MicrobesOnline Operon Predictions for Prochlorococcus marinus str. MIT 9313

For each pair of adjacent genes on the same strand, we report whether they are predicted to be in the same operon, and the two most important features. Small plasmids and, in draft genomes, small scaffolds, are excluded.

Also see:

Column	Description
Gene1	VIMSS id of 1st gene in pair
SysName1	Systematic name of 1st gene in pair
Name1	Ordinary name of 1st gene in pair
Gene2	VIMSS id of 2nd gene in pair
SysName2	Systematic name of 2nd gene in pair
Name2	Ordinary name of 2nd gene in pair
bOp	Whether the pair is predicted to lie in the same operon or not
pOp	Estimated probability that the pair is in the same operon. Values near 1 or 0 are confident predictions of being in the same operon or not, while values near 0.5 are low-confidence predictions.
Sep	Distance between the two genes, in base pairs
MOGScore	Conservation, ranging from 0 (not conserved) to 1 (100% conserved)
GOScore	Smallest shared GO category, as a fraction of the genome, or missing if one of the genes is not characterized
COGSim	Whether the genes share a COG category or not
ExprSim	Correlation of expression patterns (not available for most genomes)

Gene1	Gene2	SysName1	SysName2	Name1	Name2	bOp	pOp	Sep	MOGScore	GOScore	COGSim	ExprSim
567091	567092	PMT0001	PMT0002	dnaN		FALSE	0.587	40.000	0.022	NA		NA
567092	567093	PMT0002	PMT0003		purL	FALSE	0.630	58.000	0.039	NA		NA
567093	567094	PMT0003	PMT0004	purL	purF	TRUE	0.893	60.000	0.019	1.000	Y	NA
567095	567096	PMT0005	PMT0006			TRUE	0.723	78.000	0.143	1.000	N	NA
567096	567097	PMT0006	PMT0007			TRUE	0.776	10.000	0.042	1.000	N	NA
567098	567099	PMT0008	PMT0009			FALSE	0.526	73.000	0.043	NA		NA
567099	567100	PMT0009	PMT0010		nusB	TRUE	0.811	-3.000	0.016	NA		NA
567100	567101	PMT0010	PMT0011	nusB	ftsY	TRUE	0.854	0.000	0.013	1.000		NA
567101	567102	PMT0011	PMT0012	ftsY	rsbU	FALSE	0.700	63.000	0.013	1.000	N	NA
567102	567103	PMT0012	PMT0013	rsbU	argH	TRUE	0.739	30.000	0.021	1.000	N	NA
567103	567104	PMT0013	PMT0014	argH		FALSE	0.137	124.000	0.019	1.000		NA
567106	567107	PMT0016	PMT0017			FALSE	0.098	-73.000	0.024	1.000		NA
567108	567109	PMT0018	PMT0019	pilC	pilT1	TRUE	0.925	17.000	0.218	1.000	Y	NA
567109	567110	PMT0019	PMT0020	pilT1	gspE1	TRUE	0.911	11.000	0.028	0.004	Y	NA
567111	567112	PMT0021	PMT0022	grpE	dnaJ	TRUE	0.948	45.000	0.168	0.015	Y	NA
567112	567113	PMT0022	PMT0023	dnaJ		TRUE	0.910	-3.000	0.067	1.000		NA
567113	567114	PMT0023	PMT0024			FALSE	0.611	-13.000	0.058	1.000		NA
567115	567116	PMT0025	PMT0026		murB	FALSE	0.579	25.000	0.030	NA		NA
567116	567117	PMT0026	PMT0027	murB	murC	TRUE	0.850	-24.000	0.136	0.006	Y	NA
567119	567120	PMT0029	PMT0030	thiL		FALSE	0.658	11.000	0.000	1.000	N	NA
567121	567122	PMT0031	PMT0032	efp	accB	TRUE	0.959	0.000	0.120	1.000	N	NA
567128	567129	PMT0038	PMT0039			FALSE	0.683	63.000	0.091	NA		NA
567130	567131	PMT0040	PMT0041			TRUE	0.885	38.000	0.471	NA		NA
567131	567132	PMT0041	PMT0042			FALSE	0.392	135.000	0.588	NA		NA
567133	567134	RNA_44	PMT0043	tRNA-Gly3	DHSS	FALSE	0.404	49.000	0.000	NA		NA
567135	567136	PMT0044	PMT0045	cbiD	guaA	TRUE	0.774	41.000	0.023	1.000	N	NA
567136	567137	PMT0045	PMT0046	guaA		FALSE	0.006	470.000	0.004	NA		NA
567137	567138	PMT0046	PMT0047			TRUE	0.873	16.000	0.650	NA		NA
567138	567139	PMT0047	PMT0048			FALSE	0.676	6.000	0.047	NA		NA
567140	567141	PMT0049	PMT0050	sqdX	sqdB	FALSE	0.565	-54.000	0.194	1.000	Y	NA
567141	567142	PMT0050	PMT0051	sqdB		FALSE	0.689	60.000	0.079	NA		NA
567142	567143	PMT0051	PMT0052		thiG	FALSE	0.410	74.000	0.018	NA		NA
567145	1295740	PMT0054				FALSE	0.230	77.000	0.000	NA		NA
1295598	1203818					FALSE	0.204	80.000	0.000	NA		NA
567146	567147	PMT0055	PMT0056	rpl20	rpl35	TRUE	0.962	72.000	0.928	0.029	Y	NA
1295854	567148		PMT0057			FALSE	0.702	-3.000	0.000	NA		NA
567148	567149	PMT0057	PMT0058			TRUE	0.835	25.000	0.164	1.000	N	NA
567150	567151	PMT0059	PMT0060	dnaX		FALSE	0.411	24.000	0.005	NA		NA
567151	567152	PMT0060	PMT0061		clpX	FALSE	0.529	5.000	0.003	NA		NA
567152	567153	PMT0061	PMT0062	clpX	clpP2	TRUE	0.789	89.000	0.037	0.006	Y	NA
567153	567154	PMT0062	PMT0063	clpP2	tig	TRUE	0.915	47.000	0.025	1.000	Y	NA
567155	1295748	PMT0064		asd		FALSE	0.146	-34.000	0.008	NA		NA
1295748	567156		PMT0065		dapA	TRUE	0.882	-3.000	0.052	NA		NA
567158	567159	PMT0067	PMT0068		mesJ	FALSE	0.112	-39.000	0.007	NA		NA
567160	567161	PMT0069	PMT0070	ycf23		TRUE	0.728	45.000	0.086	NA		NA
567161	567162	PMT0070	PMT0071		uvrB	FALSE	0.127	105.000	0.003	NA		NA
567162	1362717	PMT0071		uvrB	pseudo	FALSE	0.091	107.000	0.000	NA		NA
1362717	567163		PMT0072	pseudo		FALSE	0.288	71.000	0.000	NA		NA
567164	567165	PMT0073	PMT0074	lysC	holA	TRUE	0.759	49.000	0.015	1.000	N	NA
567167	567168	PMT0076	PMT0077			TRUE	0.991	2.000	0.917	0.007	Y	NA
567168	567169	PMT0077	PMT0078			TRUE	0.949	-3.000	0.167	0.004		NA
567169	567170	PMT0078	PMT0079		mutS	FALSE	0.491	54.000	0.000	1.000		NA
567171	567172	PMT0080	PMT0081	psbZ	ribH	FALSE	0.692	53.000	0.037	1.000		NA
567172	567173	PMT0081	RNA_1	ribH	tRNA-Gly1	FALSE	0.212	79.000	0.000	NA		NA
567175	567176	PMT0083	PMT0084	secA		FALSE	0.011	303.000	0.000	1.000		NA
567176	567177	PMT0084	PMT0085			FALSE	0.380	57.000	0.000	NA		NA
567177	567178	PMT0085	PMT0086			FALSE	0.003	854.000	0.000	NA		NA
567180	567181	PMT0088	PMT0089			FALSE	0.518	-7.000	0.000	1.000		NA
567181	567182	PMT0089	PMT0090			FALSE	0.007	319.000	0.000	NA		NA
567182	567183	PMT0090	PMT0091			FALSE	0.054	128.000	0.000	NA		NA
567183	567184	PMT0091	PMT0092			FALSE	0.578	3.000	0.000	NA		NA
567184	567185	PMT0092	PMT0093			TRUE	0.729	0.000	0.000	NA		NA
567185	567186	PMT0093	PMT0094			TRUE	0.895	-3.000	0.000	1.000	N	NA
567186	567187	PMT0094	PMT0095			FALSE	0.443	29.000	0.000	1.000		NA
567187	567188	PMT0095	PMT0096			TRUE	0.976	-3.000	0.678	1.000		NA
567188	567189	PMT0096	PMT0097			TRUE	0.946	-3.000	0.072	1.000	N	NA
567189	567190	PMT0097	PMT0098			TRUE	0.803	7.000	0.067	NA	N	NA
567190	567191	PMT0098	PMT0099		HisH	TRUE	0.803	3.000	0.000	NA	N	NA
567191	567192	PMT0099	PMT0100	HisH	hisF	TRUE	0.926	-6.000	0.000	0.007	Y	NA
567192	567193	PMT0100	PMT0101	hisF		TRUE	0.895	-3.000	0.000	1.000	N	NA
567193	567194	PMT0101	PMT0102		spsF	FALSE	0.153	132.000	0.000	1.000	N	NA
567194	567195	PMT0102	PMT0103	spsF		FALSE	0.679	75.000	0.039	1.000	N	NA
567195	567196	PMT0103	PMT0104			TRUE	0.875	4.000	0.056	1.000	N	NA
567196	567197	PMT0104	PMT0105			FALSE	0.024	-94.000	0.000	NA		NA
567197	567198	PMT0105	PMT0106		neuB	TRUE	0.729	0.000	0.000	NA		NA
567199	567200	PMT0107	PMT0108			TRUE	0.779	-3.000	0.000	1.000		NA
567200	567201	PMT0108	PMT0109		tagG	TRUE	0.978	0.000	0.028	1.000	Y	NA
567201	567202	PMT0109	PMT0110	tagG		FALSE	0.459	32.000	0.000	1.000		NA
567204	567205	PMT0112	PMT0113	rmlA	rfbC	TRUE	0.952	-10.000	0.450	1.000	Y	NA
567205	567206	PMT0113	PMT0114	rfbC	rfbD	TRUE	0.984	-3.000	0.197	1.000	Y	NA
1203822	567207		PMT0115		rfbB	FALSE	0.004	532.000	0.000	NA		NA
567207	567208	PMT0115	PMT0116	rfbB		FALSE	0.003	1118.000	0.000	NA		NA
567211	567212	PMT0119	PMT0120	infC	miaA	TRUE	0.886	63.000	0.020	1.000	Y	NA
567213	567214	PMT0121	PMT0122	gyrB		TRUE	0.847	0.000	0.020	NA		NA
567214	567215	PMT0122	PMT0123			TRUE	0.932	-7.000	0.900	NA		NA
567215	567216	PMT0123	PMT0124			TRUE	0.976	-7.000	0.722	0.081	Y	NA
567218	567219	PMT0126	PMT0127	mgtE		FALSE	0.360	95.000	0.000	1.000	N	NA
567220	567221	PMT0128	PMT0129			TRUE	0.950	-3.000	0.136	NA	N	NA
567221	567222	PMT0129	PMT0130			TRUE	0.943	8.000	1.000	NA	N	NA
567223	567224	PMT0131	PMT0132		sdhA	TRUE	0.916	0.000	0.023	0.002		NA
567224	567225	PMT0132	PMT0133	sdhA	sdhB	TRUE	0.976	-3.000	0.019	0.002	Y	NA
567227	567228	PMT0135	PMT0136	mutY		FALSE	0.701	25.000	0.014	1.000	N	NA
567230	567231	PMT0138	PMT0139	ahcY		FALSE	0.481	51.000	0.003	NA		NA
567231	567232	PMT0139	PMT0140		dedA	FALSE	0.697	40.000	0.067	NA		NA
567234	567235	PMT0142	PMT0143	mreB	mreC	TRUE	0.836	5.000	0.043	1.000	N	NA
567235	567236	PMT0143	PMT0144	mreC		TRUE	0.866	0.000	0.024	NA		NA
567236	567237	PMT0144	PMT0145			TRUE	0.736	14.000	0.169	NA		NA
567237	567238	PMT0145	PMT0146			FALSE	0.265	147.000	0.185	1.000	N	NA
567238	567239	PMT0146	PMT0147		lysS	TRUE	0.795	47.000	0.027	1.000	N	NA
567239	567240	PMT0147	PMT0148	lysS		FALSE	0.589	60.000	0.026	NA		NA
567241	567242	PMT0149	PMT0150			TRUE	0.955	-3.000	0.333	NA		NA
567242	567243	PMT0150	PMT0151			TRUE	0.883	26.000	0.611	NA		NA
567243	567244	PMT0151	PMT0152			TRUE	0.910	-3.000	0.097	NA		NA
567245	567246	PMT0153	PMT0154			FALSE	0.145	93.000	0.000	NA		NA
567248	567249	PMT0156	PMT0157	ruvB		TRUE	0.921	-3.000	0.019	1.000	N	NA
567249	567250	PMT0157	PMT0158			TRUE	0.962	-3.000	0.365	1.000		NA
567250	567251	PMT0158	PMT0159			TRUE	0.958	-3.000	0.365	NA		NA
567251	567252	PMT0159	PMT0160		thiC	FALSE	0.013	277.000	0.006	NA		NA
567252	1203756	PMT0160		thiC		FALSE	0.003	2234.000	0.000	NA		NA
1203756	1203828					FALSE	0.008	301.000	0.000	NA		NA
567253	1203829	PMT0161				FALSE	0.003	1406.000	0.000	NA		NA
1203829	567254		PMT0162			FALSE	0.380	8.000	0.000	NA		NA
567254	1362718	PMT0162			pseudo	FALSE	0.003	1290.000	0.000	NA		NA
1362718	567255		PMT0163	pseudo	aroK	FALSE	0.003	738.000	0.000	NA		NA
567256	567257	PMT0164	PMT0165		ribG	TRUE	0.953	9.000	0.370	1.000	Y	NA
567257	567258	PMT0165	PMT0166	ribG		FALSE	0.409	21.000	0.008	NA		NA
567258	1203831	PMT0166				FALSE	0.668	1.000	0.000	NA		NA
567260	567261	PMT0168	PMT0169			FALSE	0.017	200.000	0.000	NA		NA
567261	567262	PMT0169	PMT0170			FALSE	0.013	219.000	0.000	NA		NA
567262	567263	PMT0170	PMT0171			FALSE	0.074	115.000	0.000	NA		NA
567263	567264	PMT0171	PMT0172			FALSE	0.006	367.000	0.000	NA		NA
567266	567267	PMT0174	PMT0175			TRUE	0.833	-3.000	0.020	NA		NA
567269	567270	PMT0177	PMT0178	nadB	psbU	FALSE	0.579	71.000	0.036	1.000		NA
567270	567271	PMT0178	PMT0179	psbU		FALSE	0.400	112.000	0.268	NA		NA
567272	567273	PMT0180	PMT0181	bacA		TRUE	0.817	52.000	0.055	1.000	N	NA
567273	567274	PMT0181	PMT0182			FALSE	0.650	25.000	0.000	1.000	N	NA
567274	567275	PMT0182	PMT0183			TRUE	0.907	0.000	0.000	1.000	N	NA
567275	1203834	PMT0183				FALSE	0.156	-27.000	0.000	NA		NA
567276	567277	RNA_45	RNA_53	16S_rRNA		FALSE	0.008	-1464.000	0.000	NA		NA
567277	807272	RNA_53			rrs	FALSE	0.008	-1464.000	0.000	NA		NA
807272	567278		RNA_2	rrs	tRNA-Ile1	FALSE	0.020	183.000	0.000	NA		NA
567278	1203838	RNA_2		tRNA-Ile1		FALSE	0.115	-32.000	0.000	NA		NA
1203838	567279		RNA_3		tRNA-Ala1	FALSE	0.014	-114.000	0.000	NA		NA
567280	807270	RNA_54			rrl	FALSE	0.008	-2874.000	0.000	NA		NA
807270	567281		RNA_55	rrl		FALSE	0.087	108.000	0.000	NA		NA
567281	807274	RNA_55			rrf	FALSE	0.016	-112.000	0.000	NA		NA
1295616	567282		PMT0184		masA	FALSE	0.240	-16.000	0.000	NA		NA
567282	567283	PMT0184	PMT0185	masA		TRUE	0.960	-3.000	0.174	1.000	N	NA
567283	567284	PMT0185	PMT0186		FPG	FALSE	0.685	13.000	0.010	1.000	N	NA
567284	567285	PMT0186	PMT0187	FPG	psaE	TRUE	0.707	6.000	0.040	1.000		NA
567286	567287	PMT0188	PMT0189		recQ	TRUE	0.756	72.000	0.273	NA		NA
567288	567289	PMT0190	PMT0191			FALSE	0.617	101.000	0.429	1.000		NA
567289	1203841	PMT0191				FALSE	0.439	26.000	0.000	1.000		NA
567291	1362719	PMT0193		alsT	pseudo	FALSE	0.010	258.000	0.000	NA		NA
1362719	1203843			pseudo		FALSE	0.380	8.000	0.000	NA		NA
1203757	1295622					FALSE	0.008	284.000	0.000	NA		NA
1295622	567292		PMT0194			FALSE	0.404	49.000	0.000	NA		NA
567293	567294	RNA_43	RNA_42	tRNA-Thr3	tRNA-Tyr1	FALSE	0.380	8.000	0.000	NA		NA
567295	567296	PMT0195	PMT0196	aroD	miaE	TRUE	0.935	-3.000	0.039	1.000	N	NA
567298	567299	PMT0198	PMT0199	cobI/cbiL		TRUE	0.729	0.000	0.000	NA		NA
1295532	567300		PMT0200			FALSE	0.181	-24.000	0.000	NA		NA
1203845	1203846					FALSE	0.038	140.000	0.000	NA		NA
1203846	567302		PMT0202			FALSE	0.256	75.000	0.000	NA		NA
567302	567303	PMT0202	PMT0203			FALSE	0.280	81.000	0.011	NA		NA
567303	567304	PMT0203	PMT0204		cbiQ	TRUE	0.773	4.000	0.029	1.000		NA
567304	567305	PMT0204	PMT0205	cbiQ		TRUE	0.842	18.000	0.447	NA		NA
567305	567306	PMT0205	PMT0206			FALSE	0.683	8.000	0.065	NA		NA
567306	567307	PMT0206	PMT0207			FALSE	0.263	128.000	0.194	NA		NA
567307	567308	PMT0207	PMT0208		proC	TRUE	0.796	-10.000	0.224	1.000		NA
567309	567310	PMT0209	PMT0210			TRUE	0.863	31.000	0.216	1.000	N	NA
567310	567311	PMT0210	PMT0211		recO	FALSE	0.643	-13.000	0.013	1.000	N	NA
567311	567312	PMT0211	PMT0212	recO	deoC	TRUE	0.916	-3.000	0.016	1.000	N	NA
567312	567313	PMT0212	PMT0213	deoC	lrtA	TRUE	0.713	16.000	0.039	NA	N	NA
567314	567315	PMT0214	PMT0215	lipB	fadD	TRUE	0.754	27.000	0.029	1.000	N	NA
567315	567316	PMT0215	PMT0216	fadD		TRUE	0.813	70.000	0.388	NA		NA
567316	567317	PMT0216	PMT0217			FALSE	0.004	519.000	0.000	NA		NA
1362720	1295564			pseudo		FALSE	0.630	2.000	0.000	NA		NA
1203847	567320		PMT0220		pdhC	FALSE	0.074	-43.000	0.000	NA		NA
567321	1203850	PMT0221				FALSE	0.244	76.000	0.000	NA		NA
1203853	567323		PMT0223		queA	FALSE	0.036	143.000	0.000	NA		NA
567324	567325	PMT0224	PMT0225	cysK1		TRUE	0.771	97.000	0.095	0.023	Y	NA
567325	567326	PMT0225	PMT0226		metB	TRUE	0.989	0.000	0.250	0.001	Y	NA
567328	567329	PMT0228	PMT0229			TRUE	0.869	0.000	0.025	NA		NA
567329	567330	PMT0229	PMT0230		murE	FALSE	0.664	29.000	0.049	1.000		NA
567331	567332	PMT0231	PMT0232	yqjL	hupE	FALSE	0.025	166.000	0.000	NA		NA
567332	567333	PMT0232	PMT0233	hupE		FALSE	0.004	486.000	0.000	NA		NA
567334	567335	PMT0234	PMT0235			FALSE	0.391	42.000	0.000	NA		NA
567335	567336	PMT0235	PMT0236			FALSE	0.702	-3.000	0.000	NA		NA
567336	1295765	PMT0236				FALSE	0.121	-31.000	0.000	NA		NA
1295765	1203855					FALSE	0.230	77.000	0.000	NA		NA
1203855	567337		PMT0237			FALSE	0.039	139.000	0.000	NA		NA
567338	567339	PMT0238	PMT0239			FALSE	0.013	214.000	0.000	NA		NA
1203856	1203857					FALSE	0.702	-3.000	0.000	NA		NA
567342	567343	PMT0242	PMT0243			FALSE	0.210	198.000	0.667	NA		NA
567343	567344	PMT0243	PMT0244			FALSE	0.163	224.000	0.667	NA		NA
567345	1203860	PMT0245				FALSE	0.011	240.000	0.000	NA		NA
1203860	1295690					FALSE	0.100	104.000	0.000	NA		NA
1295690	567346		PMT0246			FALSE	0.404	51.000	0.000	NA		NA
567346	567347	PMT0246	PMT0247			FALSE	0.013	218.000	0.000	NA		NA
567347	567348	PMT0247	PMT0248			FALSE	0.358	10.000	0.000	NA		NA
567348	567349	PMT0248	PMT0249			FALSE	0.015	204.000	0.000	NA		NA
567349	567350	PMT0249	PMT0250			FALSE	0.013	452.000	0.000	NA	N	NA
567350	567351	PMT0250	PMT0251			FALSE	0.003	632.000	0.000	NA		NA
567351	1203864	PMT0251				FALSE	0.419	-7.000	0.000	NA		NA
1203864	1295746					FALSE	0.073	116.000	0.000	NA		NA
1295746	1295481					FALSE	0.018	192.000	0.000	NA		NA
567352	567353	PMT0252	PMT0253	lemA		TRUE	0.729	0.000	0.000	NA		NA
1203865	567357		PMT0257		lepA	FALSE	0.006	352.000	0.000	NA		NA
567359	567360	PMT0259	PMT0260			FALSE	0.337	-10.000	0.000	NA		NA
567360	567361	PMT0260	PMT0261			TRUE	0.946	-6.000	1.000	NA		NA
567361	567362	PMT0261	PMT0262			TRUE	0.965	3.000	1.000	NA		NA
567362	567363	PMT0262	PMT0263			FALSE	0.079	300.000	0.000	NA	Y	NA
1295810	1295584					FALSE	0.044	135.000	0.000	NA		NA
1295584	567364		PMT0264			FALSE	0.033	-76.000	0.000	NA		NA
567364	567365	PMT0264	PMT0265			FALSE	0.036	468.000	0.333	NA		NA
567365	567366	PMT0265	PMT0266		dppC	FALSE	0.508	-28.000	0.022	0.075	N	NA
567366	567367	PMT0266	PMT0267	dppC		FALSE	0.596	64.000	0.043	NA		NA
567369	567370	PMT0269	PMT0270		sun	TRUE	0.924	0.000	0.014	1.000	N	NA
567371	567372	PMT0271	PMT0272	mrcB	chlG	TRUE	0.977	-3.000	0.452	1.000	N	NA
567372	567373	PMT0272	PMT0273	chlG		FALSE	0.336	-46.000	0.262	NA		NA
567374	1203868	PMT0274		hisF		FALSE	0.333	13.000	0.000	NA		NA
1203868	567375		PMT0275			TRUE	0.729	0.000	0.000	NA		NA
567375	567376	PMT0275	PMT0276		gerCB	FALSE	0.368	-25.000	0.009	0.012		NA
567376	567377	PMT0276	PMT0277	gerCB		FALSE	0.291	79.000	0.010	NA		NA
567377	1295574	PMT0277				FALSE	0.005	373.000	0.000	NA		NA
567378	567379	PMT0278	PMT0279			FALSE	0.009	266.000	0.000	NA		NA
567383	1203871	PMT0283		glyQ		FALSE	0.075	114.000	0.000	NA		NA
1203871	567384		PMT0284		som	FALSE	0.039	-67.000	0.000	NA		NA
567385	567386	PMT0285	PMT0286		piuC	TRUE	0.855	46.000	0.326	NA		NA
567388	567389	PMT0288	PMT0289			FALSE	0.352	62.000	0.000	NA		NA
567389	1295446	PMT0289				FALSE	0.484	6.000	0.002	NA		NA
1295446	1295844					FALSE	0.216	-18.000	0.000	NA		NA
1295844	567390		RNA_4		tRNA-Ser1	FALSE	0.380	36.000	0.000	NA		NA
567390	567391	RNA_4	PMT0290	tRNA-Ser1		FALSE	0.019	187.000	0.000	NA		NA
1203874	1203875					FALSE	0.333	13.000	0.000	NA		NA
1203875	567393		PMT0292			FALSE	0.004	448.000	0.000	NA		NA
1203876	1203877					FALSE	0.121	-31.000	0.000	NA		NA
1203877	567394		PMT0293			FALSE	0.390	41.000	0.000	NA		NA
567394	1203878	PMT0293				FALSE	0.388	38.000	0.000	NA		NA
1203878	567395		PMT0294			FALSE	0.702	-3.000	0.000	NA		NA
567396	567397	PMT0295	PMT0296			FALSE	0.313	86.000	0.000	0.020		NA
567398	1203879	PMT0297				FALSE	0.110	-33.000	0.000	NA		NA
1203879	567399		PMT0298			TRUE	0.729	0.000	0.000	NA		NA
567399	567400	PMT0298	PMT0299			TRUE	0.973	-3.000	0.667	NA		NA
567400	1295620	PMT0299				FALSE	0.702	-3.000	0.000	NA		NA
567401	1362723	PMT0300			pseudo	FALSE	0.004	484.000	0.000	NA		NA
1362723	567402		PMT0301	pseudo		FALSE	0.003	816.000	0.000	NA		NA
1295667	567405		PMT0304			FALSE	0.380	36.000	0.000	NA		NA
567406	567407	PMT0305	PMT0306			FALSE	0.212	79.000	0.000	NA		NA
567407	567408	PMT0306	PMT0307			FALSE	0.702	-3.000	0.000	NA		NA
567411	567412	PMT0310	PMT0311		wcaJ	TRUE	0.948	31.000	0.344	1.000	Y	NA
1203882	567413		PMT0312		cobD	FALSE	0.367	9.000	0.000	NA		NA
567413	567414	PMT0312	PMT0313	cobD	ilvC	TRUE	0.757	84.000	0.017	1.000	Y	NA
567414	567415	PMT0313	PMT0314	ilvC	clpP3	FALSE	0.327	107.000	0.019	1.000	N	NA
567415	567416	PMT0314	PMT0315	clpP3	clpP4	TRUE	0.916	90.000	0.745	0.005	Y	NA
567416	567417	PMT0315	PMT0316	clpP4		FALSE	0.690	31.000	0.084	NA		NA
807277	567420		RNA_49	ffs	srp	FALSE	0.022	-96.000	0.000	NA		NA
567422	567423	PMT0320	PMT0321	ftsQ		TRUE	0.850	-3.000	0.024	NA		NA
567423	567424	PMT0321	PMT0322		ddlA	FALSE	0.583	16.000	0.046	NA		NA
567424	567425	PMT0322	PMT0323	ddlA		TRUE	0.764	41.000	0.020	1.000	N	NA
567425	567426	PMT0323	PMT0324			FALSE	0.087	108.000	0.000	NA		NA
567426	1295491	PMT0324				FALSE	0.028	-85.000	0.000	NA		NA
1295491	567427		RNA_41		tRNA-His1	FALSE	0.013	-118.000	0.000	NA		NA
567428	567429	PMT0325	PMT0326		codA	TRUE	0.957	-3.000	0.357	NA		NA
567431	567432	PMT0328	PMT0329			FALSE	0.005	388.000	0.000	NA		NA
567432	567433	PMT0329	PMT0330		folC	FALSE	0.571	22.000	0.034	NA		NA
567433	567434	PMT0330	PMT0331	folC	argD	TRUE	0.954	1.000	0.181	1.000	N	NA
567434	567435	PMT0331	RNA_40	argD	tRNA-Leu5	FALSE	0.041	-66.000	0.000	NA		NA
567435	567436	RNA_40	PMT0332	tRNA-Leu5	murA	FALSE	0.333	24.000	0.000	NA		NA
567437	567438	RNA_5	PMT0333	tRNA-Leu1		FALSE	0.358	10.000	0.000	NA		NA
567438	567439	PMT0333	PMT0334		spoU	FALSE	0.678	32.000	0.049	1.000		NA
567439	567440	PMT0334	PMT0335	spoU	lpdA	TRUE	0.855	6.000	0.115	1.000	N	NA
567440	567441	PMT0335	PMT0336	lpdA	trpC	TRUE	0.769	64.000	0.057	1.000	N	NA
567441	567442	PMT0336	PMT0337	trpC		FALSE	0.007	304.000	0.000	NA		NA
567442	567443	PMT0337	PMT0338			FALSE	0.096	105.000	0.000	NA		NA
567444	567445	PMT0339	PMT0340			FALSE	0.443	11.000	0.000	1.000		NA
567445	567446	PMT0340	PMT0341		fkpA	FALSE	0.479	90.000	0.096	1.000		NA
567447	567448	PMT0342	PMT0343		lnt	FALSE	0.005	416.000	0.000	NA		NA
567450	567451	PMT0345	PMT0346			FALSE	0.148	113.000	0.021	NA		NA
567453	567454	PMT0348	PMT0349		ffh	FALSE	0.492	70.000	0.016	1.000		NA
567454	567455	PMT0349	PMT0350	ffh	rpsP	TRUE	0.791	81.000	0.361	1.000	N	NA
567455	567456	PMT0350	PMT0351	rpsP	phoH	TRUE	0.743	9.000	0.019	1.000	N	NA
567456	567457	PMT0351	PMT0352	phoH		FALSE	0.419	77.000	0.024	NA		NA
567457	1295719	PMT0352				FALSE	0.082	110.000	0.000	NA		NA
1295719	1203886					FALSE	0.702	-3.000	0.000	NA		NA
1203886	1203760					FALSE	0.408	6.000	0.000	NA		NA
1203760	1295704					FALSE	0.404	50.000	0.000	NA		NA
1295704	567458		PMT0353			FALSE	0.393	54.000	0.000	NA		NA
567460	567461	PMT0355	PMT0356	era	trmD	FALSE	0.060	178.000	0.010	0.028		NA
567461	567462	PMT0356	PMT0357	trmD		TRUE	0.831	-3.000	0.011	1.000		NA
567462	567463	PMT0357	PMT0358			TRUE	0.912	-3.000	0.070	1.000		NA
567464	567465	PMT0359	PMT0360			TRUE	0.726	66.000	0.167	NA		NA
567465	567466	PMT0360	PMT0361			FALSE	0.230	129.000	0.150	NA		NA
567466	567467	PMT0361	PMT0362		thiS	TRUE	0.816	26.000	0.310	NA		NA
567467	567468	PMT0362	PMT0363	thiS	thiE	TRUE	0.989	-3.000	0.452	1.000	Y	NA
567472	567473	PMT0367	PMT0368	pheS		FALSE	0.343	103.000	0.011	1.000	N	NA
567473	567474	PMT0368	PMT0369			FALSE	0.388	39.000	0.000	NA		NA
567476	567477	PMT0371	PMT0372			FALSE	0.003	924.000	0.000	NA		NA
567477	567478	PMT0372	PMT0373			FALSE	0.150	103.000	0.000	1.000		NA
567478	567479	PMT0373	PMT0374			FALSE	0.684	25.000	0.095	NA		NA
567479	567480	PMT0374	PMT0375		ribD	FALSE	0.696	4.000	0.021	NA		NA
567481	567482	PMT0376	PMT0377			FALSE	0.004	555.000	0.000	NA		NA
567482	1295804	PMT0377				FALSE	0.106	103.000	0.000	NA		NA
1203890	1362725				pseudo	FALSE	0.004	465.000	0.000	NA		NA
1362725	567483		PMT0378	pseudo	ftsH3	FALSE	0.013	224.000	0.000	NA		NA
567483	567484	PMT0378	PMT0379	ftsH3	argF	TRUE	0.773	55.000	0.022	1.000	N	NA
567484	567485	PMT0379	PMT0380	argF	lexA	FALSE	0.180	136.000	0.020	1.000	N	NA
567485	567486	PMT0380	RNA_6	lexA	tRNA-Ala2	FALSE	0.352	62.000	0.000	NA		NA
567486	567487	RNA_6	PMT0381	tRNA-Ala2		FALSE	0.101	-36.000	0.000	NA		NA
567487	567488	PMT0381	PMT0382			FALSE	0.042	136.000	0.000	NA		NA
567489	567490	PMT0383	PMT0384		def	FALSE	0.010	253.000	0.000	NA		NA
567490	567491	PMT0384	PMT0385	def		FALSE	0.053	129.000	0.000	NA		NA
567491	567492	PMT0385	PMT0386		dnaQ	FALSE	0.006	364.000	0.000	NA		NA
567493	567494	PMT0387	PMT0388			FALSE	0.407	-36.000	0.190	NA		NA
567496	567497	PMT0390	PMT0391			FALSE	0.005	375.000	0.000	NA		NA
567498	567499	PMT0392	PMT0393	sds	murI	TRUE	0.727	23.000	0.024	1.000	N	NA
567499	567500	PMT0393	PMT0394	murI	amiC	TRUE	0.974	-3.000	0.022	1.000	Y	NA
567500	567501	PMT0394	PMT0395	amiC		TRUE	0.754	5.000	0.051	1.000		NA
567501	567502	PMT0395	PMT0396			TRUE	0.709	43.000	0.051	1.000		NA
567503	567504	PMT0397	PMT0398	ubiD	aroA	FALSE	0.097	154.000	0.009	NA	N	NA
567504	567505	PMT0398	PMT0399	aroA		FALSE	0.319	-19.000	0.017	NA		NA
567505	567506	PMT0399	PMT0400		glmU	FALSE	0.009	468.000	0.021	NA		NA
567507	567508	PMT0401	PMT0402	murF		TRUE	0.950	0.000	0.238	NA		NA
567508	1295861	PMT0402				FALSE	0.408	6.000	0.000	NA		NA
1295861	567509		PMT0403		glgA	FALSE	0.419	-7.000	0.000	NA		NA
567509	567510	PMT0403	PMT0404	glgA		FALSE	0.629	60.000	0.045	NA		NA
567510	567511	PMT0404	PMT0405		menB	FALSE	0.553	22.000	0.027	NA		NA
567511	567512	PMT0405	PMT0406	menB	menD	TRUE	0.949	6.000	0.147	0.001	Y	NA
567513	567514	PMT0407	PMT0408	lepB		TRUE	0.837	16.000	0.423	NA		NA
567515	567516	PMT0409	PMT0410			FALSE	0.388	55.000	0.000	NA		NA
567516	567517	PMT0410	PMT0411			FALSE	0.004	574.000	0.000	NA		NA
567517	567518	PMT0411	PMT0412			FALSE	0.005	399.000	0.000	NA		NA
567518	567519	PMT0412	PMT0413			TRUE	0.826	-9.000	0.093	1.000	N	NA
567519	567520	PMT0413	PMT0414			TRUE	0.962	2.000	0.350	1.000	N	NA
567520	567521	PMT0414	PMT0415			FALSE	0.328	23.000	0.000	NA		NA
567521	567522	PMT0415	PMT0416			FALSE	0.012	226.000	0.000	NA		NA
567522	567523	PMT0416	PMT0417			TRUE	0.993	-3.000	0.857	1.000	Y	NA
567523	567524	PMT0417	PMT0418			TRUE	0.994	0.000	0.894	1.000	Y	NA
567524	567525	PMT0418	PMT0419		psbA	FALSE	0.049	147.000	0.000	1.000		NA
567525	567526	PMT0419	PMT0420	psbA		FALSE	0.027	156.000	0.000	NA		NA
567527	567528	PMT0421	PMT0422		trpS	TRUE	0.744	4.000	0.034	NA		NA
567528	1295741	PMT0422		trpS		FALSE	0.014	209.000	0.000	NA		NA
1295741	567529		PMT0423			FALSE	0.012	-136.000	0.000	NA		NA
567530	1203895	PMT0424		thrS		FALSE	0.372	34.000	0.000	NA		NA
567531	567532	PMT0425	PMT0426	glk	thrB	FALSE	0.681	15.000	0.013	1.000	N	NA
567532	567533	PMT0426	PMT0427	thrB	ndhD	FALSE	0.159	150.000	0.031	1.000	N	NA
567533	567534	PMT0427	PMT0428	ndhD	prlC	TRUE	0.949	4.000	0.444	1.000	N	NA
567534	567535	PMT0428	PMT0429	prlC		TRUE	0.786	5.000	0.111	NA		NA
1208228	1203899					FALSE	0.009	267.000	0.000	NA		NA
1203899	567537		PMT0431			FALSE	0.404	50.000	0.000	NA		NA
567537	567538	PMT0431	PMT0432			TRUE	0.895	21.000	0.833	NA		NA
567538	567539	PMT0432	PMT0433			TRUE	0.789	47.000	0.162	NA		NA
567539	567540	PMT0433	PMT0434			FALSE	0.690	59.000	0.073	NA		NA
567540	567541	PMT0434	PMT0435		folB	FALSE	0.675	43.000	0.027	1.000		NA
567541	567542	PMT0435	PMT0436	folB	proA	FALSE	0.400	-33.000	0.023	1.000	N	NA
567542	567543	PMT0436	PMT0437	proA		TRUE	0.729	35.000	0.012	1.000	N	NA
567543	567544	PMT0437	PMT0438			FALSE	0.657	5.000	0.023	NA		NA
567545	567546	PMT0439	PMT0440			TRUE	0.812	-10.000	0.317	NA		NA
567546	567547	PMT0440	PMT0441			TRUE	0.879	67.000	0.684	NA		NA
567547	567548	PMT0441	PMT0442			TRUE	0.895	-10.000	0.760	NA		NA
567548	567549	PMT0442	PMT0443			FALSE	0.343	-45.000	0.240	NA		NA
567549	567550	PMT0443	PMT0444		glgB	FALSE	0.405	101.000	0.146	NA		NA
567550	567551	PMT0444	PMT0445	glgB	hemE	FALSE	0.332	110.000	0.024	1.000	N	NA
567551	567552	PMT0445	PMT0446	hemE		TRUE	0.933	-3.000	0.032	1.000	N	NA
567552	567553	PMT0446	PMT0447		petE	TRUE	0.900	29.000	0.404	1.000	N	NA
567553	567554	PMT0447	PMT0448	petE		FALSE	0.048	198.000	0.043	NA		NA
567554	567555	PMT0448	PMT0449		clpB1	FALSE	0.005	430.000	0.000	NA		NA
567556	567557	PMT0450	PMT0451			FALSE	0.006	334.000	0.000	NA		NA
567558	567559	PMT0452	PMT0453		hisI	FALSE	0.020	185.000	0.000	NA		NA
567560	567561	PMT0454	PMT0455			TRUE	0.766	6.000	0.123	NA		NA
1295681	567562		PMT0456		sigB	FALSE	0.028	155.000	0.000	NA		NA
567562	567563	PMT0456	PMT0457	sigB		FALSE	0.627	111.000	0.905	NA		NA
567563	567564	PMT0457	PMT0458			TRUE	0.978	0.000	0.714	NA		NA
567564	567565	PMT0458	PMT0459			TRUE	0.917	6.000	0.688	NA		NA
567565	567566	PMT0459	PMT0460			TRUE	0.724	30.000	0.126	NA		NA
567571	567572	PMT0465	PMT0466	trpA		TRUE	0.872	47.000	0.375	NA		NA
567572	567573	PMT0466	PMT0467			TRUE	0.830	-19.000	0.925	NA		NA
1295566	567576		PMT0469		ECM27	FALSE	0.052	130.000	0.000	NA		NA
1295768	1203901					FALSE	0.316	18.000	0.000	NA		NA
1203901	567578		PMT0471			FALSE	0.067	-45.000	0.000	NA		NA
567578	567579	PMT0471	PMT0472			TRUE	0.896	0.000	0.054	NA		NA
567580	567581	PMT0473	PMT0474		gadA	FALSE	0.042	-64.000	0.000	NA		NA
567582	567583	PMT0475	PMT0476			FALSE	0.053	129.000	0.000	NA		NA
567583	567584	PMT0476	PMT0477			FALSE	0.702	-3.000	0.000	NA		NA
567584	567585	PMT0477	PMT0478			FALSE	0.031	150.000	0.000	NA		NA
1203903	567587		PMT0480			FALSE	0.140	94.000	0.000	NA		NA
567587	567588	PMT0480	PMT0481			FALSE	0.003	902.000	0.000	NA		NA
567588	567589	PMT0481	PMT0482			FALSE	0.005	385.000	0.000	NA		NA
567589	567590	PMT0482	PMT0483			FALSE	0.005	384.000	0.000	NA		NA
567590	1203904	PMT0483				FALSE	0.419	-7.000	0.000	NA		NA
1203904	1362726				pseudo	FALSE	0.003	779.000	0.000	NA		NA
1362726	567591		PMT0484	pseudo		FALSE	0.449	5.000	0.000	NA		NA
567591	1295841	PMT0484				FALSE	0.189	82.000	0.000	NA		NA
567592	567593	PMT0485	PMT0486			FALSE	0.007	327.000	0.000	NA		NA
567593	1203905	PMT0486				FALSE	0.018	191.000	0.000	NA		NA
1203905	567594		PMT0487			FALSE	0.009	272.000	0.000	NA		NA
567594	567595	PMT0487	PMT0488			FALSE	0.380	57.000	0.000	NA		NA
567596	567597	RNA_39	PMT0489	tRNA-Pro3		FALSE	0.323	15.000	0.000	NA		NA
567597	1203907	PMT0489				FALSE	0.019	-103.000	0.000	NA		NA
1203907	1295828					FALSE	0.067	-45.000	0.000	NA		NA
567598	567599	PMT0490	PMT0491			FALSE	0.373	58.000	0.000	NA		NA
567600	567601	PMT0492	PMT0493	msrA		FALSE	0.008	1077.000	0.038	NA		NA
1203909	567602		PMT0494			FALSE	0.006	354.000	0.000	NA		NA
567602	567603	PMT0494	PMT0495			FALSE	0.004	527.000	0.000	NA		NA
1295609	567605		PMT0497			FALSE	0.004	495.000	0.000	NA		NA
567605	567606	PMT0497	PMT0498			TRUE	0.789	11.000	0.235	NA		NA
567609	567610	PMT0501	PMT0502	futC		TRUE	0.800	0.000	0.000	1.000		NA
567611	567612	PMT0503	PMT0504		nth	FALSE	0.011	235.000	0.000	NA		NA
567613	1295860	PMT0505				FALSE	0.056	127.000	0.000	NA		NA
567614	567615	PMT0506	PMT0507	ycf39		TRUE	0.798	27.000	0.256	NA		NA
1203915	567617		PMT0509		cytA	FALSE	0.212	79.000	0.000	NA		NA
567618	567619	PMT0510	PMT0511	rimI		FALSE	0.106	103.000	0.000	NA		NA
567619	567620	PMT0511	PMT0512			TRUE	0.921	-3.000	0.132	NA		NA
567621	567622	PMT0513	PMT0514		MTG10.17	FALSE	0.006	358.000	0.000	NA		NA
567625	1295614	PMT0517				FALSE	0.401	46.000	0.000	NA		NA
567628	567629	PMT0520	PMT0521	hisA		FALSE	0.682	66.000	0.014	1.000	N	NA
567629	567630	PMT0521	PMT0522			TRUE	0.818	72.000	0.444	NA		NA
567630	567631	PMT0522	PMT0523			TRUE	0.739	33.000	0.131	NA		NA
567631	567632	PMT0523	PMT0524			FALSE	0.513	82.000	0.111	NA		NA
567633	567634	PMT0525	PMT0526			FALSE	0.668	6.000	0.042	NA		NA
567634	567635	PMT0526	PMT0527			FALSE	0.571	21.000	0.038	NA		NA
567635	567636	PMT0527	PMT0528			TRUE	0.841	6.000	0.264	NA		NA
567636	567637	PMT0528	PMT0529		proB	TRUE	0.852	-3.000	0.025	NA		NA
567637	567638	PMT0529	PMT0530	proB	lpxD	TRUE	0.782	57.000	0.029	1.000	N	NA
567638	567639	PMT0530	PMT0531	lpxD	leuB	TRUE	0.805	38.000	0.052	1.000	N	NA
567639	567640	PMT0531	PMT0532	leuB	prk	TRUE	0.735	98.000	0.074	1.000	Y	NA
567640	567641	PMT0532	PMT0533	prk		FALSE	0.018	386.000	0.000	1.000	N	NA
567641	567642	PMT0533	PMT0534		accD	FALSE	0.080	188.000	0.013	1.000	N	NA
567642	567643	PMT0534	PMT0535	accD		FALSE	0.542	45.000	0.016	NA		NA
567643	567644	PMT0535	PMT0536			TRUE	0.761	10.000	0.169	NA		NA
567644	567645	PMT0536	PMT0537		cbbA	FALSE	0.313	121.000	0.169	1.000		NA
567646	567647	PMT0538	PMT0539		purQ	TRUE	0.717	7.000	0.015	NA	N	NA
567647	567648	PMT0539	PMT0540	purQ	purS	TRUE	0.971	8.000	0.656	0.002	Y	NA
567648	567649	PMT0540	PMT0541	purS		FALSE	0.019	378.000	0.000	1.000	N	NA
567649	1203921	PMT0541				FALSE	0.004	547.000	0.000	NA		NA
567651	1203922	PMT0543				FALSE	0.384	37.000	0.000	NA		NA
1203923	567652		PMT0544			FALSE	0.022	180.000	0.000	NA		NA
1203924	1362727				pseudo	FALSE	0.060	124.000	0.000	NA		NA
1362727	567653		PMT0545	pseudo		FALSE	0.348	11.000	0.000	NA		NA
567653	1203762	PMT0545				FALSE	0.014	212.000	0.000	NA		NA
1203925	567654		PMT0546			FALSE	0.003	867.000	0.000	NA		NA
567654	1203926	PMT0546				FALSE	0.008	281.000	0.000	NA		NA
1203926	567655		PMT0547			FALSE	0.166	87.000	0.000	NA		NA
567656	1295545	PMT0548				FALSE	0.398	53.000	0.000	NA		NA
1295545	567657		PMT0549			FALSE	0.006	356.000	0.000	NA		NA
567657	567658	PMT0549	PMT0550			FALSE	0.004	476.000	0.000	NA		NA
567658	1203928	PMT0550				FALSE	0.264	-15.000	0.000	NA		NA
1203928	567659		PMT0551		sdmt	FALSE	0.009	277.000	0.000	NA		NA
567659	567660	PMT0551	PMT0552	sdmt	gsmt	TRUE	0.849	45.000	0.191	0.011		NA
1295557	567661		PMT0553		proV	FALSE	0.020	183.000	0.000	NA		NA
567661	567662	PMT0553	PMT0554	proV	proW	TRUE	0.992	-3.000	0.600	0.067	Y	NA
567662	567663	PMT0554	PMT0555	proW		TRUE	0.985	-3.000	0.188	0.028	Y	NA
567664	567665	PMT0556	PMT0557	cobW		FALSE	0.333	24.000	0.000	NA		NA
567666	567667	PMT0558	PMT0559	upp		FALSE	0.544	25.000	0.023	NA		NA
567667	567668	PMT0559	PMT0560		ilvD	TRUE	0.782	41.000	0.165	NA		NA
567669	567670	PMT0561	PMT0562			FALSE	0.084	264.000	0.358	NA		NA
567672	567673	PMT0564	PMT0565		gnd	TRUE	0.916	11.000	0.046	0.002	Y	NA
567673	1203932	PMT0565		gnd		FALSE	0.273	73.000	0.000	NA		NA
1203932	567674		PMT0566		glgC	FALSE	0.702	-3.000	0.000	NA		NA
567674	567675	PMT0566	PMT0567	glgC	hemA	FALSE	0.267	124.000	0.027	1.000	N	NA
567675	567676	PMT0567	PMT0568	hemA	glpX	TRUE	0.776	32.000	0.038	1.000	N	NA
567678	567679	PMT0570	PMT0571	ccmC		TRUE	0.765	40.000	0.105	1.000		NA
567679	567680	PMT0571	PMT0572			TRUE	0.880	-3.000	0.026	1.000		NA
567680	567681	PMT0572	PMT0573			TRUE	0.860	-3.000	0.027	NA		NA
567681	567682	PMT0573	PMT0574			TRUE	0.705	52.000	0.066	NA		NA
567682	567683	PMT0574	PMT0575		typA	FALSE	0.576	6.000	0.019	NA		NA
567683	567684	PMT0575	PMT0576	typA		FALSE	0.135	146.000	0.011	1.000	N	NA
1295448	567685		PMT0577		chlP	FALSE	0.384	37.000	0.000	NA		NA
567688	1203933	PMT0580		ddpX		FALSE	0.018	190.000	0.000	NA		NA
1203933	567689		PMT0581		recG	FALSE	0.372	34.000	0.000	NA		NA
567689	567690	PMT0581	PMT0582	recG		FALSE	0.132	-51.000	0.029	NA		NA
567690	567691	PMT0582	PMT0583		tsf	FALSE	0.459	24.000	0.014	NA		NA
567691	567692	PMT0583	PMT0584	tsf	rps2	TRUE	0.801	83.000	0.748	1.000		NA
567692	567693	PMT0584	PMT0585	rps2		FALSE	0.066	141.000	0.017	NA		NA
567693	567694	PMT0585	PMT0586			FALSE	0.564	90.000	0.234	NA		NA
567694	567695	PMT0586	PMT0587			TRUE	0.916	38.000	0.800	NA		NA
567695	567696	PMT0587	PMT0588			TRUE	0.972	43.000	0.769	1.000	Y	NA
567696	567697	PMT0588	PMT0589			TRUE	0.993	0.000	0.769	NA	Y	NA
567697	567698	PMT0589	PMT0590		pcyA	TRUE	0.847	21.000	0.455	NA		NA
567699	567700	PMT0591	PMT0592			FALSE	0.219	-96.000	0.352	0.006		NA
567702	567703	PMT0594	PMT0595		lspA	TRUE	0.970	-3.000	0.554	NA		NA
567703	567704	PMT0595	PMT0596	lspA		FALSE	0.014	207.000	0.000	NA		NA
567704	567705	PMT0596	PMT0597			FALSE	0.702	-3.000	0.000	NA		NA
1203936	567707		PMT0599		cumB	FALSE	0.393	54.000	0.000	NA		NA
567708	1362728	PMT0600		spt	pseudo	FALSE	0.015	204.000	0.000	NA		NA
567710	567711	PMT0602	PMT0603			TRUE	0.970	-3.000	0.550	NA		NA
567711	567712	PMT0603	PMT0604		psb28	TRUE	0.838	71.000	0.488	NA		NA
567712	567713	PMT0604	PMT0605	psb28		FALSE	0.670	26.000	0.077	NA		NA
567714	567715	PMT0606	PMT0607		rsbW	TRUE	0.750	65.000	0.194	NA		NA
567716	567717	PMT0608	PMT0609			FALSE	0.021	181.000	0.000	NA		NA
567719	567720	PMT0611	PMT0612			FALSE	0.478	97.000	0.196	NA		NA
1203937	1203938					FALSE	0.167	-25.000	0.000	NA		NA
567721	1203941	PMT0613				FALSE	0.005	413.000	0.000	NA		NA
567723	567724	PMT0615	PMT0616		secF	TRUE	0.726	-7.000	0.069	NA		NA
567724	567725	PMT0616	PMT0617	secF	secD	TRUE	0.981	4.000	0.516	0.001	Y	NA
567725	567726	PMT0617	PMT0618	secD	pdhB	TRUE	0.892	4.000	0.091	1.000	N	NA
567726	1203763	PMT0618		pdhB		FALSE	0.342	63.000	0.000	NA		NA
1203763	567727		PMT0619			FALSE	0.401	46.000	0.000	NA		NA
567727	567728	PMT0619	PMT0620		ispE	TRUE	0.968	-3.000	0.488	NA		NA
567728	567729	PMT0620	PMT0621	ispE	ksgA	TRUE	0.918	-3.000	0.016	1.000	N	NA
567729	1295508	PMT0621		ksgA		FALSE	0.512	4.000	0.000	NA		NA
1295480	567731		PMT0623		gdhA	FALSE	0.033	147.000	0.000	NA		NA
567731	567732	PMT0623	PMT0624	gdhA		FALSE	0.036	252.000	0.000	1.000	N	NA
567733	567734	PMT0625	PMT0626			FALSE	0.012	232.000	0.000	NA		NA
567734	567735	PMT0626	PMT0627			FALSE	0.328	23.000	0.000	NA		NA
567735	1295562	PMT0627				FALSE	0.009	270.000	0.000	NA		NA
567738	567739	PMT0630	PMT0631			FALSE	0.007	322.000	0.000	NA		NA
567740	567741	PMT0632	PMT0633			FALSE	0.006	359.000	0.000	NA		NA
567741	567742	PMT0633	PMT0634			FALSE	0.013	224.000	0.000	NA		NA
567742	567743	PMT0634	PMT0635		umuD	FALSE	0.026	164.000	0.000	NA		NA
1295821	567744		PMT0636			FALSE	0.348	11.000	0.000	NA		NA
567744	567745	PMT0636	PMT0637			FALSE	0.390	41.000	0.000	NA		NA
567747	567748	PMT0639	PMT0640			TRUE	0.892	40.000	0.500	NA		NA
567748	567749	PMT0640	PMT0641		dnaG	FALSE	0.006	346.000	0.000	NA		NA
567749	567750	PMT0641	PMT0642	dnaG		FALSE	0.057	186.000	0.000	NA	N	NA
1203948	567751		PMT0643			FALSE	0.316	18.000	0.000	NA		NA
567751	567752	PMT0643	PMT0644		ruvA	FALSE	0.004	1285.000	0.000	1.000		NA
567752	567753	PMT0644	PMT0645	ruvA	rps15	TRUE	0.754	59.000	0.021	1.000	N	NA
567753	567754	PMT0645	PMT0646	rps15		FALSE	0.636	37.000	0.037	NA		NA
567755	567756	PMT0647	PMT0648	dnaE	gatA	FALSE	0.595	77.000	0.019	1.000	N	NA
567756	567757	PMT0648	PMT0649	gatA		FALSE	0.584	37.000	0.022	NA		NA
567757	567758	PMT0649	PMT0650			TRUE	0.863	-3.000	0.031	NA		NA
567758	567759	PMT0650	PMT0651			TRUE	0.780	15.000	0.150	0.007		NA
567759	567760	PMT0651	PMT0652			TRUE	0.926	-3.000	0.113	1.000		NA
567760	567761	PMT0652	PMT0653		carA	FALSE	0.211	131.000	0.020	1.000	N	NA
567761	567762	PMT0653	PMT0654	carA	trpD/G	TRUE	0.896	31.000	0.021	1.000	Y	NA
1295728	567763		PMT0655			FALSE	0.010	261.000	0.000	NA		NA
567767	567768	PMT0659	PMT0660			FALSE	0.045	134.000	0.000	NA		NA
567770	1203764	PMT0662				FALSE	0.009	-773.000	0.000	NA		NA
1203764	567771		PMT0663			TRUE	0.805	-6.000	0.123	NA		NA
567771	567772	PMT0663	PMT0664			FALSE	0.009	278.000	0.000	NA		NA
567776	567777	PMT0668	PMT0669	lacF	purK	TRUE	0.796	40.000	0.040	1.000	N	NA
567779	567780	PMT0671	PMT0672			FALSE	0.023	769.000	0.255	NA		NA
567781	1295479	PMT0673		petN		FALSE	0.630	2.000	0.000	NA		NA
1295479	1203951					FALSE	0.345	28.000	0.000	NA		NA
1203951	567782		PMT0674			FALSE	0.011	-145.000	0.000	NA		NA
567785	567786	PMT0677	PMT0678	ftsH1	salY	FALSE	0.083	321.000	0.282	1.000	N	NA
567786	567787	PMT0678	PMT0679	salY	pykF	TRUE	0.925	7.000	0.476	1.000	N	NA
567788	567789	PMT0680	PMT0681			TRUE	0.942	-3.000	0.231	NA		NA
567790	567791	PMT0682	PMT0683			FALSE	0.581	27.000	0.029	NA		NA
567791	567792	PMT0683	PMT0684		ilvA	TRUE	0.761	38.000	0.028	NA	N	NA
567793	567794	PMT0685	PMT0686	Dxs		TRUE	0.864	5.000	0.090	1.000	N	NA
567795	567796	PMT0687	PMT0688	psaK		TRUE	0.804	69.000	0.357	NA		NA
567796	567797	PMT0688	PMT0689			TRUE	0.972	-3.000	0.625	NA		NA
567799	567800	PMT0691	PMT0692			TRUE	0.956	-3.000	0.092	0.027	N	NA
567800	567801	PMT0692	PMT0693			TRUE	0.980	-3.000	0.064	0.027	Y	NA
567801	567802	PMT0693	PMT0694			TRUE	0.993	-3.000	0.692	0.027	Y	NA
567802	1362729	PMT0694			pseudo	FALSE	0.578	3.000	0.000	NA		NA
1362729	567803		PMT0695	pseudo	rpl28	FALSE	0.403	47.000	0.000	NA		NA
567803	567804	PMT0695	PMT0696	rpl28	htpG	FALSE	0.693	67.000	0.019	1.000	N	NA
567804	567805	PMT0696	PMT0697	htpG		FALSE	0.442	91.000	0.011	1.000	N	NA
567805	567806	PMT0697	PMT0698		hisS	TRUE	0.772	36.000	0.024	1.000	N	NA
567806	567807	PMT0698	PMT0699	hisS	suhB	TRUE	0.743	23.000	0.032	1.000	N	NA
567809	567810	PMT0700	PMT0701	pstB	pstA	TRUE	0.967	69.000	0.952	0.003	Y	NA
567810	567811	PMT0701	PMT0702	pstA	pstC	TRUE	0.988	2.000	0.541	0.003	Y	NA
567812	567813	PMT0703	PMT0704	dnaK	dnaJ2	TRUE	0.938	-16.000	0.488	0.006	Y	NA
567813	567814	PMT0704	PMT0705	dnaJ2		TRUE	0.896	52.000	0.488	NA		NA
567814	567815	PMT0705	PMT0706			TRUE	0.953	3.000	0.634	NA		NA
567815	567816	PMT0706	PMT0707			FALSE	0.027	263.000	0.022	1.000		NA
567819	1203955	PMT0710		purN		FALSE	0.404	49.000	0.000	NA		NA
567820	567821	PMT0711	PMT0712			FALSE	0.379	-18.000	0.013	1.000		NA
567824	1203765	PMT0715		leuS		FALSE	0.472	58.000	0.009	NA		NA
567825	1203956	PMT0716		dapF		FALSE	0.135	95.000	0.000	NA		NA
1203956	567826		PMT0717		nifS	FALSE	0.285	-13.000	0.000	NA		NA
567826	567827	PMT0717	PMT0718	nifS		TRUE	0.846	38.000	0.324	NA		NA
567827	567828	PMT0718	PMT0719			FALSE	0.061	283.000	0.268	NA		NA
567828	567829	PMT0719	PMT0720		dacB	TRUE	0.904	-3.000	0.083	NA		NA
567830	567831	PMT0721	PMT0722		coaD	FALSE	0.604	21.000	0.055	NA		NA
567832	567833	PMT0723	PMT0724		uvrC	FALSE	0.153	-43.000	0.015	1.000		NA
567833	567834	PMT0724	PMT0725	uvrC		FALSE	0.399	67.000	0.008	NA		NA
567834	567835	PMT0725	PMT0726			FALSE	0.681	-7.000	0.044	NA		NA
567837	567838	PMT0728	PMT0729	ilvE	metH	TRUE	0.909	58.000	0.036	1.000	Y	NA
1295788	567840		PMT0731			FALSE	0.003	936.000	0.000	NA		NA
567840	567841	PMT0731	PMT0732		apa2	TRUE	0.850	-10.000	0.212	1.000	N	NA
567841	567842	PMT0732	PMT0733	apa2		FALSE	0.232	86.000	0.000	1.000		NA
567842	567843	PMT0733	PMT0734			FALSE	0.553	63.000	0.000	0.005		NA
567843	567844	PMT0734	PMT0735			FALSE	0.017	200.000	0.000	NA		NA
567844	567845	PMT0735	PMT0736			FALSE	0.348	29.000	0.000	NA		NA
567845	567846	PMT0736	PMT0737		trmA	FALSE	0.004	1260.000	0.000	1.000		NA
567848	567849	PMT0739	PMT0740	rpl33	rps18	TRUE	0.924	39.000	0.037	0.022	Y	NA
567849	567850	PMT0740	PMT0741	rps18		TRUE	0.931	-3.000	0.027	1.000	N	NA
1295567	567852		PMT0743		metG	FALSE	0.006	350.000	0.000	NA		NA
567852	567853	PMT0743	PMT0744	metG		TRUE	0.835	0.000	0.018	NA		NA
567855	567856	PMT0746	PMT0747			FALSE	0.372	34.000	0.000	NA		NA
567856	567857	PMT0747	PMT0748			FALSE	0.348	11.000	0.000	NA		NA
567857	567858	PMT0748	PMT0749		cobU/cobP	FALSE	0.574	-13.000	0.035	1.000		NA
567858	567859	PMT0749	PMT0750	cobU/cobP	cspR	TRUE	0.935	-3.000	0.039	1.000	N	NA
567859	567860	PMT0750	PMT0751	cspR		FALSE	0.207	120.000	0.000	1.000	N	NA
567860	567861	PMT0751	RNA_9		tRNA-Met1	FALSE	0.388	38.000	0.000	NA		NA
567861	567862	RNA_9	PMT0752	tRNA-Met1		FALSE	0.003	691.000	0.000	NA		NA
567865	567866	PMT0755	PMT0756		ftsH4	FALSE	0.676	18.000	0.048	0.053		NA
567868	567869	PMT0758	PMT0759			FALSE	0.416	-37.000	0.243	NA		NA
567869	567870	PMT0759	PMT0760			TRUE	0.887	-3.000	0.059	NA		NA
567870	1295680	PMT0760				FALSE	0.578	3.000	0.000	NA		NA
567871	567872	PMT0761	PMT0762	recJ		TRUE	0.909	-3.000	0.009	1.000	N	NA
567872	567873	PMT0762	PMT0763			FALSE	0.056	195.000	0.058	NA		NA
567873	567874	PMT0763	PMT0764			FALSE	0.680	53.000	0.055	NA		NA
567874	567875	PMT0764	PMT0765			TRUE	0.731	9.000	0.055	0.063		NA
567875	567876	PMT0765	PMT0766		zam	FALSE	0.484	119.000	0.439	1.000		NA
567876	567877	PMT0766	PMT0767	zam	ubiX	TRUE	0.917	4.000	0.188	1.000	N	NA
567877	567878	PMT0767	PMT0768	ubiX		TRUE	0.921	-3.000	0.135	NA		NA
567878	567879	PMT0768	PMT0769			TRUE	0.706	79.000	0.333	NA		NA
567879	567880	PMT0769	PMT0770		tldD	FALSE	0.033	169.000	0.005	NA		NA
567880	567881	PMT0770	PMT0771	tldD	pmbA	TRUE	0.933	0.000	0.146	NA		NA
567881	567882	PMT0771	PMT0772	pmbA	fmt	TRUE	0.723	3.000	0.018	NA		NA
567882	567883	PMT0772	PMT0773	fmt		FALSE	0.015	204.000	0.000	NA		NA
567883	567884	PMT0773	PMT0774		hcaE	FALSE	0.003	897.000	0.000	NA		NA
567884	567885	PMT0774	PMT0775	hcaE	mfd	FALSE	0.111	147.000	0.000	1.000	N	NA
567885	1203963	PMT0775		mfd		FALSE	0.244	82.000	0.003	NA		NA
567886	567887	PMT0776	PMT0777		gcpE	TRUE	0.782	38.000	0.026	1.000	N	NA
567887	567888	PMT0777	PMT0778	gcpE		TRUE	0.926	-3.000	0.022	1.000	N	NA
567889	567890	PMT0779	PMT0780	aspC	phnD	TRUE	0.856	24.000	0.238	1.000	N	NA
567890	567891	PMT0780	PMT0781	phnD		TRUE	0.992	-3.000	0.690	1.000	Y	NA
567891	567892	PMT0781	PMT0782			TRUE	0.992	-3.000	0.696	1.000	Y	NA
567892	567893	PMT0782	PMT0783		tesA	TRUE	0.860	23.000	0.264	1.000	N	NA
567893	567894	PMT0783	PMT0784	tesA		TRUE	0.745	74.000	0.100	1.000	N	NA
567896	567897	PMT0786	PMT0787			TRUE	0.857	9.000	0.388	NA		NA
567899	567900	PMT0789	PMT0790			TRUE	0.824	39.000	0.250	NA		NA
567900	567901	PMT0790	PMT0791		prfC	FALSE	0.308	77.000	0.009	NA		NA
567901	567902	PMT0791	PMT0792	prfC		FALSE	0.014	378.000	0.021	1.000		NA
567903	567904	PMT0793	PMT0794	nrdJ		FALSE	0.023	173.000	0.000	NA		NA
567904	567905	PMT0794	PMT0795			FALSE	0.006	357.000	0.000	NA		NA
567907	1203967	RNA_10		tRNA-Ser3		FALSE	0.037	-72.000	0.000	NA		NA
1203967	1295794					FALSE	0.392	7.000	0.000	NA		NA
567908	567909	PMT0797	PMT0798			FALSE	0.011	804.000	0.000	1.000	N	NA
567909	567910	PMT0798	PMT0799			FALSE	0.003	667.000	0.000	NA		NA
567910	567911	PMT0799	PMT0800			FALSE	0.220	78.000	0.000	NA		NA
567913	1203968	PMT0802		som		FALSE	0.039	-67.000	0.000	NA		NA
1203968	567914		PMT0803			FALSE	0.013	221.000	0.000	NA		NA
567914	567915	PMT0803	PMT0804			FALSE	0.170	133.000	0.066	1.000		NA
567915	567916	PMT0804	PMT0805			TRUE	0.994	0.000	0.900	1.000	Y	NA
567918	567919	PMT0807	PMT0808			FALSE	0.050	131.000	0.000	NA		NA
567919	567920	PMT0808	PMT0809			TRUE	0.956	0.000	0.286	NA		NA
567922	567923	PMT0811	PMT0812		ubiH	TRUE	0.858	22.000	0.485	NA		NA
567924	567925	PMT0813	PMT0814		dapB	FALSE	0.540	18.000	0.027	NA		NA
567927	567928	PMT0816	PMT0817	folP	tpi	FALSE	0.291	-46.000	0.039	1.000	N	NA
567928	567929	PMT0817	PMT0818	tpi		FALSE	0.532	34.000	0.005	1.000		NA
567930	567931	PMT0819	PMT0820			FALSE	0.633	57.000	0.037	NA		NA
1203970	1203972					FALSE	0.010	244.000	0.000	NA		NA
1203972	567932		PMT0821			FALSE	0.408	6.000	0.000	NA		NA
567932	567933	PMT0821	PMT0822		carB	FALSE	0.380	36.000	0.000	NA		NA
567934	567935	PMT0823	PMT0824			FALSE	0.351	-19.000	0.021	NA		NA
567936	567937	PMT0825	RNA_11	ansA	tRNA-Met2	FALSE	0.404	49.000	0.000	NA		NA
567939	1203973	PMT0827				FALSE	0.384	37.000	0.000	NA		NA
567941	1362730	PMT0829			pseudo	TRUE	0.729	0.000	0.000	NA		NA
567942	567943	PMT0830	PMT0831			FALSE	0.333	13.000	0.000	NA		NA
567943	1203766	PMT0831				FALSE	0.003	637.000	0.000	NA		NA
1203974	567945		PMT0833			FALSE	0.048	132.000	0.000	NA		NA
567945	567946	PMT0833	PMT0834			FALSE	0.313	67.000	0.000	NA		NA
567946	567947	PMT0834	PMT0835			FALSE	0.007	310.000	0.000	NA		NA
567947	1203767	PMT0835				FALSE	0.004	612.000	0.000	NA		NA
567948	1362731	PMT0836			pseudo	FALSE	0.408	6.000	0.000	NA		NA
567950	1203975	PMT0838				FALSE	0.323	15.000	0.000	NA		NA
567951	1203976	PMT0839				FALSE	0.266	74.000	0.000	NA		NA
1295568	567952		PMT0840			FALSE	0.028	-85.000	0.000	NA		NA
567954	1203978	PMT0842				FALSE	0.004	549.000	0.000	NA		NA
1203978	567955		PMT0843			FALSE	0.035	145.000	0.000	NA		NA
567956	1203980	PMT0844				FALSE	0.004	522.000	0.000	NA		NA
1203980	567957		PMT0845			FALSE	0.702	-3.000	0.000	NA		NA
1362732	567958		PMT0846	pseudo		FALSE	0.003	3113.000	0.000	NA		NA
567958	1295579	PMT0846				FALSE	0.007	324.000	0.000	NA		NA
1295579	567959		PMT0847			FALSE	0.003	703.000	0.000	NA		NA
567960	567961	PMT0848	PMT0849	ndhF		FALSE	0.008	286.000	0.000	NA		NA
567962	1295781	PMT0850				FALSE	0.003	684.000	0.000	NA		NA
1295781	567963		PMT0851			FALSE	0.004	538.000	0.000	NA		NA
567966	1203986	PMT0854				FALSE	0.005	406.000	0.000	NA		NA
1203986	567967		PMT0855		pncA	FALSE	0.006	341.000	0.000	NA		NA
567967	567968	PMT0855	PMT0856	pncA	mscL	FALSE	0.087	163.000	0.000	1.000	N	NA
567969	1203988	PMT0857				FALSE	0.007	313.000	0.000	NA		NA
1203988	567970		PMT0858		fur	FALSE	0.018	-105.000	0.000	NA		NA
567971	567972	PMT0859	PMT0860			FALSE	0.702	-3.000	0.000	NA		NA
567974	567975	PMT0862	PMT0863		stpA	FALSE	0.014	585.000	0.059	1.000		NA
567977	567978	PMT0865	PMT0866	sbcC	sbcD	TRUE	0.951	8.000	0.312	1.000	Y	NA
567979	567980	PMT0867	PMT0868			FALSE	0.003	891.000	0.000	NA		NA
567980	567981	PMT0868	PMT0869			TRUE	0.863	3.000	0.114	NA		NA
567981	1295583	PMT0869				FALSE	0.142	-28.000	0.000	NA		NA
1295583	567982		PMT0870			FALSE	0.323	15.000	0.000	NA		NA
567982	1362733	PMT0870			pseudo	FALSE	0.388	38.000	0.000	NA		NA
1362733	1203990			pseudo		FALSE	0.342	63.000	0.000	NA		NA
1203990	567983		PMT0871		F21B7.35	FALSE	0.372	34.000	0.000	NA		NA
567983	567984	PMT0871	PMT0872	F21B7.35		FALSE	0.037	165.000	0.000	1.000		NA
567986	567987	PMT0874	PMT0875		cysD	TRUE	0.776	44.000	0.149	NA		NA
567987	567988	PMT0875	PMT0876	cysD	metA	TRUE	0.893	15.000	0.048	1.000	Y	NA
1203991	1203992					FALSE	0.008	297.000	0.000	NA		NA
1203993	567991		PMT0879			FALSE	0.016	-112.000	0.000	NA		NA
567991	1203994	PMT0879				TRUE	0.729	0.000	0.000	NA		NA
1203994	567992		PMT0880			FALSE	0.110	-33.000	0.000	NA		NA
567992	1362734	PMT0880			pseudo	FALSE	0.362	60.000	0.000	NA		NA
1362734	567993		PMT0881	pseudo		FALSE	0.063	122.000	0.000	NA		NA
567994	567995	PMT0882	PMT0883			FALSE	0.004	473.000	0.000	NA		NA
567995	567996	PMT0883	PMT0884			FALSE	0.016	203.000	0.000	NA		NA
1295635	567997		PMT0885			FALSE	0.042	136.000	0.000	NA		NA
1203996	567998		PMT0886			FALSE	0.702	-3.000	0.000	NA		NA
567999	1295800	PMT0887				FALSE	0.189	82.000	0.000	NA		NA
1203768	568000		PMT0888			FALSE	0.036	144.000	0.000	NA		NA
568000	1362735	PMT0888			pseudo	FALSE	0.032	149.000	0.000	NA		NA
1362735	568001		PMT0889	pseudo		FALSE	0.630	2.000	0.000	NA		NA
568001	568002	PMT0889	PMT0890			FALSE	0.285	-13.000	0.000	NA		NA
1204000	568003		PMT0891			FALSE	0.012	227.000	0.000	NA		NA
568003	568004	PMT0891	PMT0892			FALSE	0.044	135.000	0.000	NA		NA
568005	568006	PMT0893	PMT0894	glnQ		TRUE	0.988	-3.000	0.382	1.000	Y	NA
568007	568008	PMT0895	PMT0896			FALSE	0.702	30.000	0.102	NA		NA
568008	568009	PMT0896	PMT0897			TRUE	0.961	9.000	0.424	0.025	Y	NA
568010	568011	PMT0898	PMT0899			FALSE	0.010	324.000	0.000	1.000		NA
568011	568012	PMT0899	PMT0900			TRUE	0.937	33.000	0.800	1.000	N	NA
1204002	568013		PMT0901			FALSE	0.340	25.000	0.000	NA		NA
568013	1204003	PMT0901				FALSE	0.033	147.000	0.000	NA		NA
1204003	568014		PMT0902			FALSE	0.074	115.000	0.000	NA		NA
568017	1204005	PMT0905				FALSE	0.375	-9.000	0.000	NA		NA
1204005	1204007					FALSE	0.005	374.000	0.000	NA		NA
1295621	1203769					FALSE	0.164	88.000	0.000	NA		NA
1203769	1295677					FALSE	0.380	57.000	0.000	NA		NA
1295677	568019		PMT0907			FALSE	0.181	83.000	0.000	NA		NA
568020	568021	PMT0908	PMT0909	hflC		FALSE	0.015	648.000	0.000	0.059	N	NA
568021	1362737	PMT0909			pseudo	FALSE	0.033	147.000	0.000	NA		NA
1362737	1295678			pseudo		FALSE	0.106	103.000	0.000	NA		NA
1208233	1295633					FALSE	0.273	73.000	0.000	NA		NA
1295633	568022		PMT0910			FALSE	0.090	-37.000	0.000	NA		NA
568022	1295462	PMT0910				FALSE	0.419	-7.000	0.000	NA		NA
1295462	568023		PMT0911			FALSE	0.348	11.000	0.000	NA		NA
568023	1362738	PMT0911			pseudo	FALSE	0.100	104.000	0.000	NA		NA
1362738	1204009			pseudo		FALSE	0.449	5.000	0.000	NA		NA
1295798	1204010					FALSE	0.333	24.000	0.000	NA		NA
1204010	568024		PMT0912			FALSE	0.702	-3.000	0.000	NA		NA
568027	568028	PMT0915	PMT0916			TRUE	0.886	4.000	0.250	NA		NA
568028	1362739	PMT0916			pseudo	FALSE	0.007	311.000	0.000	NA		NA
1362739	568029		PMT0917	pseudo		FALSE	0.009	278.000	0.000	NA		NA
568029	1295490	PMT0917				FALSE	0.004	459.000	0.000	NA		NA
1295490	1295535					FALSE	0.307	68.000	0.000	NA		NA
568030	1204011	PMT0918				FALSE	0.404	50.000	0.000	NA		NA
1204012	568031		RNA_12		tRNA-Pro1	FALSE	0.327	14.000	0.000	NA		NA
568031	568032	RNA_12	PMT0919	tRNA-Pro1		FALSE	0.012	229.000	0.000	NA		NA
568032	568033	PMT0919	PMT0920			TRUE	0.729	0.000	0.000	NA		NA
568033	568034	PMT0920	PMT0921			FALSE	0.702	-3.000	0.000	NA		NA
568035	1203771	PMT0922				FALSE	0.389	40.000	0.000	NA		NA
1203771	1204013					FALSE	0.016	203.000	0.000	NA		NA
1204013	568036		PMT0923			FALSE	0.015	206.000	0.000	NA		NA
568036	1295803	PMT0923				FALSE	0.003	632.000	0.000	NA		NA
1295803	568037		PMT0924			FALSE	0.009	280.000	0.000	NA		NA
568037	568038	PMT0924	PMT0925			FALSE	0.026	162.000	0.000	NA		NA
568038	1295786	PMT0925				FALSE	0.100	104.000	0.000	NA		NA
568039	568040	PMT0926	PMT0927			FALSE	0.262	176.000	0.667	NA		NA
568040	1203772	PMT0927				FALSE	0.266	74.000	0.000	NA		NA
1204017	568041		PMT0928			FALSE	0.015	206.000	0.000	NA		NA
568041	1295718	PMT0928				FALSE	0.003	632.000	0.000	NA		NA
1295718	568042		PMT0929			FALSE	0.004	604.000	0.000	NA		NA
1203773	1204019					TRUE	0.729	0.000	0.000	NA		NA
1204020	568043		PMT0930			FALSE	0.028	155.000	0.000	NA		NA
568044	568045	PMT0931	PMT0932			FALSE	0.320	21.000	0.000	NA		NA
568046	1204022	PMT0933				FALSE	0.040	138.000	0.000	NA		NA
1204022	1204023					FALSE	0.020	185.000	0.000	NA		NA
568047	1203774	PMT0934				FALSE	0.296	70.000	0.000	NA		NA
568049	568050	PMT0936	PMT0937			FALSE	0.313	67.000	0.000	NA		NA
568051	568052	PMT0938	PMT0939			FALSE	0.004	537.000	0.000	NA		NA
568052	568053	PMT0939	PMT0940			FALSE	0.376	35.000	0.000	NA		NA
568053	1203775	PMT0940				FALSE	0.010	-245.000	0.000	NA		NA
568055	568056	PMT0942	PMT0943			FALSE	0.005	387.000	0.000	NA		NA
568059	1204026	PMT0946				FALSE	0.014	207.000	0.000	NA		NA
1204026	1203777					FALSE	0.345	28.000	0.000	NA		NA
568061	1295674	PMT0948				FALSE	0.067	120.000	0.000	NA		NA
1295743	1295855					FALSE	0.327	14.000	0.000	NA		NA
1208234	568062		PMT0949			FALSE	0.038	140.000	0.000	NA		NA
568062	568063	PMT0949	PMT0950			FALSE	0.013	215.000	0.000	NA		NA
568063	568064	PMT0950	PMT0951			FALSE	0.352	62.000	0.000	NA		NA
1203778	568065		PMT0952			FALSE	0.017	201.000	0.000	NA		NA
568065	1204030	PMT0952				FALSE	0.353	30.000	0.000	NA		NA
1204030	568066		PMT0953			FALSE	0.212	79.000	0.000	NA		NA
1203779	568069		PMT0956			FALSE	0.005	371.000	0.000	NA		NA
568070	568071	PMT0957	PMT0958			FALSE	0.021	181.000	0.000	NA		NA
1203780	568072		PMT0959			FALSE	0.005	371.000	0.000	NA		NA
568073	1295630	PMT0960				FALSE	0.021	181.000	0.000	NA		NA
1295630	568074		PMT0961			FALSE	0.348	11.000	0.000	NA		NA
1203781	568075		PMT0962			FALSE	0.005	371.000	0.000	NA		NA
1203782	568077		PMT0964			FALSE	0.345	28.000	0.000	NA		NA
568077	1204032	PMT0964				FALSE	0.007	330.000	0.000	NA		NA
568078	568079	PMT0965	PMT0966			TRUE	0.941	0.000	0.182	NA		NA
568079	568080	PMT0966	PMT0967			TRUE	0.929	6.000	0.889	NA		NA
568080	568081	PMT0967	PMT0968			FALSE	0.116	101.000	0.000	NA		NA
568081	568082	PMT0968	PMT0969			FALSE	0.014	212.000	0.000	NA		NA
568082	1204033	PMT0969				FALSE	0.063	122.000	0.000	NA		NA
1204033	568083		PMT0970			FALSE	0.630	2.000	0.000	NA		NA
1295518	568084		PMT0971			FALSE	0.018	-105.000	0.000	NA		NA
568084	1295525	PMT0971				FALSE	0.072	118.000	0.000	NA		NA
1295525	568085		PMT0972			FALSE	0.019	187.000	0.000	NA		NA
568085	1362740	PMT0972			pseudo	FALSE	0.012	225.000	0.000	NA		NA
1362740	568086		PMT0973	pseudo		FALSE	0.007	307.000	0.000	NA		NA
568087	568088	PMT0974	PMT0975			FALSE	0.065	121.000	0.000	NA		NA
568090	568091	PMT0977	PMT0978			TRUE	0.992	-3.000	0.667	0.008	Y	NA
568091	568092	PMT0978	PMT0979			TRUE	0.973	-3.000	0.667	NA		NA
568092	568093	PMT0979	PMT0980			FALSE	0.618	102.000	0.500	NA		NA
568093	568094	PMT0980	PMT0981			FALSE	0.005	371.000	0.000	NA		NA
1204037	568095		PMT0982			FALSE	0.050	-52.000	0.000	NA		NA
1204038	1204039					FALSE	0.337	-10.000	0.000	NA		NA
1204040	1203784					FALSE	0.348	29.000	0.000	NA		NA
568097	1295522	PMT0984				FALSE	0.039	-67.000	0.000	NA		NA
568098	1295789	PMT0985				FALSE	0.009	280.000	0.000	NA		NA
1295477	568099		PMT0986			FALSE	0.326	65.000	0.000	NA		NA
568100	1204044	PMT0987				FALSE	0.320	21.000	0.000	NA		NA
568101	1204045	PMT0988				FALSE	0.018	194.000	0.000	NA		NA
1295457	568102		PMT0989			FALSE	0.028	-85.000	0.000	NA		NA
1204047	568103		PMT0990		hli5	FALSE	0.285	-13.000	0.000	NA		NA
568103	568104	PMT0990	PMT0991	hli5		FALSE	0.004	531.000	0.000	NA		NA
568105	1208235	PMT0992		hli7		FALSE	0.017	196.000	0.000	NA		NA
1208235	568106		PMT0993			FALSE	0.022	180.000	0.000	NA		NA
568106	568107	PMT0993	PMT0994		phoB	TRUE	0.895	-3.000	0.000	1.000	N	NA
568107	568108	PMT0994	PMT0995	phoB		FALSE	0.027	156.000	0.000	NA		NA
568108	568109	PMT0995	PMT0996			FALSE	0.373	58.000	0.000	NA		NA
568109	568110	PMT0996	PMT0997			FALSE	0.307	68.000	0.000	NA		NA
568112	568113	PMT0999	PMT1000		gap3	TRUE	0.970	1.000	0.689	NA		NA
568115	568116	PMT1002	PMT1003			FALSE	0.050	131.000	0.000	NA		NA
1362743	568117		PMT1004	pseudo		FALSE	0.281	72.000	0.000	NA		NA
1204051	1295671					FALSE	0.328	23.000	0.000	NA		NA
1295671	1204052					FALSE	0.006	332.000	0.000	NA		NA
1295826	568122		PMT1009			FALSE	0.702	-3.000	0.000	NA		NA
568123	568124	PMT1010	PMT1011		tig	FALSE	0.008	301.000	0.000	NA		NA
568125	568126	PMT1012	PMT1013			FALSE	0.014	207.000	0.000	NA		NA
568127	1204055	PMT1014				FALSE	0.100	104.000	0.000	NA		NA
1204055	568128		PMT1015			FALSE	0.007	319.000	0.000	NA		NA
568128	568129	PMT1015	PMT1016			FALSE	0.003	672.000	0.000	NA		NA
1295707	568130		PMT1017			FALSE	0.100	104.000	0.000	NA		NA
1295862	568131		PMT1018			FALSE	0.344	26.000	0.000	NA		NA
1295456	1295687					FALSE	0.419	-7.000	0.000	NA		NA
1295687	1204057					FALSE	0.008	288.000	0.000	NA		NA
1204057	1204058					FALSE	0.045	134.000	0.000	NA		NA
1204058	1295656					FALSE	0.318	20.000	0.000	NA		NA
1204059	568132		PMT1019			FALSE	0.037	142.000	0.000	NA		NA
568132	1204060	PMT1019				FALSE	0.367	9.000	0.000	NA		NA
1295679	1204061					FALSE	0.054	-51.000	0.000	NA		NA
568134	1295588	PMT1021				FALSE	0.388	55.000	0.000	NA		NA
1295588	1295591					FALSE	0.004	479.000	0.000	NA		NA
568135	1204063	PMT1022		rps21		FALSE	0.402	52.000	0.000	NA		NA
1204063	1295475					FALSE	0.630	2.000	0.000	NA		NA
1295475	1204065					FALSE	0.003	786.000	0.000	NA		NA
1204065	1295594					FALSE	0.006	351.000	0.000	NA		NA
568137	1362744	PMT1024			pseudo	FALSE	0.316	18.000	0.000	NA		NA
568138	1295529	PMT1025				FALSE	0.702	-3.000	0.000	NA		NA
1295529	568139		PMT1026		mutT	FALSE	0.010	248.000	0.000	NA		NA
568139	568140	PMT1026	PMT1027	mutT		FALSE	0.014	207.000	0.000	NA		NA
568140	1295607	PMT1027				FALSE	0.011	236.000	0.000	NA		NA
1295712	1204067					FALSE	0.003	1539.000	0.000	NA		NA
1362745	1203785			pseudo		FALSE	0.630	2.000	0.000	NA		NA
1203785	1362746				pseudo	FALSE	0.041	137.000	0.000	NA		NA
1362746	1204069			pseudo		FALSE	0.131	96.000	0.000	NA		NA
568143	1295538	PMT1030				FALSE	0.022	178.000	0.000	NA		NA
1295538	568144		PMT1031		clcD	FALSE	0.007	320.000	0.000	NA		NA
568144	568145	PMT1031	PMT1032	clcD		FALSE	0.244	76.000	0.000	NA		NA
1295655	1295610					FALSE	0.230	77.000	0.000	NA		NA
1204074	568149		PMT1036			FALSE	0.054	-51.000	0.000	NA		NA
568149	568150	PMT1036	PMT1037			FALSE	0.668	1.000	0.000	NA		NA
1204075	568151		PMT1038			FALSE	0.059	-49.000	0.000	NA		NA
568151	1204076	PMT1038				FALSE	0.008	284.000	0.000	NA		NA
1204076	1204077					FALSE	0.702	-3.000	0.000	NA		NA
568153	568154	PMT1040	PMT1041			FALSE	0.380	36.000	0.000	NA		NA
1295668	568158		PMT1045			FALSE	0.004	495.000	0.000	NA		NA
1204078	1204079					FALSE	0.150	92.000	0.000	NA		NA
1204079	1362748				pseudo	FALSE	0.012	228.000	0.000	NA		NA
568160	1362749	PMT1047			pseudo	FALSE	0.004	453.000	0.000	NA		NA
1203786	568161		RNA_38		tRNA-Lys1	FALSE	0.018	193.000	0.000	NA		NA
568162	568163	PMT1048	PMT1049	psbY	gidA	FALSE	0.325	76.000	0.000	1.000		NA
568163	568164	PMT1049	PMT1050	gidA	gidA	FALSE	0.657	36.000	0.013	0.008		NA
568164	568165	PMT1050	PMT1051	gidA	crtH	FALSE	0.137	133.000	0.031	1.000		NA
568165	568166	PMT1051	PMT1052	crtH	pepN	FALSE	0.079	174.000	0.000	1.000	N	NA
568169	568170	PMT1055	PMT1056		BioB	TRUE	0.849	-3.000	0.024	NA		NA
568170	568171	PMT1056	PMT1057	BioB	uppS	TRUE	0.712	21.000	0.021	1.000	N	NA
568171	568172	PMT1057	PMT1058	uppS		TRUE	0.874	-3.000	0.043	NA		NA
568172	568173	PMT1058	PMT1059		lysA	FALSE	0.590	24.000	0.040	NA		NA
568174	568175	PMT1060	PMT1061		clpC	FALSE	0.072	176.000	0.032	1.000		NA
568175	568176	PMT1061	PMT1062	clpC	gldA	TRUE	0.845	17.000	0.237	1.000	N	NA
568176	568177	PMT1062	PMT1063	gldA	todF	TRUE	0.798	15.000	0.250	1.000		NA
568177	568178	PMT1063	PMT1064	todF		TRUE	0.932	3.000	0.371	NA		NA
568179	568180	PMT1065	PMT1066	cdsA	cad	FALSE	0.696	20.000	0.019	1.000	N	NA
1204084	568181		PMT1067			FALSE	0.012	-127.000	0.000	NA		NA
568188	568189	PMT1074	PMT1075	kprS	F2J10.13	FALSE	0.003	863.000	0.000	NA		NA
568190	568191	PMT1076	PMT1077	LipA	recR	TRUE	0.809	5.000	0.021	1.000	N	NA
568193	568194	PMT1079	PMT1080			FALSE	0.017	366.000	0.000	NA	N	NA
568195	568196	PMT1081	PMT1082	rbpD		FALSE	0.004	447.000	0.000	NA		NA
568196	568197	PMT1082	PMT1083		srmB	FALSE	0.563	-10.000	0.026	NA		NA
568197	568198	PMT1083	PMT1084	srmB		TRUE	0.776	52.000	0.021	1.000	N	NA
568198	568199	PMT1084	PMT1085		recD	FALSE	0.621	14.000	0.034	1.000		NA
568199	568200	PMT1085	PMT1086	recD	recB	TRUE	0.942	-3.000	0.120	0.002		NA
568200	568201	PMT1086	PMT1087	recB		FALSE	0.017	412.000	0.000	1.000	N	NA
568201	568202	PMT1087	PMT1088		STE14	FALSE	0.018	349.000	0.000	NA	N	NA
568202	568203	PMT1088	PMT1089	STE14	recC	TRUE	0.756	34.000	0.034	NA	N	NA
568203	568204	PMT1089	PMT1090	recC		TRUE	0.727	-6.000	0.025	1.000		NA
568206	568207	PMT1092	PMT1093			TRUE	0.873	27.000	0.459	1.000		NA
568207	568208	PMT1093	PMT1094			TRUE	0.718	57.000	0.092	NA		NA
568208	568209	PMT1094	PMT1095			TRUE	0.834	23.000	0.220	NA	N	NA
568209	1295526	PMT1095				FALSE	0.388	38.000	0.000	NA		NA
1295526	1208237					FALSE	0.373	58.000	0.000	NA		NA
1295823	1204090					FALSE	0.201	-19.000	0.000	NA		NA
1295454	568213		PMT1099			FALSE	0.372	34.000	0.000	NA		NA
568213	568214	PMT1099	RNA_13		tRNA-Glu1	FALSE	0.173	85.000	0.000	NA		NA
568216	568217	PMT1101	PMT1102	petH	zwf	FALSE	0.115	172.000	0.117	1.000		NA
568217	568218	PMT1102	PMT1103	zwf		TRUE	0.965	42.000	0.583	NA	Y	NA
568218	568219	PMT1103	PMT1104		cbiA	TRUE	0.851	42.000	0.167	NA	N	NA
568219	568220	PMT1104	PMT1105	cbiA		FALSE	0.602	70.000	0.000	1.000	N	NA
568220	568221	PMT1105	PMT1106			FALSE	0.591	80.000	0.167	NA		NA
568222	568223	PMT1107	PMT1108			TRUE	0.897	-3.000	0.069	NA		NA
568223	568224	PMT1108	PMT1109		crtE	TRUE	0.940	-3.000	0.214	NA		NA
568224	568225	PMT1109	PMT1110	crtE	folD	TRUE	0.936	25.000	0.250	1.000	Y	NA
568227	568228	PMT1112	PMT1113	rluA		TRUE	0.795	69.000	0.333	NA		NA
1204093	568229		PMT1114			FALSE	0.353	30.000	0.000	NA		NA
568229	1295685	PMT1114				FALSE	0.048	132.000	0.000	NA		NA
568235	568236	PMT1120	PMT1121		leuA	TRUE	0.835	4.000	0.018	1.000	N	NA
568238	568239	PMT1123	PMT1124	crtL1	gyrA	TRUE	0.720	30.000	0.017	1.000	N	NA
568240	568241	PMT1125	PMT1126		guaB	FALSE	0.536	77.000	0.076	NA		NA
568241	568242	PMT1126	PMT1127	guaB	trxA	FALSE	0.041	225.000	0.038	1.000		NA
568242	568243	PMT1127	PMT1128	trxA	hisH	FALSE	0.402	95.000	0.069	1.000		NA
568243	568244	PMT1128	PMT1129	hisH		TRUE	0.924	-3.000	0.021	1.000	N	NA
568246	568247	PMT1131	PMT1132	cytM	lasT	TRUE	0.893	-3.000	0.041	1.000		NA
568247	568248	PMT1132	PMT1133	lasT	penP	TRUE	0.779	31.000	0.046	1.000	N	NA
568248	568249	PMT1133	PMT1134	penP		TRUE	0.961	-3.000	0.393	NA		NA
568249	568250	PMT1134	PMT1135		chlI	TRUE	0.914	-3.000	0.111	NA		NA
568250	568251	PMT1135	PMT1136	chlI	ruvC	TRUE	0.821	5.000	0.026	1.000	N	NA
568251	568252	PMT1136	PMT1137	ruvC		FALSE	0.676	9.000	0.000	1.000	N	NA
568252	568253	PMT1137	PMT1138			TRUE	0.895	-3.000	0.000	1.000	N	NA
568253	568254	PMT1138	PMT1139			FALSE	0.032	148.000	0.000	NA		NA
568254	568255	PMT1139	PMT1140			FALSE	0.393	43.000	0.000	NA		NA
568255	1362751	PMT1140			pseudo	FALSE	0.318	20.000	0.000	NA		NA
1362751	568256		PMT1141	pseudo		FALSE	0.012	228.000	0.000	NA		NA
568256	568257	PMT1141	PMT1142			FALSE	0.513	10.000	0.018	NA		NA
568257	568258	PMT1142	PMT1143		thrA	TRUE	0.790	38.000	0.180	NA		NA
568258	568259	PMT1143	PMT1144	thrA		FALSE	0.452	102.000	0.214	NA		NA
568259	568260	PMT1144	PMT1145		ddpA	TRUE	0.802	58.000	0.225	NA		NA
568260	568261	PMT1145	PMT1146	ddpA	dppB	TRUE	0.989	0.000	0.267	0.022	Y	NA
1208239	568263		PMT1148			FALSE	0.012	232.000	0.000	NA		NA
568263	568264	PMT1148	PMT1149			FALSE	0.010	244.000	0.000	NA		NA
568264	568265	PMT1149	PMT1150		som	FALSE	0.003	728.000	0.000	NA		NA
568265	1203787	PMT1150		som		FALSE	0.009	-569.000	0.000	NA		NA
568266	1295571	PMT1151				FALSE	0.264	-15.000	0.000	NA		NA
1295571	568267		PMT1152		hli9	FALSE	0.003	749.000	0.000	NA		NA
568267	568268	PMT1152	PMT1153	hli9	hli6	FALSE	0.065	156.000	0.000	0.002		NA
568268	568269	PMT1153	PMT1154	hli6	hli8	FALSE	0.341	12.000	0.000	NA		NA
568271	568272	PMT1156	PMT1157	acrA	polA	TRUE	0.709	25.000	0.017	1.000	N	NA
568272	568273	PMT1157	PMT1158	polA		FALSE	0.015	398.000	0.000	NA	N	NA
568273	568274	PMT1158	PMT1159		cysRS	FALSE	0.643	35.000	0.000	NA	N	NA
568276	568277	PMT1161	PMT1162	dxr		TRUE	0.903	-3.000	0.016	NA	N	NA
568278	568279	PMT1163	PMT1164		pntB	FALSE	0.702	-19.000	0.354	NA		NA
568279	568280	PMT1164	PMT1165	pntB	pntA-2	TRUE	0.940	0.000	0.072	0.001		NA
568280	568281	PMT1165	PMT1166	pntA-2	pntA-1	TRUE	0.984	0.000	0.829	0.001		NA
568283	1203788	PMT1168				FALSE	0.383	95.000	0.083	NA		NA
568286	568287	PMT1171	PMT1172			FALSE	0.603	83.000	0.229	NA		NA
568287	568288	PMT1172	PMT1173		ycf39	TRUE	0.771	76.000	0.392	NA		NA
568288	1203789	PMT1173		ycf39		TRUE	0.879	56.000	0.392	1.000		NA
1203789	568289		PMT1174		F18O21.290	FALSE	0.666	29.000	0.050	1.000		NA
568290	568291	PMT1175	PMT1176		ilvN	TRUE	0.744	6.000	0.065	1.000		NA
568292	568293	PMT1177	PMT1178	ppiB		TRUE	0.909	4.000	0.317	1.000		NA
568293	1295752	PMT1178				FALSE	0.337	-10.000	0.000	NA		NA
568294	568295	PMT1179	PMT1180	psbD	psbC	TRUE	0.882	-16.000	0.878	0.002		NA
1295845	568296		PMT1181		maf	FALSE	0.313	67.000	0.000	NA		NA
568297	568298	PMT1182	PMT1183		cobB	FALSE	0.590	12.000	0.036	NA		NA
568298	568299	PMT1183	PMT1184	cobB		TRUE	0.880	-3.000	0.026	1.000		NA
568299	1295664	PMT1184				FALSE	0.240	-16.000	0.000	NA		NA
1295664	1295773					FALSE	0.668	1.000	0.000	NA		NA
1295773	568300		PMT1185			FALSE	0.008	291.000	0.000	NA		NA
568301	568302	PMT1186	PMT1187		dnaA	FALSE	0.538	76.000	0.000	1.000	N	NA
568303	568304	PMT1188	PMT1189			FALSE	0.679	7.000	0.057	NA		NA
568304	568305	PMT1189	PMT1190			TRUE	0.753	8.000	0.135	NA		NA
568306	568307	PMT1191	PMT1192			FALSE	0.499	101.000	0.222	1.000		NA
568307	568308	PMT1192	PMT1193		hisG	TRUE	0.933	0.000	0.021	1.000	N	NA
568312	568313	PMT1197	PMT1198	cbbX		FALSE	0.316	-16.000	0.008	NA		NA
568313	568314	PMT1198	PMT1199		csoS1	FALSE	0.051	144.000	0.008	NA		NA
568314	568315	PMT1199	PMT1200	csoS1		TRUE	0.812	57.000	0.235	NA		NA
568315	568316	PMT1200	PMT1201			TRUE	0.993	0.000	0.868	NA	Y	NA
568316	568317	PMT1201	PMT1202		csoS3	TRUE	0.971	2.000	0.925	NA		NA
568317	1204101	PMT1202		csoS3		FALSE	0.021	-97.000	0.000	NA		NA
1204101	568318		PMT1203		csoS2	FALSE	0.668	1.000	0.000	NA		NA
568318	568319	PMT1203	PMT1204	csoS2	rbcS	FALSE	0.511	112.000	0.474	NA		NA
568319	568320	PMT1204	PMT1205	rbcS	rbcL	FALSE	0.649	108.000	0.392	0.001	N	NA
568320	568321	PMT1205	PMT1206	rbcL	csoS1	TRUE	0.858	70.000	0.373	NA	N	NA
568324	1208240	PMT1209				FALSE	0.702	-3.000	0.000	NA		NA
1208240	568325		PMT1210		trpF	FALSE	0.022	-96.000	0.000	NA		NA
568325	1204103	PMT1210		trpF		FALSE	0.189	-22.000	0.000	NA		NA
568326	568327	PMT1211	PMT1212			FALSE	0.007	324.000	0.000	NA		NA
568327	568328	PMT1212	PMT1213		sbtA	TRUE	0.814	5.000	0.152	NA		NA
568328	568329	PMT1213	PMT1214	sbtA		FALSE	0.048	201.000	0.048	NA		NA
568330	568331	PMT1215	PMT1216	chlN	chlB	TRUE	0.970	8.000	0.591	0.001	Y	NA
568331	568332	PMT1216	PMT1217	chlB	frxC	FALSE	0.171	206.000	0.226	0.002	N	NA
568333	568334	PMT1218	PMT1219	pcr		FALSE	0.637	83.000	0.274	NA		NA
568334	568335	PMT1219	PMT1220		psaM	FALSE	0.261	148.000	0.395	NA		NA
568335	1204105	PMT1220		psaM		FALSE	0.404	51.000	0.000	NA		NA
1204105	568336		PMT1221			FALSE	0.385	56.000	0.000	NA		NA
1295466	568337		PMT1222			FALSE	0.668	1.000	0.000	NA		NA
568337	568338	PMT1222	PMT1223			FALSE	0.007	303.000	0.000	NA		NA
568338	1295784	PMT1223				FALSE	0.079	112.000	0.000	NA		NA
1295784	568339		PMT1224		lplA	FALSE	0.021	-97.000	0.000	NA		NA
1203790	568342		PMT1227		folE	FALSE	0.036	143.000	0.000	NA		NA
568342	568343	PMT1227	PMT1228	folE		TRUE	0.842	12.000	0.348	1.000		NA
568343	568344	PMT1228	PMT1229		accA	FALSE	0.633	25.000	0.033	1.000		NA
568344	568345	PMT1229	PMT1230	accA		FALSE	0.638	27.000	0.033	1.000		NA
568345	568346	PMT1230	PMT1231			FALSE	0.320	166.000	0.659	0.025		NA
568346	568347	PMT1231	PMT1232			TRUE	0.820	75.000	0.465	1.000		NA
568348	568349	PMT1233	PMT1234	rps1b		TRUE	0.969	-3.000	0.513	NA		NA
568349	568350	PMT1234	PMT1235			TRUE	0.833	-3.000	0.020	NA		NA
568351	568352	PMT1236	PMT1237			FALSE	0.266	74.000	0.000	NA		NA
568353	568354	PMT1238	PMT1239		ilvB	TRUE	0.909	0.000	0.050	1.000		NA
568356	568357	PMT1241	PMT1242			TRUE	0.962	-3.000	0.367	1.000		NA
568357	568358	PMT1242	PMT1243		cobO	TRUE	0.789	44.000	0.026	1.000	N	NA
568358	568359	PMT1243	PMT1244	cobO	pyrH	FALSE	0.030	312.000	0.010	1.000	N	NA
568359	568360	PMT1244	PMT1245	pyrH	frr	TRUE	0.937	51.000	0.626	1.000	N	NA
568360	568361	PMT1245	PMT1246	frr	fixC	TRUE	0.926	-3.000	0.022	1.000	N	NA
568362	1362753	PMT1247			pseudo	FALSE	0.328	23.000	0.000	NA		NA
1362753	568363		PMT1248	pseudo	tal	FALSE	0.256	75.000	0.000	NA		NA
568363	568364	PMT1248	PMT1249	tal	ftsI	FALSE	0.601	93.000	0.131	1.000	N	NA
568364	568365	PMT1249	PMT1250	ftsI		TRUE	0.729	0.000	0.000	NA		NA
568365	568366	PMT1250	PMT1251			FALSE	0.145	93.000	0.000	NA		NA
568367	568368	PMT1252	PMT1253	cobC		TRUE	0.795	5.000	0.017	1.000	N	NA
1204110	568370		PMT1255			FALSE	0.398	53.000	0.000	NA		NA
568371	568372	PMT1256	PMT1257	arsC	ppa	TRUE	0.794	57.000	0.045	1.000	N	NA
568374	568375	PMT1259	PMT1260	proS	psb27	FALSE	0.555	29.000	0.023	NA		NA
568375	568376	PMT1260	PMT1261	psb27	purA	FALSE	0.269	94.000	0.022	NA		NA
568376	568377	PMT1261	PMT1262	purA		TRUE	0.775	53.000	0.021	1.000	N	NA
568382	568383	PMT1267	PMT1268		argB	FALSE	0.508	-13.000	0.027	NA		NA
568383	568384	PMT1268	PMT1269	argB		FALSE	0.512	4.000	0.000	NA		NA
568384	568385	PMT1269	PMT1270			FALSE	0.167	-25.000	0.000	NA		NA
568386	1295493	PMT1271		priA		FALSE	0.010	248.000	0.000	NA		NA
568387	1204114	PMT1272		sigA		FALSE	0.006	367.000	0.000	NA		NA
1204114	568388		PMT1273		hemC	FALSE	0.014	-114.000	0.000	NA		NA
568389	568390	PMT1274	PMT1275		ppa	TRUE	0.716	50.000	0.070	NA		NA
568390	1204115	PMT1275		ppa		FALSE	0.035	-73.000	0.000	NA		NA
1204115	568391		PMT1276			FALSE	0.326	65.000	0.000	NA		NA
568393	568394	PMT1278	PMT1279		cxp	FALSE	0.100	104.000	0.000	NA		NA
568394	568395	PMT1279	PMT1280	cxp		FALSE	0.140	94.000	0.000	NA		NA
568396	568397	PMT1281	PMT1282			FALSE	0.419	-7.000	0.000	NA		NA
568397	568398	PMT1282	PMT1283			FALSE	0.013	274.000	0.000	1.000		NA
568398	568399	PMT1283	PMT1284			FALSE	0.334	91.000	0.035	NA		NA
568399	1295760	PMT1284				FALSE	0.281	72.000	0.000	NA		NA
1295760	568400		PMT1285			FALSE	0.177	84.000	0.000	NA		NA
568402	1295822	PMT1287		futB		FALSE	0.012	228.000	0.000	NA		NA
1295822	1204120					FALSE	0.256	75.000	0.000	NA		NA
1204121	568405		PMT1290			FALSE	0.082	110.000	0.000	NA		NA
568405	568406	PMT1290	PMT1291			TRUE	0.724	-6.000	0.047	NA		NA
568406	1204122	PMT1291				FALSE	0.702	-3.000	0.000	NA		NA
1204122	568407		PMT1292			FALSE	0.668	1.000	0.000	NA		NA
568412	568413	PMT1297	PMT1298			FALSE	0.303	69.000	0.000	NA		NA
568413	1204123	PMT1298				FALSE	0.011	-147.000	0.000	NA		NA
1204123	1362754				pseudo	FALSE	0.008	293.000	0.000	NA		NA
1362754	568414		PMT1299	pseudo		FALSE	0.005	419.000	0.000	NA		NA
568416	568417	PMT1301	PMT1302		pta	FALSE	0.588	26.000	0.032	NA		NA
568417	568418	PMT1302	PMT1303	pta		TRUE	0.711	33.000	0.097	NA		NA
1204124	568419		PMT1304			FALSE	0.018	-105.000	0.000	NA		NA
568420	1362755	PMT1305		map	pseudo	FALSE	0.019	187.000	0.000	NA		NA
568421	568422	PMT1306	RNA_14	rpl19	tRNA-Trp1	FALSE	0.333	64.000	0.000	NA		NA
568422	568423	RNA_14	PMT1307	tRNA-Trp1		FALSE	0.384	37.000	0.000	NA		NA
568424	568425	RNA_15	PMT1308	tRNA-Asp1	gltX	FALSE	0.345	28.000	0.000	NA		NA
568426	568427	PMT1309	PMT1310	nhaP		FALSE	0.619	-10.000	0.054	NA		NA
568427	568428	PMT1310	PMT1311			TRUE	0.911	0.000	0.073	NA		NA
568428	568429	PMT1311	PMT1312		nfrC	FALSE	0.114	-76.000	0.073	NA		NA
568431	568432	PMT1314	PMT1315	hli1	qri7	FALSE	0.522	38.000	0.015	NA		NA
568433	568434	PMT1316	PMT1317	psaF	psaJ	TRUE	0.909	46.000	0.455	0.013		NA
568435	1203792	PMT1318		gmk	gmk	FALSE	0.009	-608.000	0.000	NA		NA
568436	568437	PMT1319	PMT1320		tatC	FALSE	0.280	119.000	0.033	NA	N	NA
568439	568440	PMT1322	PMT1323	petC	petA	TRUE	0.937	54.000	0.881	0.037		NA
568440	568441	PMT1323	PMT1324	petA	yvoC, lgt, umpA	TRUE	0.866	21.000	0.476	1.000		NA
568441	568442	PMT1324	PMT1325	yvoC, lgt, umpA	cobM	TRUE	0.948	0.000	0.061	1.000	N	NA
568443	568444	RNA_16	PMT1326	tRNA-Val1		FALSE	0.036	143.000	0.000	NA		NA
568446	568447	PMT1328	PMT1329	ubiA		TRUE	0.867	4.000	0.043	1.000	N	NA
568447	1204128	PMT1329				FALSE	0.005	443.000	0.000	NA		NA
1295500	568448		PMT1330		ispD	FALSE	0.348	11.000	0.000	NA		NA
568449	568450	PMT1331	PMT1332			TRUE	0.951	-3.000	0.143	NA	N	NA
568450	568451	PMT1332	PMT1333		fabG	TRUE	0.867	48.000	0.156	1.000	N	NA
568453	568454	PMT1335	PMT1336			FALSE	0.578	3.000	0.000	NA		NA
568454	568455	PMT1336	PMT1337			FALSE	0.344	27.000	0.000	NA		NA
568455	568456	PMT1337	PMT1338		ccmA	FALSE	0.670	77.000	0.138	0.077		NA
568456	568457	PMT1338	PMT1339	ccmA	ctaB	FALSE	0.494	87.000	0.019	1.000	N	NA
568457	568458	PMT1339	PMT1340	ctaB	ctaA	TRUE	0.936	-7.000	0.090	1.000	Y	NA
568458	1204129	PMT1340		ctaA		FALSE	0.340	25.000	0.000	NA		NA
568459	568460	PMT1341	PMT1342	ctaC	ctaD	TRUE	0.991	-3.000	0.500	0.001	Y	NA
568460	568461	PMT1342	PMT1343	ctaD	ctaE	TRUE	0.991	-3.000	0.500	0.001	Y	NA
568461	568462	PMT1343	PMT1344	ctaE		TRUE	0.750	96.000	1.000	NA		NA
568463	568464	PMT1345	PMT1346		ribE	FALSE	0.200	93.000	0.009	NA		NA
568465	568466	PMT1347	PMT1348			TRUE	0.883	-3.000	0.054	NA		NA
568467	568468	PMT1349	PMT1350		cobT	TRUE	0.726	30.000	0.130	NA		NA
568468	568469	PMT1350	PMT1351	cobT		FALSE	0.488	92.000	0.155	NA		NA
568469	568470	PMT1351	PMT1352			TRUE	0.912	-3.000	0.105	NA		NA
568470	568471	PMT1352	PMT1353		topA	TRUE	0.848	0.000	0.020	NA		NA
568472	568473	PMT1354	PMT1355	ndhB	salX	TRUE	0.827	29.000	0.134	1.000	N	NA
568473	568474	PMT1355	PMT1356	salX		TRUE	0.952	-3.000	0.111	1.000	N	NA
568474	568475	PMT1356	PMT1357			TRUE	0.857	85.000	0.182	0.004	Y	NA
568477	568478	PMT1359	PMT1360	BirA		FALSE	0.363	-37.000	0.027	1.000	N	NA
568478	568479	PMT1360	PMT1361		pspA	FALSE	0.251	126.000	0.045	NA	N	NA
568481	568482	PMT1363	PMT1364			FALSE	0.250	119.000	0.000	0.049	N	NA
568483	568484	PMT1365	PMT1366	sppA	tyrA	TRUE	0.963	-3.000	0.207	1.000	N	NA
568484	568485	PMT1366	PMT1367	tyrA		FALSE	0.213	127.000	0.114	NA		NA
568485	568486	PMT1367	PMT1368		rpl34	FALSE	0.635	49.000	0.027	NA		NA
568486	568487	PMT1368	PMT1369	rpl34	rnpA	TRUE	0.912	61.000	0.787	1.000		NA
568487	568488	PMT1369	PMT1370	rnpA		TRUE	0.872	-3.000	0.041	NA		NA
568488	568489	PMT1370	PMT1371		yidC	FALSE	0.407	82.000	0.043	NA		NA
568489	568490	PMT1371	PMT1372	yidC		TRUE	0.799	-3.000	0.014	NA		NA
568490	568491	PMT1372	PMT1373			TRUE	0.799	-3.000	0.014	NA		NA
568491	568492	PMT1373	PMT1374		serRS	TRUE	0.733	63.000	0.011	0.077	N	NA
568492	568493	PMT1374	PMT1375	serRS		TRUE	0.718	20.000	0.024	1.000	N	NA
568493	1204131	PMT1375				FALSE	0.348	11.000	0.000	NA		NA
1204131	568494		PMT1376		rps14	FALSE	0.216	-18.000	0.000	NA		NA
568494	568495	PMT1376	PMT1377	rps14	pnp	FALSE	0.221	188.000	0.019	1.000	Y	NA
568497	568498	PMT1379	PMT1380			FALSE	0.526	45.000	0.013	NA		NA
568502	1203794	PMT1383				FALSE	0.007	312.000	0.000	NA		NA
1203794	1295721					FALSE	0.363	32.000	0.000	NA		NA
568504	568505	PMT1385	PMT1386			FALSE	0.380	8.000	0.000	NA		NA
568506	1295737	PMT1387				FALSE	0.016	202.000	0.000	NA		NA
1295737	1204135					FALSE	0.005	379.000	0.000	NA		NA
1204135	568507		PMT1388			FALSE	0.057	126.000	0.000	NA		NA
568507	1204136	PMT1388				FALSE	0.404	50.000	0.000	NA		NA
568508	568509	PMT1389	PMT1390			FALSE	0.085	109.000	0.000	NA		NA
1295556	1203795					FALSE	0.398	53.000	0.000	NA		NA
1203795	1204138					FALSE	0.005	429.000	0.000	NA		NA
1204138	568510		PMT1391			FALSE	0.668	1.000	0.000	NA		NA
568510	1203796	PMT1391				FALSE	0.029	153.000	0.000	NA		NA
1203796	1204139					FALSE	0.333	13.000	0.000	NA		NA
568512	1295511	PMT1393				FALSE	0.324	22.000	0.000	NA		NA
1295511	1204140					FALSE	0.028	-85.000	0.000	NA		NA
1204140	1203797					FALSE	0.015	204.000	0.000	NA		NA
1203797	568513		PMT1394			FALSE	0.259	91.000	0.006	1.000		NA
568513	568514	PMT1394	PMT1395		himA	FALSE	0.390	89.000	0.033	1.000		NA
568514	568515	PMT1395	PMT1396	himA		FALSE	0.224	160.000	0.400	NA		NA
568518	568519	PMT1398	PMT1399	melB		TRUE	0.983	-3.000	0.833	NA	N	NA
1204143	568520		PMT1400			FALSE	0.419	-7.000	0.000	NA		NA
568520	568521	PMT1400	PMT1401			TRUE	0.864	42.000	0.369	NA		NA
568522	568523	PMT1402	PMT1403	pyrF	tyrS	TRUE	0.741	24.000	0.027	1.000	N	NA
568523	568524	PMT1403	PMT1404	tyrS		FALSE	0.455	81.000	0.034	1.000		NA
568525	568526	PMT1405	PMT1406			FALSE	0.067	120.000	0.000	NA		NA
568526	568527	PMT1406	PMT1407		pepB	TRUE	0.788	39.000	0.176	NA		NA
1204144	1203798					FALSE	0.358	31.000	0.000	NA		NA
1203798	568528		PMT1408			FALSE	0.274	113.000	0.114	NA		NA
568528	568529	PMT1408	PMT1409		lpxB	TRUE	0.934	-3.000	0.034	1.000	N	NA
568529	568530	PMT1409	PMT1410	lpxB	lpxA	TRUE	0.980	0.000	0.062	1.000	Y	NA
568530	568531	PMT1410	PMT1411	lpxA	fabZ	TRUE	0.835	6.000	0.071	1.000	N	NA
568531	568532	PMT1411	PMT1412	fabZ	lpxC	TRUE	0.792	24.000	0.083	1.000	N	NA
568532	568533	PMT1412	PMT1413	lpxC		TRUE	0.980	0.000	0.052	1.000	Y	NA
568533	568534	PMT1413	PMT1414		purC	TRUE	0.739	70.000	0.058	1.000	N	NA
568534	568535	PMT1414	PMT1415	purC		TRUE	0.835	-3.000	0.021	NA		NA
568536	568537	PMT1416	PMT1417	purD	nblS	TRUE	0.772	25.000	0.025	0.075	N	NA
568538	568539	PMT1418	PMT1419	kaiC	kaiB	TRUE	0.906	67.000	0.927	1.000		NA
1208245	568540		PMT1420		rpl21	FALSE	0.011	239.000	0.000	NA		NA
568540	568541	PMT1420	PMT1421	rpl21	rpl27	TRUE	0.973	43.000	0.667	0.017	Y	NA
568541	568542	PMT1421	PMT1422	rpl27	truB	TRUE	0.860	64.000	0.000	1.000	Y	NA
568542	568543	PMT1422	PMT1423	truB		FALSE	0.455	72.000	0.012	1.000		NA
568544	568545	PMT1424	PMT1425		spoIID	TRUE	0.977	1.000	0.550	1.000	N	NA
568545	1204145	PMT1425		spoIID		FALSE	0.101	-36.000	0.000	NA		NA
1204146	1204147					FALSE	0.142	-28.000	0.000	NA		NA
1204147	1295753					FALSE	0.046	-55.000	0.000	NA		NA
1295753	1362756				pseudo	FALSE	0.004	469.000	0.000	NA		NA
1362756	568548		PMT1428	pseudo		FALSE	0.316	17.000	0.000	NA		NA
568548	568549	PMT1428	PMT1429		petF	TRUE	0.968	-3.000	0.500	NA		NA
568549	568550	PMT1429	PMT1430	petF	prmA	FALSE	0.129	165.000	0.027	1.000	N	NA
568550	568551	PMT1430	PMT1431	prmA	serA	TRUE	0.758	15.000	0.053	1.000	N	NA
568552	568553	PMT1432	PMT1433			TRUE	0.964	-3.000	0.442	NA		NA
568553	568554	PMT1433	RNA_18		tRNA-Val2	FALSE	0.212	79.000	0.000	NA		NA
568554	568555	RNA_18	PMT1434	tRNA-Val2	murD	FALSE	0.345	28.000	0.000	NA		NA
568556	568557	PMT1435	PMT1436			FALSE	0.013	215.000	0.000	NA		NA
568557	1204149	PMT1436				FALSE	0.019	187.000	0.000	NA		NA
1204149	568558		PMT1437			FALSE	0.702	-3.000	0.000	NA		NA
568558	568559	PMT1437	PMT1438			FALSE	0.625	66.000	0.065	NA		NA
568563	568564	PMT1442	PMT1443	rpoZ		FALSE	0.530	49.000	0.013	NA		NA
568567	568568	PMT1446	PMT1447	pgmI	secG	FALSE	0.678	58.000	0.041	1.000		NA
568568	1204152	PMT1447		secG		FALSE	0.003	740.000	0.000	NA		NA
1204152	568569		PMT1448			FALSE	0.119	100.000	0.000	NA		NA
568570	568571	PMT1449	PMT1450	groEL	groES	TRUE	0.939	82.000	0.905	0.009	Y	NA
568572	568573	PMT1451	PMT1452	atpB	atpE	TRUE	0.929	85.000	0.837	0.004	Y	NA
568573	568574	PMT1452	PMT1453	atpE	mipB	TRUE	0.708	34.000	0.002	1.000	N	NA
568575	1295478	PMT1454				FALSE	0.367	33.000	0.000	NA		NA
568576	1203799	PMT1455		hisB		FALSE	0.333	64.000	0.000	NA		NA
1203799	1204154					FALSE	0.011	238.000	0.000	NA		NA
1295582	1203800					FALSE	0.352	62.000	0.000	NA		NA
1203800	568577		PMT1456		pepP	FALSE	0.050	131.000	0.000	NA		NA
568578	568579	PMT1457	PMT1458			FALSE	0.702	-3.000	0.000	NA		NA
568579	568580	PMT1458	PMT1459			TRUE	0.914	0.000	0.083	NA		NA
568580	568581	PMT1459	PMT1460		nadD	TRUE	0.834	-3.000	0.011	1.000		NA
568581	568582	PMT1460	PMT1461	nadD	nadE	FALSE	0.474	-51.000	0.023	1.000	Y	NA
568582	568583	PMT1461	PMT1462	nadE	ald	TRUE	0.758	63.000	0.036	1.000	N	NA
568584	568585	PMT1463	PMT1464			TRUE	0.705	13.000	0.125	NA		NA
568587	568588	PMT1466	PMT1467	atpC	atpA	TRUE	0.973	31.000	0.846	0.004	Y	NA
568588	568589	PMT1467	PMT1468	atpA	atpH	TRUE	0.977	52.000	0.864	0.004	Y	NA
568589	568590	PMT1468	PMT1469	atpH	atpF	TRUE	0.986	0.000	0.132	0.004	Y	NA
568590	568591	PMT1469	PMT1470	atpF	atpG	TRUE	0.992	-3.000	0.569	0.004	Y	NA
568591	568592	PMT1470	PMT1471	atpG		FALSE	0.589	145.000	0.368	0.004	Y	NA
568592	568593	PMT1471	PMT1472		atpI	TRUE	0.975	48.000	0.679	0.004	Y	NA
568593	1204156	PMT1472		atpI		TRUE	0.729	0.000	0.000	NA		NA
1204156	568594		PMT1473			FALSE	0.337	-10.000	0.000	NA		NA
568594	568595	PMT1473	PMT1474			TRUE	0.941	-3.000	0.184	1.000		NA
568595	1204157	PMT1474				FALSE	0.326	65.000	0.000	NA		NA
568596	568597	PMT1475	PMT1476	ftsW	ccdA	TRUE	0.880	46.000	0.202	1.000	N	NA
568597	568598	PMT1476	PMT1477	ccdA	ycf44	TRUE	0.966	5.000	0.371	1.000	Y	NA
568599	1204159	PMT1478				FALSE	0.050	131.000	0.000	NA		NA
568600	568601	PMT1479	PMT1480			TRUE	0.873	49.000	0.375	NA		NA
568601	568602	PMT1480	PMT1481		glnB	TRUE	0.910	41.000	0.682	NA		NA
568605	568606	PMT1484	PMT1485	purB	fumC	FALSE	0.109	156.000	0.011	1.000	N	NA
568606	568607	PMT1485	PMT1486	fumC		FALSE	0.194	122.000	0.000	1.000	N	NA
568609	568610	PMT1488	PMT1489	bioF		FALSE	0.601	15.000	0.053	NA		NA
568610	568611	PMT1489	PMT1490			TRUE	0.707	-12.000	0.163	NA		NA
568611	568612	PMT1490	PMT1491		BioD	TRUE	0.862	-3.000	0.030	NA		NA
568612	1203801	PMT1491		BioD		TRUE	0.889	-3.000	0.061	NA		NA
568613	1295453	PMT1492				FALSE	0.030	152.000	0.000	NA		NA
568615	568616	PMT1494	PMT1495			FALSE	0.142	-28.000	0.000	NA		NA
568618	568619	PMT1497	PMT1498		fer	FALSE	0.490	7.000	0.000	1.000		NA
568619	568620	PMT1498	PMT1499	fer		FALSE	0.316	17.000	0.000	NA		NA
568620	568621	PMT1499	PMT1500			TRUE	0.982	0.000	1.000	NA		NA
568621	568622	PMT1500	PMT1501			FALSE	0.611	79.000	0.175	NA		NA
568622	1203802	PMT1501				TRUE	0.738	35.000	0.118	NA		NA
1203802	568623		PMT1502		putP	TRUE	0.807	55.000	0.213	NA		NA
568623	568624	PMT1502	PMT1503	putP		FALSE	0.577	43.000	0.011	1.000		NA
568624	568625	PMT1503	PMT1504		hli3	TRUE	0.870	-3.000	0.022	1.000		NA
568625	568626	PMT1504	PMT1505	hli3	rpoC2	TRUE	0.888	59.000	0.476	1.000		NA
568627	568628	PMT1506	PMT1507	rpoC1	rpoB	TRUE	0.978	50.000	0.851	0.002	Y	NA
568628	568629	PMT1507	PMT1508	rpoB	tatD	FALSE	0.030	284.000	0.012	NA	N	NA
568629	568630	PMT1508	PMT1509	tatD	rpsT	TRUE	0.779	48.000	0.034	NA	N	NA
568632	568633	PMT1511	PMT1512	rpiA	hhoA	TRUE	0.792	43.000	0.030	1.000	N	NA
568633	1204164	PMT1512		hhoA		FALSE	0.059	125.000	0.000	NA		NA
1204164	568634		PMT1513			FALSE	0.008	301.000	0.000	NA		NA
568634	568635	PMT1513	PMT1514			FALSE	0.389	40.000	0.000	NA		NA
568636	568637	PMT1515	PMT1516			FALSE	0.354	95.000	0.065	NA		NA
568637	568638	PMT1516	PMT1517			FALSE	0.030	151.000	0.000	NA		NA
568638	568639	PMT1517	PMT1518			FALSE	0.402	52.000	0.000	NA		NA
568639	568640	PMT1518	PMT1519			FALSE	0.065	121.000	0.000	NA		NA
568640	568641	PMT1519	PMT1520		aslB	TRUE	0.962	-3.000	0.400	NA		NA
568642	568643	PMT1521	PMT1522			TRUE	0.883	27.000	0.600	NA		NA
568643	568644	PMT1522	PMT1523			FALSE	0.004	446.000	0.000	NA		NA
568646	568647	PMT1525	PMT1526		nusA	TRUE	0.916	54.000	0.759	NA		NA
568647	568648	PMT1526	PMT1527	nusA		TRUE	0.986	-3.000	0.323	NA	Y	NA
568648	1362757	PMT1527			pseudo	FALSE	0.342	63.000	0.000	NA		NA
1362758	568651		PMT1530	pseudo		FALSE	0.344	27.000	0.000	NA		NA
568651	568652	PMT1530	RNA_19		tRNA-Thr1	FALSE	0.085	109.000	0.000	NA		NA
568654	568655	PMT1532	PMT1533	psbA		FALSE	0.702	-3.000	0.000	NA		NA
568660	568661	PMT1538	PMT1539	ecm4	F3H9.20	TRUE	0.948	-3.000	0.265	NA		NA
568661	568662	PMT1539	PMT1540	F3H9.20		TRUE	0.860	-3.000	0.028	NA		NA
568662	568663	PMT1540	PMT1541			FALSE	0.027	159.000	0.000	NA		NA
568663	568664	PMT1541	PMT1542			FALSE	0.344	27.000	0.000	NA		NA
568665	568666	PMT1543	PMT1544		obg	FALSE	0.189	82.000	0.000	NA		NA
568668	568669	PMT1546	PMT1547	mutS	T6C23.6	FALSE	0.374	-28.000	0.000	1.000	N	NA
568669	568670	PMT1547	PMT1548	T6C23.6	dnaJ3	FALSE	0.512	-24.000	0.017	1.000	N	NA
568671	568672	PMT1549	PMT1550		thyX	FALSE	0.003	915.000	0.000	NA		NA
568673	1204175	PMT1551				FALSE	0.393	54.000	0.000	NA		NA
568677	568678	PMT1555	PMT1556	icc		FALSE	0.012	225.000	0.000	NA		NA
568678	1204179	PMT1556				FALSE	0.328	23.000	0.000	NA		NA
1204179	1204180					FALSE	0.004	456.000	0.000	NA		NA
1204180	568679		PMT1557			FALSE	0.045	134.000	0.000	NA		NA
568679	568680	PMT1557	PMT1558			FALSE	0.506	18.000	0.000	0.023		NA
1204181	1362759				pseudo	FALSE	0.388	38.000	0.000	NA		NA
1362759	1204183			pseudo		FALSE	0.003	914.000	0.000	NA		NA
1204186	1203803					FALSE	0.065	121.000	0.000	NA		NA
1203803	1295565					FALSE	0.003	626.000	0.000	NA		NA
568683	1362760	PMT1561			pseudo	FALSE	0.318	16.000	0.000	NA		NA
568686	568687	PMT1564	PMT1565		cyp	FALSE	0.009	275.000	0.000	NA		NA
568687	568688	PMT1565	PMT1566	cyp		FALSE	0.013	219.000	0.000	NA		NA
568688	1208251	PMT1566				FALSE	0.003	939.000	0.000	NA		NA
1362761	568689		PMT1567	pseudo		FALSE	0.005	398.000	0.000	NA		NA
5170807	1204196					FALSE	0.079	112.000	0.000	NA		NA
1204196	1204198					FALSE	0.007	303.000	0.000	NA		NA
1204198	568690		PMT1568			FALSE	0.106	103.000	0.000	NA		NA
568690	568691	PMT1568	PMT1569		phoN	FALSE	0.173	85.000	0.000	NA		NA
568692	568693	PMT1570	PMT1571			FALSE	0.340	25.000	0.000	NA		NA
568693	568694	PMT1571	PMT1572			FALSE	0.320	21.000	0.000	NA		NA
568694	568695	PMT1572	PMT1573			FALSE	0.518	-7.000	0.000	1.000		NA
568695	568696	PMT1573	PMT1574			TRUE	0.752	48.000	0.000	0.046	N	NA
568696	568697	PMT1574	PMT1575			TRUE	0.883	11.000	0.000	0.019	Y	NA
1204199	568698		PMT1576			FALSE	0.003	744.000	0.000	NA		NA
568698	568699	PMT1576	PMT1577			FALSE	0.333	64.000	0.000	NA		NA
568699	568700	PMT1577	RNA_48		ffs	FALSE	0.005	426.000	0.000	NA		NA
568702	568703	PMT1579	PMT1580			FALSE	0.006	355.000	0.000	NA		NA
568703	568704	PMT1580	PMT1581			TRUE	0.973	0.000	0.522	NA		NA
568704	1204201	PMT1581				FALSE	0.348	29.000	0.000	NA		NA
1204202	1204203					FALSE	0.342	63.000	0.000	NA		NA
568706	568707	PMT1583	PMT1584		smc	TRUE	0.783	52.000	0.150	NA		NA
568707	568708	PMT1584	PMT1585	smc		TRUE	0.761	62.000	0.177	NA		NA
568709	568710	PMT1586	PMT1587			FALSE	0.567	49.000	0.018	NA		NA
568710	568711	PMT1587	RNA_36		tRNA-Leu4	FALSE	0.318	16.000	0.000	NA		NA
568714	568715	PMT1590	PMT1591	psbX		FALSE	0.592	105.000	0.556	NA		NA
568715	568716	PMT1591	PMT1592			FALSE	0.490	39.000	0.010	NA		NA
568716	568717	PMT1592	PMT1593			FALSE	0.702	-3.000	0.000	NA		NA
568718	568719	PMT1594	PMT1595	hli4		TRUE	0.976	0.000	0.576	1.000		NA
568719	568720	PMT1595	PMT1596		hit	FALSE	0.551	26.000	0.016	1.000		NA
1203804	568721		PMT1597			FALSE	0.449	5.000	0.000	NA		NA
568721	568722	PMT1597	PMT1598			FALSE	0.675	100.000	0.667	NA		NA
568722	1295645	PMT1598				FALSE	0.081	-39.000	0.000	NA		NA
1295645	568723		PMT1599			FALSE	0.512	4.000	0.000	NA		NA
1295763	568724		PMT1600			FALSE	0.016	202.000	0.000	NA		NA
568724	1208252	PMT1600				TRUE	0.729	0.000	0.000	NA		NA
568725	1204207	PMT1601		def		FALSE	0.031	-79.000	0.000	NA		NA
1204208	568726		PMT1602		dap2	FALSE	0.018	-105.000	0.000	NA		NA
568727	568728	PMT1603	PMT1604			TRUE	0.823	8.000	0.081	1.000	N	NA
568728	568729	PMT1604	PMT1605		sufC	TRUE	0.992	0.000	0.482	0.012	Y	NA
568729	568730	PMT1605	PMT1606	sufC		TRUE	0.965	50.000	0.466	1.000	Y	NA
568730	1204209	PMT1606				FALSE	0.393	43.000	0.000	NA		NA
568731	1208253	PMT1607				FALSE	0.393	43.000	0.000	NA		NA
1208253	568732		PMT1608			FALSE	0.009	275.000	0.000	NA		NA
568732	1203805	PMT1608				TRUE	0.900	17.000	0.947	NA		NA
1203805	1204211					FALSE	0.360	102.000	0.111	NA		NA
568739	568740	PMT1615	PMT1616			TRUE	0.888	-13.000	1.000	NA		NA
568740	568741	PMT1616	PMT1617			TRUE	0.942	10.000	1.000	1.000	N	NA
568743	568744	PMT1619	PMT1620			FALSE	0.252	177.000	0.636	NA		NA
568744	568745	PMT1620	PMT1621			TRUE	0.866	21.000	0.556	NA		NA
568747	568748	PMT1623	PMT1624		cysH	FALSE	0.325	-42.000	0.026	1.000	N	NA
568749	568750	PMT1625	PMT1626			TRUE	0.830	-3.000	0.010	1.000		NA
568750	568751	PMT1626	PMT1627		citT	TRUE	0.734	3.000	0.009	1.000		NA
568751	568752	PMT1627	PMT1628	citT	trkG	TRUE	0.835	106.000	0.500	0.002	Y	NA
568752	568753	PMT1628	PMT1629	trkG		TRUE	0.958	25.000	0.438	0.002	Y	NA
568753	568754	PMT1629	PMT1630			TRUE	0.737	6.000	0.017	NA	N	NA
568756	568757	PMT1632	PMT1633			FALSE	0.352	62.000	0.000	NA		NA
568759	1203806	PMT1635				FALSE	0.197	117.000	0.051	NA		NA
568760	1204216	PMT1636				FALSE	0.323	15.000	0.000	NA		NA
568761	568762	PMT1637	PMT1638			TRUE	0.924	57.000	1.000	NA		NA
568762	1204218	PMT1638				FALSE	0.145	93.000	0.000	NA		NA
1204218	568763		PMT1639		hrpB	FALSE	0.189	82.000	0.000	NA		NA
568763	568764	PMT1639	PMT1640	hrpB	hli2	FALSE	0.475	31.000	0.012	NA		NA
568764	1203807	PMT1640		hli2		FALSE	0.365	126.000	0.357	NA		NA
1203807	568765		PMT1641		xseA	FALSE	0.460	-10.000	0.013	NA		NA
568765	568766	PMT1641	PMT1642	xseA		TRUE	0.972	-3.000	0.412	0.001		NA
568766	1208255	PMT1642				FALSE	0.004	471.000	0.000	NA		NA
1204220	568767		PMT1643			FALSE	0.345	28.000	0.000	NA		NA
568768	568769	PMT1644	PMT1645			TRUE	0.902	2.000	0.154	NA		NA
568769	568770	PMT1645	PMT1646		rbn	FALSE	0.670	61.000	0.069	NA		NA
807275	568771		RNA_46	rrf	23S_rRNA	FALSE	0.016	-112.000	0.000	NA		NA
568771	568772	RNA_46	RNA_52	23S_rRNA		FALSE	0.014	-114.000	0.000	NA		NA
568772	568773	RNA_52	RNA_51			FALSE	0.091	107.000	0.000	NA		NA
568773	807271	RNA_51			rrl	FALSE	0.008	-2874.000	0.000	NA		NA
1204224	568774		RNA_35		tRNA-Ala4	FALSE	0.014	-114.000	0.000	NA		NA
568774	568775	RNA_35	RNA_34	tRNA-Ala4	tRNA-Ile2	FALSE	0.358	10.000	0.000	NA		NA
568775	568776	RNA_34	RNA_50	tRNA-Ile2	tRNA-SeC1	FALSE	0.020	183.000	0.000	NA		NA
568776	807273	RNA_50		tRNA-SeC1	rrs	FALSE	0.008	-1464.000	0.000	NA		NA
568778	568779	PMT1648	PMT1649	petD	petB	TRUE	0.731	91.000	0.471	0.045		NA
568780	568781	PMT1650	PMT1651	ctpA		TRUE	0.912	-3.000	0.071	1.000		NA
568781	568782	PMT1651	PMT1652		minC	FALSE	0.679	36.000	0.038	1.000		NA
568782	568783	PMT1652	PMT1653	minC	minD	FALSE	0.509	154.000	0.368	1.000	Y	NA
568783	568784	PMT1653	PMT1654	minD	minE	TRUE	0.962	5.000	0.347	NA	Y	NA
568784	1295847	PMT1654		minE		FALSE	0.363	32.000	0.000	NA		NA
1295847	568785		PMT1655			FALSE	0.020	-100.000	0.000	NA		NA
568785	568786	PMT1655	RNA_20		tRNA-Thr2	FALSE	0.375	-9.000	0.000	NA		NA
1362762	568788		PMT1657	pseudo		FALSE	0.333	13.000	0.000	NA		NA
568790	568791	PMT1659	PMT1660	sua5	hemK	TRUE	0.857	-28.000	0.444	NA	Y	NA
568791	568792	PMT1660	PMT1661	hemK	smf	TRUE	0.708	10.000	0.011	1.000	N	NA
568792	568793	PMT1661	PMT1662	smf		FALSE	0.227	91.000	0.012	NA		NA
1204231	568794		PMT1663		psbM	FALSE	0.090	-37.000	0.000	NA		NA
568794	568795	PMT1663	PMT1664	psbM	fdx	FALSE	0.274	156.000	0.472	1.000		NA
568796	568797	PMT1665	PMT1666	psbB	psbT	TRUE	0.925	52.000	0.651	0.045		NA
568797	1204232	PMT1666		psbT		FALSE	0.393	43.000	0.000	NA		NA
1204232	568798		PMT1667			FALSE	0.367	33.000	0.000	NA		NA
568798	568799	PMT1667	PMT1668		rps1a	FALSE	0.236	102.000	0.025	NA		NA
568799	568800	PMT1668	PMT1669	rps1a		TRUE	0.709	17.000	0.112	1.000		NA
568800	568801	PMT1669	PMT1670		metK	FALSE	0.683	44.000	0.030	1.000		NA
568801	568802	PMT1670	PMT1671	metK	xylB	TRUE	0.780	8.000	0.028	1.000	N	NA
568802	568803	PMT1671	PMT1672	xylB		FALSE	0.051	190.000	0.041	NA		NA
568803	568804	PMT1672	PMT1673			FALSE	0.266	82.000	0.011	NA		NA
1204233	1295703					FALSE	0.100	104.000	0.000	NA		NA
568805	568806	RNA_21	PMT1674	tRNA-Phe1		FALSE	0.380	8.000	0.000	NA		NA
1295744	568809		PMT1677		cpeS	TRUE	0.793	-10.000	0.259	NA		NA
568809	568810	PMT1677	PMT1678	cpeS	cpeT	FALSE	0.234	-87.000	0.444	NA		NA
1208257	568811		PMT1679		cpeY	FALSE	0.333	13.000	0.000	NA		NA
1204236	568812		PMT1680			FALSE	0.003	1705.000	0.000	NA		NA
568816	1204238	PMT1684				FALSE	0.408	6.000	0.000	NA		NA
1204238	568817		PMT1685		ho1	FALSE	0.076	113.000	0.000	NA		NA
568817	1204239	PMT1685		ho1		FALSE	0.256	75.000	0.000	NA		NA
1204239	568818		PMT1686		pebA	FALSE	0.419	-7.000	0.000	NA		NA
568818	568819	PMT1686	PMT1687	pebA	pebB	TRUE	0.981	-3.000	0.808	0.001		NA
568819	1295632	PMT1687		pebB		FALSE	0.393	43.000	0.000	NA		NA
1295632	568820		PMT1688		wzb	FALSE	0.668	1.000	0.000	NA		NA
568821	568822	PMT1689	PMT1690	panC	rlpA	FALSE	0.674	30.000	0.012	NA	N	NA
568823	568824	PMT1691	PMT1692	purM,purG		FALSE	0.044	171.000	0.018	NA		NA
568824	1295811	PMT1692				FALSE	0.127	97.000	0.000	NA		NA
1295811	568825		PMT1693			FALSE	0.033	-76.000	0.000	NA		NA
568825	568826	PMT1693	PMT1694			TRUE	0.882	5.000	0.346	NA		NA
568827	1204241	PMT1695				FALSE	0.333	13.000	0.000	NA		NA
1204241	568828		PMT1696			FALSE	0.345	28.000	0.000	NA		NA
568828	568829	PMT1696	PMT1697			FALSE	0.011	239.000	0.000	NA		NA
568829	1204243	PMT1697				TRUE	0.947	1.000	0.333	NA		NA
1295626	568830		PMT1698			FALSE	0.012	-126.000	0.000	NA		NA
568830	568831	PMT1698	PMT1699			FALSE	0.398	53.000	0.000	NA		NA
1295815	1295603					TRUE	0.729	0.000	0.000	NA		NA
1295603	568832		PMT1700			FALSE	0.011	237.000	0.000	NA		NA
568834	568835	PMT1701	PMT1702			TRUE	0.907	41.000	0.667	NA		NA
568836	1204244	PMT1703		rnd		TRUE	0.729	0.000	0.000	NA		NA
1204244	1204245					FALSE	0.041	137.000	0.000	NA		NA
568837	568838	PMT1704	PMT1705			TRUE	0.728	73.000	0.238	NA		NA
568840	568841	PMT1707	PMT1708	mrp	rodA	TRUE	0.959	3.000	0.041	1.000	Y	NA
568841	568842	PMT1708	PMT1709	rodA		TRUE	0.928	-3.000	0.024	1.000	N	NA
568842	568843	PMT1709	PMT1710		psaD	FALSE	0.458	119.000	0.381	1.000		NA
568843	568844	PMT1710	PMT1711	psaD	trpE	FALSE	0.700	65.000	0.091	1.000		NA
568844	568845	PMT1711	PMT1712	trpE		TRUE	0.904	-3.000	0.059	1.000		NA
568845	568846	PMT1712	PMT1713		ppc	TRUE	0.969	-3.000	0.457	1.000		NA
568846	568847	PMT1713	PMT1714	ppc		FALSE	0.682	-28.000	0.500	NA		NA
568853	568854	PMT1719	PMT1720	moeB		FALSE	0.461	-28.000	0.108	1.000		NA
568859	568860	PMT1725	PMT1726	dinG		TRUE	0.708	42.000	0.072	NA		NA
568861	568862	PMT1727	PMT1728	recA		FALSE	0.056	154.000	0.019	NA		NA
568862	568863	PMT1728	RNA_31		tRNA-Gln1	FALSE	0.296	70.000	0.000	NA		NA
568863	568864	RNA_31	PMT1729	tRNA-Gln1		FALSE	0.096	105.000	0.000	NA		NA
568864	568865	PMT1729	PMT1730		hycB	TRUE	0.815	55.000	0.189	1.000		NA
568865	568866	PMT1730	PMT1731	hycB		TRUE	0.860	72.000	0.595	1.000		NA
568867	568868	PMT1732	PMT1733	rpl3	rpl4	TRUE	0.990	0.000	0.361	0.015	Y	NA
568868	568869	PMT1733	PMT1734	rpl4	rpl23	TRUE	0.972	-7.000	0.513	0.015	Y	NA
568869	568870	PMT1734	PMT1735	rpl23	rpl2	TRUE	0.967	17.000	0.849	0.017	Y	NA
568870	568871	PMT1735	PMT1736	rpl2	rps19	TRUE	0.974	36.000	0.820	0.020	Y	NA
568871	568872	PMT1736	PMT1737	rps19	rpl22	TRUE	0.980	5.000	0.769	0.020	Y	NA
568872	568873	PMT1737	PMT1738	rpl22	rps3	TRUE	0.964	20.000	0.719	0.020	Y	NA
568873	568874	PMT1738	PMT1739	rps3	rpl16	TRUE	0.966	17.000	0.828	0.020	Y	NA
568874	568875	PMT1739	PMT1740	rpl16	rpl29	TRUE	0.984	4.000	0.802	0.015	Y	NA
568875	568876	PMT1740	PMT1741	rpl29	rps17	TRUE	0.966	18.000	0.828	0.015	Y	NA
568876	568877	PMT1741	PMT1742	rps17	rpl14	TRUE	0.993	-3.000	0.791	0.020	Y	NA
568877	568878	PMT1742	PMT1743	rpl14	rpl24	TRUE	0.974	2.000	0.071	0.020	Y	NA
568879	568880	PMT1744	PMT1745	rpl5	rps8	TRUE	0.915	25.000	0.059	0.015	Y	NA
568880	568881	PMT1745	PMT1746	rps8	rpl6	TRUE	0.966	16.000	0.808	0.015	Y	NA
568881	568882	PMT1746	PMT1747	rpl6	rpl18	TRUE	0.973	34.000	0.815	0.015	Y	NA
568882	568883	PMT1747	PMT1748	rpl18	rpsE	TRUE	0.967	15.000	0.814	0.020	Y	NA
568883	568884	PMT1748	PMT1749	rpsE	rpl15	TRUE	0.941	8.000	0.148	0.020	Y	NA
568884	568885	PMT1749	PMT1750	rpl15	secY	FALSE	0.702	108.000	0.730	1.000	N	NA
568885	568886	PMT1750	PMT1751	secY	adk	TRUE	0.761	41.000	0.019	1.000	N	NA
568886	568887	PMT1751	PMT1752	adk	rpmJ	TRUE	0.716	47.000	0.050	1.000		NA
568887	568888	PMT1752	PMT1753	rpmJ	rps13	FALSE	0.446	108.000	0.194	0.015		NA
568888	568889	PMT1753	PMT1754	rps13	rps11	TRUE	0.968	64.000	0.810	0.015	Y	NA
568889	568890	PMT1754	PMT1755	rps11	rpoA	TRUE	0.903	48.000	0.308	1.000	N	NA
568890	568891	PMT1755	PMT1756	rpoA	rpl17	TRUE	0.946	40.000	0.873	1.000	N	NA
568891	568892	PMT1756	PMT1757	rpl17	truA	TRUE	0.930	39.000	0.102	1.000	Y	NA
568892	568893	PMT1757	PMT1758	truA	rpl13	FALSE	0.225	203.000	0.058	1.000	Y	NA
568893	568894	PMT1758	PMT1759	rpl13	rps9	TRUE	0.992	-3.000	0.601	0.015	Y	NA
568894	568895	PMT1759	PMT1760	rps9	rpl31	TRUE	0.935	49.000	0.062	0.015	Y	NA
568895	568896	PMT1760	PMT1761	rpl31	prfA	TRUE	0.931	55.000	0.110	1.000	Y	NA
568898	568899	PMT1763	RNA_22	alr	tRNA-Ser4	FALSE	0.326	65.000	0.000	NA		NA
568901	568902	PMT1765	PMT1766	spr		TRUE	0.917	44.000	0.061	NA	Y	NA
568903	568904	PMT1767	PMT1768	psaI	psaL	TRUE	0.922	45.000	0.583	0.011		NA
568904	1204251	PMT1768		psaL		FALSE	0.240	-16.000	0.000	NA		NA
568905	568906	PMT1769	PMT1770	psaB	psaA	TRUE	0.892	22.000	0.513	0.002		NA
568907	568908	PMT1771	PMT1772		cbiG/cobJ fusion	FALSE	0.030	152.000	0.000	NA		NA
568909	1204253	PMT1773		crtL2		FALSE	0.702	-3.000	0.000	NA		NA
1204253	568910		PMT1774			FALSE	0.065	121.000	0.000	NA		NA
568910	568911	PMT1774	RNA_30		tRNA-Pro2	FALSE	0.016	202.000	0.000	NA		NA
568913	568914	PMT1776	PMT1777		glsF, gltS	TRUE	0.810	4.000	0.086	NA		NA
568916	568917	PMT1779	PMT1780	rps12	rps7	TRUE	0.961	66.000	0.620	0.003	Y	NA
568917	568918	PMT1780	PMT1781	rps7	fusA	TRUE	0.885	93.000	0.579	1.000	Y	NA
568918	568919	PMT1781	PMT1782	fusA	tufA	TRUE	0.965	43.000	0.400	0.001	Y	NA
568919	1295734	PMT1782		tufA		FALSE	0.121	-31.000	0.000	NA		NA
1295734	568920		PMT1783		rps10	FALSE	0.367	33.000	0.000	NA		NA
568920	568921	PMT1783	PMT1784	rps10		FALSE	0.640	59.000	0.025	1.000		NA
568921	568922	PMT1784	PMT1785			FALSE	0.632	21.000	0.047	1.000		NA
568925	568926	PMT1788	PMT1789	rnhB	rne	FALSE	0.196	-52.000	0.000	0.017	N	NA
568926	568927	PMT1789	PMT1790	rne		FALSE	0.032	271.000	0.000	1.000	N	NA
568928	568929	PMT1791	PMT1792			FALSE	0.696	25.000	0.110	NA		NA
568929	568930	PMT1792	PMT1793			TRUE	0.834	57.000	0.289	NA		NA
1295809	568932		PMT1795		aroC	FALSE	0.091	107.000	0.000	NA		NA
568932	1362763	PMT1795		aroC	pseudo	FALSE	0.076	113.000	0.000	NA		NA
568933	568934	PMT1796	PMT1797		eda	TRUE	0.818	62.000	0.294	NA		NA
568934	568935	PMT1797	PMT1798	eda	ftsH2	TRUE	0.844	-16.000	0.415	1.000	N	NA
568935	568936	PMT1798	PMT1799	ftsH2	cysD	TRUE	0.822	46.000	0.061	1.000	N	NA
568936	568937	PMT1799	PMT1800	cysD	psbO	FALSE	0.108	155.000	0.064	1.000		NA
568939	568940	PMT1802	PMT1803	dfp		FALSE	0.574	-10.000	0.030	NA		NA
568941	1295605	RNA_23		tRNA-Ala3		FALSE	0.256	75.000	0.000	NA		NA
1295605	568942		PMT1804			FALSE	0.472	-30.000	0.188	NA		NA
568942	568943	PMT1804	PMT1805			FALSE	0.327	126.000	0.278	NA		NA
568943	568944	PMT1805	PMT1806			TRUE	0.778	80.000	0.556	NA		NA
568945	568946	PMT1807	PMT1808	pyrB	mpg	TRUE	0.920	-3.000	0.019	1.000	N	NA
568946	568947	PMT1808	PMT1809	mpg		FALSE	0.031	181.000	0.000	1.000		NA
568947	568948	PMT1809	PMT1810			FALSE	0.010	466.000	0.000	0.012		NA
568948	568949	PMT1810	PMT1811			FALSE	0.166	112.000	0.000	0.012		NA
1204259	568952		PMT1814			FALSE	0.045	-61.000	0.000	NA		NA
568952	568953	PMT1814	PMT1815		gatC	TRUE	0.805	-3.000	0.015	NA		NA
568954	568955	PMT1816	RNA_29	crtR	tRNA-Leu3	FALSE	0.397	44.000	0.000	NA		NA
1204260	1204261					FALSE	0.702	-3.000	0.000	NA		NA
1204261	568957		PMT1818			FALSE	0.358	31.000	0.000	NA		NA
568958	568959	PMT1819	PMT1820			TRUE	0.859	3.000	0.106	NA		NA
568959	568960	PMT1820	PMT1821			TRUE	0.949	0.000	0.226	NA		NA
568960	568961	PMT1821	PMT1822			TRUE	0.968	-3.000	0.324	NA	N	NA
1295576	568963		PMT1824			FALSE	0.161	89.000	0.000	NA		NA
568966	1295733	PMT1827				FALSE	0.333	13.000	0.000	NA		NA
1295733	568967		PMT1828		dcd	FALSE	0.127	97.000	0.000	NA		NA
568967	568968	PMT1828	PMT1829	dcd		TRUE	0.955	0.000	0.091	1.000	N	NA
568969	568970	PMT1830	PMT1831	rph	ntcA	FALSE	0.151	141.000	0.015	1.000	N	NA
568970	568971	PMT1831	PMT1832	ntcA		TRUE	0.872	66.000	0.612	NA		NA
568971	568972	PMT1832	PMT1833			FALSE	0.308	-30.000	0.047	NA		NA
568973	568974	PMT1834	PMT1835		pth	TRUE	0.858	0.000	0.022	NA		NA
568974	568975	PMT1835	PMT1836	pth		TRUE	0.727	8.000	0.011	1.000	N	NA
568975	568976	PMT1836	PMT1837		psbH	TRUE	0.837	35.000	0.262	1.000		NA
568979	568980	PMT1840	PMT1841	psbI		FALSE	0.080	259.000	0.324	NA		NA
568981	568982	PMT1842	PMT1843		leuD	FALSE	0.568	73.000	0.064	NA		NA
568982	568983	PMT1843	PMT1844	leuD	leuC	TRUE	0.951	60.000	0.268	0.001	Y	NA
568983	568984	PMT1844	PMT1845	leuC	cinA	FALSE	0.635	26.000	0.032	1.000		NA
568984	568985	PMT1845	PMT1846	cinA	rfe	FALSE	0.399	-25.000	0.032	1.000		NA
568985	568986	PMT1846	PMT1847	rfe	glyA	FALSE	0.635	89.000	0.137	1.000	N	NA
568988	568989	PMT1848	PMT1849			TRUE	0.909	43.000	0.667	NA		NA
568989	568990	PMT1849	PMT1850			TRUE	0.833	26.000	0.359	NA		NA
568994	568995	PMT1854	PMT1855	lytB		TRUE	0.760	62.000	0.175	NA		NA
568995	568996	PMT1855	PMT1856			FALSE	0.326	65.000	0.000	NA		NA
1204268	569000		PMT1860			FALSE	0.393	43.000	0.000	NA		NA
569002	569003	PMT1862	PMT1863	tgt	psbK	FALSE	0.653	31.000	0.034	1.000		NA
569004	569005	PMT1864	PMT1865	rffM		FALSE	0.032	179.000	0.000	1.000		NA
569005	569006	PMT1865	PMT1866			TRUE	0.803	4.000	0.078	NA		NA
569006	569007	PMT1866	PMT1867			FALSE	0.336	101.000	0.077	NA		NA
569008	569009	PMT1868	PMT1869	pyrE		TRUE	0.888	-3.000	0.034	1.000		NA
569011	569012	PMT1871	PMT1872			TRUE	0.923	-3.000	0.020	1.000	N	NA
569014	1204270	PMT1874				FALSE	0.318	16.000	0.000	NA		NA
569015	569016	PMT1875	PMT1876			FALSE	0.345	28.000	0.000	NA		NA
569016	569017	PMT1876	PMT1877			FALSE	0.240	-16.000	0.000	NA		NA
569017	569018	PMT1877	PMT1878			FALSE	0.333	13.000	0.000	NA		NA
569019	569020	PMT1879	PMT1880		hisB	FALSE	0.698	67.000	0.020	1.000	N	NA
569020	569021	PMT1880	PMT1881	hisB	fabI	TRUE	0.734	28.000	0.021	1.000	N	NA
569021	569022	PMT1881	PMT1882	fabI		FALSE	0.119	100.000	0.000	NA		NA
569023	569024	PMT1883	PMT1884		degT	TRUE	0.713	55.000	0.057	1.000		NA
569025	569026	PMT1885	PMT1886		folK	FALSE	0.680	55.000	0.033	1.000		NA
569028	569029	PMT1888	PMT1889			TRUE	0.992	0.000	0.690	NA	Y	NA
569031	569032	PMT1891	PMT1892	ndhJ	ndhK	TRUE	0.990	-3.000	0.406	0.002	Y	NA
569032	569033	PMT1892	PMT1893	ndhK	ndhC	TRUE	0.973	5.000	0.428	0.002	Y	NA
569034	569035	PMT1894	PMT1895	rub		TRUE	0.870	13.000	0.521	NA		NA
569035	569036	PMT1895	PMT1896		psbE	FALSE	0.592	107.000	0.625	NA		NA
569036	569037	PMT1896	PMT1897	psbE	psbF	TRUE	0.960	4.000	0.837	0.002		NA
569037	569038	PMT1897	PMT1898	psbF	psbL	TRUE	0.916	16.000	0.872	0.003		NA
569038	569039	PMT1898	PMT1899	psbL	psbJ	TRUE	0.922	13.000	0.878	0.003		NA
1204272	1204273					FALSE	0.065	121.000	0.000	NA		NA
1204273	569041		PMT1901			FALSE	0.702	-3.000	0.000	NA		NA
1204274	1204275					FALSE	0.264	-15.000	0.000	NA		NA
569043	569044	PMT1903	PMT1904		ugd	TRUE	0.982	-3.000	0.157	1.000	Y	NA
569044	569045	PMT1904	PMT1905	ugd	hisS	FALSE	0.321	104.000	0.008	1.000	N	NA
569045	1295563	PMT1905		hisS		FALSE	0.204	80.000	0.000	NA		NA
1295563	1204276					FALSE	0.038	140.000	0.000	NA		NA
1204276	1204278					FALSE	0.006	333.000	0.000	NA		NA
569047	569048	PMT1907	PMT1908	galE		TRUE	0.853	63.000	0.000	NA	Y	NA
1362764	569050		PMT1910	pseudo		FALSE	0.348	29.000	0.000	NA		NA
569051	569052	PMT1911	PMT1912	kpsF		TRUE	0.886	-3.000	0.031	1.000		NA
569052	569053	PMT1912	PMT1913			FALSE	0.072	149.000	0.023	NA		NA
569054	569055	PMT1914	PMT1915	kdsB		FALSE	0.648	6.000	0.020	1.000		NA
569056	1362766	PMT1916			pseudo	TRUE	0.729	0.000	0.000	NA		NA
1362766	569057		PMT1917	pseudo	uvrD	FALSE	0.324	22.000	0.000	NA		NA
569058	569059	PMT1918	PMT1919			FALSE	0.578	3.000	0.000	NA		NA
569060	569061	PMT1920	PMT1921			TRUE	0.729	0.000	0.000	NA		NA
569061	569062	PMT1921	PMT1922			FALSE	0.367	33.000	0.000	NA		NA
569062	569063	PMT1922	PMT1923			FALSE	0.393	54.000	0.000	NA		NA
569063	569064	PMT1923	PMT1924			FALSE	0.702	-3.000	0.000	NA		NA
1204281	569065		PMT1925		kdsA	FALSE	0.344	27.000	0.000	NA		NA
1204282	569066		PMT1926			FALSE	0.702	-3.000	0.000	NA		NA
569066	569067	PMT1926	PMT1927			TRUE	0.898	8.000	0.000	0.013	Y	NA
569067	569068	PMT1927	PMT1928			TRUE	0.984	-3.000	0.133	0.013	Y	NA
569068	569069	PMT1928	PMT1929			TRUE	0.883	6.000	0.200	1.000	N	NA
569069	569070	PMT1929	PMT1930			FALSE	0.227	175.000	0.435	1.000		NA
569070	569071	PMT1930	PMT1932			TRUE	0.880	29.000	0.478	1.000		NA
1204284	569072		PMT1933			FALSE	0.702	-3.000	0.000	NA		NA
569073	1204285	PMT1934				FALSE	0.344	26.000	0.000	NA		NA
569074	569075	PMT1935	PMT1936	icd		FALSE	0.004	502.000	0.000	NA		NA
569078	569079	PMT1939	PMT1940	glcE		FALSE	0.004	613.000	0.000	NA		NA
569079	569080	PMT1940	PMT1941			FALSE	0.408	6.000	0.000	NA		NA
569081	569082	PMT1942	PMT1943	galM		TRUE	0.860	8.000	0.339	1.000		NA
569082	569083	PMT1943	PMT1944		kefB	FALSE	0.698	75.000	0.179	1.000		NA
569083	569084	PMT1944	PMT1945	kefB		FALSE	0.046	-55.000	0.000	NA		NA
569086	569087	PMT1947	PMT1948			TRUE	0.926	38.000	0.950	NA		NA
569087	569088	PMT1948	RNA_27		tRNA-Arg2	FALSE	0.135	95.000	0.000	NA		NA
569088	1204288	RNA_27		tRNA-Arg2		FALSE	0.341	12.000	0.000	NA		NA
569089	807276	RNA_47		rnpB	rnpB	FALSE	0.010	-397.000	0.000	NA		NA
807276	1204289			rnpB		FALSE	0.090	-37.000	0.000	NA		NA
1204289	569090		PMT1949		rnc	TRUE	0.729	0.000	0.000	NA		NA
569092	569093	PMT1951	PMT1952	rimM	manC	TRUE	0.728	57.000	0.011	1.000	N	NA
569094	569095	PMT1953	PMT1954	glmS	psaC	FALSE	0.545	86.000	0.031	1.000	N	NA
569096	569097	PMT1955	PMT1956	acpP	fabF	TRUE	0.950	9.000	0.346	1.000	Y	NA
569097	569098	PMT1956	PMT1957	fabF	tktA	TRUE	0.821	53.000	0.062	1.000	N	NA
569098	569099	PMT1957	PMT1958	tktA	rfbB	FALSE	0.450	135.000	0.055	1.000	Y	NA
569099	569100	PMT1958	PMT1959	rfbB		FALSE	0.178	196.000	0.000	1.000	Y	NA
1295779	569101		PMT1960			FALSE	0.009	279.000	0.000	NA		NA
569101	569102	PMT1960	PMT1961			TRUE	0.705	37.000	0.073	NA		NA
1204290	569103		PMT1962			FALSE	0.011	242.000	0.000	NA		NA
569103	569104	PMT1962	PMT1963		rbfA	TRUE	0.784	3.000	0.030	NA		NA
569104	569105	PMT1963	PMT1964	rbfA		TRUE	0.930	-3.000	0.025	1.000	N	NA
569105	569106	PMT1964	PMT1965			FALSE	0.429	-37.000	0.081	1.000	N	NA
569106	569107	PMT1965	PMT1966		hemD	TRUE	0.926	-3.000	0.022	1.000	N	NA
1208262	569108		PMT1967			FALSE	0.429	-31.000	0.156	NA		NA
569108	569109	PMT1967	PMT1968		crtQ	TRUE	0.960	3.000	0.800	NA		NA
569110	569111	PMT1969	PMT1970			TRUE	0.851	60.000	0.375	NA		NA
569111	569112	PMT1970	PMT1971			TRUE	0.947	2.000	0.389	NA		NA
569112	569113	PMT1971	PMT1972			FALSE	0.702	-3.000	0.000	NA		NA
569114	569115	PMT1973	PMT1974			TRUE	0.759	29.000	0.143	1.000		NA
569117	569118	PMT1976	PMT1977			TRUE	0.962	-3.000	0.364	1.000		NA
569118	569119	PMT1977	PMT1978		cysK2	TRUE	0.899	24.000	0.714	1.000		NA
569119	569120	PMT1978	PMT1979	cysK2	som	FALSE	0.046	149.000	0.000	1.000		NA
569120	1295816	PMT1979		som		FALSE	0.082	110.000	0.000	NA		NA
1295816	1204291					FALSE	0.013	-118.000	0.000	NA		NA
569121	569122	PMT1980	PMT1981			FALSE	0.008	281.000	0.000	NA		NA
569122	569123	PMT1981	PMT1982			FALSE	0.397	44.000	0.000	NA		NA
569123	569124	PMT1982	PMT1983			FALSE	0.490	82.000	0.091	NA		NA
1204293	569125		PMT1984			FALSE	0.316	18.000	0.000	NA		NA
569125	569126	PMT1984	PMT1985			FALSE	0.011	235.000	0.000	NA		NA
569127	569128	PMT1986	PMT1987			TRUE	0.749	42.000	0.117	NA		NA
569128	569129	PMT1987	RNA_24		tRNA-Asn1	FALSE	0.333	24.000	0.000	NA		NA
569129	569130	RNA_24	PMT1988	tRNA-Asn1	rpaA	FALSE	0.008	281.000	0.000	NA		NA
569131	569132	PMT1989	PMT1990	holB	tmk	TRUE	0.967	-3.000	0.254	1.000	N	NA
569132	569133	PMT1990	PMT1991	tmk	zntA	TRUE	0.935	-3.000	0.020	0.065	N	NA
569136	569137	PMT1994	PMT1995	rpaB	plsX	FALSE	0.589	-19.000	0.026	1.000	N	NA
569137	569138	PMT1995	PMT1996	plsX	fabH	TRUE	0.962	56.000	0.380	0.003	Y	NA
569138	569139	PMT1996	PMT1997	fabH	fabD	TRUE	0.915	29.000	0.043	0.003	Y	NA
569139	569140	PMT1997	PMT1998	fabD	plsC	TRUE	0.966	4.000	0.218	1.000	Y	NA
1203809	569141		PMT1999			TRUE	0.800	-3.000	0.014	NA		NA
569141	569142	PMT1999	PMT2000		ycf34	TRUE	0.846	-3.000	0.023	NA		NA
569143	1204296	PMT2001				FALSE	0.156	-27.000	0.000	NA		NA
1204296	569144		PMT2002			FALSE	0.702	-3.000	0.000	NA		NA
569145	569146	PMT2003	PMT2004	crtB	pds	TRUE	0.949	4.000	0.691	1.000		NA
569147	569148	PMT2005	PMT2006			TRUE	0.939	-3.000	0.205	NA		NA
569150	569151	PMT2008	PMT2009		ndhF	FALSE	0.636	35.000	0.041	NA		NA
569151	569152	PMT2009	PMT2010	ndhF	ndhD	TRUE	0.798	89.000	0.050	0.002	Y	NA
569152	569153	PMT2010	PMT2011	ndhD		FALSE	0.007	442.000	0.009	NA		NA
569153	569154	PMT2011	PMT2012			FALSE	0.649	46.000	0.034	NA		NA
1295544	569157		PMT2015			FALSE	0.028	155.000	0.000	NA		NA
569157	569158	PMT2015	PMT2016			TRUE	0.725	36.000	0.101	NA		NA
569158	569159	PMT2016	PMT2017		ndhE	TRUE	0.786	13.000	0.071	1.000	N	NA
569159	569160	PMT2017	PMT2018	ndhE	ndhG	TRUE	0.958	16.000	0.506	0.002	Y	NA
569160	569161	PMT2018	PMT2019	ndhG	ndhI	TRUE	0.986	-3.000	0.192	0.005	Y	NA
569161	1204297	PMT2019		ndhI		FALSE	0.401	46.000	0.000	NA		NA
1204297	569162		PMT2020		ndhA	FALSE	0.240	-16.000	0.000	NA		NA
569162	569163	PMT2020	PMT2021	ndhA	gltA	TRUE	0.921	25.000	0.137	1.000	Y	NA
569163	569164	PMT2021	PMT2022	gltA		TRUE	0.908	2.000	0.171	NA		NA
569164	569165	PMT2022	PMT2023			FALSE	0.317	19.000	0.000	NA		NA
569165	569166	PMT2023	PMT2024			FALSE	0.059	-49.000	0.000	NA		NA
569166	569167	PMT2024	PMT2025			FALSE	0.358	31.000	0.000	NA		NA
569169	1295577	PMT2027		trpB		FALSE	0.345	28.000	0.000	NA		NA
569172	1295834	PMT2030				TRUE	0.748	31.000	0.150	NA		NA
1295762	569173		RNA_25		tRNA-Pseudo1	FALSE	0.031	-79.000	0.000	NA		NA
569173	569174	RNA_25	PMT2031	tRNA-Pseudo1		FALSE	0.316	18.000	0.000	NA		NA
569174	569175	PMT2031	PMT2032			TRUE	0.847	3.000	0.061	1.000		NA
569175	569176	PMT2032	PMT2033			TRUE	0.729	0.000	0.000	NA		NA
569176	569177	PMT2033	PMT2034			FALSE	0.408	6.000	0.000	NA		NA
569177	569178	PMT2034	PMT2035			FALSE	0.273	-63.000	0.250	1.000		NA
569178	569179	PMT2035	PMT2036			FALSE	0.003	696.000	0.000	NA		NA
569180	569181	PMT2037	PMT2038		purE	FALSE	0.308	76.000	0.003	NA		NA
569182	569183	PMT2039	PMT2040	nagA	chlM	TRUE	0.822	27.000	0.128	1.000	N	NA
569184	569185	PMT2041	PMT2042			FALSE	0.556	61.000	0.022	NA		NA
569185	569186	PMT2042	PMT2043			TRUE	0.887	4.000	0.074	1.000	N	NA
569186	569187	PMT2043	PMT2044			TRUE	0.746	71.000	0.244	NA		NA
569188	569189	PMT2045	PMT2046			FALSE	0.135	95.000	0.000	NA		NA
569190	569191	PMT2047	PMT2048			FALSE	0.412	-10.000	0.003	NA		NA
569192	1203810	PMT2049		ndhH		FALSE	0.014	213.000	0.000	NA		NA
1203810	569193		PMT2050			FALSE	0.011	-195.000	0.000	NA		NA
1295713	569194		PMT2051			FALSE	0.015	204.000	0.000	NA		NA
569194	569195	PMT2051	PMT2052			FALSE	0.358	10.000	0.000	NA		NA
569197	1295653	PMT2054				FALSE	0.404	50.000	0.000	NA		NA
569199	569200	PMT2056	PMT2057		menE	TRUE	0.809	-3.000	0.016	NA		NA
569200	569201	PMT2057	PMT2058	menE	menC	TRUE	0.960	-3.000	0.104	0.001	N	NA
569201	569202	PMT2058	PMT2059	menC	menA	TRUE	0.853	5.000	0.066	1.000	N	NA
569204	569205	PMT2061	PMT2062	gshB	grxC	FALSE	0.538	-25.000	0.028	1.000	N	NA
569206	569207	PMT2063	PMT2064	prfB		FALSE	0.554	13.000	0.025	NA		NA
569207	569208	PMT2064	PMT2065			FALSE	0.636	8.000	0.039	NA		NA
569208	569209	PMT2065	PMT2066		dgkA	TRUE	0.710	25.000	0.123	NA		NA
569209	569210	PMT2066	PMT2067	dgkA	pabA	TRUE	0.848	15.000	0.231	1.000	N	NA
569210	569211	PMT2067	PMT2068	pabA		TRUE	0.784	27.000	0.231	NA		NA
569212	569213	PMT2069	PMT2070	hisC	argS	TRUE	0.925	0.000	0.015	1.000	N	NA
1295688	569214		PMT2071			FALSE	0.398	53.000	0.000	NA		NA
1295662	1203811					FALSE	0.316	17.000	0.000	NA		NA
569215	1203811	PMT2072				FALSE	0.010	-203.000	0.000	NA		NA
1203811	1204302					FALSE	0.070	119.000	0.000	NA		NA
1204302	569216		PMT2073		nadC	FALSE	0.039	139.000	0.000	NA		NA
569216	569217	PMT2073	PMT2074	nadC	thdF	FALSE	0.240	98.000	0.014	1.000		NA
569218	1203812	PMT2075				FALSE	0.006	341.000	0.000	NA		NA
569219	1204303	PMT2076				FALSE	0.008	294.000	0.000	NA		NA
1204303	1204304					FALSE	0.408	6.000	0.000	NA		NA
1204305	1204306					FALSE	0.041	137.000	0.000	NA		NA
1204306	1203813					FALSE	0.006	360.000	0.000	NA		NA
1203813	1362767				pseudo	FALSE	0.010	265.000	0.000	NA		NA
569221	569222	PMT2078	PMT2079			FALSE	0.004	625.000	0.000	NA		NA
569222	1204311	PMT2079				FALSE	0.003	663.000	0.000	NA		NA
569223	569224	PMT2080	PMT2081			FALSE	0.434	130.000	0.579	NA		NA
569224	569225	PMT2081	PMT2082			TRUE	0.974	0.000	0.576	NA		NA
569227	569228	PMT2084	PMT2085	gloA	clpB2	TRUE	0.826	6.000	0.061	1.000	N	NA
569228	569229	PMT2085	PMT2086	clpB2	secE	FALSE	0.660	74.000	0.023	1.000	N	NA
569229	569230	PMT2086	PMT2087	secE	nusG	TRUE	0.919	70.000	0.843	1.000	N	NA
569230	569231	PMT2087	PMT2088	nusG	rpl11	FALSE	0.680	110.000	0.681	1.000	N	NA
569231	569232	PMT2088	PMT2089	rpl11	rpl1	TRUE	0.927	86.000	0.838	0.019	Y	NA
569232	569233	PMT2089	PMT2090	rpl1	rpl10	FALSE	0.257	237.000	0.302	1.000	Y	NA
569233	569234	PMT2090	PMT2091	rpl10	rpl12	TRUE	0.975	50.000	0.884	1.000	Y	NA
569234	1295856	PMT2091		rpl12		FALSE	0.630	2.000	0.000	NA		NA
5170808	569235		PMT2092			FALSE	0.177	84.000	0.000	NA		NA
569236	569237	PMT2093	PMT2094	rnhA	pyrD	TRUE	0.753	12.000	0.031	1.000	N	NA
569237	569238	PMT2094	PMT2095	pyrD		FALSE	0.479	36.000	0.009	NA		NA
569238	569239	PMT2095	PMT2096			TRUE	0.922	0.000	0.105	NA		NA
569239	569240	PMT2096	PMT2097			TRUE	0.882	-3.000	0.053	NA		NA
569240	569241	PMT2097	PMT2098		gspD	FALSE	0.463	77.000	0.040	NA		NA
569246	569247	PMT2103	PMT2104		GSTTLp28,P28,GSTO1	FALSE	0.702	-3.000	0.000	NA		NA
569247	569248	PMT2104	PMT2105	GSTTLp28,P28,GSTO1	mmsB	FALSE	0.070	183.000	0.000	1.000	N	NA
569248	1295710	PMT2105		mmsB		FALSE	0.014	210.000	0.000	NA		NA
1295710	569249		PMT2106		pgk	FALSE	0.353	30.000	0.000	NA		NA
569250	569251	PMT2107	PMT2108			FALSE	0.393	-24.000	0.023	1.000		NA
569251	569252	PMT2108	PMT2109		rluD	TRUE	0.852	-3.000	0.018	1.000		NA
1362768	569253		PMT2110	pseudo		FALSE	0.019	188.000	0.000	NA		NA
569254	569255	PMT2111	PMT2112	spoT		FALSE	0.003	707.000	0.000	NA		NA
569255	569256	PMT2112	PMT2113			FALSE	0.368	59.000	0.000	NA		NA
569256	569257	PMT2113	PMT2114			FALSE	0.003	904.000	0.000	NA		NA
569259	1362769	PMT2116			pseudo	FALSE	0.244	76.000	0.000	NA		NA
1204314	1204315					FALSE	0.512	4.000	0.000	NA		NA
1204315	1362770				pseudo	FALSE	0.318	16.000	0.000	NA		NA
1362770	569260		PMT2117	pseudo		FALSE	0.140	94.000	0.000	NA		NA
569260	569261	PMT2117	PMT2118			FALSE	0.024	167.000	0.000	NA		NA
569261	569262	PMT2118	PMT2119			FALSE	0.013	216.000	0.000	NA		NA
569262	569263	PMT2119	PMT2120			TRUE	0.805	79.000	0.667	NA		NA
569263	569264	PMT2120	PMT2121			FALSE	0.281	166.000	0.667	NA		NA
569264	569265	PMT2121	PMT2122			FALSE	0.499	123.000	0.667	NA		NA
569265	569266	PMT2122	PMT2123			FALSE	0.657	102.000	0.667	NA		NA
569266	569267	PMT2123	PMT2124			FALSE	0.325	151.000	0.667	NA		NA
569268	1295650	PMT2125				FALSE	0.024	-94.000	0.000	NA		NA
1295650	1204316					TRUE	0.729	0.000	0.000	NA		NA
1204316	1204317					FALSE	0.702	-3.000	0.000	NA		NA
1204317	1204318					FALSE	0.046	133.000	0.000	NA		NA
569269	569270	PMT2126	PMT2127			FALSE	0.384	37.000	0.000	NA		NA
569270	1204319	PMT2127				FALSE	0.230	77.000	0.000	NA		NA
1204319	569271		PMT2128			FALSE	0.039	139.000	0.000	NA		NA
569272	569273	PMT2129	PMT2130			FALSE	0.135	255.000	0.667	NA		NA
569273	569274	PMT2130	PMT2131			FALSE	0.026	161.000	0.000	NA		NA
569274	569275	PMT2131	PMT2132			FALSE	0.052	130.000	0.000	NA		NA
569276	1295846	PMT2133				FALSE	0.090	-37.000	0.000	NA		NA
569277	1204320	PMT2134				FALSE	0.050	131.000	0.000	NA		NA
1204320	569278		PMT2135		argJ	FALSE	0.344	27.000	0.000	NA		NA
569279	569280	PMT2136	PMT2137	coaE		FALSE	0.041	151.000	0.002	NA		NA
569280	1204321	PMT2137				FALSE	0.116	101.000	0.000	NA		NA
1204321	569281		PMT2138			FALSE	0.091	107.000	0.000	NA		NA
569283	1204323	PMT2140		thiO		FALSE	0.004	488.000	0.000	NA		NA
1204323	569284		PMT2141			FALSE	0.009	269.000	0.000	NA		NA
569284	569285	PMT2141	PMT2142			FALSE	0.449	5.000	0.000	NA		NA
569285	569286	PMT2142	PMT2143			FALSE	0.005	387.000	0.000	NA		NA
569286	569287	PMT2143	PMT2144			TRUE	0.978	-3.000	0.070	1.000	Y	NA
569287	569288	PMT2144	PMT2145			TRUE	0.906	13.000	0.070	1.000	Y	NA
569289	569290	PMT2146	PMT2147			FALSE	0.244	76.000	0.000	NA		NA
569290	569291	PMT2147	PMT2148		ndk	FALSE	0.333	64.000	0.000	NA		NA
1295530	569292		PMT2149			FALSE	0.061	123.000	0.000	NA		NA
569292	569293	PMT2149	PMT2150		speA	FALSE	0.045	236.000	0.006	1.000	N	NA
569295	569296	PMT2152	PMT2153			TRUE	0.866	19.000	0.571	NA		NA
569296	569297	PMT2153	PMT2154			FALSE	0.124	98.000	0.000	NA		NA
569297	569298	PMT2154	PMT2155			FALSE	0.006	356.000	0.000	NA		NA
569298	569299	PMT2155	PMT2156			FALSE	0.367	9.000	0.000	NA		NA
569301	569302	PMT2158	PMT2159	hepA		FALSE	0.529	103.000	0.311	1.000		NA
569302	569303	PMT2159	PMT2160			TRUE	0.801	-7.000	0.128	1.000		NA
569303	1204325	PMT2160				FALSE	0.023	175.000	0.000	NA		NA
569304	569305	PMT2161	PMT2162			TRUE	0.978	0.000	0.061	NA	Y	NA
569305	569306	PMT2162	PMT2163			TRUE	0.946	-7.000	0.202	NA	Y	NA
569306	569307	PMT2163	PMT2164			TRUE	0.814	60.000	0.086	1.000	N	NA
569307	569308	PMT2164	PMT2165			TRUE	0.992	0.000	0.457	0.002	Y	NA
569308	569309	PMT2165	PMT2166			TRUE	0.882	11.000	0.000	0.030	Y	NA
569309	1295771	PMT2166				FALSE	0.578	3.000	0.000	NA		NA
1295771	569310		PMT2167			FALSE	0.074	-43.000	0.000	NA		NA
569311	569312	PMT2168	PMT2169		gcvP	FALSE	0.576	60.000	0.024	NA		NA
569312	569313	PMT2169	PMT2170	gcvP	gcsH	FALSE	0.623	132.000	0.249	0.001	Y	NA
569313	569314	PMT2170	PMT2171	gcsH		TRUE	0.763	21.000	0.060	1.000	N	NA
569317	569318	PMT2174	PMT2175	desC	rpl9	TRUE	0.735	44.000	0.007	1.000	N	NA
569318	569319	PMT2175	PMT2176	rpl9	dnaB	TRUE	0.768	63.000	0.048	1.000	N	NA
569319	569320	PMT2176	PMT2177	dnaB	gidA	TRUE	0.749	52.000	0.012	1.000	N	NA
569320	569321	PMT2177	PMT2178	gidA		FALSE	0.040	-88.000	0.012	NA		NA
569321	569322	PMT2178	PMT2179		ubiC	FALSE	0.606	60.000	0.032	NA		NA
569322	569323	PMT2179	PMT2180	ubiC		FALSE	0.353	88.000	0.035	NA		NA
569324	569325	PMT2181	PMT2182			FALSE	0.515	106.000	0.387	NA		NA
569325	1204329	PMT2182				FALSE	0.074	-43.000	0.000	NA		NA
569326	569327	PMT2183	PMT2184		lig	FALSE	0.487	28.000	0.016	NA		NA
569327	569328	PMT2184	PMT2185	lig		FALSE	0.477	40.000	0.006	NA		NA
569331	569332	PMT2188	PMT2189			TRUE	0.925	2.000	0.239	NA		NA
569332	569333	PMT2189	PMT2190			TRUE	0.972	-3.000	0.648	NA		NA
569333	569334	PMT2190	PMT2191		valS	FALSE	0.681	5.000	0.005	0.062		NA
569334	569335	PMT2191	PMT2192	valS		FALSE	0.417	25.000	0.004	NA		NA
569336	1295600	PMT2193				FALSE	0.145	93.000	0.000	NA		NA
1295600	1204330					FALSE	0.244	76.000	0.000	NA		NA
1204330	569337		PMT2194			FALSE	0.010	262.000	0.000	NA		NA
569337	569338	PMT2194	PMT2195		petF	FALSE	0.158	136.000	0.098	NA		NA
569340	569341	PMT2197	PMT2198			FALSE	0.702	-3.000	0.000	NA		NA
569341	569342	PMT2198	PMT2199		pdxH	FALSE	0.016	202.000	0.000	NA		NA
569342	569343	PMT2199	PMT2200	pdxH		FALSE	0.457	82.000	0.000	1.000	N	NA
569344	569345	PMT2201	PMT2202			TRUE	0.960	-7.000	0.286	0.062	Y	NA
569346	569347	PMT2203	PMT2204			TRUE	0.822	54.000	0.238	NA		NA
569348	1295777	PMT2205				TRUE	0.921	-3.000	0.133	NA		NA
1295777	569349		PMT2206			FALSE	0.337	-10.000	0.000	NA		NA
569349	569350	PMT2206	PMT2207			TRUE	0.737	14.000	0.172	NA		NA
569350	1362772	PMT2207			pseudo	FALSE	0.019	189.000	0.000	NA		NA
569352	1295623	PMT2209				FALSE	0.024	168.000	0.000	NA		NA
1295623	569353		RNA_26		tRNA-Val3	FALSE	0.005	381.000	0.000	NA		NA
569354	569355	PMT2210	PMT2211			FALSE	0.150	-46.000	0.029	NA		NA
569355	1295706	PMT2211				FALSE	0.122	99.000	0.000	NA		NA
1295706	569356		PMT2212			FALSE	0.006	352.000	0.000	NA		NA
569357	569358	PMT2213	PMT2214	speE	speB	TRUE	0.980	0.000	0.064	1.000	Y	NA
569360	569361	PMT2216	PMT2217	aspS		FALSE	0.651	69.000	0.009	1.000	N	NA
569361	569362	PMT2217	PMT2218			FALSE	0.302	123.000	0.056	1.000	N	NA
569362	569363	PMT2218	PMT2219		pyrG	TRUE	0.726	38.000	0.006	1.000	N	NA
569363	569364	PMT2219	PMT2220	pyrG	nrdG	TRUE	0.917	-3.000	0.016	1.000	N	NA
569366	569367	PMT2222	PMT2223			TRUE	0.779	-3.000	0.000	1.000		NA
569367	569368	PMT2223	PMT2224		pabC	TRUE	0.983	-3.000	0.180	1.000	Y	NA
569369	569370	PMT2225	PMT2226	urtE	urtD	TRUE	0.818	44.000	0.126	0.011		NA
569370	569371	PMT2226	PMT2227	urtD	urtC	TRUE	0.932	-3.000	0.137	1.000		NA
569371	569372	PMT2227	PMT2228	urtC	urtB	TRUE	0.981	5.000	0.888	0.016	Y	NA
569372	569373	PMT2228	PMT2229	urtB	urtA	TRUE	0.831	99.000	0.429	NA	Y	NA
569373	569374	PMT2229	PMT2230	urtA	ureG	FALSE	0.339	118.000	0.079	NA	N	NA
569374	569375	PMT2230	PMT2231	ureG	ureF	TRUE	0.993	0.000	0.550	0.003	Y	NA
569375	569376	PMT2231	PMT2232	ureF	ureE	TRUE	0.993	0.000	0.560	0.003	Y	NA
569376	1295534	PMT2232		ureE		FALSE	0.056	127.000	0.000	NA		NA
569377	569378	PMT2233	PMT2234	ureD	ureA	TRUE	0.924	19.000	0.664	0.003	N	NA
569378	569379	PMT2234	PMT2235	ureA	ureB	TRUE	0.967	10.000	0.595	0.001	Y	NA
569379	569380	PMT2235	PMT2236	ureB	ureC	TRUE	0.968	37.000	0.486	0.001	Y	NA
569381	569382	PMT2237	PMT2238	cobA		TRUE	0.958	-3.000	0.318	1.000		NA
1295569	1295512					FALSE	0.344	26.000	0.000	NA		NA
569383	1204337	PMT2239		nirA		TRUE	0.770	53.000	0.139	NA		NA
1204337	569384		PMT2240		focA	FALSE	0.576	68.000	0.049	NA		NA
569384	569385	PMT2240	PMT2241	focA		FALSE	0.635	13.000	0.039	1.000		NA
569388	569389	PMT2244	PMT2245		ppk	TRUE	0.917	43.000	0.037	1.000	Y	NA
569389	569390	PMT2245	PMT2246	ppk		FALSE	0.065	209.000	0.019	1.000	N	NA
569390	569391	PMT2246	PMT2247		SEC59	TRUE	0.886	9.000	0.292	1.000	N	NA
569393	569394	PMT2249	PMT2250	acnB	eriC	FALSE	0.685	-16.000	0.062	1.000	N	NA
569394	569395	PMT2250	PMT2251	eriC		FALSE	0.033	459.000	0.089	1.000	N	NA
569396	569397	PMT2252	PMT2253		purU	FALSE	0.640	15.000	0.050	1.000		NA
569400	569401	PMT2256	PMT2257		aroE	FALSE	0.396	77.000	0.021	NA		NA
569401	569402	PMT2257	PMT2258	aroE		TRUE	0.712	25.000	0.126	NA		NA
569402	569403	PMT2258	PMT2259		rps6	FALSE	0.313	78.000	0.012	NA		NA
569403	569404	PMT2259	PMT2260	rps6		FALSE	0.501	45.000	0.010	NA		NA
569405	569406	PMT2261	PMT2262	argG		TRUE	0.729	0.000	0.000	NA		NA
569407	569408	PMT2263	PMT2264		mraY	FALSE	0.581	62.000	0.027	NA		NA
569408	569409	PMT2264	PMT2265	mraY		FALSE	0.242	97.000	0.000	0.033		NA
569410	569411	PMT2266	PMT2267		purT	FALSE	0.199	81.000	0.000	NA		NA
569412	569413	PMT2268	PMT2269	sps		FALSE	0.032	259.000	0.031	1.000		NA
569413	569414	PMT2269	PMT2270		uvrA	TRUE	0.848	0.000	0.011	1.000		NA
569414	569415	PMT2270	PMT2271	uvrA	recN	TRUE	0.920	46.000	0.021	0.061	Y	NA
569416	569417	PMT2272	PMT2273			TRUE	0.857	25.000	0.452	NA		NA
569417	569418	PMT2273	PMT2274		thrC	FALSE	0.664	40.000	0.050	NA		NA
569418	567091	PMT2274	PMT0001	thrC	dnaN	FALSE	0.017	410.000	0.000	1.000	N	NA