Taxon Scaffold Gene1 Gene2 Consecutive Sep Code Strand1 Strand2 GNScore GNWithin GNAll GNMinus GOScore CAI CAI.Alm CBI COG COGanno COGfun Description nCAI nCAI.Alm nCBI nCOG nCOGanno nCOGfun nDescription COGsim forward forwardplus sumBias same bbfGNScore bbfGNMinus bbfGNWithin bbfGNAll bbfGOScore COGsimClass cfCOG pSame groupIndexD pSameD pOpLogistic pOpDistance pOp1 bOp1 pCAI pOp bOp pOp2 pSame pOpLogisticLike pOpLogisticM 397945 7078 2085489 2085490 1 160 Same + + 160.9205160 22.336505152 0 8.589534e+02 286.2 1.427767 1.910448 0.6644602 593 ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] L chromosomal replication initiator protein DnaA 1.257712 1.668715 0.5879384 592 DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] L DNA polymerase III, beta subunit L FALSE FALSE 1 TRUE 3.8129277 3.0111832 2.0652162 0.9730156 0.7675461 Y 2.4748563 0.9834326 32.99431818 0.15858413 0.98285607 0.23182467 0.915290822 TRUE 0.5 0.915290822 TRUE 0.572452866 0.9834326 0.87660508 0.9729039 397945 7078 2085490 2085491 1 74 Same + + 101.2304515 53.907624479 0 1.365848e+02 286.2 1.257712 1.668715 0.5879384 592 DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] L DNA polymerase III, beta subunit 1.263376 1.668913 0.5137586 187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] L DNA gyrase, B subunit L FALSE FALSE 2 TRUE 3.6082314 2.3930750 2.7987392 0.9730156 0.7675461 Y 2.4748563 0.9830672 24.46590909 0.43821031 0.98247146 0.55535603 0.977638780 TRUE 0.5 0.977638780 TRUE 0.846272348 0.9830672 0.87589164 0.9723129 397945 7078 2085492 2085493 1 0 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 3.336824 4.439684 0.9689945 2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription] K putative transcriptional regulator 2.535883 3.400262 0.9523225 - - - putative type I restriction enzyme, R subunit TRUE FALSE 2 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 7.98863636 0.83294748 0.50137371 0.88868971 0.833710666 TRUE 0.5 0.833710666 TRUE 0.692154086 0.6711523 0.31078474 0.5524768 397945 7078 2085493 2085494 1 86 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.535883 3.400262 0.9523225 - - - putative type I restriction enzyme, R subunit NA NA NA TRUE FALSE 1 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 26.02840909 0.36165234 0.50137371 0.47566036 0.362921842 FALSE 0.5 0.362921842 FALSE 0.203485142 0.6711523 0.31078474 0.5524768 397945 7078 2085494 2085495 1 223 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 3.852812 5.268685 1.0007649 - - - DNA polymerase, beta domain protein region TRUE FALSE 0 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 35.82386364 0.08706098 0.50137371 0.13246973 0.087498706 FALSE 0.5 0.087498706 FALSE 0.041228878 0.6711523 0.31078474 0.5524768 397945 7078 2085496 2085497 1 173 Same + + 0.0000000 0.157788370 0 -1.800622e+00 286.2 1.608651 2.106745 0.8057890 727 Predicted Fe-S-cluster oxidoreductase [General function prediction only] R protein of unknown function UPF0153 1.516469 2.009839 0.8064513 1764 Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones] O OsmC family protein FALSE FALSE 0 TRUE 0.6656184 0.4132705 1.2525205 0.9730156 0.7675461 U 0.9007526 0.6617253 33.85227273 0.13592996 0.47977250 0.20120983 0.126698758 FALSE 0.5 0.126698758 FALSE 0.061752508 0.6617253 0.29497034 0.5419694 397945 7078 2085497 2085498 1 71 Same + + 0.0000000 -1.924357591 0 -3.275791e+00 286.2 1.516469 2.009839 0.8064513 1764 Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones] O OsmC family protein 1.976275 2.735272 1.0037179 1146 Ferredoxin [Energy production and conversion] C 4Fe-4S ferredoxin, iron-sulfur binding domain protein - FALSE FALSE 1 TRUE 0.6656184 0.3488856 0.4154355 0.9730156 0.7675461 N 0.6071343 0.5498489 23.96590909 0.46163170 0.16686287 0.57859017 0.146564862 FALSE 0.5 0.146564862 FALSE 0.097953711 0.5498489 0.11240618 0.4249078 397945 7078 2085498 2085499 1 265 Same + + 0.0000000 -1.924357591 0 -1.924358e+00 210.0 1.976275 2.735272 1.0037179 1146 Ferredoxin [Energy production and conversion] C 4Fe-4S ferredoxin, iron-sulfur binding domain protein 1.781695 2.379102 0.8001969 460 Homoserine dehydrogenase [Amino acid transport and metabolism] E Homoserine dehydrogenase - FALSE FALSE 2 TRUE 0.6656184 0.4040734 0.4154355 0.9730156 1.1583515 N 0.6071343 0.5885051 37.13068182 0.06049180 0.28843329 0.09346144 0.025435270 FALSE 0.5 0.025435270 FALSE 0.013422243 0.5885051 0.17444014 0.4638310 397945 7078 2085501 2085502 1 170 Same + + 0.0000000 -1.924357591 0 -3.194681e+00 286.2 1.551100 2.131591 0.7252186 1199 Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] KL helicase c2 1.396184 1.874571 0.7731044 3871 Uncharacterized stress protein (general stress protein 26) [General function prediction only] R putative general stress protein 26 FALSE FALSE 3 TRUE 0.6656184 0.3521958 0.4154355 0.9730156 0.7675461 U 0.9007526 0.5896081 33.64772727 0.14121858 0.29166809 0.20842565 0.063417256 FALSE 0.5 0.063417256 FALSE 0.033982574 0.5896081 0.17622608 0.4649643 397945 7078 2085502 2085503 1 39 Same + + 0.0000000 -1.924357591 0 -1.924358e+00 NA 1.396184 1.874571 0.7731044 3871 Uncharacterized stress protein (general stress protein 26) [General function prediction only] R putative general stress protein 26 1.519838 1.973669 0.9043178 - - - hypothetical protein FALSE FALSE 4 TRUE 0.6656184 0.4040734 0.4154355 0.9730156 0.9720916 U 0.9007526 0.6110071 18.47159091 0.74767975 0.35211645 0.82592816 0.616927346 TRUE 0.5 0.616927346 TRUE 0.442181788 0.6110071 0.21105337 0.4872100 397945 7078 2085503 2085504 1 45 Same + + 0.0000000 -0.424075620 0 -4.240756e-01 NA 1.519838 1.973669 0.9043178 - - - hypothetical protein 1.747700 2.414554 0.9114330 847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] L DNA-directed DNA polymerase FALSE FALSE 5 TRUE 0.6656184 0.5174263 0.4939171 0.9730156 0.9720916 U 0.9007526 0.6251815 19.69318182 0.68147058 0.38987842 0.77404643 0.577547804 TRUE 0.5 0.577547804 TRUE 0.395657180 0.6251815 0.23431011 0.5022204 397945 7078 2085505 2085506 1 209 Same - - 0.0000000 0.000000000 0 0.000000e+00 286.2 2.107905 2.934165 0.9202599 1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism] KE transcriptional regulator, GntR family 1.548046 2.077665 0.8474889 - - - hypothetical protein TRUE FALSE 5 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6545721 35.44886364 0.09571409 0.46296638 0.14491965 0.083617095 FALSE 0.5 0.083617095 FALSE 0.040104756 0.6545721 0.28301619 0.5340669 397945 7078 2085507 2085508 1 172 Same + + 0.0000000 -1.924357591 0 -4.131655e+00 NA 1.495055 2.018673 0.6835521 119 Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism] E 2-isopropylmalate synthase 1.699616 2.385256 0.8917183 791 Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane] M NLP/P60 protein - FALSE FALSE 5 TRUE 0.6656184 0.3230941 0.4154355 0.9730156 0.9720916 N 0.6071343 0.5663090 33.79545455 0.13739430 0.22065727 0.20321203 0.043150873 FALSE 0.5 0.043150873 FALSE 0.025005666 0.5663090 0.13868843 0.4412943 397945 7078 2085508 2085509 1 81 Same + + 0.0000000 0.157788370 0 1.577884e-01 NA 1.699616 2.385256 0.8917183 791 Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane] M NLP/P60 protein 1.517386 2.044260 0.7355697 722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism] E phospho-2-dehydro-3-deoxyheptonate aldolase - FALSE FALSE 6 TRUE 0.6656184 1.1522496 1.2525205 0.9730156 0.9720916 N 0.6071343 0.6894414 25.45454545 0.39038328 0.54159680 0.50626534 0.430716426 FALSE 0.5 0.430716426 FALSE 0.249441454 0.6894414 0.34166302 0.5731686 397945 7078 2085509 2085510 1 238 Same + + 0.0000000 0.000000000 0 0.000000e+00 286.2 1.517386 2.044260 0.7355697 722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism] E phospho-2-dehydro-3-deoxyheptonate aldolase 1.707368 2.300493 0.7474056 5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms] T diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) - FALSE FALSE 7 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 N 0.6071343 0.6172446 36.31818182 0.07637279 0.36894742 0.11692082 0.046114462 FALSE 0.5 0.046114462 FALSE 0.022955644 0.6172446 0.22126905 0.4937880 397945 7078 2085511 2085512 1 117 Same - - 0.0000000 -0.630078283 0 -6.300783e-01 NA 1.874946 2.569651 0.8727293 - - - hypothetical protein 2.613236 3.510178 0.9542108 - - - hypothetical protein TRUE FALSE 7 TRUE 0.6656184 0.4958354 0.4821132 0.9730156 0.9720916 U 0.9007526 0.6227542 29.70454545 0.22535424 0.38353377 0.31778535 0.153253473 FALSE 0.5 0.153253473 FALSE 0.080080362 0.6227542 0.23031678 0.4996341 397945 7078 2085513 2085514 1 55 Same + + 0.0000000 -4.538482236 0 -8.235300e+00 286.2 1.536562 2.090233 0.7640139 2974 DNA recombination-dependent growth factor C [DNA replication, recombination, and repair] L putative exonuclease, RdgC 1.585214 2.111823 0.7266992 2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis. [General function prediction only] R nucleoside recognition domain protein FALSE FALSE 7 TRUE 0.6656184 0.2409308 0.3634745 0.9730156 0.7675461 U 0.9007526 0.5774016 21.61363636 0.58082436 0.25517989 0.68931579 0.321908339 FALSE 0.5 0.321908339 FALSE 0.204522395 0.5774016 0.15651060 0.4524930 397945 7078 2085517 2085518 1 36 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.028903 2.857071 0.9700789 - - - hypothetical protein 1.477978 1.959789 0.8202116 - - - hypothetical protein TRUE FALSE 7 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 17.90909091 0.77312024 0.50137371 0.84511352 0.774082616 TRUE 0.5 0.774082616 TRUE 0.605768902 0.6711523 0.31078474 0.5524768 397945 7078 2085518 2085519 1 77 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.477978 1.959789 0.8202116 - - - hypothetical protein 1.316000 1.747498 0.6166937 183 Acetyl-CoA acetyltransferase [Lipid metabolism] I acetyl-CoA acetyltransferase TRUE FALSE 6 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 24.92045455 0.41667572 0.50137371 0.53353187 0.418011886 FALSE 0.5 0.418011886 FALSE 0.243628505 0.6711523 0.31078474 0.5524768 397945 7078 2085519 2085520 1 115 Same - - 0.0000000 -7.857698387 0 -7.868772e+00 286.2 1.316000 1.747498 0.6166937 183 Acetyl-CoA acetyltransferase [Lipid metabolism] I acetyl-CoA acetyltransferase 1.447770 1.866972 0.8197673 789 Predicted transcriptional regulators [Transcription] K transcriptional regulator, MerR family - TRUE FALSE 5 TRUE 0.6656184 0.2459867 0.3351449 0.9730156 0.7675461 N 0.6071343 0.5355401 29.43181818 0.23312282 0.11741279 0.32739362 0.038868655 FALSE 0.5 0.038868655 FALSE 0.029089351 0.5355401 0.08971653 0.4108827 397945 7078 2085520 2085521 1 77 Same - - 9.4809632 0.827918064 0 1.054756e+01 286.2 1.447770 1.866972 0.8197673 789 Predicted transcriptional regulators [Transcription] K transcriptional regulator, MerR family 1.625015 2.274431 0.9736615 2608 Copper chaperone [Inorganic ion transport and metabolism] P Heavy metal transport/detoxification protein - TRUE FALSE 4 TRUE 1.9755405 1.5886931 1.3686825 0.9730156 0.7675461 N 0.6071343 0.8205473 24.92045455 0.41667572 0.77743960 0.53353187 0.713894061 TRUE 0.5 0.713894061 TRUE 0.487301084 0.8205473 0.57092556 0.7344544 397945 7078 2085522 2085523 1 104 Same + + 0.0000000 -0.600498112 0 -6.004981e-01 286.2 1.940114 2.673052 0.8342830 2217 Cation transport ATPase [Inorganic ion transport and metabolism] P heavy metal translocating P-type ATPase 1.528063 2.108640 0.7423428 840 Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] NT methyl-accepting chemotaxis sensory transducer - FALSE FALSE 4 TRUE 0.6656184 0.5018770 0.4849718 0.9730156 0.7675461 N 0.6071343 0.5667155 28.08522727 0.27611176 0.22194636 0.37917128 0.098128781 FALSE 0.5 0.098128781 FALSE 0.058161313 0.5667155 0.13934003 0.4417025 397945 7078 2085524 2085525 1 -12 Same - - 1.9848256 0.000000000 0 3.961988e+00 NA 6.936943 9.415041 1.1147498 - - - hypothetical protein 8.669900 11.349017 1.0808081 - - - Peptidoglycan-binding LysM TRUE FALSE 4 TRUE 1.0299540 1.4181143 0.8046672 0.9730156 0.9720916 U 0.9007526 0.7417906 0.78977273 0.90457193 0.64576442 0.93818802 0.945296018 TRUE 0.5 0.945296018 TRUE 0.877976420 0.7417906 0.43151232 0.6347334 397945 7078 2085525 2085526 1 273 Same - - 0.0000000 0.000000000 0 0.000000e+00 286.2 8.669900 11.349017 1.0808081 - - - Peptidoglycan-binding LysM 1.257686 1.677381 0.5299130 3696 Putative silver efflux pump [Inorganic ion transport and metabolism] P heavy metal efflux pump, CzcA family TRUE FALSE 3 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6545721 37.31250000 0.05721829 0.46296638 0.08857198 0.049719151 FALSE 0.5 0.049719151 FALSE 0.023396135 0.6545721 0.28301619 0.5340669 397945 7078 2085526 2085527 1 -3 Same - - 27.8824435 3.451290336 0 4.475400e+01 286.2 1.257686 1.677381 0.5299130 3696 Putative silver efflux pump [Inorganic ion transport and metabolism] P heavy metal efflux pump, CzcA family 1.386408 1.917598 0.6710687 845 Membrane-fusion protein [Cell envelope biogenesis, outer membrane] M efflux transporter, RND family, MFP subunit - TRUE FALSE 2 TRUE 2.8694370 1.9659027 1.6315626 0.9730156 0.7675461 N 0.6071343 0.8957196 4.56250000 0.87879330 0.88152357 0.92069418 0.981800429 TRUE 0.5 0.981800429 TRUE 0.946419750 0.8957196 0.70898371 0.8385970 397945 7078 2085527 2085528 1 73 Same - - 2.9937188 2.278430110 0 6.360123e+00 286.2 1.386408 1.917598 0.6710687 845 Membrane-fusion protein [Cell envelope biogenesis, outer membrane] M efflux transporter, RND family, MFP subunit 1.296170 1.774577 0.6104617 1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU outer membrane efflux protein M TRUE FALSE 1 TRUE 1.2738740 1.4941545 1.5478616 0.9730156 0.7675461 Y 2.4748563 0.9041028 24.30113636 0.44594173 0.89205824 0.56308269 0.869308443 TRUE 0.5 0.869308443 TRUE 0.679349577 0.9041028 0.72469392 0.8508074 397945 7078 2085529 2085530 1 -3 Same + + 0.0000000 0.000000000 0 0.000000e+00 286.2 1.487042 1.998547 0.7060684 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family 1.626234 2.211036 0.6912605 642 Signal transduction histidine kinase [Signal transduction mechanisms] T integral membrane sensor signal transduction histidine kinase T FALSE FALSE 1 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 Y 2.4748563 0.8181835 4.56250000 0.87879330 0.77385648 0.92069418 0.961256151 TRUE 0.5 0.961256151 TRUE 0.904590874 0.8181835 0.56666476 0.7313279 397945 7078 2085531 2085532 1 170 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.563514 2.066412 0.8533542 - - - NIPSNAP family containing protein NA NA NA TRUE FALSE 1 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 33.64772727 0.14121858 0.50137371 0.20842565 0.141886283 FALSE 0.5 0.141886283 FALSE 0.069031748 0.6711523 0.31078474 0.5524768 397945 7078 2085533 2085534 1 59 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 2.155256 2.909844 0.8885811 4525 ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter-related protein FALSE FALSE 1 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 22.27840909 0.54395221 0.50137371 0.65634040 0.545314977 TRUE 0.5 0.545314977 TRUE 0.349738398 0.6711523 0.31078474 0.5524768 397945 7078 2085534 2085535 1 -13 Same + + 13.8862624 36.117355775 0 1.746775e+02 286.2 2.155256 2.909844 0.8885811 4525 ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter-related protein 1.892259 2.617404 0.8744410 600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism] P binding-protein-dependent transport systems inner membrane component P FALSE FALSE 2 TRUE 2.3345840 2.4909091 2.1749383 0.9730156 0.7675461 Y 2.4748563 0.9630351 0.65340909 0.90534389 0.96093846 0.93870647 0.995767986 TRUE 0.5 0.995767986 TRUE 0.980041802 0.9630351 0.83697502 0.9403300 397945 7078 2085536 2085537 1 104 Same - - 0.0000000 -0.247676738 0 -3.414065e+00 NA 1.396549 1.879988 0.7352500 625 Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] O glutathione S-transferase, C-terminal domain 1.935523 2.725572 0.9550791 - - - protein of unknown function UPF0153 TRUE FALSE 2 TRUE 0.6656184 0.3452777 0.5092888 0.9730156 0.9720916 U 0.9007526 0.6147148 28.08522727 0.27611176 0.36216253 0.37917128 0.178019769 FALSE 0.5 0.178019769 FALSE 0.095665090 0.6147148 0.21712242 0.4911150 397945 7078 2085537 2085538 1 7 Same - - 0.0000000 -0.128323755 0 -1.347895e+00 NA 1.935523 2.725572 0.9550791 - - - protein of unknown function UPF0153 1.533379 2.086838 0.8006266 431 Predicted flavoprotein [General function prediction only] R NADPH-dependent FMN reductase TRUE FALSE 1 TRUE 0.6656184 0.4351727 0.5139699 0.9730156 0.9720916 U 0.9007526 0.6212344 10.66477273 0.80841563 0.37953620 0.87107668 0.720759233 TRUE 0.5 0.720759233 TRUE 0.554551882 0.6212344 0.22781884 0.4980182 397945 7078 2085539 2085540 1 -3 Same + + 93.5361039 53.907624479 0 5.574969e+02 286.2 1.610089 2.133547 0.7101386 445 NAD/FAD-utilizing enzyme apparently involved in cell division [Cell division and chromosome partitioning] D glucose inhibited division protein A 2.148906 2.897134 0.8706360 357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] M methyltransferase GidB - FALSE FALSE 1 TRUE 3.5777782 2.9269126 2.7987392 0.9730156 0.7675461 N 0.6071343 0.9598784 4.56250000 0.87879330 0.95746334 0.92069418 0.993909848 TRUE 0.5 0.993909848 TRUE 0.972692680 0.9598784 0.83087778 0.9353646 397945 7078 2085540 2085541 1 30 Same + + 0.0000000 -5.422687667 0 -1.100178e+01 286.2 2.148906 2.897134 0.8706360 357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] M methyltransferase GidB 1.791639 2.361563 0.8667316 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E Lysine exporter protein (LYSE/YGGA) - FALSE FALSE 2 TRUE 0.6656184 0.2160578 0.3519327 0.9730156 0.7675461 N 0.6071343 0.5348394 16.50568182 0.81093710 0.11492330 0.87290311 0.357714287 FALSE 0.5 0.357714287 FALSE 0.294292677 0.5348394 0.08860916 0.4102010 397945 7078 2085541 2085542 1 46 Same + + 0.0000000 -5.422687667 0 -8.707378e+00 286.2 1.791639 2.361563 0.8667316 1280 Putative threonine efflux protein [Amino acid transport and metabolism] E Lysine exporter protein (LYSE/YGGA) 1.458968 1.923161 0.7162531 1192 ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] D Cobyrinic acid a,c-diamide synthase - FALSE FALSE 3 TRUE 0.6656184 0.2364753 0.3519327 0.9730156 0.7675461 N 0.6071343 0.5363077 19.89772727 0.67099469 0.12013231 0.76556782 0.217807280 FALSE 0.5 0.217807280 FALSE 0.169433752 0.5363077 0.09092993 0.4116299 397945 7078 2085542 2085543 1 15 Same + + 0.0000000 2.614394521 0 9.325791e-01 NA 1.458968 1.923161 0.7162531 1192 ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] D Cobyrinic acid a,c-diamide synthase 1.661910 2.262741 0.8076664 3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] R protein of unknown function DUF1234 FALSE FALSE 4 TRUE 0.6656184 1.2374161 1.5706728 0.9730156 0.9720916 U 0.9007526 0.7491448 12.86363636 0.81888771 0.65923205 0.87863786 0.897403665 TRUE 0.5 0.897403665 TRUE 0.783325075 0.7491448 0.44431196 0.6436721 397945 7078 2085543 2085544 1 30 Same + + 0.0000000 2.614394521 0 8.455677e-01 NA 1.661910 2.262741 0.8076664 3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] R protein of unknown function DUF1234 1.449531 1.956718 0.7107335 1475 Predicted transcriptional regulators [Transcription] K parB-like partition protein FALSE FALSE 5 TRUE 0.6656184 1.2272598 1.5706728 0.9730156 0.9720916 U 0.9007526 0.7485926 16.50568182 0.81093710 0.65823001 0.87290311 0.892018524 TRUE 0.5 0.892018524 TRUE 0.773561353 0.7485926 0.44334935 0.6429984 397945 7078 2085545 2085546 1 11 Same - - 0.0000000 0.000000000 0 -2.032282e-01 286.2 1.559113 2.137795 0.7740885 392 Predicted integral membrane protein [Function unknown] S integral membrane protein 1.368347 1.883419 0.7995215 2246 Predicted membrane protein [Function unknown] S GtrA family protein TRUE FALSE 5 TRUE 0.6656184 0.5443304 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6348773 11.67613636 0.81505215 0.41473766 0.87587588 0.757452674 TRUE 0.5 0.757452674 TRUE 0.595366252 0.6348773 0.25030547 0.5126172 397945 7078 2085546 2085547 1 -3 Same - - 10.1183973 5.237793862 0 1.665547e+01 286.2 1.368347 1.883419 0.7995215 2246 Predicted membrane protein [Function unknown] S GtrA family protein 1.346049 1.793712 0.6116214 1232 Protoporphyrinogen oxidase [Coenzyme metabolism] H amine oxidase TRUE FALSE 4 TRUE 2.0449251 1.6689655 1.7381937 0.9730156 0.7675461 U 0.9007526 0.8660442 4.56250000 0.87879330 0.84259345 0.92069418 0.974881344 TRUE 0.5 0.974881344 TRUE 0.931960760 0.8660442 0.65388350 0.7963617 397945 7078 2085547 2085548 1 0 Same - - 6.8756378 5.459299710 0 1.473749e+01 286.2 1.346049 1.793712 0.6116214 1232 Protoporphyrinogen oxidase [Coenzyme metabolism] H amine oxidase 1.336293 1.746919 0.6333507 451 Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] MG NAD-dependent epimerase/dehydratase - TRUE FALSE 3 TRUE 1.7901375 1.6418456 1.7461036 0.9730156 0.7675461 N 0.6071343 0.8288402 7.98863636 0.83294748 0.78984860 0.88868971 0.949342166 TRUE 0.5 0.949342166 TRUE 0.875855289 0.8288402 0.58591189 0.7454919 397945 7078 2085548 2085549 1 52 Same - - 1.6933194 2.232871123 0 2.029643e+00 NA 1.336293 1.746919 0.6333507 451 Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] MG NAD-dependent epimerase/dehydratase 1.812260 2.469762 0.8082440 - - - hypothetical protein TRUE FALSE 2 TRUE 0.9437506 1.3260712 1.5450779 0.9730156 0.9720916 U 0.9007526 0.7763633 21.00000000 0.61552466 0.70685696 0.71937418 0.794254336 TRUE 0.5 0.794254336 TRUE 0.607992244 0.7763633 0.49207195 0.6774066 397945 7078 2085549 2085550 1 13 Same - - 0.0000000 2.232871123 0 2.029643e+00 NA 1.812260 2.469762 0.8082440 - - - hypothetical protein 1.496146 1.997521 0.7557514 300 Short-chain dehydrogenases of various substrate specificities [General function prediction only] R short-chain dehydrogenase/reductase SDR TRUE FALSE 1 TRUE 0.6656184 1.3260712 1.5450779 0.9730156 0.9720916 U 0.9007526 0.7522763 12.28409091 0.81624242 0.66488674 0.87673390 0.898095669 TRUE 0.5 0.898095669 TRUE 0.784065357 0.7522763 0.44977560 0.6475007 397945 7078 2085550 2085551 1 73 Same - - 36.9316657 6.656104024 0 1.393463e+02 286.2 1.496146 1.997521 0.7557514 300 Short-chain dehydrogenases of various substrate specificities [General function prediction only] R short-chain dehydrogenase/reductase SDR 1.616075 2.156087 0.7351771 277 FAD/FMN-containing dehydrogenases [Energy production and conversion] C FAD linked oxidase domain protein TRUE FALSE 0 TRUE 3.0797569 2.4025644 1.7942599 0.9730156 0.7675461 U 0.9007526 0.9305943 24.30113636 0.44594173 0.92410097 0.56308269 0.907403501 TRUE 0.5 0.907403501 TRUE 0.734647631 0.9305943 0.77476473 0.8902342 397945 7078 2085551 2085552 1 -6 Same - - 13.6452798 5.460844912 0 4.976748e+01 286.2 1.616075 2.156087 0.7351771 277 FAD/FMN-containing dehydrogenases [Energy production and conversion] C FAD linked oxidase domain protein 1.697548 2.321963 0.7978421 382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism] H UbiA prenyltransferase - TRUE FALSE -1 TRUE 2.3251114 2.0297090 1.7469845 0.9730156 0.7675461 N 0.6071343 0.8751456 1.59659091 0.89983276 0.85481393 0.93499834 0.981444066 TRUE 0.5 0.981444066 TRUE 0.948177290 0.8751456 0.67069835 0.8091542 397945 7078 2085553 2085554 1 116 Same + + 0.0000000 -0.346435249 0 4.088850e-01 286.2 2.006718 2.803429 0.9329693 - - - methyltransferase type 12 1.527133 2.061734 0.6311497 1462 Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane] M Peptidoglycan-binding domain 1 protein FALSE FALSE -1 TRUE 0.6656184 1.1733065 0.5024625 0.9730156 0.7675461 U 0.9007526 0.6524859 29.54545455 0.22984631 0.45799572 0.32335082 0.201395810 FALSE 0.5 0.201395810 FALSE 0.103777744 0.6524859 0.27953734 0.5317736 397945 7078 2085556 2085557 1 -3 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.576216 2.207194 0.7919193 2875 Precorrin-4 methylase [Coenzyme metabolism] H precorrin-4 C11-methyltransferase NA NA NA FALSE FALSE 0 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 4.56250000 0.87879330 0.50137371 0.92069418 0.879377366 TRUE 0.5 0.879377366 TRUE 0.765773748 0.6711523 0.31078474 0.5524768 397945 7078 2085557 2085558 1 -3 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 1.388469 1.866725 0.7400422 2082 Precorrin isomerase [Coenzyme metabolism] H Precorrin-8X methylmutase CbiC/CobH FALSE FALSE 1 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 4.56250000 0.87879330 0.50137371 0.92069418 0.879377366 TRUE 0.5 0.879377366 TRUE 0.765773748 0.6711523 0.31078474 0.5524768 397945 7078 2085558 2085559 1 8 Same + + 67.4081603 -6.805974839 0 1.280045e+02 31.0 1.388469 1.866725 0.7400422 2082 Precorrin isomerase [Coenzyme metabolism] H Precorrin-8X methylmutase CbiC/CobH 1.387255 1.847232 0.6588609 1903 Cobalamin biosynthesis protein CbiD [Coenzyme metabolism] H cobalamin biosynthesis protein CbiD H FALSE FALSE 2 TRUE 3.4158760 2.3768888 0.3396258 0.9730156 2.5680418 Y 2.4748563 0.9773024 10.88068182 0.80961968 0.97636517 0.87194930 0.994340004 TRUE 0.5 0.994340004 TRUE 0.964498155 0.9773024 0.86465253 0.9630243 397945 7078 2085559 2085560 1 3 Same + + 49.2051581 32.024489271 0 1.401388e+02 31.0 1.387255 1.847232 0.6588609 1903 Cobalamin biosynthesis protein CbiD [Coenzyme metabolism] H cobalamin biosynthesis protein CbiD 1.452867 1.960149 0.6935236 2242 Precorrin-6B methylase 2 [Coenzyme metabolism] H precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit H FALSE FALSE 3 TRUE 3.2496249 2.4066419 2.1467080 0.9730156 2.5680418 Y 2.4748563 0.9868661 9.19318182 0.81615233 0.98645633 0.87666899 0.996916780 TRUE 0.5 0.996916780 TRUE 0.971103216 0.9868661 0.88331553 0.9784716 397945 7078 2085560 2085561 1 -3 Same + + 51.8497390 -9.784430876 0 7.689771e+01 31.0 1.452867 1.960149 0.6935236 2242 Precorrin-6B methylase 2 [Coenzyme metabolism] H precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 1.477300 2.022305 0.7450089 2243 Precorrin-2 methylase [Coenzyme metabolism] H precorrin-2 C20-methyltransferase H FALSE FALSE 4 TRUE 3.3045130 2.2096011 0.3282970 0.9730156 2.5680418 Y 2.4748563 0.9748312 4.56250000 0.87879330 0.97372549 0.92069418 0.996292128 TRUE 0.5 0.996292128 TRUE 0.978012573 0.9748312 0.85984455 0.9590637 397945 7078 2085561 2085562 1 -3 Same + + 4.3899836 2.565349927 0 8.043307e+00 31.0 1.477300 2.022305 0.7450089 2243 Precorrin-2 methylase [Coenzyme metabolism] H precorrin-2 C20-methyltransferase 1.348592 1.836160 0.7142223 - - - cobalamin (vitamin B12) biosynthesis CbiG protein FALSE FALSE 5 TRUE 1.4837470 1.5404213 1.5678575 0.9730156 2.5680418 U 0.9007526 0.8959716 4.56250000 0.87879330 0.88184304 0.92069418 0.981855070 TRUE 0.5 0.981855070 TRUE 0.946535496 0.8959716 0.70945491 0.8389621 397945 7078 2085562 2085563 1 -3 Same + + 4.3899836 -0.318178590 0 5.159779e+00 31.0 1.348592 1.836160 0.7142223 - - - cobalamin (vitamin B12) biosynthesis CbiG protein 1.611320 2.290777 0.8628214 - - - cobalamin (vitamin B12) biosynthesis CbiG protein FALSE FALSE 6 TRUE 1.4837470 1.4655892 0.5053437 0.9730156 2.5680418 U 0.9007526 0.8534920 4.56250000 0.87879330 0.82531192 0.92069418 0.971634657 TRUE 0.5 0.971634657 TRUE 0.925308729 0.8534920 0.63081433 0.7789466 397945 7078 2085563 2085564 1 56 Same + + 0.0000000 0.000000000 0 -3.927261e-01 NA 1.611320 2.290777 0.8628214 - - - cobalamin (vitamin B12) biosynthesis CbiG protein 1.284779 1.760043 0.7236471 - - - hypothetical protein FALSE FALSE 7 TRUE 0.6656184 0.5226540 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6504767 21.80113636 0.57018847 0.45317812 0.67991566 0.523677841 TRUE 0.5 0.523677841 TRUE 0.336078221 0.6504767 0.27618987 0.5295696 397945 7078 2085564 2085565 1 46 Same + + 0.0000000 0.000000000 0 -9.582331e-01 NA 1.284779 1.760043 0.7236471 - - - hypothetical protein 1.385849 1.882089 0.6815814 1010 Precorrin-3B methylase [Coenzyme metabolism] H precorrin-3B C17-methyltransferase FALSE FALSE 8 TRUE 0.6656184 0.4676411 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6468521 19.89772727 0.67099469 0.44441169 0.76556782 0.619967700 TRUE 0.5 0.619967700 TRUE 0.430177079 0.6468521 0.27015900 0.5256057 397945 7078 2085565 2085566 1 -3 Same + + 1.1245878 -0.234049314 0 8.905385e-01 286.2 1.385849 1.882089 0.6815814 1010 Precorrin-3B methylase [Coenzyme metabolism] H precorrin-3B C17-methyltransferase 1.224050 1.602285 0.7197654 3411 Ferredoxin [Energy production and conversion] C hypothetical protein - FALSE FALSE 9 TRUE 0.7873325 1.2306230 0.5104550 0.9730156 0.7675461 N 0.6071343 0.6333373 4.56250000 0.87879330 0.41084011 0.92069418 0.834872183 TRUE 0.5 0.834872183 TRUE 0.704841073 0.6333373 0.24776018 0.5109588 397945 7078 2085567 2085568 1 17 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.138884 2.983277 1.0222003 - - - hypothetical protein 1.745194 2.303079 0.9475308 - - - hypothetical protein TRUE FALSE 9 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 13.41477273 0.82609280 0.50137371 0.88380323 0.826880796 TRUE 0.5 0.826880796 TRUE 0.681729694 0.6711523 0.31078474 0.5524768 397945 7078 2085568 2085569 1 123 Same - - 0.0000000 -0.758286483 0 -7.582865e-01 NA 1.745194 2.303079 0.9475308 - - - hypothetical protein 1.392795 1.909520 0.7437174 1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only] R hypothetical protein TRUE FALSE 8 TRUE 0.6656184 0.4861313 0.4762560 0.9730156 0.9720916 U 0.9007526 0.6216160 30.21590909 0.21218894 0.38054185 0.30132062 0.141969163 FALSE 0.5 0.141969163 FALSE 0.073857643 0.6216160 0.22844592 0.4984237 397945 7078 2085569 2085570 1 58 Same - - 0.0000000 -1.022938104 0 -4.177484e+00 286.2 1.392795 1.909520 0.7437174 1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only] R hypothetical protein 1.824858 2.588340 0.8379634 2207 AraC-type DNA-binding domain-containing proteins [Transcription] K transcriptional regulator, AraC family TRUE FALSE 7 TRUE 0.6656184 0.3210008 0.4522871 0.9730156 0.7675461 U 0.9007526 0.5905253 22.14204545 0.55126971 0.29434890 0.66297190 0.338820931 FALSE 0.5 0.338820931 FALSE 0.209801082 0.5905253 0.17771191 0.4659077 397945 7078 2085571 2085572 1 44 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.371266 1.881463 0.6811428 2271 Sugar phosphate permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 1.873697 2.549161 0.8748694 - - - hypothetical protein FALSE FALSE 7 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 19.45454545 0.69434741 0.50137371 0.78436501 0.695512324 TRUE 0.5 0.695512324 TRUE 0.506017251 0.6711523 0.31078474 0.5524768 397945 7078 2085572 2085573 1 888 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.873697 2.549161 0.8748694 - - - hypothetical protein 2.987380 4.062308 1.0310560 - - - cysteine protease domain, YopT-type FALSE FALSE 8 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 39.89772727 0.02215066 0.50137371 0.03500188 0.022269988 FALSE 0.5 0.022269988 FALSE 0.010111273 0.6711523 0.31078474 0.5524768 397945 7078 2085574 2085575 1 155 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.681704 2.418487 0.9160673 - - - hypothetical protein 1.854405 2.493330 0.8560884 - - - hypothetical protein TRUE FALSE 8 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 32.59090909 0.16989420 0.50137371 0.24682590 0.170670546 FALSE 0.5 0.170670546 FALSE 0.084491371 0.6711523 0.31078474 0.5524768 397945 7078 2085575 2085576 1 38 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.854405 2.493330 0.8560884 - - - hypothetical protein 1.761241 2.348397 0.8438272 2020 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] O Isoprenylcysteine carboxyl methyltransferase TRUE FALSE 7 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 18.28977273 0.75653400 0.50137371 0.83265116 0.757544673 TRUE 0.5 0.757544673 TRUE 0.583538664 0.6711523 0.31078474 0.5524768 397945 7078 2085576 2085577 1 345 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.761241 2.348397 0.8438272 2020 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] O Isoprenylcysteine carboxyl methyltransferase 3.974748 5.418470 1.1031156 - - - hypothetical protein TRUE FALSE 6 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 38.44886364 0.03901470 0.50137371 0.06103925 0.039221236 FALSE 0.5 0.039221236 FALSE 0.017977844 0.6711523 0.31078474 0.5524768 397945 7078 2085577 2085578 1 250 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 3.974748 5.418470 1.1031156 - - - hypothetical protein 2.012124 2.687308 0.9876350 3326 Predicted membrane protein [Function unknown] S protein of unknown function DUF1294 TRUE FALSE 5 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 36.68181818 0.06901044 0.50137371 0.10609864 0.069364309 FALSE 0.5 0.069364309 FALSE 0.032344148 0.6711523 0.31078474 0.5524768 397945 7078 2085578 2085579 1 2338 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.012124 2.687308 0.9876350 3326 Predicted membrane protein [Function unknown] S protein of unknown function DUF1294 2.833965 3.818575 0.9746509 3293 Transposase and inactivated derivatives [DNA replication, recombination, and repair] L transposase, IS4 family protein TRUE FALSE 4 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 40.04545455 0.02083444 0.50137371 0.03294776 0.020946834 FALSE 0.5 0.020946834 FALSE 0.009503498 0.6711523 0.31078474 0.5524768 397945 7078 2085580 2085581 1 15 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 3.559431 4.632365 1.0767742 - - - transposase, IS4 family protein FALSE FALSE 4 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 12.86363636 0.81888771 0.50137371 0.87863786 0.819701222 TRUE 0.5 0.819701222 TRUE 0.670926090 0.6711523 0.31078474 0.5524768 397945 7078 2085582 2085583 1 -3 Same - - 0.0000000 0.000000000 0 -1.138483e-01 NA 3.171831 4.127591 1.0091987 2350 Uncharacterized protein conserved in bacteria [Function unknown] S YCII-related protein 1.373751 1.860142 0.6506235 277 FAD/FMN-containing dehydrogenases [Energy production and conversion] C FAD linked oxidase domain protein TRUE FALSE 4 TRUE 0.6656184 0.5607764 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6529783 4.56250000 0.87879330 0.45917174 0.92069418 0.860250830 TRUE 0.5 0.860250830 TRUE 0.738534666 0.6529783 0.28035810 0.5323144 397945 7078 2085583 2085584 1 282 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.373751 1.860142 0.6506235 277 FAD/FMN-containing dehydrogenases [Energy production and conversion] C FAD linked oxidase domain protein 2.564760 3.331800 0.9833073 - - - hypothetical protein TRUE FALSE 3 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 37.48295455 0.05424175 0.50137371 0.08410992 0.054524330 FALSE 0.5 0.054524330 FALSE 0.025209809 0.6711523 0.31078474 0.5524768 397945 7078 2085584 2085585 1 179 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.564760 3.331800 0.9833073 - - - hypothetical protein 2.179525 3.214602 1.0158083 - - - Calcium-binding EF-hand-containing protein TRUE FALSE 2 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 34.21022727 0.12676590 0.50137371 0.18860541 0.127375411 FALSE 0.5 0.127375411 FALSE 0.061438329 0.6711523 0.31078474 0.5524768 397945 7078 2085587 2085588 1 104 Same - - 0.0000000 -3.979779403 0 -1.064329e+01 286.2 1.207390 1.619437 0.7017602 2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism] Q uncharacterized domain 1 1.297824 1.771836 0.6078558 427 Acetyl-CoA hydrolase [Energy production and conversion] C Acetyl-CoA hydrolase - TRUE FALSE 1 TRUE 0.6656184 0.2195984 0.3699221 0.9730156 0.7675461 N 0.6071343 0.5366494 28.08522727 0.27611176 0.12134072 0.37917128 0.050038628 FALSE 0.5 0.050038628 FALSE 0.036981887 0.5366494 0.09147035 0.4119628 397945 7078 2085592 2085593 1 160 Same - - 0.0000000 0.000000000 0 0.000000e+00 286.2 1.559868 2.173193 0.7567771 840 Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] NT methyl-accepting chemotaxis sensory transducer 1.488156 1.981203 0.6751552 1032 Fe-S oxidoreductase [Energy production and conversion] C Radical SAM domain protein - TRUE FALSE 0 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 N 0.6071343 0.6172446 32.99431818 0.15858413 0.36894742 0.23182467 0.099254469 FALSE 0.5 0.099254469 FALSE 0.050830685 0.6172446 0.22126905 0.4937880 397945 7078 2085593 2085594 1 27 Same - - 0.0000000 0.000000000 0 -5.521183e-01 286.2 1.488156 1.981203 0.6751552 1032 Fe-S oxidoreductase [Energy production and conversion] C Radical SAM domain protein 1.394669 1.881313 0.7707776 663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only] R putative carbonic anhydrase, family 3 TRUE FALSE -1 TRUE 0.6656184 0.5056890 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6322838 15.83522727 0.82449435 0.40816282 0.88265988 0.764143795 TRUE 0.5 0.764143795 TRUE 0.605191914 0.6322838 0.24601996 0.5098258 397945 7078 2085594 2085595 1 84 Same - - 0.0000000 0.000000000 0 -1.772065e-01 NA 1.394669 1.881313 0.7707776 663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only] R putative carbonic anhydrase, family 3 1.905806 2.655959 0.9376106 3603 Uncharacterized conserved protein [Function unknown] S hypothetical protein TRUE FALSE -2 TRUE 0.6656184 0.5504973 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6523046 25.81250000 0.37240985 0.45756215 0.48722073 0.333576497 FALSE 0.5 0.333576497 FALSE 0.186919627 0.6523046 0.27923511 0.5315745 397945 7078 2085599 2085600 1 36 Same - - 49.8550911 42.127774536 0 1.415225e+02 286.2 1.499724 2.059476 0.7241239 1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] P ABC transporter-related protein 1.389610 1.873186 0.6156270 4986 ABC-type anion transport system, duplicated permease component [Inorganic ion transport and metabolism] P binding-protein-dependent transport systems inner membrane component P TRUE FALSE -3 TRUE 3.2582564 2.4107257 2.2776132 0.9730156 0.7675461 Y 2.4748563 0.9762701 17.90909091 0.77312024 0.97526414 0.84511352 0.992611897 TRUE 0.5 0.992611897 TRUE 0.955359039 0.9762701 0.86264341 0.9613684 397945 7078 2085600 2085601 1 131 Same - - 0.0000000 -1.216728695 0 -2.420814e+00 286.2 1.389610 1.873186 0.6156270 4986 ABC-type anion transport system, duplicated permease component [Inorganic ion transport and metabolism] P binding-protein-dependent transport systems inner membrane component 1.771314 2.420436 0.8188323 654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] HC Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family - TRUE FALSE -4 TRUE 0.6656184 0.3793931 0.4406254 0.9730156 0.7675461 N 0.6071343 0.5541954 30.82386364 0.20208080 0.18137848 0.28852150 0.053132232 FALSE 0.5 0.053132232 FALSE 0.033177140 0.5541954 0.11932745 0.4292083 397945 7078 2085604 2085605 1 290 Same + + 0.0000000 0.000000000 0 0.000000e+00 286.2 1.831903 2.542966 0.8441459 1414 Transcriptional regulator [Transcription] K transcriptional regulator, IclR family 1.444974 1.991415 0.7405832 501 Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] O peptidase M48, Ste24p - FALSE FALSE -4 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 N 0.6071343 0.6172446 37.65909091 0.05125667 0.36894742 0.07961948 0.030619280 FALSE 0.5 0.030619280 FALSE 0.015118849 0.6172446 0.22126905 0.4937880 397945 7078 2085605 2085606 1 116 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.444974 1.991415 0.7405832 501 Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] O peptidase M48, Ste24p 1.434536 1.914784 0.8504629 - - - hypothetical protein FALSE FALSE -3 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 29.54545455 0.22984631 0.50137371 0.32335082 0.230820438 FALSE 0.5 0.230820438 FALSE 0.118612833 0.6711523 0.31078474 0.5524768 397945 7078 2085606 2085607 1 76 Same + + 0.0000000 0.157788370 0 1.577884e-01 NA 1.434536 1.914784 0.8504629 - - - hypothetical protein 1.496515 2.030763 0.7037790 365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] I acetoacetyl-CoA synthase FALSE FALSE -2 TRUE 0.6656184 1.1522496 1.2525205 0.9730156 0.9720916 U 0.9007526 0.7228890 24.73295455 0.42560637 0.60989316 0.54263722 0.536699663 TRUE 0.5 0.536699663 TRUE 0.329555389 0.7228890 0.39881702 0.6120931 397945 7078 2085608 2085609 1 62 Same - - 8.3117913 0.002131557 0 5.190934e+01 286.2 1.566031 2.116828 0.7508931 10 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family [Amino acid transport and metabolism] E arginase 1.569605 2.128844 0.7650529 2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] E Ornithine cyclodeaminase E TRUE FALSE -2 TRUE 1.8887488 2.0514568 1.2286039 0.9730156 0.7675461 Y 2.4748563 0.9301903 22.65909091 0.52441699 0.92362603 0.63841925 0.930241899 TRUE 0.5 0.930241899 TRUE 0.790635660 0.9301903 0.77399627 0.8896232 397945 7078 2085610 2085611 1 100 Same + + 0.0000000 -4.126502610 0 -5.616043e+00 286.2 2.000032 2.740902 0.9401806 1522 Transcriptional regulators [Transcription] K transcriptional regulator, AsnC family 1.498127 2.020649 0.7740370 1183 Phosphatidylserine synthase [Lipid metabolism] I CDP-diacylglycerol--serineO-phosphatidyltransferase - FALSE FALSE -2 TRUE 0.6656184 0.2830060 0.3677007 0.9730156 0.7675461 N 0.6071343 0.5410127 27.60795455 0.29306705 0.13663460 0.39896721 0.061568346 FALSE 0.5 0.061568346 FALSE 0.043275860 0.5410127 0.09837733 0.4162229 397945 7078 2085611 2085612 1 338 Same + + 0.0000000 -2.484072999 0 -3.736378e+00 286.2 1.498127 2.020649 0.7740370 1183 Phosphatidylserine synthase [Lipid metabolism] I CDP-diacylglycerol--serineO-phosphatidyltransferase 1.445628 2.004391 0.7707363 850 Septum formation inhibitor [Cell division and chromosome partitioning] D septum site-determining protein MinC - FALSE FALSE -1 TRUE 0.6656184 0.3356717 0.3995306 0.9730156 0.7675461 N 0.6071343 0.5475338 38.34659091 0.04048476 0.15903726 0.06328454 0.007916081 FALSE 0.5 0.007916081 FALSE 0.005120691 0.5475338 0.10872518 0.4226248 397945 7078 2085612 2085613 1 40 Same + + 47.8716990 52.711342188 0 4.067435e+02 286.2 1.445628 2.004391 0.7707363 850 Septum formation inhibitor [Cell division and chromosome partitioning] D septum site-determining protein MinC 1.298416 1.705232 0.6467078 2894 Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] D septum site-determining protein MinD D FALSE FALSE 0 TRUE 3.2295361 2.8147837 2.7261226 0.9730156 0.7675461 Y 2.4748563 0.9815834 18.64772727 0.73864203 0.98090657 0.81901475 0.993159669 TRUE 0.5 0.993159669 TRUE 0.951043681 0.9815834 0.87299564 0.9699154 397945 7078 2085613 2085614 1 4 Same + + 101.4376931 53.206038430 0 5.782129e+02 NA 1.298416 1.705232 0.6467078 2894 Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] D septum site-determining protein MinD 1.667353 2.258736 0.9208361 851 Septum formation topological specificity factor [Cell division and chromosome partitioning] D cell division topological specificity factor MinE D FALSE FALSE 1 TRUE 3.6112848 2.9363809 2.7547719 0.9730156 0.9720916 Y 2.4748563 0.9863314 9.55681818 0.81217353 0.98589725 0.87379736 0.996702796 TRUE 0.5 0.996702796 TRUE 0.970063886 0.9863314 0.88226965 0.9776029 397945 7078 2085616 2085617 1 0 Same + + 0.0000000 0.000000000 0 0.000000e+00 286.2 1.679414 2.302703 0.8490535 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] R alpha/beta hydrolase fold 1.959872 2.771340 0.9190762 - - - peptidase M14, carboxypeptidase A FALSE FALSE 2 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6545721 7.98863636 0.83294748 0.46296638 0.88868971 0.811265802 TRUE 0.5 0.811265802 TRUE 0.663094083 0.6545721 0.28301619 0.5340669 397945 7078 2085618 2085619 1 45 Same - - 0.0000000 0.000000000 0 -9.844007e-02 210.0 1.534444 2.178233 0.8568048 655 Multimeric flavodoxin WrbA [General function prediction only] R NAD(P)H dehydrogenase (quinone) 1.408227 1.878281 0.6781534 665 Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] E D-amino-acid dehydrogenase TRUE FALSE 2 TRUE 0.6656184 0.5636237 0.8046672 0.9730156 1.1583515 U 0.9007526 0.6683097 19.69318182 0.68147058 0.49492429 0.77404643 0.677047176 TRUE 0.5 0.677047176 TRUE 0.485427388 0.6683097 0.30600885 0.5492972 397945 7078 2085620 2085621 1 101 Same + + 0.0000000 -3.038717622 0 -3.718662e+00 207.0 1.537062 2.101723 0.7697749 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family 1.666073 2.270984 0.8581121 1309 Transcriptional regulator [Transcription] K transcriptional regulator, TetR family K FALSE FALSE 2 TRUE 0.6656184 0.3359716 0.3846974 0.9730156 1.2461932 Y 2.4748563 0.7998731 27.72727273 0.28875114 0.74538390 0.39396085 0.543064365 TRUE 0.5 0.543064365 TRUE 0.317353711 0.7998731 0.53382258 0.7073986 397945 7078 2085622 2085623 1 123 Same - - 0.0000000 0.155711099 0 1.557111e-01 286.2 1.332976 1.804059 0.7880214 589 Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] T UspA domain protein 1.555871 2.081397 0.7281680 - - - metallophosphoesterase TRUE FALSE 2 TRUE 0.6656184 1.1441774 1.2378515 0.9730156 0.7675461 U 0.9007526 0.7062418 30.21590909 0.21218894 0.57671004 0.30132062 0.268450372 FALSE 0.5 0.268450372 FALSE 0.136710538 0.7062418 0.37025966 0.5925417 397945 7078 2085623 2085624 1 -3 Same - - 0.0000000 -2.539783964 0 -2.044688e+00 286.2 1.555871 2.081397 0.7281680 - - - metallophosphoesterase 1.647109 2.285115 0.8023264 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family TRUE FALSE 1 TRUE 0.6656184 0.3946027 0.3983277 0.9730156 0.7675461 U 0.9007526 0.5911348 4.56250000 0.87879330 0.29612568 0.92069418 0.753104064 TRUE 0.5 0.753104064 TRUE 0.612033851 0.5911348 0.17869959 0.4665351 397945 7078 2085626 2085627 1 267 Same - - 0.0000000 -11.865127093 0 -1.502806e+01 286.2 1.233896 1.632980 0.5210877 1274 Phosphoenolpyruvate carboxykinase (GTP) [Energy production and conversion] C Phosphoenolpyruvate carboxykinase (GTP) 1.457847 1.912788 0.7305576 603 Predicted PP-loop superfamily ATPase [General function prediction only] R exsB protein TRUE FALSE 0 TRUE 0.6656184 0.1922953 0.3233129 0.9730156 0.7675461 U 0.9007526 0.5705496 37.19318182 0.05935505 0.23401352 0.09176564 0.018912952 FALSE 0.5 0.018912952 FALSE 0.010629456 0.5705496 0.14549118 0.4455605 397945 7078 2085627 2085628 1 88 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.457847 1.912788 0.7305576 603 Predicted PP-loop superfamily ATPase [General function prediction only] R exsB protein 1.295397 1.778583 0.9249793 - - - hypothetical protein TRUE FALSE -1 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 26.31818182 0.34750396 0.50137371 0.46026772 0.348750927 FALSE 0.5 0.348750927 FALSE 0.193647401 0.6711523 0.31078474 0.5524768 397945 7078 2085628 2085629 1 123 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.295397 1.778583 0.9249793 - - - hypothetical protein 1.278059 1.682302 0.5651455 3131 Periplasmic glucans biosynthesis protein [Inorganic ion transport and metabolism] P periplasmic glucan biosynthesis protein, MdoG TRUE FALSE -2 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 30.21590909 0.21218894 0.50137371 0.30132062 0.213108936 FALSE 0.5 0.213108936 FALSE 0.108299063 0.6711523 0.31078474 0.5524768 397945 7078 2085629 2085630 1 109 Same - - 0.0000000 -3.615162355 0 -9.270044e+00 286.2 1.278059 1.682302 0.5651455 3131 Periplasmic glucans biosynthesis protein [Inorganic ion transport and metabolism] P periplasmic glucan biosynthesis protein, MdoG 1.398177 1.852066 0.6537064 1171 Threonine dehydratase [Amino acid transport and metabolism] E threonine dehydratase - TRUE FALSE -3 TRUE 0.6656184 0.2320253 0.3759517 0.9730156 0.7675461 N 0.6071343 0.5380637 28.70454545 0.25540908 0.12632493 0.35452574 0.047253615 FALSE 0.5 0.047253615 FALSE 0.034252208 0.5380637 0.09370756 0.4133415 397945 7078 2085630 2085631 1 82 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.398177 1.852066 0.6537064 1171 Threonine dehydratase [Amino acid transport and metabolism] E threonine dehydratase 2.173720 3.013435 0.9060165 - - - hypothetical protein TRUE FALSE -4 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 25.55681818 0.38524968 0.50137371 0.50085988 0.386551851 FALSE 0.5 0.386551851 FALSE 0.220324272 0.6711523 0.31078474 0.5524768 397945 7078 2085631 2085632 1 407 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.173720 3.013435 0.9060165 - - - hypothetical protein 1.590826 2.127892 0.7254545 1960 Acyl-CoA dehydrogenases [Lipid metabolism] I acyl-CoA dehydrogenase domain protein TRUE FALSE -5 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 38.86363636 0.03342963 0.50137371 0.05247347 0.033607638 FALSE 0.5 0.033607638 FALSE 0.015356142 0.6711523 0.31078474 0.5524768 397945 7078 2085632 2085633 1 82 Same - - 0.0000000 -1.875012031 0 -4.022679e+00 286.2 1.590826 2.127892 0.7254545 1960 Acyl-CoA dehydrogenases [Lipid metabolism] I acyl-CoA dehydrogenase domain protein 1.420137 1.987163 0.7782818 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family - TRUE FALSE -6 TRUE 0.6656184 0.3269837 0.4206627 0.9730156 0.7675461 N 0.6071343 0.5487311 25.55681818 0.38524968 0.16309288 0.50085988 0.108832943 FALSE 0.5 0.108832943 FALSE 0.072314922 0.5487311 0.11062850 0.4238049 397945 7078 2085634 2085635 1 164 Same + + 8.7219182 9.547060300 0 4.833453e+01 286.2 1.372147 1.897369 0.6819393 3435 Gentisate 1,2-dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q gentisate 1,2-dioxygenase 1.563973 2.093949 0.7378823 179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Q fumarylacetoacetate (FAA) hydrolase Q FALSE FALSE -6 TRUE 1.9244488 2.0048298 1.8820262 0.9730156 0.7675461 Y 2.4748563 0.9437713 33.26704545 0.15122535 0.93936923 0.22196384 0.734072383 TRUE 0.5 0.734072383 TRUE 0.415987331 0.9437713 0.79991365 0.9103354 397945 7078 2085635 2085636 1 16 Same + + 4.8916909 6.763894258 0 2.272591e+01 286.2 1.563973 2.093949 0.7378823 179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Q fumarylacetoacetate (FAA) hydrolase 1.537576 2.046148 0.7510912 625 Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] O maleylacetoacetate isomerase - FALSE FALSE -5 TRUE 1.5502816 1.7282486 1.7969711 0.9730156 0.7675461 N 0.6071343 0.8182742 13.15909091 0.82246315 0.77399447 0.88120486 0.940706460 TRUE 0.5 0.940706460 TRUE 0.858398028 0.8182742 0.56682831 0.7314478 397945 7078 2085636 2085637 1 106 Same + + 2.0883305 -3.066213348 0 2.985855e+00 286.2 1.537576 2.046148 0.7510912 625 Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] O maleylacetoacetate isomerase 1.455892 1.987539 0.7144738 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 - FALSE FALSE -4 TRUE 1.0398628 1.3758548 0.3842482 0.9730156 0.7675461 N 0.6071343 0.6606442 28.38068182 0.26604483 0.47725597 0.36725316 0.248650608 FALSE 0.5 0.248650608 FALSE 0.130690977 0.6606442 0.29316121 0.5407713 397945 7078 2085637 2085638 1 12 Same + + 0.0000000 -1.297401516 0 -1.727883e+00 286.2 1.455892 1.987539 0.7144738 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 1.464820 1.966124 0.7292178 2207 AraC-type DNA-binding domain-containing proteins [Transcription] K transcriptional regulator, AraC family - FALSE FALSE -3 TRUE 0.6656184 0.4163435 0.4379743 0.9730156 0.7675461 N 0.6071343 0.5566056 11.99431818 0.81628694 0.18933009 0.87676598 0.509254418 TRUE 0.5 0.509254418 TRUE 0.384298067 0.5566056 0.12317132 0.4316013 397945 7078 2085639 2085640 1 -3 Same - - 0.0000000 0.000000000 0 -2.671757e+00 286.2 1.555262 2.070743 0.7275755 2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] E Ornithine cyclodeaminase 1.640973 2.233726 0.7702189 498 Threonine synthase [Amino acid transport and metabolism] E Pyridoxal-5'-phosphate-dependent enzyme, beta subunit E TRUE FALSE -3 TRUE 0.6656184 0.3706058 0.8046672 0.9730156 0.7675461 Y 2.4748563 0.7970349 4.56250000 0.87879330 0.74085343 0.92069418 0.953975378 TRUE 0.5 0.953975378 TRUE 0.890534220 0.7970349 0.52875753 0.7037347 397945 7078 2085641 2085642 1 104 Same + + 0.0000000 -0.387446603 0 -8.263742e-01 NA 1.458909 1.914043 0.7113806 2964 Uncharacterized protein conserved in bacteria [Function unknown] S YheO domain protein 1.503624 2.052545 0.7511677 - - - alpha/beta hydrolase fold FALSE FALSE -3 TRUE 0.6656184 0.4808984 0.4992551 0.9730156 0.9720916 U 0.9007526 0.6231395 28.08522727 0.27611176 0.38454429 0.37917128 0.192455169 FALSE 0.5 0.192455169 FALSE 0.102773236 0.6231395 0.23095043 0.5000442 397945 7078 2085642 2085643 1 42 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.503624 2.052545 0.7511677 - - - alpha/beta hydrolase fold 1.974660 2.736982 0.8867042 3047 Outer membrane protein W [Cell envelope biogenesis, outer membrane] M OmpW family protein FALSE FALSE -2 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 18.97727273 0.72085102 0.50137371 0.80525233 0.721955371 TRUE 0.5 0.721955371 TRUE 0.537985104 0.6711523 0.31078474 0.5524768 397945 7078 2085643 2085644 1 675 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.974660 2.736982 0.8867042 3047 Outer membrane protein W [Cell envelope biogenesis, outer membrane] M OmpW family protein 2.413398 3.242119 0.9787399 - - - DNA binding domain, excisionase family FALSE FALSE -1 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 39.68181818 0.02420201 0.50137371 0.03819689 0.024332120 FALSE 0.5 0.024332120 FALSE 0.011060282 0.6711523 0.31078474 0.5524768 397945 7078 2085644 2085645 1 28 Same + + 0.0000000 0.000000000 0 -4.445176e-02 286.2 2.413398 3.242119 0.9787399 - - - DNA binding domain, excisionase family 2.188460 2.885139 0.8521117 553 Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] KL helicase domain protein FALSE FALSE 0 TRUE 0.6656184 0.5702694 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6366138 16.06250000 0.82021893 0.41911017 0.87959448 0.766992105 TRUE 0.5 0.766992105 TRUE 0.607328544 0.6366138 0.25317786 0.5144906 397945 7078 2085645 2085646 1 -3 Same + + 28.7241380 1.838845919 0 4.154459e+01 NA 2.188460 2.885139 0.8521117 553 Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] KL helicase domain protein 2.541215 3.451798 0.9298180 - - - hypothetical protein FALSE FALSE 1 TRUE 2.9016482 1.9288339 1.5045473 0.9730156 0.9720916 U 0.9007526 0.9126718 4.56250000 0.87879330 0.90262639 0.92069418 0.985339159 TRUE 0.5 0.985339159 TRUE 0.953967489 0.9126718 0.74081894 0.8634193 397945 7078 2085646 2085647 1 23 Same + + 12.5826443 0.205649856 0 1.488339e+01 NA 2.541215 3.451798 0.9298180 - - - hypothetical protein 4.822850 6.378148 1.0938034 2189 Adenine specific DNA methylase Mod [DNA replication, recombination, and repair] L Site-specific DNA-methyltransferase (adenine-specific) FALSE FALSE 2 TRUE 2.2501507 1.6437040 1.2704855 0.9730156 0.9720916 U 0.9007526 0.8663974 14.93181818 0.83677964 0.84307241 0.89140985 0.964964448 TRUE 0.5 0.964964448 TRUE 0.906657682 0.8663974 0.65453457 0.7968554 397945 7078 2085647 2085648 1 3 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 4.822850 6.378148 1.0938034 2189 Adenine specific DNA methylase Mod [DNA replication, recombination, and repair] L Site-specific DNA-methyltransferase (adenine-specific) 2.616167 3.442392 0.9282637 - - - hypothetical protein FALSE FALSE 3 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 9.19318182 0.81615233 0.50137371 0.87666899 0.816975385 TRUE 0.5 0.816975385 TRUE 0.666865123 0.6711523 0.31078474 0.5524768 397945 7078 2085648 2085649 1 15 Same + + 22.7781777 0.000000000 0 4.446510e+01 NA 2.616167 3.442392 0.9282637 - - - hypothetical protein 2.526984 3.317877 0.9044404 2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 [General function prediction only] R Appr-1-p processing domain protein FALSE FALSE 4 TRUE 2.6882632 1.9637020 0.8046672 0.9730156 0.9720916 U 0.9007526 0.8819296 12.86363636 0.81888771 0.86375876 0.87863786 0.966290866 TRUE 0.5 0.966290866 TRUE 0.907014673 0.8819296 0.68328013 0.8187813 397945 7078 2085649 2085650 1 -3 Same + + 0.0000000 -1.087051466 0 -1.087051e+00 NA 2.526984 3.317877 0.9044404 2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 [General function prediction only] R Appr-1-p processing domain protein 1.879483 2.442035 0.7359953 3587 Restriction endonuclease [Defense mechanisms] V type III restriction enzyme, res subunit FALSE FALSE 5 TRUE 0.6656184 0.4508776 0.4474661 0.9730156 0.9720916 U 0.9007526 0.6168533 4.56250000 0.87879330 0.36790154 0.92069418 0.808427167 TRUE 0.5 0.808427167 TRUE 0.672395132 0.6168533 0.22062732 0.4933741 397945 7078 2085652 2085653 1 23 Same + + 8.7540958 -7.574128939 0 4.184111e+00 81.0 1.697746 2.323047 0.7878163 543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion] HC Oxidoreductase FAD-binding domain protein 1.401662 1.833303 0.6354982 4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only] PR Rieske (2Fe-2S) domain protein - FALSE FALSE 6 TRUE 1.9265614 1.4254853 0.3360022 0.9730156 2.0299587 N 0.6071343 0.8246680 14.93181818 0.83677964 0.78363678 0.89140985 0.948896493 TRUE 0.5 0.948896493 TRUE 0.875503740 0.8246680 0.57836477 0.7399255 397945 7078 2085653 2085654 1 5 Same + + 11.1835394 40.193766309 0 5.706365e+01 19.0 1.401662 1.833303 0.6354982 4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only] PR Rieske (2Fe-2S) domain protein 1.270120 1.671204 0.7157058 5517 Small subunit of phenylpropionate dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q aromatic-ring-hydroxylating dioxygenase, beta subunit - FALSE FALSE 7 TRUE 2.1247111 2.0968743 2.2380493 0.9730156 2.6907240 N 0.6071343 0.9392681 9.92613636 0.80891491 0.93419962 0.87143863 0.983633864 TRUE 0.5 0.983633864 TRUE 0.941351770 0.9392681 0.79130086 0.9034286 397945 7078 2085654 2085655 1 12 Same + + 4.6870831 26.977526738 0 2.736010e+01 210.0 1.270120 1.671204 0.7157058 5517 Small subunit of phenylpropionate dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Q aromatic-ring-hydroxylating dioxygenase, beta subunit 1.476618 1.923186 0.8198974 2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only] PR Rieske (2Fe-2S) domain protein - FALSE FALSE 8 TRUE 1.5190635 1.7734501 2.1060914 0.9730156 1.1583515 N 0.6071343 0.8522023 11.99431818 0.81628694 0.82350737 0.87676598 0.953985164 TRUE 0.5 0.953985164 TRUE 0.882567518 0.8522023 0.62845184 0.7771719 397945 7078 2085656 2085657 1 338 Same - - 0.0000000 0.000000000 0 -6.069239e-01 286.2 1.658410 2.245165 0.7645406 840 Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] NT methyl-accepting chemotaxis sensory transducer 1.530627 2.078604 0.7548157 - - - major facilitator superfamily MFS_1 TRUE FALSE 8 TRUE 0.6656184 0.4999700 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6318993 38.34659091 0.04048476 0.40718348 0.06328454 0.028164517 FALSE 0.5 0.028164517 FALSE 0.013534564 0.6318993 0.24538505 0.5094126 397945 7078 2085657 2085658 1 143 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.530627 2.078604 0.7548157 - - - major facilitator superfamily MFS_1 1.393322 1.884719 0.7671123 - - - hypothetical protein TRUE FALSE 7 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 31.73863636 0.18969914 0.50137371 0.27265332 0.190545212 FALSE 0.5 0.190545212 FALSE 0.095485894 0.6711523 0.31078474 0.5524768 397945 7078 2085658 2085659 1 36 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.393322 1.884719 0.7671123 - - - hypothetical protein 1.491038 2.115297 0.7629076 - - - putative secreted protein TRUE FALSE 6 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 17.90909091 0.77312024 0.50137371 0.84511352 0.774082616 TRUE 0.5 0.774082616 TRUE 0.605768902 0.6711523 0.31078474 0.5524768 397945 7078 2085659 2085660 1 162 Same - - 4.8042162 5.499471242 0 1.533623e+01 NA 1.491038 2.115297 0.7629076 - - - putative secreted protein 1.361687 1.854964 0.6621663 2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] T two component, sigma54 specific, transcriptional regulator, Fis family TRUE FALSE 5 TRUE 1.5291197 1.6511550 1.7487474 0.9730156 0.9720916 U 0.9007526 0.8443554 33.13068182 0.15488080 0.81240982 0.22687215 0.442486509 FALSE 0.5 0.442486509 FALSE 0.225796715 0.8443554 0.61411020 0.7664333 397945 7078 2085660 2085661 1 -15 Same - - 4.8042162 8.070857992 0 1.790761e+01 286.2 1.361687 1.854964 0.6621663 2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] T two component, sigma54 specific, transcriptional regulator, Fis family 1.426691 1.954135 0.6941347 642 Signal transduction histidine kinase [Signal transduction mechanisms] T integral membrane sensor signal transduction histidine kinase T TRUE FALSE 4 TRUE 1.5291197 1.6802986 1.8344122 0.9730156 0.7675461 Y 2.4748563 0.9255245 0.51136364 0.90613999 0.91811072 0.93924081 0.990845737 TRUE 0.5 0.990845737 TRUE 0.969183817 0.9255245 0.76513205 0.8825882 397945 7078 2085661 2085662 1 77 Same - - 0.0000000 0.000000000 0 -8.044506e-01 286.2 1.426691 1.954135 0.6941347 642 Signal transduction histidine kinase [Signal transduction mechanisms] T integral membrane sensor signal transduction histidine kinase 1.435749 1.917861 0.6897758 646 Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism] E Methionine synthase - TRUE FALSE 3 TRUE 0.6656184 0.4820072 0.8046672 0.9730156 0.7675461 N 0.6071343 0.5923894 24.92045455 0.41667572 0.29977161 0.53353187 0.234186538 FALSE 0.5 0.234186538 FALSE 0.136128987 0.5923894 0.18073354 0.4678278 397945 7078 2085662 2085663 1 154 Same - - 0.0000000 -0.062173809 0 -4.758593e-01 286.2 1.435749 1.917861 0.6897758 646 Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism] E Methionine synthase 1.441821 1.964552 0.7292950 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family - TRUE FALSE 2 TRUE 0.6656184 0.5094981 0.5153827 0.9730156 0.7675461 N 0.6071343 0.5698496 32.51136364 0.17220007 0.23182264 0.24986163 0.059069057 FALSE 0.5 0.059069057 FALSE 0.033908464 0.5698496 0.14436743 0.4448551 397945 7078 2085663 2085664 1 27 Same - - 0.0000000 0.926367943 0 2.664762e-01 286.2 1.441821 1.964552 0.7292950 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family 1.409156 1.861347 0.6570441 1960 Acyl-CoA dehydrogenases [Lipid metabolism] I acyl-CoA dehydrogenase domain protein - TRUE FALSE 1 TRUE 0.6656184 1.1663476 1.3761919 0.9730156 0.7675461 N 0.6071343 0.6836014 15.83522727 0.82449435 0.52898677 0.88265988 0.840663924 TRUE 0.5 0.840663924 TRUE 0.699922624 0.6836014 0.33177462 0.5665168 397945 7078 2085664 2085665 1 0 Same - - 0.0000000 -0.254042146 0 -4.019961e-01 NA 1.409156 1.861347 0.6570441 1960 Acyl-CoA dehydrogenases [Lipid metabolism] I acyl-CoA dehydrogenase domain protein 1.254119 1.720212 0.7471993 1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] S Cupin 2, conserved barrel domain protein TRUE FALSE 0 TRUE 0.6656184 0.5205950 0.5090559 0.9730156 0.9720916 U 0.9007526 0.6266282 7.98863636 0.83294748 0.39363655 0.88868971 0.763977427 TRUE 0.5 0.763977427 TRUE 0.607248779 0.6266282 0.23669232 0.5037650 397945 7078 2085665 2085666 1 -3 Same - - 0.0000000 0.174151213 0 1.215075e-01 NA 1.254119 1.720212 0.7471993 1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] S Cupin 2, conserved barrel domain protein 1.825251 2.479598 0.7845267 1804 Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion] C L-carnitine dehydratase/bile acid-inducible protein F TRUE FALSE -1 TRUE 0.6656184 1.1408935 1.2674634 0.9730156 0.9720916 U 0.9007526 0.7232717 4.56250000 0.87879330 0.61063810 0.92069418 0.919164401 TRUE 0.5 0.919164401 TRUE 0.828268358 0.7232717 0.39947618 0.6125469 397945 7078 2085666 2085667 1 29 Same - - 0.0000000 0.000000000 0 0.000000e+00 286.2 1.825251 2.479598 0.7845267 1804 Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion] C L-carnitine dehydratase/bile acid-inducible protein F 2.198187 2.932893 0.8674436 - - - Integrase, catalytic region TRUE FALSE -2 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6545721 16.27840909 0.81583113 0.46296638 0.87643751 0.792481400 TRUE 0.5 0.792481400 TRUE 0.636176030 0.6545721 0.28301619 0.5340669 397945 7078 2085667 2085668 1 201 Same - - 0.0000000 0.000000000 0 0.000000e+00 286.2 2.198187 2.932893 0.8674436 - - - Integrase, catalytic region 1.499291 2.067214 0.7124989 3181 Uncharacterized protein conserved in bacteria [Function unknown] S uncharacterized protein UPF0065 TRUE FALSE -3 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6545721 35.19318182 0.10189785 0.46296638 0.15374194 0.089096314 FALSE 0.5 0.089096314 FALSE 0.042866095 0.6545721 0.28301619 0.5340669 397945 7078 2085670 2085671 1 47 Same - - 0.0000000 0.000000000 0 0.000000e+00 7.0 1.451034 1.900435 0.6621012 2367 Beta-lactamase class A [Defense mechanisms] V beta-lactamase 1.886223 2.634672 0.8577188 2367 Beta-lactamase class A [Defense mechanisms] V beta-lactamase V TRUE FALSE -4 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 3.0957546 Y 2.4748563 0.9128310 20.10227273 0.66128607 0.90282085 0.75764196 0.947747412 TRUE 0.5 0.947747412 TRUE 0.848234963 0.9128310 0.74111915 0.8636549 397945 7078 2085672 2085673 1 12 Same + + 0.0000000 -0.860859642 0 -8.608596e-01 NA 1.625769 2.285192 0.8216748 - - - hypothetical protein 1.462068 1.958331 0.6538050 1199 Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] KL helicase c2 FALSE FALSE -4 TRUE 0.6656184 0.4761535 0.4694521 0.9730156 0.9720916 U 0.9007526 0.6203804 11.99431818 0.81628694 0.37728125 0.87676598 0.729144571 TRUE 0.5 0.729144571 TRUE 0.565307313 0.6203804 0.22641593 0.4971113 397945 7078 2085673 2085674 1 148 Same + + 0.0000000 0.000000000 0 0.000000e+00 286.2 1.462068 1.958331 0.6538050 1199 Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] KL helicase c2 1.667916 2.309441 0.8170088 - - - hypothetical protein FALSE FALSE -3 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6545721 32.09090909 0.18303353 0.46296638 0.26402263 0.161876071 FALSE 0.5 0.161876071 FALSE 0.081250402 0.6545721 0.28301619 0.5340669 397945 7078 2085674 2085675 1 119 Same + + 0.0000000 -0.909954913 0 -9.099549e-01 NA 1.667916 2.309441 0.8170088 - - - hypothetical protein 1.770071 2.524638 0.8707225 - - - putative Fe-S oxidoreductase FALSE FALSE -2 TRUE 0.6656184 0.4717351 0.4651709 0.9730156 0.9720916 U 0.9007526 0.6197289 29.89204545 0.22020304 0.37555668 0.31137059 0.145177749 FALSE 0.5 0.145177749 FALSE 0.075909844 0.6197289 0.22534596 0.4964199 397945 7078 2085676 2085677 1 136 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.215560 1.596294 0.5279641 334 Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] E Glu/Leu/Phe/Val dehydrogenase, C terminal 1.671477 2.276644 0.7695260 - - - hypothetical protein TRUE FALSE -2 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 31.21022727 0.19715159 0.50137371 0.28222959 0.198022778 FALSE 0.5 0.198022778 FALSE 0.099692485 0.6711523 0.31078474 0.5524768 397945 7078 2085677 2085678 1 181 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.671477 2.276644 0.7695260 - - - hypothetical protein 1.224550 1.639563 0.5901986 2326 Uncharacterized conserved protein [Function unknown] S protein of unknown function DUF344 TRUE FALSE -3 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 34.27272727 0.12517386 0.50137371 0.18640251 0.125776818 FALSE 0.5 0.125776818 FALSE 0.060609786 0.6711523 0.31078474 0.5524768 397945 7078 2085678 2085679 1 98 Same - - 0.0000000 -5.563341046 0 -7.366396e+00 NA 1.224550 1.639563 0.5901986 2326 Uncharacterized conserved protein [Function unknown] S protein of unknown function DUF344 1.372732 1.838596 0.6501842 154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] J Amidase TRUE FALSE -4 TRUE 0.6656184 0.2558174 0.3501999 0.9730156 0.9720916 U 0.9007526 0.5953215 27.40909091 0.30036889 0.30823264 0.40738705 0.160577593 FALSE 0.5 0.160577593 FALSE 0.089064045 0.5953215 0.18549162 0.4708556 397945 7078 2085679 2085680 1 107 Same - - 0.0000000 -0.405465108 0 -9.842698e-01 286.2 1.372732 1.838596 0.6501842 154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] J Amidase 1.324582 1.770107 0.5917851 4774 Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism] P TonB-dependent siderophore receptor - TRUE FALSE -5 TRUE 0.6656184 0.4616723 0.4953878 0.9730156 0.7675461 N 0.6071343 0.5647494 28.49431818 0.26226459 0.21569500 0.36274559 0.089060225 FALSE 0.5 0.089060225 FALSE 0.053074011 0.5647494 0.13618996 0.4397300 397945 7078 2085680 2085681 1 249 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.324582 1.770107 0.5917851 4774 Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism] P TonB-dependent siderophore receptor 1.591362 2.160640 0.8632989 - - - hypothetical protein TRUE FALSE -6 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 36.64204545 0.06979545 0.50137371 0.10725693 0.070153038 FALSE 0.5 0.070153038 FALSE 0.032726731 0.6711523 0.31078474 0.5524768 397945 7078 2085681 2085682 1 -3 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.591362 2.160640 0.8632989 - - - hypothetical protein 1.849370 2.481450 0.8838308 - - - hypothetical protein TRUE FALSE -7 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 4.56250000 0.87879330 0.50137371 0.92069418 0.879377366 TRUE 0.5 0.879377366 TRUE 0.765773748 0.6711523 0.31078474 0.5524768 397945 7078 2085682 2085683 1 153 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.849370 2.481450 0.8838308 - - - hypothetical protein 1.908967 2.623426 0.8516793 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family TRUE FALSE -8 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 32.47159091 0.17336384 0.50137371 0.25139087 0.174152715 FALSE 0.5 0.174152715 FALSE 0.086398416 0.6711523 0.31078474 0.5524768 397945 7078 2085685 2085686 1 0 Same - - 0.0000000 -3.603639365 0 -3.603639e+00 NA 1.506707 2.125082 0.8278749 - - - hypothetical protein 1.572129 2.155274 0.7608257 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family TRUE FALSE -9 TRUE 0.6656184 0.3395716 0.3764564 0.9730156 0.9720916 U 0.9007526 0.6033276 7.98863636 0.83294748 0.33091660 0.88868971 0.711487614 TRUE 0.5 0.711487614 TRUE 0.552571539 0.6033276 0.19851588 0.4791699 397945 7078 2085687 2085688 1 64 Same + + 1.3862944 -2.993770987 0 2.713089e+00 286.2 1.356776 1.830954 0.6581557 4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only] MR muconate and chloromuconate cycloisomerase 1.353155 1.867391 0.6836664 3181 Uncharacterized protein conserved in bacteria [Function unknown] S uncharacterized protein UPF0065 FALSE FALSE -9 TRUE 0.8747388 1.3579921 0.3863533 0.9730156 0.7675461 U 0.9007526 0.6777874 22.93181818 0.51088888 0.51621721 0.62582017 0.527086954 TRUE 0.5 0.527086954 TRUE 0.331539427 0.6777874 0.32195692 0.5599364 397945 7078 2085688 2085689 1 130 Same + + 0.0000000 0.000000000 0 0.000000e+00 286.2 1.353155 1.867391 0.6836664 3181 Uncharacterized protein conserved in bacteria [Function unknown] S uncharacterized protein UPF0065 3.099118 4.153045 1.0026377 - - - hypothetical protein FALSE FALSE -8 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6545721 30.75000000 0.20308816 0.46296638 0.28980326 0.180123632 FALSE 0.5 0.180123632 FALSE 0.091400537 0.6545721 0.28301619 0.5340669 397945 7078 2085690 2085691 1 47 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.733848 3.700606 1.0103870 - - - hypothetical protein NA NA NA TRUE FALSE -8 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 20.10227273 0.66128607 0.50137371 0.75764196 0.662515753 TRUE 0.5 0.662515753 TRUE 0.468187421 0.6711523 0.31078474 0.5524768 397945 7078 2085691 2085692 1 47 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 1.520521 2.088001 0.7223813 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family TRUE FALSE -9 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 20.10227273 0.66128607 0.50137371 0.75764196 0.662515753 TRUE 0.5 0.662515753 TRUE 0.468187421 0.6711523 0.31078474 0.5524768 397945 7078 2085693 2085694 1 0 Same + + 0.0000000 0.000000000 0 -1.950095e-01 286.2 1.403665 1.906767 0.6891625 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET extracellular solute-binding protein, family 3 1.377744 1.846799 0.6426293 520 Selenocysteine lyase [Amino acid transport and metabolism] E aminotransferase, class V E FALSE FALSE -9 TRUE 0.6656184 0.5485998 0.8046672 0.9730156 0.7675461 Y 2.4748563 0.8052323 7.98863636 0.83294748 0.75385149 0.88868971 0.938539063 TRUE 0.5 0.938539063 TRUE 0.855785999 0.8052323 0.54340540 0.7143498 397945 7078 2085695 2085696 1 -3 Same - - 3.5935693 -2.354666026 0 -4.554100e+00 286.2 1.558628 2.093999 0.7985093 3194 Ureidoglycolate hydrolase [Nucleotide transport and metabolism] F Ureidoglycolate hydrolase 1.534845 2.020284 0.7570929 1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] E ABC transporter-related protein - TRUE FALSE -9 TRUE 1.3723794 0.3144240 0.4025261 0.9730156 0.7675461 N 0.6071343 0.6284629 4.56250000 0.87879330 0.39837760 0.92069418 0.827615699 TRUE 0.5 0.827615699 TRUE 0.695680638 0.6284629 0.23971561 0.5057272 397945 7078 2085696 2085697 1 -13 Same - - 10.3049537 10.766622354 0 7.308896e+01 286.2 1.534845 2.020284 0.7570929 1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] E ABC transporter-related protein 1.512265 2.047631 0.7976387 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E polar amino acid ABC transporter, inner membrane subunit E TRUE FALSE -10 TRUE 2.0580956 2.1971647 1.9163570 0.9730156 0.7675461 Y 2.4748563 0.9503717 0.65340909 0.90534389 0.94685804 0.93870647 0.994166263 TRUE 0.5 0.994166263 TRUE 0.976451819 0.9503717 0.81257240 0.9205302 397945 7078 2085697 2085698 1 -3 Same - - 12.6075388 15.812360768 0 8.771886e+01 32.0 1.512265 2.047631 0.7976387 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E polar amino acid ABC transporter, inner membrane subunit 1.411394 1.857803 0.7156845 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E polar amino acid ABC transporter, inner membrane subunit E TRUE FALSE -11 TRUE 2.2640948 2.2614063 2.0221106 0.9730156 2.5144776 Y 2.4748563 0.9768078 4.56250000 0.87879330 0.97583790 0.92069418 0.996596573 TRUE 0.5 0.996596573 TRUE 0.978696123 0.9768078 0.86368971 0.9622306 397945 7078 2085698 2085699 1 57 Same - - 12.3843952 7.811093965 0 7.971069e+01 235.0 1.411394 1.857803 0.7156845 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E polar amino acid ABC transporter, inner membrane subunit 1.277425 1.730868 0.6434549 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET extracellular solute-binding protein, family 3 E TRUE FALSE -12 TRUE 2.2247193 2.2221160 1.8279679 0.9730156 1.0289163 Y 2.4748563 0.9570475 21.99431818 0.55937671 0.95432737 0.67026789 0.963671235 TRUE 0.5 0.963671235 TRUE 0.857187904 0.9570475 0.82541788 0.9309285 397945 7078 2085699 2085700 1 -3 Same - - 2.9581944 -4.714066420 0 3.563230e+00 286.2 1.277425 1.730868 0.6434549 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET extracellular solute-binding protein, family 3 1.573701 2.200688 0.7577029 2186 Transcriptional regulators [Transcription] K GntR domain protein - TRUE FALSE -13 TRUE 1.2681804 1.4009649 0.3612012 0.9730156 0.7675461 N 0.6071343 0.6846569 4.56250000 0.87879330 0.53128176 0.92069418 0.891518160 TRUE 0.5 0.891518160 TRUE 0.783965031 0.6846569 0.33355981 0.5677159 397945 7078 2085701 2085702 1 198 Same + + 0.0000000 -2.029712921 0 -2.180536e+00 NA 1.351440 1.767922 0.6839013 - - - putative lipoprotein 1.245202 1.640753 0.5183111 1410 Methionine synthase I, cobalamin-binding domain [Amino acid transport and metabolism] E methionine synthase FALSE FALSE -13 TRUE 0.6656184 0.3912499 0.4094783 0.9730156 0.9720916 U 0.9007526 0.6096328 35.06818182 0.10500849 0.34836200 0.15815653 0.059021418 FALSE 0.5 0.059021418 FALSE 0.030034695 0.6096328 0.20880658 0.4857665 397945 7078 2085702 2085703 1 166 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.245202 1.640753 0.5183111 1410 Methionine synthase I, cobalamin-binding domain [Amino acid transport and metabolism] E methionine synthase NA NA NA FALSE FALSE -12 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 33.39204545 0.14791077 0.50137371 0.21749610 0.148604642 FALSE 0.5 0.148604642 FALSE 0.072592249 0.6711523 0.31078474 0.5524768 397945 7078 2085705 2085706 1 288 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.530385 2.071496 0.6933275 1626 Neutral trehalase [Carbohydrate transport and metabolism] G Alpha,alpha-trehalase 3.110288 4.362419 1.0291849 - - - hypothetical protein FALSE FALSE -11 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 37.63068182 0.05173245 0.50137371 0.08033623 0.052002668 FALSE 0.5 0.052002668 FALSE 0.024009468 0.6711523 0.31078474 0.5524768 397945 7078 2085706 2085707 1 68 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 3.110288 4.362419 1.0291849 - - - hypothetical protein 1.347922 1.832965 0.6325075 3511 Phospholipase C [Cell envelope biogenesis, outer membrane] M Phospholipase C FALSE FALSE -10 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 23.51704545 0.48273948 0.50137371 0.59909473 0.484111680 FALSE 0.5 0.484111680 FALSE 0.296186802 0.6711523 0.31078474 0.5524768 397945 7078 2085712 2085713 1 234 Same - - 0.0000000 -7.949270263 0 -1.363308e+01 286.2 1.211243 1.615667 0.6231728 1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] C Ferredoxin--NADP(+) reductase 1.589567 2.144475 0.7663208 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family - TRUE FALSE -10 TRUE 0.6656184 0.1984312 0.3346133 0.9730156 0.7675461 N 0.6071343 0.5320728 36.21022727 0.07863926 0.10502941 0.12023396 0.009917071 FALSE 0.5 0.009917071 FALSE 0.007790233 0.5320728 0.08424010 0.4075142 397945 7078 2085715 2085716 1 151 Same - - 0.0000000 0.000000000 0 0.000000e+00 286.2 1.606566 2.256817 0.7843725 840 Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] NT methyl-accepting chemotaxis sensory transducer 1.368529 1.866313 0.6875644 3181 Uncharacterized protein conserved in bacteria [Function unknown] S uncharacterized protein UPF0065 TRUE FALSE -11 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 U 0.9007526 0.6545721 32.35227273 0.17671200 0.46296638 0.25577968 0.156145602 FALSE 0.5 0.156145602 FALSE 0.078108118 0.6545721 0.28301619 0.5340669 397945 7078 2085717 2085718 1 31 Same + + 11.8346060 32.423014082 0 1.500408e+02 286.2 1.752210 2.340159 0.7721776 4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] T histidine kinase 1.454292 1.959217 0.6880564 2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] T two component, sigma54 specific, transcriptional regulator, Fis family T FALSE FALSE -11 TRUE 2.1811971 2.4326130 2.1477872 0.9730156 0.7675461 Y 2.4748563 0.9593023 16.70454545 0.80648266 0.95682662 0.86967399 0.989288981 TRUE 0.5 0.989288981 TRUE 0.953081348 0.9593023 0.82976599 0.9344605 397945 7078 2085720 2085721 1 53 Same + + 4.2551018 6.022851377 0 7.070645e+00 NA 1.561414 2.087095 0.7678958 - - - hypothetical protein 1.581075 2.010698 0.8072592 347 Nitrogen regulatory protein PII [Amino acid transport and metabolism] E nitrogen regulatory protein P-II FALSE FALSE -10 TRUE 1.4658399 1.5175676 1.7744945 0.9730156 0.9720916 U 0.9007526 0.8362908 21.21022727 0.60376389 0.80078718 0.70928975 0.859651021 TRUE 0.5 0.859651021 TRUE 0.695137774 0.8362908 0.59942676 0.7555003 397945 7078 2085721 2085722 1 269 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.581075 2.010698 0.8072592 347 Nitrogen regulatory protein PII [Amino acid transport and metabolism] E nitrogen regulatory protein P-II NA NA NA FALSE FALSE -9 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 37.21590909 0.05894467 0.50137371 0.09115289 0.059250209 FALSE 0.5 0.059250209 FALSE 0.027468679 0.6711523 0.31078474 0.5524768 397945 7078 2085722 2085723 1 526 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA NA NA NA 1.576445 2.167273 0.7732254 3386 Gluconolactonase [Carbohydrate transport and metabolism] G SMP-30/Gluconolaconase/LRE domain protein FALSE FALSE -8 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 39.31818182 0.02801310 0.50137371 0.04411212 0.028163100 FALSE 0.5 0.028163100 FALSE 0.012829149 0.6711523 0.31078474 0.5524768 397945 7078 2085724 2085725 1 -3 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.679254 2.234762 0.8825800 - - - hypothetical protein 2.063093 2.805305 0.9076064 - - - hypothetical protein TRUE FALSE -8 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 4.56250000 0.87879330 0.50137371 0.92069418 0.879377366 TRUE 0.5 0.879377366 TRUE 0.765773748 0.6711523 0.31078474 0.5524768 397945 7078 2085725 2085726 1 17 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.063093 2.805305 0.9076064 - - - hypothetical protein 4.010527 5.326223 0.9531364 - - - hypothetical protein TRUE FALSE -9 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 13.41477273 0.82609280 0.50137371 0.88380323 0.826880796 TRUE 0.5 0.826880796 TRUE 0.681729694 0.6711523 0.31078474 0.5524768 397945 7078 2085726 2085727 1 946 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 4.010527 5.326223 0.9531364 - - - hypothetical protein 7.781860 9.953506 1.0405779 - - - hypothetical protein TRUE FALSE -10 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 39.94318182 0.02173823 0.50137371 0.03435858 0.021855388 FALSE 0.5 0.021855388 FALSE 0.009920735 0.6711523 0.31078474 0.5524768 397945 7078 2085727 2085728 1 76 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 7.781860 9.953506 1.0405779 - - - hypothetical protein 1.443876 1.899735 0.8094324 4104 Uncharacterized conserved protein [Function unknown] S PAAR repeat-containing protein TRUE FALSE -11 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 24.73295455 0.42560637 0.50137371 0.54263722 0.426950218 FALSE 0.5 0.426950218 FALSE 0.250442605 0.6711523 0.31078474 0.5524768 397945 7078 2085728 2085729 1 46 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.443876 1.899735 0.8094324 4104 Uncharacterized conserved protein [Function unknown] S PAAR repeat-containing protein 1.568672 2.077089 0.6822546 3501 Uncharacterized protein conserved in bacteria [Function unknown] S Rhs element Vgr protein TRUE FALSE -12 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 19.89772727 0.67099469 0.50137371 0.76556782 0.672206595 TRUE 0.5 0.672206595 TRUE 0.479070793 0.6711523 0.31078474 0.5524768 397945 7078 2085730 2085731 1 9 Same + + 0.0000000 -1.153583861 0 -3.581028e+00 NA 1.964486 2.712821 0.8763281 277 FAD/FMN-containing dehydrogenases [Energy production and conversion] C FAD linked oxidase domain protein 1.493185 2.025055 0.7540118 3619 Predicted membrane protein [Function unknown] S protein of unknown function DUF1275 FALSE FALSE -12 TRUE 0.6656184 0.3407722 0.4430147 0.9730156 0.9720916 U 0.9007526 0.6089341 11.12500000 0.81130672 0.34644647 0.87317053 0.695048151 TRUE 0.5 0.695048151 TRUE 0.529830375 0.6089341 0.20766468 0.4850333 397945 7078 2085731 2085732 1 46 Same + + 0.0000000 -1.153583861 0 -4.110479e+00 NA 1.493185 2.025055 0.7540118 3619 Predicted membrane protein [Function unknown] S protein of unknown function DUF1275 1.576733 2.098112 0.7072147 247 Fe-S oxidoreductase [Energy production and conversion] C protein of unknown function DUF224, cysteine-rich region domain protein FALSE FALSE -11 TRUE 0.6656184 0.3236923 0.4430147 0.9730156 0.9720916 U 0.9007526 0.6077576 19.89772727 0.67099469 0.34321131 0.76556782 0.515912458 TRUE 0.5 0.515912458 TRUE 0.345677838 0.6077576 0.20574289 0.4838001 397945 7078 2085732 2085733 1 163 Same + + 0.0000000 -1.424309916 0 -1.424310e+00 NA 1.576733 2.098112 0.7072147 247 Fe-S oxidoreductase [Energy production and conversion] C protein of unknown function DUF224, cysteine-rich region domain protein 1.808918 2.470392 0.8622753 - - - hypothetical protein FALSE FALSE -10 TRUE 0.6656184 0.4292919 0.4329347 0.9730156 0.9720916 U 0.9007526 0.6141810 33.19886364 0.15304753 0.36072349 0.22441301 0.092530516 FALSE 0.5 0.092530516 FALSE 0.047490820 0.6141810 0.21624792 0.4905518 397945 7078 2085733 2085734 1 246 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.808918 2.470392 0.8622753 - - - hypothetical protein 2.163199 2.865294 0.9608242 - - - hypothetical protein FALSE FALSE -9 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 36.58522727 0.07092547 0.50137371 0.10892246 0.071288409 FALSE 0.5 0.071288409 FALSE 0.033278064 0.6711523 0.31078474 0.5524768 397945 7078 2085734 2085735 1 26 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.163199 2.865294 0.9608242 - - - hypothetical protein 2.023260 2.663893 0.8829709 2378 Predicted transcriptional regulator [Transcription] K Helix-turn-helix, type 11 domain protein FALSE FALSE -8 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 15.60227273 0.82844379 0.50137371 0.88548220 0.829223329 TRUE 0.5 0.829223329 TRUE 0.685288782 0.6711523 0.31078474 0.5524768 397945 7078 2085735 2085736 1 256 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 2.023260 2.663893 0.8829709 2378 Predicted transcriptional regulator [Transcription] K Helix-turn-helix, type 11 domain protein 1.859419 2.463629 0.8052620 - - - hypothetical protein FALSE FALSE -7 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 36.88068182 0.06515933 0.50137371 0.10040104 0.065494842 FALSE 0.5 0.065494842 FALSE 0.030472219 0.6711523 0.31078474 0.5524768 397945 7078 2085736 2085737 1 13 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.859419 2.463629 0.8052620 - - - hypothetical protein 1.919881 2.620554 0.9211133 - - - hypothetical protein FALSE FALSE -6 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 12.28409091 0.81624242 0.50137371 0.87673390 0.817065165 TRUE 0.5 0.817065165 TRUE 0.666998523 0.6711523 0.31078474 0.5524768 397945 7078 2085738 2085739 1 220 Same - - 0.0000000 -0.473469837 0 -4.734698e-01 NA 1.550111 2.019478 0.7997206 386 Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones] O glutathione peroxidase 2.402596 3.305284 0.9394277 - - - protein of unknown function DUF6, transmembrane TRUE FALSE -6 TRUE 0.6656184 0.5106087 0.4896427 0.9730156 0.9720916 U 0.9007526 0.6243711 35.75000000 0.08872732 0.38776567 0.13487680 0.058086061 FALSE 0.5 0.058086061 FALSE 0.028724640 0.6243711 0.23297640 0.5013562 397945 7078 2085739 2085740 1 43 Same - - 0.0000000 -0.473469837 0 -4.734698e-01 NA 2.402596 3.305284 0.9394277 - - - protein of unknown function DUF6, transmembrane 1.428440 1.894041 0.6775307 - - - major facilitator superfamily MFS_1 TRUE FALSE -7 TRUE 0.6656184 0.5106087 0.4896427 0.9730156 0.9720916 U 0.9007526 0.6243711 19.19318182 0.70885412 0.38776567 0.79585547 0.606616391 TRUE 0.5 0.606616391 TRUE 0.425128480 0.6243711 0.23297640 0.5013562 397945 7078 2085741 2085742 1 4 Same + + 0.0000000 0.427252462 0 4.272525e-01 NA 1.721534 2.314648 0.7715233 787 Alanine racemase [Cell envelope biogenesis, outer membrane] M alanine racemase 1.965435 2.637636 0.8837390 - - - hypothetical protein FALSE FALSE -7 TRUE 0.6656184 1.1773290 1.2891666 0.9730156 0.9720916 U 0.9007526 0.7268754 9.55681818 0.81217353 0.61761380 0.87379736 0.874750150 TRUE 0.5 0.874750150 TRUE 0.746943671 0.7268754 0.40568853 0.6168286 397945 7078 2085742 2085743 1 158 Same + + 0.0000000 0.000000000 0 0.000000e+00 NA 1.965435 2.637636 0.8837390 - - - hypothetical protein 1.341741 1.792735 0.6055154 747 ABC-type dipeptide transport system, periplasmic component [Amino acid transport and metabolism] E extracellular solute-binding protein, family 5 FALSE FALSE -6 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 32.83522727 0.16297507 0.50137371 0.23767071 0.163726038 FALSE 0.5 0.163726038 FALSE 0.080712186 0.6711523 0.31078474 0.5524768 397945 7078 2085744 2085745 1 28 Same - - 0.0000000 -0.401088734 0 -4.738481e-01 286.2 1.514505 2.070385 0.7212957 179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] Q fumarylacetoacetase 1.400841 1.926881 0.6808353 3181 Uncharacterized protein conserved in bacteria [Function unknown] S uncharacterized protein UPF0065 TRUE FALSE -6 TRUE 0.6656184 0.5098155 0.4965221 0.9730156 0.7675461 U 0.9007526 0.6073297 16.06250000 0.82021893 0.34203169 0.87959448 0.703407669 TRUE 0.5 0.703407669 TRUE 0.540603100 0.6073297 0.20504425 0.4833519 397945 7078 2085747 2085748 1 -3 Same - - 0.0000000 -1.692905381 0 -3.410755e+00 NA 1.522343 2.072191 0.7656496 625 Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] O glutathione S-transferase, N-terminal domain 1.713723 2.302708 0.7944243 1893 Ketopantoate reductase [Coenzyme metabolism] H 2-dehydropantoate 2-reductase - TRUE FALSE -7 TRUE 0.6656184 0.3455783 0.4256439 0.9730156 0.9720916 N 0.6071343 0.5687753 4.56250000 0.87879330 0.22844962 0.92069418 0.682214189 TRUE 0.5 0.682214189 TRUE 0.546749584 0.5687753 0.14264339 0.4437733 397945 7078 2085748 2085749 1 130 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.713723 2.302708 0.7944243 1893 Ketopantoate reductase [Coenzyme metabolism] H 2-dehydropantoate 2-reductase 1.560680 2.432356 0.9718445 - - - hypothetical protein TRUE FALSE -8 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 30.75000000 0.20308816 0.50137371 0.28980326 0.203978920 FALSE 0.5 0.203978920 FALSE 0.103071155 0.6711523 0.31078474 0.5524768 397945 7078 2085750 2085751 1 231 Same + + 0.0000000 -4.567818775 0 -2.847551e-01 NA 1.426509 1.945442 0.6878506 1066 Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones] O DNA repair protein RadA 1.521722 2.077007 0.8578187 - - - hypothetical protein FALSE FALSE -8 TRUE 0.6656184 0.5329424 0.3629368 0.9730156 0.9720916 U 0.9007526 0.6155149 36.12500000 0.08045505 0.36431436 0.12288209 0.047749148 FALSE 0.5 0.047749148 FALSE 0.023869381 0.6155149 0.21843332 0.4919596 397945 7078 2085751 2085752 1 45 Same + + 0.0000000 -0.185942763 0 2.613456e+00 NA 1.521722 2.077007 0.8578187 - - - hypothetical protein 1.351950 1.771084 0.6400471 115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] EH branched-chain amino acid aminotransferase FALSE FALSE -7 TRUE 0.6656184 1.3551803 0.5123266 0.9730156 0.9720916 U 0.9007526 0.6813966 19.69318182 0.68147058 0.52416999 0.77404643 0.702094897 TRUE 0.5 0.702094897 TRUE 0.510876632 0.6813966 0.32804847 0.5640165 397945 7078 2085752 2085753 1 41 Same + + 5.6856232 47.501366625 0 5.815224e+01 NA 1.351950 1.771084 0.6400471 115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] EH branched-chain amino acid aminotransferase 1.288890 1.662668 0.8887069 - - - hypothetical protein FALSE FALSE -6 TRUE 1.6540278 2.1086916 2.4249251 0.9730156 0.9720916 U 0.9007526 0.8926808 18.81250000 0.72986099 0.87765599 0.81224765 0.950936655 TRUE 0.5 0.950936655 TRUE 0.864947134 0.8926808 0.70330473 0.8342017 397945 7078 2085755 2085756 1 11 Same + + 4.8951771 -1.657807964 0 4.299394e+00 NA 1.845615 2.484479 0.8077000 3307 Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane] M O-antigen polymerase 1.612503 2.206318 0.7573271 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M glycosyl transferase, group 1 M FALSE FALSE -5 TRUE 1.5521304 1.4364910 0.4269049 0.9730156 0.9720916 Y 2.4748563 0.8854817 11.67613636 0.81505215 0.86838762 0.87587588 0.966752255 TRUE 0.5 0.966752255 TRUE 0.907438937 0.8854817 0.68988453 0.8238538 397945 7078 2085756 2085757 1 18 Same + + 0.0000000 0.672860285 0 5.571759e-01 NA 1.612503 2.206318 0.7573271 438 Glycosyltransferase [Cell envelope biogenesis, outer membrane] M glycosyl transferase, group 1 1.680268 2.278899 0.8029670 1216 Predicted glycosyltransferases [General function prediction only] R glycosyl transferase, family 2 FALSE FALSE -4 TRUE 0.6656184 1.2070002 1.3565297 0.9730156 0.9720916 U 0.9007526 0.7331810 13.63636364 0.82930879 0.62965460 0.88609916 0.892013187 TRUE 0.5 0.892013187 TRUE 0.776246218 0.7331810 0.41658385 0.6243619 397945 7078 2085757 2085758 1 -3 Same + + 0.0000000 0.672860285 0 6.728603e-01 NA 1.680268 2.278899 0.8029670 1216 Predicted glycosyltransferases [General function prediction only] R glycosyl transferase, family 2 1.732993 2.333153 0.7935765 - - - mannosyltransferase OCH1-related enzyme FALSE FALSE -3 TRUE 0.6656184 1.2167543 1.3565297 0.9730156 0.9720916 U 0.9007526 0.7337323 4.56250000 0.87879330 0.63069748 0.92069418 0.925274048 TRUE 0.5 0.925274048 TRUE 0.838642723 0.7337323 0.41753796 0.6250230 397945 7078 2085759 2085760 1 42 Same - - 11.2874630 -5.188607876 0 1.173200e+01 286.2 1.535553 2.126707 0.7819312 2070 Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only] R 2-nitropropane dioxygenase, NPD 1.529969 2.134617 0.7345819 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family TRUE FALSE -3 TRUE 2.1359374 1.6032160 0.3541942 0.9730156 0.7675461 U 0.9007526 0.8037808 18.97727273 0.72085102 0.75156919 0.80525233 0.886520874 TRUE 0.5 0.886520874 TRUE 0.752554044 0.8037808 0.54080747 0.7124628 397945 7078 2085762 2085763 1 244 Same - - 9.7672859 4.729113632 0 1.995831e+01 286.2 1.489549 2.027533 0.7058906 642 Signal transduction histidine kinase [Signal transduction mechanisms] T integral membrane sensor signal transduction histidine kinase 1.383896 1.839394 0.7156510 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family T TRUE FALSE -4 TRUE 2.0035539 1.7050834 1.7064445 0.9730156 0.7675461 Y 2.4748563 0.9376620 36.54545455 0.07172251 0.93234376 0.11009590 0.515678868 TRUE 0.5 0.515678868 TRUE 0.223355944 0.9376620 0.78823357 0.9009746 397945 7078 2085763 2085764 1 101 Same - - 0.0000000 -0.739327800 0 -4.965589e+00 NA 1.383896 1.839394 0.7156510 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family 1.571080 2.177233 0.7438832 - - - major facilitator superfamily MFS_1 TRUE FALSE -5 TRUE 0.6656184 0.3003631 0.4786293 0.9730156 0.9720916 U 0.9007526 0.6091003 27.72727273 0.28875114 0.34690249 0.39396085 0.177388785 FALSE 0.5 0.177388785 FALSE 0.096314074 0.6091003 0.20793626 0.4852077 397945 7078 2085765 2085766 1 63 Same + + 0.0000000 0.000000000 0 -6.551149e-01 NA 2.771121 3.757664 0.9868869 - - - hypothetical protein 1.743271 2.346474 0.8346221 2207 AraC-type DNA-binding domain-containing proteins [Transcription] K transcriptional regulator, AraC family FALSE FALSE -5 TRUE 0.6656184 0.4936075 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6485651 22.79545455 0.51761327 0.44856687 0.63210230 0.466057138 FALSE 0.5 0.466057138 FALSE 0.287218302 0.6485651 0.27300790 0.5274771 397945 7078 2085766 2085767 1 63 Same + + 2.4471663 -0.162248126 0 2.669664e+01 NA 1.743271 2.346474 0.8346221 2207 AraC-type DNA-binding domain-containing proteins [Transcription] K transcriptional regulator, AraC family 1.916601 2.683536 0.8934493 5006 Predicted permease, DMT superfamily [General function prediction only] R protein of unknown function DUF6, transmembrane FALSE FALSE -4 TRUE 1.1021867 1.7635318 0.5127956 0.9730156 0.9720916 U 0.9007526 0.7480892 22.79545455 0.51761327 0.65731522 0.63210230 0.673010945 TRUE 0.5 0.673010945 TRUE 0.459922843 0.7480892 0.44247201 0.6423846 397945 7078 2085767 2085768 1 140 Same + + 0.0000000 -3.688180233 0 -4.957762e+00 NA 1.916601 2.683536 0.8934493 5006 Predicted permease, DMT superfamily [General function prediction only] R protein of unknown function DUF6, transmembrane 1.440854 1.912286 0.7287278 501 Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] O peptidase M48, Ste24p FALSE FALSE -3 TRUE 0.6656184 0.3015601 0.3753045 0.9730156 0.9720916 U 0.9007526 0.6005986 31.53977273 0.19275420 0.32325238 0.27658832 0.102377978 FALSE 0.5 0.102377978 FALSE 0.054372836 0.6005986 0.19407104 0.4763281 397945 7078 2085769 2085770 1 160 Same - - 0.0000000 -3.832751594 0 -1.979344e+01 NA 1.475836 2.069410 0.7146907 471 Di- and tricarboxylate transporters [Inorganic ion transport and metabolism] P anion transporter 1.677569 2.227953 0.7470406 491 Zn-dependent hydrolases, including glyoxylases [General function prediction only] R beta-lactamase domain protein TRUE FALSE -3 TRUE 0.6656184 0.1771868 0.3724531 0.9730156 0.9720916 U 0.9007526 0.5917035 32.99431818 0.15858413 0.29778021 0.23182467 0.074008055 FALSE 0.5 0.074008055 FALSE 0.039630635 0.5917035 0.17962138 0.4671209 397945 7078 2085772 2085773 1 373 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 1.939020 2.684365 0.8930126 - - - putative GAF sensor protein 1.658139 2.268321 0.8293443 583 Transcriptional regulator [Transcription] K transcriptional regulator, LysR family TRUE FALSE -4 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 38.75000000 0.03489899 0.50137371 0.05473248 0.035084541 FALSE 0.5 0.035084541 FALSE 0.016044290 0.6711523 0.31078474 0.5524768 397945 7078 2085774 2085775 1 83 Same + + 11.7084518 4.005868193 0 3.247930e+01 286.2 1.481883 2.010756 0.7350039 2814 Arabinose efflux permease [Carbohydrate transport and metabolism] G major facilitator superfamily MFS_1 1.714851 2.361576 0.8378750 656 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] R 2,5-didehydrogluconate reductase FALSE FALSE -4 TRUE 2.1652917 1.8371604 1.6633620 0.9730156 0.7675461 U 0.9007526 0.8751133 25.68181818 0.37896756 0.85477103 0.49420811 0.782209548 TRUE 0.5 0.782209548 TRUE 0.554073177 0.8751133 0.67063856 0.8091086 397945 7078 2085777 2085778 1 80 Same + + 7.7805645 4.214041718 0 3.098247e+01 NA 1.767020 2.300266 0.7963855 461 Orotate phosphoribosyltransferase [Nucleotide transport and metabolism] F orotate phosphoribosyltransferase 1.511968 2.040699 0.7586499 - - - hypothetical protein FALSE FALSE -3 TRUE 1.8575858 1.8146673 1.6722411 0.9730156 0.9720916 U 0.9007526 0.8664234 25.33522727 0.39635045 0.84310768 0.51251466 0.779170664 TRUE 0.5 0.779170664 TRUE 0.554420792 0.8664234 0.65458253 0.7968918 397945 7078 2085779 2085780 1 2 Same - - 186.0787394 43.531231972 0 7.272307e+02 5.0 1.286988 1.716557 0.5827285 64 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) [Translation, ribosomal structure and biogenesis] J glutamyl-tRNA(Gln) amidotransferase, B subunit 1.250132 1.698245 0.5980818 154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] J glutamyl-tRNA(Gln) amidotransferase, A subunit J TRUE FALSE -3 TRUE 3.9144970 2.9760309 2.3085454 0.9730156 3.2395150 Y 2.4748563 0.9939623 8.81250000 0.82097574 0.99381832 0.88013787 0.998645459 TRUE 0.5 0.998645459 TRUE 0.975629064 0.9939623 0.89722079 0.9900576 397945 7078 2085780 2085781 1 23 Same - - 191.5765636 50.044233506 0 8.654711e+02 5.0 1.250132 1.698245 0.5980818 154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] J glutamyl-tRNA(Gln) amidotransferase, A subunit 1.807275 2.481906 0.9152478 721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit [Translation, ribosomal structure and biogenesis] J glutamyl-tRNA(Gln) amidotransferase, C subunit J TRUE FALSE -4 TRUE 3.9273001 3.0127867 2.5407664 0.9730156 3.2395150 Y 2.4748563 0.9945201 14.93181818 0.83677964 0.99439265 0.89140985 0.998901284 TRUE 0.5 0.998901284 TRUE 0.978397612 0.9945201 0.89831608 0.9909729 397945 7078 2085782 2085783 1 134 Same + + 96.5545990 52.667181995 0 5.108399e+02 286.2 1.342219 1.802209 0.6411523 1077 Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] D cell shape determining protein, MreB/Mrl family 1.548434 2.074988 0.7736459 1792 Cell shape-determining protein [Cell envelope biogenesis, outer membrane] M rod shape-determining protein MreC - FALSE FALSE -4 TRUE 3.5960324 2.8939215 2.7202848 0.9730156 0.7675461 N 0.6071343 0.9587850 31.05113636 0.19915066 0.95625424 0.28478532 0.844620637 TRUE 0.5 0.844620637 TRUE 0.546195204 0.9587850 0.82876794 0.9336492 397945 7078 2085783 2085784 1 -3 Same + + 29.6979402 51.524296883 0 2.877745e+02 NA 1.548434 2.074988 0.7736459 1792 Cell shape-determining protein [Cell envelope biogenesis, outer membrane] M rod shape-determining protein MreC 1.432493 1.946314 0.7976880 2891 Cell shape-determining protein [Cell envelope biogenesis, outer membrane] M putative rod shape-determining MreD transmembrane protein M FALSE FALSE -3 TRUE 2.9313584 2.6624060 2.6311119 0.9730156 0.9720916 Y 2.4748563 0.9787430 4.56250000 0.87879330 0.97789789 0.92069418 0.996892376 TRUE 0.5 0.996892376 TRUE 0.979361075 0.9787430 0.86745819 0.9653391 397945 7078 2085784 2085785 1 32 Same + + 14.7681556 50.360355247 0 7.892086e+01 NA 1.432493 1.946314 0.7976880 2891 Cell shape-determining protein [Cell envelope biogenesis, outer membrane] M putative rod shape-determining MreD transmembrane protein 1.362954 1.820259 0.6123429 768 Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane] M Peptidoglycan glycosyltransferase M FALSE FALSE -2 TRUE 2.3774931 2.2196068 2.5631524 0.9730156 0.9720916 Y 2.4748563 0.9680615 16.92613636 0.80140144 0.96642526 0.86597626 0.991464139 TRUE 0.5 0.991464139 TRUE 0.957059663 0.9680615 0.84670363 0.9482781 397945 7078 2085786 2085787 1 103 Same - - 2.3025851 -1.687549579 0 -4.677838e+00 NA 1.500170 2.033147 0.7590591 - - - protein of unknown function DUF6, transmembrane 1.276437 1.682328 0.6782707 1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] E ABC transporter-related protein TRUE FALSE -2 TRUE 1.0750659 0.3123306 0.4260036 0.9730156 0.9720916 U 0.9007526 0.6515094 27.93750000 0.28127072 0.45565810 0.38523109 0.246753630 FALSE 0.5 0.246753630 FALSE 0.130900613 0.6515094 0.27791010 0.5307019 397945 7078 2085787 2085788 1 -3 Same - - 20.6059107 3.333087028 0 2.651356e+01 286.2 1.276437 1.682328 0.6782707 1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] E ABC transporter-related protein 1.427938 1.960720 0.7445648 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E polar amino acid ABC transporter, inner membrane subunit E TRUE FALSE -3 TRUE 2.6370327 1.7615543 1.6232796 0.9730156 0.7675461 Y 2.4748563 0.9527094 4.56250000 0.87879330 0.94948550 0.92069418 0.992715622 TRUE 0.5 0.992715622 TRUE 0.970044962 0.9527094 0.81706572 0.9241614 397945 7078 2085788 2085789 1 39 Same - - 24.7930879 2.409160916 0 8.747627e+01 235.0 1.427938 1.960720 0.7445648 765 ABC-type amino acid transport system, permease component [Amino acid transport and metabolism] E polar amino acid ABC transporter, inner membrane subunit 1.277670 1.673819 0.6170993 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET extracellular solute-binding protein, family 3 E TRUE FALSE -4 TRUE 2.7661896 2.2562949 1.5534406 0.9730156 1.0289163 Y 2.4748563 0.9636911 18.47159091 0.74767975 0.96165778 0.82592816 0.986723348 TRUE 0.5 0.986723348 TRUE 0.938859469 0.9636911 0.83824332 0.9413644 397945 7078 2085789 2085790 1 191 Same - - 0.0000000 -10.485295000 0 -1.602209e+01 286.2 1.277670 1.673819 0.6170993 834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] ET extracellular solute-binding protein, family 3 1.461859 1.948172 0.7035491 1760 L-serine deaminase [Amino acid transport and metabolism] E L-serine dehydratase 1 E TRUE FALSE -5 TRUE 0.6656184 0.1882153 0.3258974 0.9730156 0.7675461 Y 2.4748563 0.7592740 34.69886364 0.11435382 0.67735430 0.17132636 0.213260870 FALSE 0.5 0.213260870 FALSE 0.099817167 0.7592740 0.46201397 0.6561051 397945 7078 2085792 2085793 1 303 Same - - 0.0000000 -10.021469118 0 -1.494760e+01 NA 1.641264 2.160016 0.7666058 730 Predicted permeases [General function prediction only] R protein of unknown function DUF81 1.518246 2.033019 0.6852312 2303 Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] E glucose-methanol-choline oxidoreductase TRUE FALSE -6 TRUE 0.6656184 0.1925871 0.3275198 0.9730156 0.9720916 U 0.9007526 0.5890027 37.86363636 0.04789849 0.28989419 0.07454906 0.020124535 FALSE 0.5 0.020124535 FALSE 0.010576542 0.5890027 0.17524576 0.4643421 397945 7078 2085794 2085795 1 3 Same + + 31.2720830 50.281670752 0 2.121608e+02 286.2 1.675422 2.247085 0.7855225 767 ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism] Q protein of unknown function DUF140 1.583532 2.193096 0.8191656 1127 ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] Q ABC transporter-related protein Q FALSE FALSE -6 TRUE 2.9721553 2.5475349 2.5531863 0.9730156 0.7675461 Y 2.4748563 0.9762169 9.19318182 0.81615233 0.97520733 0.87666899 0.994305793 TRUE 0.5 0.994305793 TRUE 0.965344916 0.9762169 0.86253988 0.9612831 397945 7078 2085795 2085796 1 0 Same + + 36.3134206 50.709159698 0 2.335954e+02 NA 1.583532 2.193096 0.8191656 1127 ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] Q ABC transporter-related protein 1.594185 2.188346 0.7873398 1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism] Q Mammalian cell entry related domain protein Q FALSE FALSE -5 TRUE 3.0686190 2.5805697 2.5863006 0.9730156 0.9720916 Y 2.4748563 0.9792935 7.98863636 0.83294748 0.97848233 0.88868971 0.995608970 TRUE 0.5 0.995608970 TRUE 0.970536368 0.9792935 0.86853073 0.9662247 397945 7078 2085796 2085797 1 80 Same + + 15.0117163 50.709159698 0 1.033137e+02 NA 1.594185 2.188346 0.7873398 1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism] Q Mammalian cell entry related domain protein 1.692492 2.340367 0.8899390 3218 ABC-type uncharacterized transport system, auxiliary component [General function prediction only] R putative lipoprotein FALSE FALSE -4 TRUE 2.3870912 2.3053427 2.5863006 0.9730156 0.9720916 U 0.9007526 0.9298276 25.33522727 0.39635045 0.92319930 0.51251466 0.887548028 TRUE 0.5 0.887548028 TRUE 0.691337920 0.9298276 0.77330651 0.8890749 397945 7078 2085799 2085800 1 232 Same + + 0.0000000 -3.367561875 0 -7.160912e+00 NA 1.452651 1.929982 0.7712731 175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [Amino acid transport and metabolism / Coenzyme metabolism] EH phosphoadenosine phosphosulfate reductase 1.456225 1.770248 0.8442866 3237 Uncharacterized protein conserved in bacteria [Function unknown] S CsbD family protein FALSE FALSE -3 TRUE 0.6656184 0.2593969 0.3792179 0.9730156 0.9720916 U 0.9007526 0.5979981 36.13636364 0.08021159 0.31588396 0.12252735 0.038708136 FALSE 0.5 0.038708136 FALSE 0.020025470 0.5979981 0.18984064 0.4736276 397945 7078 2085800 2085801 1 72 Same + + 0.0000000 4.352417207 0 3.949960e+00 NA 1.456225 1.770248 0.8442866 3237 Uncharacterized protein conserved in bacteria [Function unknown] S CsbD family protein 1.268236 1.628769 0.5818323 - - - hypothetical protein FALSE FALSE -2 TRUE 0.6656184 1.4161875 1.6811611 0.9730156 0.9720916 U 0.9007526 0.7656929 24.13068182 0.45392123 0.68859011 0.57099811 0.647643426 TRUE 0.5 0.647643426 TRUE 0.427553570 0.7656929 0.47327549 0.6640578 397945 7078 2085801 2085802 1 207 Same + + 0.0000000 -0.383551649 0 -3.835516e-01 NA 1.268236 1.628769 0.5818323 - - - hypothetical protein 1.709194 2.408044 0.8884005 2703 Hemerythrin [Inorganic ion transport and metabolism] P hemerythrin-like metal-binding protein FALSE FALSE -1 TRUE 0.6656184 0.5259791 0.5009708 0.9730156 0.9720916 U 0.9007526 0.6263348 35.42045455 0.09638956 0.39287568 0.14588635 0.064570942 FALSE 0.5 0.064570942 FALSE 0.031935587 0.6263348 0.23620900 0.5034515 397945 7078 2085803 2085804 1 -3 Same - - 0.0000000 0.000000000 0 0.000000e+00 NA 2.088516 3.003642 1.0302532 - - - hypothetical protein 1.777036 2.447818 0.8117375 4452 Inner membrane protein involved in colicin E2 resistance [Defense mechanisms] V Inner membrane CreD family protein TRUE FALSE -1 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.9720916 U 0.9007526 0.6711523 4.56250000 0.87879330 0.50137371 0.92069418 0.879377366 TRUE 0.5 0.879377366 TRUE 0.765773748 0.6711523 0.31078474 0.5524768 397945 7078 2085804 2085805 1 148 Same - - 13.4218605 10.511268706 0 1.473937e+02 NA 1.777036 2.447818 0.8117375 4452 Inner membrane protein involved in colicin E2 resistance [Defense mechanisms] V Inner membrane CreD family protein 1.703029 2.277290 0.7658948 642 Signal transduction histidine kinase [Signal transduction mechanisms] T integral membrane sensor signal transduction histidine kinase - TRUE FALSE -2 TRUE 2.3203836 2.4243843 1.9077171 0.9730156 0.9720916 N 0.6071343 0.8992707 32.09090909 0.18303353 0.88601004 0.26402263 0.635222830 TRUE 0.5 0.635222830 TRUE 0.360536100 0.8992707 0.71563072 0.8437540 397945 7078 2085805 2085806 1 57 Same - - 13.8456748 11.979529840 0 1.629335e+02 286.2 1.703029 2.277290 0.7658948 642 Signal transduction histidine kinase [Signal transduction mechanisms] T integral membrane sensor signal transduction histidine kinase 1.482603 2.033661 0.7416849 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family T TRUE FALSE -3 TRUE 2.3322137 2.4616100 1.9581737 0.9730156 0.7675461 Y 2.4748563 0.9598886 21.99431818 0.55937671 0.95747460 0.67026789 0.966197403 TRUE 0.5 0.966197403 TRUE 0.861837228 0.9598886 0.83089746 0.9353806 397945 7078 2085806 2085807 1 3 Same - - 0.0000000 -5.014587913 0 -8.609861e+00 NA 1.482603 2.033661 0.7416849 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription] TK two component transcriptional regulator, winged helix family 1.506875 2.012040 0.7714165 2095 Multiple antibiotic transporter [Intracellular trafficking and secretion] U multiple antibiotic resistance (MarC)-related protein - TRUE FALSE -4 TRUE 0.6656184 0.2379599 0.3563645 0.9730156 0.9720916 N 0.6071343 0.5551893 9.19318182 0.81615233 0.18466590 0.87666899 0.501360940 TRUE 0.5 0.501360940 TRUE 0.379109917 0.5551893 0.12091207 0.4301944 397945 7078 2085807 2085808 1 19 Same - - 0.0000000 -7.464694679 0 -1.361607e+01 NA 1.506875 2.012040 0.7714165 2095 Multiple antibiotic transporter [Intracellular trafficking and secretion] U multiple antibiotic resistance (MarC)-related protein 1.745586 2.348117 0.8213965 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] QR short-chain dehydrogenase/reductase SDR - TRUE FALSE -5 TRUE 0.6656184 0.1987239 0.3366506 0.9730156 0.9720916 N 0.6071343 0.5506913 13.84659091 0.83218175 0.16969406 0.88814518 0.503343015 TRUE 0.5 0.503343015 TRUE 0.388918403 0.5506913 0.11374655 0.4257398 397945 7078 2085810 2085811 1 33 Same - - 5.2882670 -4.075347112 0 -1.620608e+00 235.0 1.597082 2.199609 0.7233590 - - - drug resistance transporter, EmrB/QacA subfamily 1.680463 2.308061 0.7839655 1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU transcriptional regulator, Fis family TRUE FALSE -6 TRUE 1.5819002 0.4209601 0.3683920 0.9730156 1.0289163 U 0.9007526 0.7112594 17.25568182 0.79379195 0.58687521 0.86041005 0.845403857 TRUE 0.5 0.845403857 TRUE 0.701295976 0.7112594 0.37884372 0.5983970 397945 7078 2085811 2085812 1 38 Same - - 2.0243818 2.461189711 0 4.365612e+00 286.2 1.680463 2.308061 0.7839655 1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] MU transcriptional regulator, Fis family 1.609874 2.191419 0.8423283 1846 Transcriptional regulators [Transcription] K transcriptional regulator, MarR family - TRUE FALSE -7 TRUE 1.0356081 1.4396670 1.5582348 0.9730156 0.7675461 N 0.6071343 0.7485083 18.28977273 0.75653400 0.65807677 0.83265116 0.856743956 TRUE 0.5 0.856743956 TRUE 0.712097815 0.7485083 0.44320229 0.6428955 397945 7078 2085812 2085813 1 133 Same - - 0.0000000 -1.414869112 0 -3.517006e+00 286.2 1.609874 2.191419 0.8423283 1846 Transcriptional regulators [Transcription] K transcriptional regulator, MarR family 1.994023 2.733472 0.9083646 518 GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] F glutamine amidotransferase class-I - TRUE FALSE -8 TRUE 0.6656184 0.3416730 0.4333047 0.9730156 0.7675461 N 0.6071343 0.5508700 30.98295455 0.20001189 0.17029374 0.28588468 0.048810543 FALSE 0.5 0.048810543 FALSE 0.031176096 0.5508700 0.11403105 0.4259164 397945 7078 2085813 2085814 1 15 Same - - 0.0000000 0.000000000 0 0.000000e+00 286.2 1.994023 2.733472 0.9083646 518 GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] F glutamine amidotransferase class-I 1.546940 2.107005 0.7334796 598 Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] P Mg2+ transporter protein, CorA family protein - TRUE FALSE -9 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 N 0.6071343 0.6172446 12.86363636 0.81888771 0.36894742 0.87863786 0.725536811 TRUE 0.5 0.725536811 TRUE 0.562310271 0.6172446 0.22126905 0.4937880 397945 7078 2085814 2085815 1 64 Same - - 0.0000000 7.511767362 0 7.324026e+00 286.2 1.546940 2.107005 0.7334796 598 Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] P Mg2+ transporter protein, CorA family protein 1.504983 2.005961 0.7297486 113 Delta-aminolevulinic acid dehydratase [Coenzyme metabolism] H Porphobilinogen synthase - TRUE FALSE -10 TRUE 0.6656184 1.5228201 1.8187991 0.9730156 0.7675461 N 0.6071343 0.7363902 22.93181818 0.51088888 0.63570342 0.62582017 0.645730942 TRUE 0.5 0.645730942 TRUE 0.432802256 0.7363902 0.42214125 0.6282161 397945 7078 2085816 2085817 1 18 Same + + 0.0000000 -1.683198104 0 -3.164312e+00 NA 1.375600 1.808410 0.7710215 1981 Predicted membrane protein [Function unknown] S conserved hypothetical protein 701 1.652438 2.292167 0.8090530 - - - VanZ family protein FALSE FALSE -10 TRUE 0.6656184 0.3534001 0.4261836 0.9730156 0.9720916 U 0.9007526 0.6084100 13.63636364 0.82930879 0.34500700 0.88609916 0.719034335 TRUE 0.5 0.719034335 TRUE 0.558842400 0.6084100 0.20680855 0.4844838 397945 7078 2085817 2085818 1 10 Same + + 1.1245878 27.824303609 0 3.099003e+01 NA 1.652438 2.292167 0.8090530 - - - VanZ family protein 1.440933 1.878953 0.7966243 3411 Ferredoxin [Energy production and conversion] C ferredoxin-like protein FALSE FALSE -9 TRUE 0.7873325 1.8156839 2.1145781 0.9730156 0.9720916 U 0.9007526 0.8188931 11.38636364 0.81320557 0.77493426 0.87454311 0.937459601 TRUE 0.5 0.937459601 TRUE 0.851250150 0.8188931 0.56794330 0.7322655 397945 7078 2085818 2085819 1 90 Same + + 4.2406615 40.324575178 0 4.956688e+01 NA 1.440933 1.878953 0.7966243 3411 Ferredoxin [Energy production and conversion] C ferredoxin-like protein 2.008588 2.712895 0.8873922 2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] R putative transmembrane protein FALSE FALSE -8 TRUE 1.4596050 2.0274340 2.2425401 0.9730156 0.9720916 U 0.9007526 0.8741314 26.53409091 0.33728832 0.85346480 0.44901834 0.747747864 TRUE 0.5 0.747747864 TRUE 0.506863449 0.8741314 0.66882100 0.8077218 397945 7078 2085819 2085820 1 81 Same + + 0.0000000 5.038796323 0 3.129391e+01 NA 2.008588 2.712895 0.8873922 2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] R putative transmembrane protein 1.535824 2.076468 0.7355200 1686 D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane] M Serine-type D-Ala-D-Ala carboxypeptidase FALSE FALSE -7 TRUE 0.6656184 1.8197559 1.7242117 0.9730156 0.9720916 U 0.9007526 0.7884799 25.45454545 0.39038328 0.72700010 0.50626534 0.630358188 TRUE 0.5 0.630358188 TRUE 0.403341214 0.7884799 0.51353142 0.6927630 397945 7078 2085820 2085821 1 156 Same + + 2.8903718 -9.448694837 0 -3.529872e+01 286.2 1.535824 2.076468 0.7355200 1686 D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane] M Serine-type D-Ala-D-Ala carboxypeptidase 1.732569 2.281111 0.8315210 48 Ribosomal protein S12 [Translation, ribosomal structure and biogenesis] J ribosomal protein S12 - FALSE FALSE -6 TRUE 1.2616939 0.1573509 0.3293800 0.9730156 0.7675461 N 0.6071343 0.5990577 32.68181818 0.16729230 0.31889403 0.24339126 0.085975173 FALSE 0.5 0.085975173 FALSE 0.045441584 0.5990577 0.19156376 0.4747271 397945 7078 2085821 2085822 1 165 Same + + 297.2370779 37.554973028 0 1.452782e+03 8.0 1.732569 2.281111 0.8315210 48 Ribosomal protein S12 [Translation, ribosomal structure and biogenesis] J ribosomal protein S12 1.710099 2.241299 0.8225653 49 Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] J ribosomal protein S7 J FALSE FALSE -5 TRUE 4.0533774 3.1131424 2.2068402 0.9730156 3.0390651 Y 2.4748563 0.9939525 33.32386364 0.14971474 0.99380831 0.21992971 0.965825252 TRUE 0.5 0.965825252 TRUE 0.605795302 0.9939525 0.89720171 0.9900416 397945 7078 2085822 2085823 1 83 Same + + 258.8459655 38.297032897 0 1.340748e+03 286.2 1.710099 2.241299 0.8225653 49 Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] J ribosomal protein S7 1.321401 1.743110 0.5595732 480 Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] J translation elongation factor G J FALSE FALSE -4 TRUE 4.0111000 3.0952053 2.2157165 0.9730156 0.7675461 Y 2.4748563 0.9860133 25.68181818 0.37896756 0.98556442 0.49420811 0.976559854 TRUE 0.5 0.976559854 TRUE 0.819681921 0.9860133 0.88164769 0.9770864 397945 7078 2085823 2085824 1 254 Same + + 0.0000000 0.000000000 0 0.000000e+00 5.0 1.321401 1.743110 0.5595732 480 Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] J translation elongation factor G 1.335248 1.731976 0.5691307 50 GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] J translation elongation factor Tu J FALSE FALSE -3 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 3.2395150 Y 2.4748563 0.9168924 36.82954545 0.06613788 0.90775910 0.10185118 0.410714646 FALSE 0.5 0.410714646 FALSE 0.174302185 0.9168924 0.74878615 0.8696804 397945 7078 2085824 2085825 1 24 Same + + 0.0000000 0.000000000 0 0.000000e+00 286.2 1.335248 1.731976 0.5691307 50 GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] J translation elongation factor Tu 1.506279 1.943727 0.8260743 51 Ribosomal protein S10 [Translation, ribosomal structure and biogenesis] J ribosomal protein S10 J FALSE FALSE -2 TRUE 0.6656184 0.8417995 0.8046672 0.9730156 0.7675461 Y 2.4748563 0.8181835 15.24431818 0.83350863 0.77385648 0.88908855 0.944847277 TRUE 0.5 0.944847277 TRUE 0.867491258 0.8181835 0.56666476 0.7313279 397945 7078 2085825 2085826 1 260 Same + + 248.5481870 42.526522358 0 1.203696e+03 56.0 1.506279 1.943727 0.8260743 51 Ribosomal protein S10 [Translation, ribosomal structure and biogenesis] J ribosomal protein S10 1.947786 2.600349 0.8408948 87 Ribosomal protein L3 [Translation, ribosomal structure and biogenesis] J ribosomal protein L3 J FALSE FALSE -1 TRUE 3.9949065 3.0838200 2.2867413 0.9730156 2.1885270 Y 2.4748563 0.9917123 36.97159091 0.06343970 0.99149552 0.09784869 0.887603971 TRUE 0.5 0.887603971 TRUE 0.360685874 0.9917123 0.89280663 0.9863725 397945 7078 2085826 2085827 1 0 Same + + 285.6066212 51.948246113 0 1.362335e+03 42.0 1.947786 2.600349 0.8408948 87 Ribosomal protein L3 [Translation, ribosomal structure and biogenesis] J ribosomal protein L3 1.609389 2.103929 0.7416312 88 Ribosomal protein L4 [Translation, ribosomal structure and biogenesis] J ribosomal protein L4/L1e J FALSE FALSE 0 TRUE 4.0338335 3.0968337 2.6559415 0.9730156 2.4129241 Y 2.4748563 0.9934186 7.98863636 0.83294748 0.99325801 0.88868971 0.998640526 TRUE 0.5 0.998640526 TRUE 0.977287432 0.9934186 0.89615370 0.9891661 397945 7078 2085827 2085828 1 -3 Same + + 294.3680759 51.948246113 0 1.374834e+03 286.2 1.609389 2.103929 0.7416312 88 Ribosomal protein L4 [Translation, ribosomal structure and biogenesis] J ribosomal protein L4/L1e 1.9