02 0.3495579988 0.447122 0.1714116 U 0.2267807 0.5195235 3.230 0.457557741 0.01428743 0.274899542 0.0120786567 FALSE 0.5 0.0120786567 FALSE 0.0614570558 0.5195235 0.07203704 0.2370623 395019 46419 3088397 3088398 1 -3 Same - - 18.2138291 5.592198962 0 8.396715e+01 NA 1.542990 2.109627 0.7239960 1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] M glycosyl transferase, family 2 1.625693 2.196202 0.7501063 726 Predicted xylanase/chitin deacetylase [Carbohydrate transport and metabolism] G polysaccharide deacetylase - FALSE TRUE 48 TRUE 2.746715742 2.564971e+00 1.3710154660 0.447122 0.1714116 N 0.4361812 0.9099936 6.530 0.827310285 0.89327297 0.682862366 0.9756673141 TRUE 0.5 0.9756673141 TRUE 0.9496465987 0.9099936 0.79743514 0.7439439 395019 46419 3088398 3088399 1 16 Same - - 5.5591924 5.496262020 0 5.904690e+01 413.4 1.625693 2.196202 0.7501063 726 Predicted xylanase/chitin deacetylase [Carbohydrate transport and metabolism] G polysaccharide deacetylase 1.622496 2.198420 0.7422339 - - - conserved hypothetical protein FALSE TRUE 47 TRUE 1.375529268 2.421640e+00 1.3526932169 0.447122 0.7427214 U 0.2267807 0.8372892 13.695 0.843689903 0.79030874 0.708108931 0.9531459515 TRUE 0.5 0.9531459515 TRUE 0.9250732423 0.8372892 0.69580884 0.5965733 395019 46419 3088399 3088400 1 105 Same - - 0.0000000 0.580939746 0 5.809397e-01 413.4 1.622496 2.198420 0.7422339 - - - conserved hypothetical protein 2.198724 3.049817 0.9622600 - - - conserved hypothetical protein FALSE TRUE 46 TRUE 0.092348959 2.265457e-02 0.2780162661 0.447122 0.7427214 U 0.2267807 0.5555271 26.980 0.494179696 0.13666493 0.305125479 0.1339410712 FALSE 0.5 0.1339410712 FALSE 0.1594464479 0.5555271 0.16259161 0.2642569 395019 46419 3088400 3088401 1 81 Same - - 0.0000000 0.676876689 0 6.768767e-01 NA 2.198724 3.049817 0.9622600 - - - conserved hypothetical protein 1.918731 2.632925 0.8997208 - - - conserved hypothetical protein FALSE TRUE 45 TRUE 0.092348959 4.493631e-02 0.3215370337 0.447122 0.1714116 U 0.2267807 0.5152280 24.170 0.545793754 0.01428743 0.350683506 0.0171190730 FALSE 0.5 0.0171190730 FALSE 0.0721517597 0.5152280 0.06078015 0.2339649 395019 46419 3088402 3088403 1 443 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 3.792386 5.152496 1.1091493 - - - hypothetical protein 2.420026 3.314222 0.9551107 3188 P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion] NU fimbrial biogenesis outer membrane usher protein TRUE TRUE 45 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 38.290 0.032587310 0.01428743 0.014914006 0.0004880099 FALSE 0.5 0.0004880099 FALSE 0.0007463387 0.4609152 0.02169197 0.1972381 395019 46419 3088403 3088404 1 9 Same + + 0.0000000 0.075082156 0 7.508216e-02 NA 2.420026 3.314222 0.9551107 3188 P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion] NU fimbrial biogenesis outer membrane usher protein 2.720546 3.784471 1.0160933 - - - hypothetical protein TRUE TRUE 46 TRUE 0.092348959 -9.219033e-02 -0.0039078196 0.447122 0.1714116 U 0.2267807 0.4658124 11.570 0.867977387 0.01428743 0.747149430 0.0870028331 FALSE 0.5 0.0870028331 FALSE 0.1272284219 0.4658124 0.02169197 0.2003751 395019 46419 3088404 3088405 1 43 Same + + 0.0000000 0.075082156 0 7.508216e-02 NA 2.720546 3.784471 1.0160933 - - - hypothetical protein 2.229785 3.073093 0.9244772 3121 P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion] NU pili assembly chaperone TRUE TRUE 47 TRUE 0.092348959 -9.219033e-02 -0.0039078196 0.447122 0.1714116 U 0.2267807 0.4658124 18.945 0.688128613 0.01428743 0.497914751 0.0309903212 FALSE 0.5 0.0309903212 FALSE 0.0466416307 0.4658124 0.02169197 0.2003751 395019 46419 3088405 3088406 1 152 Same + + 1.6397433 0.362057833 0 7.678453e+00 NA 2.229785 3.073093 0.9244772 3121 P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion] NU pili assembly chaperone 1.848775 2.480856 0.8272294 - - - hypothetical protein TRUE TRUE 48 TRUE 0.183918378 1.117231e+00 0.1676482082 0.447122 0.1714116 U 0.2267807 0.5127729 30.820 0.378723170 0.01428743 0.215058828 0.0087583069 FALSE 0.5 0.0087583069 FALSE 0.0338182118 0.5127729 0.05430102 0.2322081 395019 46419 3088406 3088407 1 449 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.848775 2.480856 0.8272294 - - - hypothetical protein 1.893386 2.703895 1.0133420 - - - conserved hypothetical protein TRUE TRUE 49 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 38.335 0.031792495 0.01428743 0.014543769 0.0004757222 FALSE 0.5 0.0004757222 FALSE 0.0007275512 0.4609152 0.02169197 0.1972381 395019 46419 3088408 3088409 1 201 Same - - 0.0000000 -19.310247281 0 -1.974111e+01 413.4 1.759182 2.393995 0.8225832 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] R proline iminopeptidase 1.576432 2.207563 0.8031394 75 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism] E aminotransferase, class V FALSE TRUE 49 TRUE 0.092348959 1.553178e-01 0.0842771412 0.447122 0.7427214 U 0.2267807 0.5278537 33.350 0.236096377 0.03483317 0.121967665 0.0110312311 FALSE 0.5 0.0110312311 FALSE 0.0309230702 0.5278537 0.09358391 0.2431554 395019 46419 3088409 3088410 1 0 Same - - 4.9076001 7.175613224 0 1.042113e+01 413.4 1.576432 2.207563 0.8031394 75 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism] E aminotransferase, class V 1.574779 2.182020 0.7918688 4032 Predicted thiamine-pyrophosphate-binding protein [General function prediction only] R thiamine pyrophosphate enzyme domain protein TPP-binding FALSE TRUE 48 TRUE 1.215141719 1.334071e+00 1.7483672652 0.447122 0.7427214 U 0.2267807 0.8524341 8.905 0.875024512 0.81320524 0.758854277 0.9682349257 TRUE 0.5 0.9682349257 TRUE 0.9468632261 0.8524341 0.71791670 0.6240638 395019 46419 3088410 3088411 1 -3 Same - - 3.1964841 7.250695380 0 1.161033e+01 413.4 1.574779 2.182020 0.7918688 4032 Predicted thiamine-pyrophosphate-binding protein [General function prediction only] R thiamine pyrophosphate enzyme domain protein TPP-binding 1.363988 1.877887 0.6506869 2513 PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism] G phosphoenolpyruvate phosphomutase FALSE TRUE 47 TRUE 0.760170523 1.401267e+00 1.7589101568 0.447122 0.7427214 U 0.2267807 0.8194064 6.530 0.827310285 0.76218335 0.682862366 0.9388525633 TRUE 0.5 0.9388525633 TRUE 0.9064002697 0.8194064 0.66902312 0.5659494 395019 46419 3088413 3088414 1 44 Same - - 2.7725887 7.250695380 0 7.279386e+00 NA 1.518038 2.129780 0.7744993 1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] M sugar nucleotidyltransferases-like 1.457939 2.049250 0.7264190 - - - conserved hypothetical protein FALSE TRUE 46 TRUE 0.626205559 1.088479e+00 1.7589101568 0.447122 0.1714116 U 0.2267807 0.7757217 19.140 0.679563624 0.68802436 0.488012598 0.8238519898 TRUE 0.5 0.8238519898 TRUE 0.7610514040 0.7757217 0.60029282 0.4984797 395019 46419 3088414 3088415 1 -3 Same - - 1.1631508 5.391831674 0 6.554982e+00 NA 1.457939 2.049250 0.7264190 - - - conserved hypothetical protein 1.586813 2.117523 0.7563602 - - - 2OG-Fe(II) oxygenase FALSE TRUE 45 TRUE -0.100663211 1.023399e+00 1.3357136956 0.447122 0.1714116 U 0.2267807 0.6428840 6.530 0.827310285 0.40060095 0.682862366 0.7620082936 TRUE 0.5 0.7620082936 TRUE 0.7271286239 0.6428840 0.35741982 0.3409454 395019 46419 3088415 3088416 1 -3 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.586813 2.117523 0.7563602 - - - 2OG-Fe(II) oxygenase 1.642429 2.299170 0.8692694 - - - CDP-alcohol phosphatidyltransferase FALSE TRUE 44 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 6.530 0.827310285 0.01428743 0.682862366 0.0649306360 FALSE 0.5 0.0649306360 FALSE 0.0960245029 0.4609152 0.02169197 0.1972381 395019 46419 3088422 3088423 1 149 Same - - 0.0000000 0.751958845 0 7.519588e-01 413.4 1.688869 2.364318 0.8253516 - - - Helix-hairpin-helix DNA-binding, class 1 1.676105 2.347963 0.8287293 568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] K RNA polymerase, sigma 70 subunit, RpoD family FALSE TRUE 43 TRUE 0.092348959 6.232235e-02 0.3495579988 0.447122 0.7427214 U 0.2267807 0.5663099 30.655 0.386756222 0.17364891 0.220854468 0.1170205677 FALSE 0.5 0.1170205677 FALSE 0.1277475555 0.5663099 0.18845894 0.2728569 395019 46419 3088424 3088425 1 28 Same + + 0.0000000 0.659585525 0 6.595855e-01 NA 2.485011 3.372167 1.0298729 - - - conserved hypothetical protein 2.334946 3.045063 0.8857439 4991 Uncharacterized protein with a bacterial SH3 domain homologue [Function unknown] S SH3, type 3 domain protein TRUE TRUE 43 TRUE 0.092348959 3.895127e-02 0.3109766197 0.447122 0.1714116 U 0.2267807 0.5136126 16.375 0.781940023 0.01428743 0.617105847 0.0494078096 FALSE 0.5 0.0494078096 FALSE 0.1768327774 0.5136126 0.05652095 0.2328079 395019 46419 3088425 3088426 1 245 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.334946 3.045063 0.8857439 4991 Uncharacterized protein with a bacterial SH3 domain homologue [Function unknown] S SH3, type 3 domain protein 3.871260 5.327155 1.0491481 2963 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L HMG-I and HMG-Y, DNA-binding domain protein TRUE TRUE 44 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 34.925 0.146930740 0.01428743 0.071850494 0.0024902869 FALSE 0.5 0.0024902869 FALSE 0.0038044897 0.4609152 0.02169197 0.1972381 395019 46419 3088426 3088427 1 90 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 3.871260 5.327155 1.0491481 2963 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L HMG-I and HMG-Y, DNA-binding domain protein 3.661033 4.927011 1.0159883 2801 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L Integrase, catalytic region L TRUE TRUE 45 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 Y 2.3800988 0.6969391 25.235 0.528336995 0.53078239 0.334866383 0.5589138222 TRUE 0.5 0.5589138222 TRUE 0.4913635367 0.6969391 0.46306270 0.3979000 395019 46419 3088428 3088429 1 62 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.772574 2.416898 0.8601887 - - - conserved hypothetical protein 1.872162 2.502507 0.9606647 - - - hypothetical protein FALSE TRUE 45 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 21.840 0.591626307 0.01428743 0.394357173 0.0205668786 FALSE 0.5 0.0205668786 FALSE 0.0311230258 0.4609152 0.02169197 0.1972381 395019 46419 3088429 3088430 1 1 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.872162 2.502507 0.9606647 - - - hypothetical protein 2.488520 3.435985 0.9844011 - - - hypothetical protein FALSE TRUE 44 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 9.365 0.876338155 0.01428743 0.761055565 0.0931485365 FALSE 0.5 0.0931485365 FALSE 0.1357929607 0.4609152 0.02169197 0.1972381 395019 46419 3088430 3088431 1 245 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.488520 3.435985 0.9844011 - - - hypothetical protein 1.337530 1.819415 0.6288493 129 Dihydroxyacid dehydratase/phosphogluconate dehydratase [Amino acid transport and metabolism / Carbohydrate transport and metabolism] EG dihydroxy-acid dehydratase FALSE TRUE 43 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 34.925 0.146930740 0.01428743 0.071850494 0.0024902869 FALSE 0.5 0.0024902869 FALSE 0.0038044897 0.4609152 0.02169197 0.1972381 395019 46419 3088431 3088432 1 185 Same - - 0.0000000 -11.649262804 0 -7.926494e+00 413.4 1.337530 1.819415 0.6288493 129 Dihydroxyacid dehydratase/phosphogluconate dehydratase [Amino acid transport and metabolism / Carbohydrate transport and metabolism] EG dihydroxy-acid dehydratase 1.445827 1.978183 0.6891397 2055 Malate/L-lactate dehydrogenases [Energy production and conversion] C Malate/L-lactate dehydrogenase - FALSE TRUE 42 TRUE 0.092348959 9.646902e-02 0.0528280427 0.447122 0.7427214 N 0.4361812 0.5466839 32.565 0.284267818 0.10524495 0.151470347 0.0446318633 FALSE 0.5 0.0446318633 FALSE 0.0611833987 0.5466839 0.14095810 0.2573656 395019 46419 3088432 3088433 1 -7 Same - - 1.4916549 5.004404964 0 5.583946e+00 413.4 1.445827 1.978183 0.6891397 2055 Malate/L-lactate dehydrogenases [Energy production and conversion] C Malate/L-lactate dehydrogenase 1.484883 2.051195 0.7236491 1012 NAD-dependent aldehyde dehydrogenases [Energy production and conversion] C aldehyde dehydrogenase C FALSE TRUE 41 TRUE 0.034813204 8.245709e-01 1.2241112836 0.447122 0.7427214 Y 2.3800988 0.8542137 4.290 0.624990617 0.81584243 0.428263312 0.8807146447 TRUE 0.5 0.8807146447 TRUE 0.8111703776 0.8542137 0.72048072 0.6273937 395019 46419 3088433 3088434 1 71 Same - - 1.5515439 4.987113801 0 4.901857e+00 413.4 1.484883 2.051195 0.7236491 1012 NAD-dependent aldehyde dehydrogenases [Energy production and conversion] C aldehyde dehydrogenase 1.414974 1.933038 0.6856977 531 Amino acid transporters [Amino acid transport and metabolism] E amino acid permease-associated region - FALSE TRUE 40 TRUE 0.100883806 6.959704e-01 1.2200769370 0.447122 0.7427214 N 0.4361812 0.7119578 22.975 0.563641539 0.56344272 0.367310671 0.6250644191 TRUE 0.5 0.6250644191 TRUE 0.5544347005 0.7119578 0.49066379 0.4153053 395019 46419 3088435 3088436 1 -789 Same + + 0.0000000 0.095936943 0 9.593694e-02 413.4 1.384163 1.897922 0.7049588 3938 Proline racemase [Amino acid transport and metabolism] E proline racemase 3.332452 4.611162 1.1091227 665 Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] E FAD dependent oxidoreductase E TRUE TRUE 40 TRUE 0.092348959 -7.928465e-02 0.0203611235 0.447122 0.7427214 Y 2.3800988 0.7419202 0.840 0.099177508 0.62465032 0.047150027 0.1548492417 FALSE 0.5 0.1548492417 FALSE 0.1159477393 0.7419202 0.54364374 0.4523911 395019 46419 3088436 3088437 1 -3 Same + + 0.0000000 0.095936943 0 9.593694e-02 371.0 3.332452 4.611162 1.1091227 665 Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] E FAD dependent oxidoreductase 1.631503 2.215103 0.8951858 - - - ferredoxin TRUE TRUE 41 TRUE 0.092348959 -7.928465e-02 0.0203611235 0.447122 1.3442439 U 0.2267807 0.5659154 6.530 0.827310285 0.17232045 0.682862366 0.4993532820 FALSE 0.5 0.4993532820 FALSE 0.5251017682 0.5659154 0.18752213 0.2725383 395019 46419 3088437 3088438 1 -3 Same + + 1.5755364 3.752834262 0 1.100645e+01 413.4 1.631503 2.215103 0.8951858 - - - ferredoxin 1.794472 2.484160 0.8239803 446 Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] R FAD-dependent pyridine nucleotide-disulphide oxidoreductase TRUE TRUE 42 TRUE 0.142472821 1.369542e+00 0.9769478279 0.447122 0.7427214 U 0.2267807 0.6696346 6.530 0.827310285 0.46765147 0.682862366 0.8080064550 TRUE 0.5 0.8080064550 TRUE 0.7697260045 0.6696346 0.41097926 0.3680818 395019 46419 3088440 3088441 1 110 Same + + 5.7622002 2.096222287 0 2.815108e+01 413.4 1.455366 1.998527 0.7074336 3435 Gentisate 1,2-dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q gentisate 1,2-dioxygenase 1.538353 2.136198 0.7784581 179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Q fumarylacetoacetate (FAA) hydrolase Q TRUE TRUE 43 TRUE 1.430720421 1.973988e+00 0.6896668250 0.447122 0.7427214 Y 2.3800988 0.9046324 27.490 0.481784900 0.88624564 0.294709722 0.8786875648 TRUE 0.5 0.8786875648 TRUE 0.7779797122 0.9046324 0.79031486 0.7316092 395019 46419 3088441 3088442 1 497 Same + + 2.6250269 -11.506097763 0 8.912656e+00 413.4 1.538353 2.136198 0.7784581 179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Q fumarylacetoacetate (FAA) hydrolase 1.756171 2.402724 0.7619519 654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] HC monooxygenase, FAD-binding - TRUE TRUE 44 TRUE 0.557252837 1.213156e+00 0.0515007655 0.447122 0.7427214 N 0.4361812 0.6164652 38.765 0.024963757 0.32867072 0.011376368 0.0123795452 FALSE 0.5 0.0123795452 FALSE 0.0109498376 0.6164652 0.30187801 0.3159567 395019 46419 3088442 3088443 1 60 Same + + 1.5656353 1.458069456 0 -1.375843e+00 413.4 1.756171 2.402724 0.7619519 654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] HC monooxygenase, FAD-binding 1.817668 2.550261 0.8500390 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 - TRUE TRUE 45 TRUE 0.119134561 1.407468e-03 0.5613096033 0.447122 0.7427214 N 0.4361812 0.6229461 21.525 0.599337664 0.34688114 0.402028578 0.4427346692 FALSE 0.5 0.4427346692 FALSE 0.4083882918 0.6229461 0.31575742 0.3219302 395019 46419 3088446 3088447 1 99 Same - - 0.0000000 -26.600575183 0 -2.408045e+01 NA 2.218555 3.088933 1.0158845 - - - conserved hypothetical protein 1.858616 2.530411 0.8522534 1858 Cytochrome c peroxidase [Inorganic ion transport and metabolism] P Di-haem cytochrome c peroxidase FALSE TRUE 45 TRUE 0.092348959 1.663993e-01 0.1017826370 0.447122 0.1714116 U 0.2267807 0.4834077 26.265 0.507876938 0.01428743 0.316865243 0.0147380613 FALSE 0.5 0.0147380613 FALSE 0.0223708444 0.4834077 0.02169197 0.2119216 395019 46419 3088447 3088448 1 60 Same - - 0.0000000 -2.227172609 0 1.988780e-01 413.4 1.858616 2.530411 0.8522534 1858 Cytochrome c peroxidase [Inorganic ion transport and metabolism] P Di-haem cytochrome c peroxidase 1.655093 2.204690 0.7505688 - - - metallophosphoesterase FALSE TRUE 44 TRUE 0.092348959 -3.162340e-02 -0.0022892640 0.447122 0.7427214 U 0.2267807 0.5136119 21.525 0.599337664 0.01428743 0.402028578 0.0212217522 FALSE 0.5 0.0212217522 FALSE 0.0822399298 0.5136119 0.05651890 0.2328074 395019 46419 3088450 3088451 1 44 Same - - 0.0000000 -28.503370169 0 -2.850337e+01 NA 1.516042 2.135722 0.8888816 - - - conserved hypothetical protein 1.535667 2.135716 0.7505308 1292 Choline-glycine betaine transporter [Cell envelope biogenesis, outer membrane] M choline/carnitine/betaine transporter FALSE TRUE 43 TRUE 0.092348959 1.732978e-01 0.1060289202 0.447122 0.1714116 U 0.2267807 0.4840901 19.140 0.679563624 0.01428743 0.488012598 0.0298224562 FALSE 0.5 0.0298224562 FALSE 0.0449112854 0.4840901 0.02169197 0.2123783 395019 46419 3088452 3088453 1 -3 Same + + 0.0000000 17.502840930 0 1.746362e+01 413.4 1.765135 2.493621 0.8380479 1737 Transcriptional regulators [Transcription] K transcriptional regulator, RpiR family 1.532568 2.103437 0.7376041 1446 Asparaginase [Amino acid transport and metabolism] E peptidase T2, asparaginase 2 - TRUE TRUE 43 TRUE 0.092348959 1.650486e+00 2.4737761302 0.447122 0.7427214 N 0.4361812 0.8422574 6.530 0.827310285 0.79791056 0.682862366 0.9497872723 TRUE 0.5 0.9497872723 TRUE 0.9190028793 0.8422574 0.70311848 0.6054278 395019 46419 3088455 3088456 1 106 Same + + 2.6912431 19.482911113 0 9.077838e+01 413.4 1.504092 2.099024 0.7318556 1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] R oligopeptide/dipeptide ABC transporter, ATPase subunit 1.323986 1.779766 0.6045589 747 ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism] E extracellular solute-binding protein, family 5 TRUE TRUE 44 TRUE 0.576728285 2.600497e+00 2.5470067534 0.447122 0.7427214 U 0.2267807 0.8717352 27.075 0.492101509 0.84123227 0.303365505 0.8369665711 TRUE 0.5 0.8369665711 TRUE 0.7393118699 0.8717352 0.74535528 0.6613691 395019 46419 3088456 3088457 1 77 Same + + 17.5607207 19.482911113 0 8.762594e+01 397.0 1.323986 1.779766 0.6045589 747 ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism] E extracellular solute-binding protein, family 5 1.479966 2.066468 0.7542570 601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP binding-protein-dependent transport systems inner membrane component E TRUE TRUE 45 TRUE 2.717703836 2.579900e+00 2.5470067534 0.447122 1.0362192 Y 2.3800988 0.9848931 23.650 0.552211667 0.98344900 0.356608436 0.9865366576 TRUE 0.5 0.9865366576 TRUE 0.9100317356 0.9848931 0.89133123 0.9493288 395019 46419 3088457 3088458 1 8 Same + + 12.5954475 19.583421175 0 9.802524e+01 397.0 1.479966 2.066468 0.7542570 601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP binding-protein-dependent transport systems inner membrane component 1.526971 2.099476 0.7692592 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP binding-protein-dependent transport systems inner membrane component EP TRUE TRUE 46 TRUE 2.356939665 2.647602e+00 2.5597347522 0.447122 1.0362192 Y 2.3800988 0.9818171 11.370 0.870353690 0.98001651 0.751076838 0.9969717951 TRUE 0.5 0.9969717951 TRUE 0.9814986823 0.9818171 0.88766900 0.9394564 395019 46419 3088458 3088459 1 0 Same + + 0.0000000 15.886896362 0 1.476100e+01 NA 1.526971 2.099476 0.7692592 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism] EP binding-protein-dependent transport systems inner membrane component 1.693410 2.343320 0.8269539 3191 L-aminopeptidase/D-esterase [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism] EQ peptidase S58, DmpA E TRUE TRUE 47 TRUE 0.092348959 1.553181e+00 2.3957974129 0.447122 0.1714116 Y 2.3800988 0.9113584 8.905 0.875024512 0.89504874 0.758854277 0.9835285229 TRUE 0.5 0.9835285229 TRUE 0.9653662152 0.9113584 0.79923880 0.7471270 395019 46419 3088459 3088460 1 -3 Same + + 1.5353299 14.648320216 0 1.310990e+01 NA 1.693410 2.343320 0.8269539 3191 L-aminopeptidase/D-esterase [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism] EQ peptidase S58, DmpA 1.611897 2.256187 0.8358780 2362 D-aminopeptidase [Amino acid transport and metabolism] E peptidase M55, D-aminopeptidase E TRUE TRUE 48 TRUE 0.083544434 1.492697e+00 2.3417638325 0.447122 0.1714116 Y 2.3800988 0.9081735 6.530 0.827310285 0.89089659 0.682862366 0.9750743326 TRUE 0.5 0.9750743326 TRUE 0.9489312786 0.9081735 0.79502423 0.7397265 395019 46419 3088461 3088462 1 4 Same - - 23.9673589 12.807582124 0 1.786299e+02 2.0 1.423516 1.924139 0.7333026 3485 Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism] Q protocatechuate 3,4-dioxygenase, alpha subunit 1.402777 1.876436 0.7457821 3485 Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism] Q protocatechuate 3,4-dioxygenase, beta subunit Q FALSE TRUE 48 TRUE 3.051852675 2.928745e+00 2.2610347630 0.447122 3.7868824 Y 2.3800988 0.9939951 10.330 0.878366564 0.99348129 0.764466705 0.9990922116 TRUE 0.5 0.9990922116 TRUE 0.9851904205 0.9939951 0.90207613 0.9794105 395019 46419 3088464 3088465 1 135 Same - - 0.0000000 -19.784079541 0 -1.141992e+01 413.4 1.774970 2.523881 0.8414404 531 Amino acid transporters [Amino acid transport and metabolism] E amino acid permease-associated region 1.515037 2.128837 0.7196364 1201 Lhr-like helicases [General function prediction only] R DEAD/H associated domain protein FALSE TRUE 47 TRUE 0.092348959 1.157122e-01 0.0857536690 0.447122 0.7427214 U 0.2267807 0.5277822 29.545 0.432114573 0.03455647 0.254841563 0.0265137127 FALSE 0.5 0.0265137127 FALSE 0.0726935978 0.5277822 0.09340069 0.2431026 395019 46419 3088465 3088466 1 164 Same - - 0.0000000 -18.115756916 0 -1.811576e+01 NA 1.515037 2.128837 0.7196364 1201 Lhr-like helicases [General function prediction only] R DEAD/H associated domain protein 1.618401 2.248851 0.8417370 - - - conserved hypothetical protein FALSE TRUE 46 TRUE 0.092348959 1.483696e-01 0.0802654686 0.447122 0.1714116 U 0.2267807 0.4800752 31.530 0.342726410 0.01428743 0.189864050 0.0075012774 FALSE 0.5 0.0075012774 FALSE 0.0114296369 0.4800752 0.02169197 0.2097009 395019 46419 3088467 3088468 1 227 Same + + 0.0000000 -30.485382306 0 -3.451712e+01 NA 1.422047 1.886554 0.6361539 405 Gamma-glutamyltransferase [Amino acid transport and metabolism] E gamma-glutamyltransferase 1.583129 2.168810 0.7524804 2326 Uncharacterized conserved protein [Function unknown] S protein of unknown function DUF344 TRUE TRUE 46 TRUE 0.092348959 1.848278e-01 0.1118078687 0.447122 0.1714116 U 0.2267807 0.4850347 34.325 0.179036248 0.01428743 0.089267106 0.0031510133 FALSE 0.5 0.0031510133 FALSE 0.0048122200 0.4850347 0.02169197 0.2130116 395019 46419 3088469 3088470 1 21 Same - - 0.0000000 0.000000000 0 0.000000e+00 413.4 2.913492 4.034158 0.9759518 1739 Uncharacterized conserved protein [Function unknown] S protein of unknown function UPF0029 1.658635 2.333192 0.8161778 546 Predicted phosphatases [General function prediction only] R HAD-superfamily hydrolase, subfamily IA, variant 3 FALSE TRUE 46 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.7427214 U 0.2267807 0.5080040 14.965 0.822319504 0.01428743 0.675335249 0.0628647218 FALSE 0.5 0.0628647218 FALSE 0.1673522275 0.5080040 0.04162046 0.2288231 395019 46419 3088470 3088471 1 167 Same - - 0.0000000 -2.626478547 0 -2.017504e+00 413.4 1.658635 2.333192 0.8161778 546 Predicted phosphatases [General function prediction only] R HAD-superfamily hydrolase, subfamily IA, variant 3 1.603642 2.175857 0.7575942 1472 Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] G Beta-glucosidase FALSE TRUE 45 TRUE 0.092348959 2.114533e-02 0.0084310844 0.447122 0.7427214 U 0.2267807 0.5155950 31.665 0.335545422 0.01428743 0.184984498 0.0072664551 FALSE 0.5 0.0072664551 FALSE 0.0321644530 0.5155950 0.06174602 0.2342284 395019 46419 3088471 3088472 1 266 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.603642 2.175857 0.7575942 1472 Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] G Beta-glucosidase 3.833367 5.166579 1.1313110 - - - hypothetical protein FALSE TRUE 44 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 35.610 0.114121500 0.01428743 0.054730856 0.0018637473 FALSE 0.5 0.0018637473 FALSE 0.0028482495 0.4609152 0.02169197 0.1972381 395019 46419 3088472 3088473 1 50 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 3.833367 5.166579 1.1313110 - - - hypothetical protein 1.948317 2.654725 0.8425733 1596 Periplasmic protein involved in polysaccharide export [Cell envelope biogenesis, outer membrane] M polysaccharide export protein FALSE TRUE 43 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 19.995 0.643798796 0.01428743 0.448227373 0.0255286432 FALSE 0.5 0.0255286432 FALSE 0.0385312765 0.4609152 0.02169197 0.1972381 395019 46419 3088474 3088475 1 169 Same + + 0.0000000 -2.254958260 0 -2.254958e+00 413.4 1.930032 2.696937 0.8624220 3206 Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane] M lipopolysaccharide biosynthesis 1.704483 2.351814 0.7861480 - - - hypothetical protein TRUE TRUE 43 TRUE 0.092348959 2.664262e-02 -0.0017280899 0.447122 0.7427214 U 0.2267807 0.5141239 31.785 0.329056849 0.01428743 0.180615971 0.0070585054 FALSE 0.5 0.0070585054 FALSE 0.0292444220 0.5141239 0.05787066 0.2331737 395019 46419 3088475 3088476 1 293 Same + + 0.0000000 -2.254958260 0 -2.254958e+00 413.4 1.704483 2.351814 0.7861480 - - - hypothetical protein 2.189128 3.026161 0.8979017 1835 Predicted acyltransferases [Lipid metabolism] I acyltransferase 3 TRUE TRUE 44 TRUE 0.092348959 2.664262e-02 -0.0017280899 0.447122 0.7427214 U 0.2267807 0.5141239 36.315 0.085509808 0.01428743 0.040331249 0.0013534822 FALSE 0.5 0.0013534822 FALSE 0.0057108076 0.5141239 0.05787066 0.2331737 395019 46419 3088476 3088477 1 398 Same + + 0.0000000 -12.715950567 0 -1.271595e+01 NA 2.189128 3.026161 0.8979017 1835 Predicted acyltransferases [Lipid metabolism] I acyltransferase 3 1.921309 2.677584 0.8476072 - - - conserved hypothetical protein TRUE TRUE 45 TRUE 0.092348959 1.228177e-01 0.0579396842 0.447122 0.1714116 U 0.2267807 0.4765690 38.010 0.037897917 0.01428743 0.017396266 0.0005706242 FALSE 0.5 0.0005706242 FALSE 0.0008726468 0.4765690 0.02169197 0.2073818 395019 46419 3088477 3088478 1 395 Same + + 0.0000000 -28.977311895 0 -2.645719e+01 NA 1.921309 2.677584 0.8476072 - - - conserved hypothetical protein 1.724654 2.388120 0.8018805 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M glycosyl transferase, group 1 TRUE TRUE 46 TRUE 0.092348959 1.699476e-01 0.1077477087 0.447122 0.1714116 U 0.2267807 0.4843212 37.975 0.038607275 0.01428743 0.017728954 0.0005817273 FALSE 0.5 0.0005817273 FALSE 0.0008896214 0.4843212 0.02169197 0.2125331 395019 46419 3088478 3088479 1 38 Same + + 0.0000000 5.284926374 0 5.284926e+00 413.4 1.724654 2.388120 0.8018805 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M glycosyl transferase, group 1 1.513046 2.128791 0.7544401 2244 Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only] R polysaccharide biosynthesis protein TRUE TRUE 47 TRUE 0.092348959 7.735818e-01 1.3080710654 0.447122 0.7427214 U 0.2267807 0.7023911 18.110 0.721907425 0.54279993 0.538478003 0.7550190589 TRUE 0.5 0.7550190589 TRUE 0.6998328968 0.7023911 0.47316566 0.4041321 395019 46419 3088480 3088481 1 22 Same - - 6.5220928 -7.681637069 0 5.525067e+00 70.0 1.737568 2.353545 0.7951199 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M glycosyl transferase, group 1 1.758629 2.443555 0.8312995 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M glycosyl transferase, group 1 M FALSE TRUE 47 TRUE 1.573782546 8.157598e-01 0.0400345256 0.447122 1.9957526 Y 2.3800988 0.9106072 15.165 0.818474054 0.89407196 0.669586881 0.9743960043 TRUE 0.5 0.9743960043 TRUE 0.9469199609 0.9106072 0.79824646 0.7453728 395019 46419 3088483 3088484 1 -3 Same - - 0.0000000 4.600967052 0 4.600967e+00 NA 1.619701 2.244144 0.7812153 836 Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] M mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1.499223 2.087436 0.8166210 2153 Predicted acyltransferase [General function prediction only] R acyltransferase-like FALSE TRUE 46 TRUE 0.092348959 6.418428e-01 1.1242156628 0.447122 0.1714116 U 0.2267807 0.6356740 6.530 0.827310285 0.38156354 0.682862366 0.7472060628 TRUE 0.5 0.7472060628 TRUE 0.7139502859 0.6356740 0.34253095 0.3339551 395019 46419 3088485 3088486 1 160 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 4.433590 5.893258 1.0541613 - - - hypothetical protein 1.727421 2.380345 0.8105967 2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] T sigma54 specific transcriptional regulator, Fis family TRUE TRUE 46 TRUE 0.092348959 -8.932211e-02 -0.0371130024 0.447122 0.1714116 U 0.2267807 0.4609152 31.285 0.355459007 0.01428743 0.198633908 0.0079302171 FALSE 0.5 0.0079302171 FALSE 0.0120804749 0.4609152 0.02169197 0.1972381 395019 46419 3088487 3088488 1 -3 Same - - 6.7585921 4.729400004 0 2.045926e+01 NA 1.546210 2.157863 0.7520762 3250 Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] G Beta-mannosidase 1.490533 2.021205 0.7043762 - - - conserved hypothetical protein FALSE TRUE 46 TRUE 1.619321169 1.750586e+00 1.1531104766 0.447122 0.1714116 U 0.2267807 0.8091812 6.530 0.827310285 0.74554281 0.682862366 0.9334953034 TRUE 0.5 0.9334953034 TRUE 0.9002983434 0.8091812 0.65336431 0.5492674 395019 46419 3088488 3088489 1 -3 Same - - 0.0000000 0.285567417 0 2.855674e-01 NA 1.490533 2.021205 0.7043762 - - - conserved hypothetical protein 2.456630 3.324598 0.9431295 - - - Seryl-tRNA synthetase-like FALSE TRUE 45 TRUE 0.092348959 -2.483219e-02 0.1496862657 0.447122 0.1714116 U 0.2267807 0.4891293 6.530 0.827310285 0.01428743 0.682862366 0.0649306360 FALSE 0.5 0.0649306360 FALSE 0.0960245029 0.4891293 0.02169197 0.2157721 395019 46419 3088489 3088490 1 674 Same - - 0.0000000 -2.378631221 0 9.725715e-02 413.4 2.456630 3.324598 0.9431295 - - - Seryl-tRNA synthetase-like 1.892063 2.642531 1.0076178 - - - phosphopantetheine-binding FALSE TRUE 44 TRUE 0.092348959 -6.522618e-02 0.0027015876 0.447122 0.7427214 U 0.2267807 0.5141073 39.500 0.016127208 0.01428743 0.007313342 0.0002375314 FALSE 0.5 0.0002375314 FALSE 0.0010050385 0.5141073 0.05782689 0.2331618 395019 46419 3088490 3088491 1 170 Same - - 0.0000000 4.934270475 0 4.934270e+00 413.4 1.892063 2.642531 1.0076178 - - - phosphopantetheine-binding 1.842708 2.557788 0.8589165 664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] T transcriptional regulator, Crp/Fnr family FALSE TRUE 43 TRUE 0.092348959 7.020150e-01 1.2028657341 0.447122 0.7427214 U 0.2267807 0.6886757 31.870 0.324398481 0.51220472 0.177503089 0.3351903378 FALSE 0.5 0.3351903378 FALSE 0.2800635895 0.6886757 0.44756465 0.3886353 395019 46419 3088492 3088493 1 12 Same + + 0.0000000 4.552829611 0 4.086740e+00 413.4 1.808509 2.558149 0.8979495 664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] T putative transcriptional regulator, Crp/Fnr family 1.709696 2.365577 0.7820034 2148 Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis, outer membrane] M sugar transferase - TRUE TRUE 43 TRUE 0.092348959 5.553286e-01 1.1198033020 0.447122 0.7427214 N 0.4361812 0.6976971 12.475 0.857812997 0.53246434 0.730570129 0.8729484205 TRUE 0.5 0.8729484205 TRUE 0.8395515501 0.6976971 0.46447301 0.3987606 395019 46419 3088493 3088494 1 17 Same + + 0.0000000 0.097257154 0 9.725715e-02 NA 1.709696 2.365577 0.7820034 2148 Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis, outer membrane] M sugar transferase 2.284000 3.144728 0.9569908 1734 DnaK suppressor protein [Signal transduction mechanisms] T transcriptional regulator, TraR/DksA family - TRUE TRUE 44 TRUE 0.092348959 -6.522618e-02 0.0459175464 0.447122 0.1714116 N 0.4361812 0.4974316 13.955 0.839807507 0.01428743 0.702048258 0.0706210698 FALSE 0.5 0.0706210698 FALSE 0.1041364819 0.4974316 0.02169197 0.2214457 395019 46419 3088494 3088495 1 172 Same + + 0.0000000 0.097257154 0 9.725715e-02 NA 2.284000 3.144728 0.9569908 1734 DnaK suppressor protein [Signal transduction mechanisms] T transcriptional regulator, TraR/DksA family 1.715487 2.386892 0.8317728 1796 DNA polymerase IV (family X) [DNA replication, recombination, and repair] L PHP C-terminal domain protein - TRUE TRUE 45 TRUE 0.092348959 -6.522618e-02 0.0459175464 0.447122 0.1714116 N 0.4361812 0.4974316 31.960 0.319408328 0.01428743 0.174189990 0.0067564603 FALSE 0.5 0.0067564603 FALSE 0.0102988126 0.4974316 0.02169197 0.2214457 395019 46419 3088499 3088500 1 0 Same + + 10.2830193 6.559846223 0 6.288122e+01 NA 1.726518 2.305550 0.8154812 - - - conserved hypothetical protein 1.389390 1.849639 0.6306338 2303 Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] E glucose-methanol-choline oxidoreductase TRUE TRUE 46 TRUE 2.119300100 2.458004e+00 1.6380272134 0.447122 0.1714116 U 0.2267807 0.8837912 8.905 0.875024512 0.85811753 0.758854277 0.9769298729 TRUE 0.5 0.9769298729 TRUE 0.9573158848 0.8837912 0.76209002 0.6860775 395019 46419 3088500 3088501 1 -3 Same + + 1.5755364 5.052010837 0 2.486543e+01 371.0 1.389390 1.849639 0.6306338 2303 Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] E glucose-methanol-choline oxidoreductase 1.373799 1.863940 0.6490682 2010 Cytochrome c, mono- and diheme variants [Energy production and conversion] C cytochrome c, class I - TRUE TRUE 47 TRUE 0.142472821 1.886876e+00 1.2350968902 0.447122 1.3442439 N 0.4361812 0.7632189 6.530 0.827310285 0.66523722 0.682862366 0.9049438334 TRUE 0.5 0.9049438334 TRUE 0.8685568134 0.7632189 0.57970802 0.4808647 395019 46419 3088501 3088502 1 144 Same + + 0.0000000 0.676876689 0 -3.912926e-01 413.4 1.373799 1.863940 0.6490682 2010 Cytochrome c, mono- and diheme variants [Energy production and conversion] C cytochrome c, class I 1.479861 2.107333 0.7307683 4651 Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] P sodium/hydrogen exchanger - TRUE TRUE 48 TRUE 0.092348959 -2.367708e-02 0.3215370337 0.447122 0.7427214 N 0.4361812 0.5851145 30.275 0.404979373 0.23488499 0.234246586 0.1728316662 FALSE 0.5 0.1728316662 FALSE 0.1707577493 0.5851145 0.23227555 0.2883969 395019 46419 3088503 3088504 1 387 Same - - 0.0000000 -37.274505071 0 -1.475059e+01 NA 1.463617 1.983899 0.6813474 768 Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane] M Peptidoglycan glycosyltransferase 1.631139 2.259017 0.9015194 - - - conserved hypothetical protein FALSE TRUE 48 TRUE 0.092348959 1.325906e-01 0.1271387920 0.447122 0.1714116 U 0.2267807 0.4869317 37.905 0.040057235 0.01428743 0.018409809 0.0006044730 FALSE 0.5 0.0006044730 FALSE 0.0009243947 0.4869317 0.02169197 0.2142875 395019 46419 3088507 3088508 1 -3 Same + + 12.0510090 6.084098385 0 5.580749e+01 2.0 1.733280 2.442460 0.8527177 179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Q 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit 1.466825 2.007162 0.7579326 179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Q 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit Q TRUE TRUE 48 TRUE 2.294213736 2.380155e+00 1.4863811234 0.447122 3.7868824 Y 2.3800988 0.9854524 6.530 0.827310285 0.98407073 0.682862366 0.9966325388 TRUE 0.5 0.9966325388 TRUE 0.9753488106 0.9854524 0.89199535 0.9511392 395019 46419 3088510 3088511 1 43 Same + + 12.8184390 7.642237471 0 7.435001e+01 413.4 1.508664 2.048720 0.7140126 1012 NAD-dependent aldehyde dehydrogenases [Energy production and conversion] C 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 1.484143 2.006639 0.7370455 3384 Uncharacterized conserved protein [Function unknown] S 3,4-dihydroxyphenylacetate 2,3-dioxygenase TRUE TRUE 49 TRUE 2.378022995 2.514898e+00 1.8235925733 0.447122 0.7427214 U 0.2267807 0.9221369 18.945 0.688128613 0.90888799 0.497914751 0.9565414746 TRUE 0.5 0.9565414746 TRUE 0.9057962260 0.9221369 0.81335652 0.7728991 395019 46419 3088511 3088512 1 278 Same + + 8.9934274 -51.507700592 0 5.217905e+01 44.0 1.484143 2.006639 0.7370455 3384 Uncharacterized conserved protein [Function unknown] S 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1.926280 2.595278 0.8177768 3971 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism] Q 2-oxo-hepta-3-ene-1,7-dioic acid hydratase TRUE TRUE 50 TRUE 1.953453641 2.347939e+00 0.1480194673 0.447122 2.4314824 U 0.2267807 0.8573437 35.940 0.100056018 0.82045413 0.047592027 0.3368920959 FALSE 0.5 0.3368920959 FALSE 0.2266480778 0.8573437 0.72497329 0.6333030 395019 46419 3088514 3088515 1 116 Same + + 0.0000000 -3.146162848 0 -4.379212e+00 413.4 1.704035 2.345959 0.7832806 3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism] G 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 2.958900 4.168792 1.0246055 - - - DNA binding domain, excisionase family TRUE TRUE 51 TRUE 0.092348959 6.221541e-02 0.0122568390 0.447122 0.7427214 U 0.2267807 0.5164662 28.010 0.466834500 0.01428743 0.282400974 0.0125322116 FALSE 0.5 0.0125322116 FALSE 0.0565189580 0.5164662 0.06403531 0.2348547 395019 46419 3088517 3088518 1 79 Same + + 0.0000000 -4.006199697 0 -4.006200e+00 NA 1.832867 2.574007 0.9958677 - - - conserved hypothetical protein 1.695844 2.402408 0.8570676 604 NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] CR Alcohol dehydrogenase, zinc-binding domain protein TRUE TRUE 52 TRUE 0.092348959 5.798586e-02 0.0170853161 0.447122 0.1714116 U 0.2267807 0.4700267 23.950 0.548436296 0.01428743 0.353115801 0.0172994478 FALSE 0.5 0.0172994478 FALSE 0.0262234562 0.4700267 0.02169197 0.2031010 395019 46419 3088519 3088520 1 187 Same - - 0.0000000 -27.616297517 0 3.305613e+00 413.4 1.528542 2.044745 0.7442994 3203 Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane] M porin, Gram-negative type 1.315973 1.822830 0.6661672 3842 ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] E ABC transporter related - FALSE TRUE 52 TRUE 0.092348959 4.481067e-01 0.1040386517 0.447122 0.7427214 N 0.4361812 0.5567888 32.650 0.279107942 0.14106637 0.148221753 0.0597851004 FALSE 0.5 0.0597851004 FALSE 0.0713795905 0.5567888 0.16564704 0.2652519 395019 46419 3088520 3088521 1 -7 Same - - 15.5710773 7.442146524 0 4.446322e+01 413.4 1.315973 1.822830 0.6661672 3842 ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] E ABC transporter related 1.474632 2.085044 0.7245984 1178 ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism] P binding-protein-dependent transport systems inner membrane component - FALSE TRUE 51 TRUE 2.574862302 2.247385e+00 1.7886098267 0.447122 0.7427214 N 0.4361812 0.9338441 4.290 0.624990617 0.92355770 0.428263312 0.9526861603 TRUE 0.5 0.9526861603 TRUE 0.8894762589 0.9338441 0.82844078 0.8022327 395019 46419 3088521 3088522 1 99 Same - - 18.5741089 7.442146524 0 5.153017e+01 397.0 1.474632 2.085044 0.7245984 1178 ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism] P binding-protein-dependent transport systems inner membrane component 1.348527 1.818788 0.6574081 1840 ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism] P extracellular solute-binding protein, family 1 P FALSE TRUE 50 TRUE 2.769383237 2.340809e+00 1.7886098267 0.447122 1.0362192 Y 2.3800988 0.9769543 26.265 0.507876938 0.97454604 0.316865243 0.9753161112 TRUE 0.5 0.9753161112 TRUE 0.8850909963 0.9769543 0.88184714 0.9241399 395019 46419 3088522 3088523 1 280 Same - - 0.0000000 -4.864811243 0 -5.663488e+00 413.4 1.348527 1.818788 0.6574081 1840 ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism] P extracellular solute-binding protein, family 1 1.916343 2.666774 0.8710714 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family - FALSE TRUE 49 TRUE 0.092348959 7.831619e-02 0.0249455123 0.447122 0.7427214 N 0.4361812 0.5424322 36.015 0.097024435 0.08977371 0.046068671 0.0104864067 FALSE 0.5 0.0104864067 FALSE 0.0158596351 0.5424322 0.13041905 0.2541027 395019 46419 3088523 3088524 1 95 Same - - 0.0000000 0.485950610 0 4.859506e-01 413.4 1.916343 2.666774 0.8710714 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family 1.625269 2.261734 0.7931483 1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU RND efflux system, outer membrane lipoprotein, NodT family - FALSE TRUE 48 TRUE 0.092348959 5.161902e-03 0.2337141165 0.447122 0.7427214 N 0.4361812 0.5725691 25.810 0.516184092 0.19447813 0.324105717 0.2048241187 FALSE 0.5 0.2048241187 FALSE 0.2139107072 0.5725691 0.20322304 0.2779513 395019 46419 3088524 3088525 1 5 Same - - 1.6817586 3.524239878 0 4.997655e+00 397.0 1.625269 2.261734 0.7931483 1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU RND efflux system, outer membrane lipoprotein, NodT family 1.477874 2.055297 0.7029328 841 Cation/multidrug efflux pump [Defense mechanisms] V transporter, hydrophobe/amphiphile efflux-1 (HAE1) family - FALSE TRUE 47 TRUE 0.206179138 7.141885e-01 0.9371300949 0.447122 1.0362192 N 0.4361812 0.7092273 10.690 0.876772829 0.55760781 0.761785308 0.8996803026 TRUE 0.5 0.8996803026 TRUE 0.8704563131 0.7092273 0.48569916 0.4120849 395019 46419 3088525 3088526 1 21 Same - - 9.8986030 2.654741308 0 2.113119e+01 413.4 1.477874 2.055297 0.7029328 841 Cation/multidrug efflux pump [Defense mechanisms] V transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1.521883 2.120514 0.7451210 845 Membrane-fusion protein [Cell envelope biogenesis, outer membrane] M efflux transporter, RND family, MFP subunit - FALSE TRUE 46 TRUE 2.079397758 1.770636e+00 0.7994617769 0.447122 0.7427214 N 0.4361812 0.8547157 14.965 0.822319504 0.81658444 0.675335249 0.9537137214 TRUE 0.5 0.9537137214 TRUE 0.9229113970 0.8547157 0.72120280 0.6283371 395019 46419 3088528 3088529 1 -3 Same - - 7.0932186 3.423729817 0 3.056368e+01 413.4 1.598881 2.246338 0.8152410 642 Signal transduction histidine kinase [Signal transduction mechanisms] T integral membrane sensor signal transduction histidine kinase 1.573824 2.213831 0.8261313 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family T FALSE TRUE 45 TRUE 1.680886003 2.019925e+00 0.9210172101 0.447122 0.7427214 Y 2.3800988 0.9259633 6.530 0.827310285 0.91372354 0.682862366 0.9806714576 TRUE 0.5 0.9806714576 TRUE 0.9557083570 0.9259633 0.81831507 0.7823284 395019 46419 3088529 3088530 1 260 Same - - 0.0000000 -2.427748236 0 -2.696638e+00 413.4 1.573824 2.213831 0.8261313 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family 3.458983 4.740099 1.0597091 2207 AraC-type DNA-binding domain-containing p